Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07876.t1 | XP_013444432.1 | 92.6 | 353 | 15 | 3 | 1 | 347 | 58 | 405 | 4.00E-101 | 378.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07876.t1 | Q9SLL2 | 52.1 | 211 | 95 | 3 | 132 | 341 | 159 | 364 | 3.8e-36 | 153.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07876.t1 | A0A072TM26 | 92.6 | 353 | 15 | 3 | 1 | 347 | 58 | 405 | 2.9e-101 | 378.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene07876 | 0.878099 | 3.69E-69 | -1.69E-46 |
| MS.gene049159 | MS.gene07876 | 0.82848 | 8.78E-55 | -1.69E-46 |
| MS.gene049254 | MS.gene07876 | 0.882806 | 7.65E-71 | -1.69E-46 |
| MS.gene049272 | MS.gene07876 | 0.826679 | 2.38E-54 | -1.69E-46 |
| MS.gene049343 | MS.gene07876 | 0.822263 | 2.60E-53 | -1.69E-46 |
| MS.gene049350 | MS.gene07876 | 0.852739 | 3.79E-61 | -1.69E-46 |
| MS.gene049368 | MS.gene07876 | 0.817998 | 2.46E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene07876 | 0.829455 | 5.10E-55 | -1.69E-46 |
| MS.gene049499 | MS.gene07876 | 0.802116 | 6.53E-49 | -1.69E-46 |
| MS.gene049584 | MS.gene07876 | 0.812906 | 3.35E-51 | -1.69E-46 |
| MS.gene049585 | MS.gene07876 | 0.803622 | 3.19E-49 | -1.69E-46 |
| MS.gene049647 | MS.gene07876 | 0.801078 | 1.07E-48 | -1.69E-46 |
| MS.gene049711 | MS.gene07876 | 0.878697 | 2.28E-69 | -1.69E-46 |
| MS.gene049807 | MS.gene07876 | 0.821324 | 4.29E-53 | -1.69E-46 |
| MS.gene049825 | MS.gene07876 | 0.811474 | 6.87E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene07876 | 0.850455 | 1.68E-60 | -1.69E-46 |
| MS.gene049873 | MS.gene07876 | 0.801643 | 8.18E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene07876 | 0.822589 | 2.19E-53 | -1.69E-46 |
| MS.gene050026 | MS.gene07876 | 0.820125 | 8.09E-53 | -1.69E-46 |
| MS.gene050137 | MS.gene07876 | 0.804614 | 1.99E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene07876 | 0.831368 | 1.74E-55 | -1.69E-46 |
| MS.gene050201 | MS.gene07876 | 0.803133 | 4.03E-49 | -1.69E-46 |
| MS.gene050221 | MS.gene07876 | 0.80296 | 4.38E-49 | -1.69E-46 |
| MS.gene050251 | MS.gene07876 | 0.814307 | 1.65E-51 | -1.69E-46 |
| MS.gene050273 | MS.gene07876 | 0.826707 | 2.34E-54 | -1.69E-46 |
| MS.gene050355 | MS.gene07876 | 0.823445 | 1.38E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene07876 | 0.836751 | 7.79E-57 | -1.69E-46 |
| MS.gene050561 | MS.gene07876 | 0.837363 | 5.43E-57 | -1.69E-46 |
| MS.gene050562 | MS.gene07876 | 0.824821 | 6.56E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene07876 | 0.810767 | 9.79E-51 | -1.69E-46 |
| MS.gene050826 | MS.gene07876 | 0.806687 | 7.29E-50 | -1.69E-46 |
| MS.gene050844 | MS.gene07876 | 0.814162 | 1.77E-51 | -1.69E-46 |
| MS.gene051018 | MS.gene07876 | 0.808381 | 3.19E-50 | -1.69E-46 |
| MS.gene051181 | MS.gene07876 | 0.820617 | 6.24E-53 | -1.69E-46 |
| MS.gene051190 | MS.gene07876 | 0.824958 | 6.09E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene07876 | 0.821118 | 4.78E-53 | -1.69E-46 |
| MS.gene051201 | MS.gene07876 | 0.831743 | 1.40E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene07876 | 0.840927 | 6.47E-58 | -1.69E-46 |
| MS.gene051279 | MS.gene07876 | 0.851783 | 7.09E-61 | -1.69E-46 |
| MS.gene051332 | MS.gene07876 | 0.830876 | 2.29E-55 | -1.69E-46 |
| MS.gene051363 | MS.gene07876 | 0.812035 | 5.19E-51 | -1.69E-46 |
| MS.gene051388 | MS.gene07876 | 0.811862 | 5.66E-51 | -1.69E-46 |
| MS.gene051594 | MS.gene07876 | 0.824272 | 8.83E-54 | -1.69E-46 |
| MS.gene051628 | MS.gene07876 | 0.808812 | 2.58E-50 | -1.69E-46 |
| MS.gene051700 | MS.gene07876 | 0.813179 | 2.92E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene07876 | 0.881089 | 3.21E-70 | -1.69E-46 |
| MS.gene051720 | MS.gene07876 | 0.861787 | 8.03E-64 | -1.69E-46 |
| MS.gene051744 | MS.gene07876 | 0.868495 | 6.26E-66 | -1.69E-46 |
| MS.gene051800 | MS.gene07876 | 0.815232 | 1.03E-51 | -1.69E-46 |
| MS.gene051957 | MS.gene07876 | 0.83844 | 2.87E-57 | -1.69E-46 |
| MS.gene052012 | MS.gene07876 | 0.805685 | 1.18E-49 | -1.69E-46 |
| MS.gene052037 | MS.gene07876 | 0.801908 | 7.21E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene07876 | 0.814956 | 1.18E-51 | -1.69E-46 |
| MS.gene052333 | MS.gene07876 | 0.810393 | 1.18E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene07876 | 0.860381 | 2.15E-63 | -1.69E-46 |
| MS.gene052516 | MS.gene07876 | 0.851567 | 8.16E-61 | -1.69E-46 |
| MS.gene052519 | MS.gene07876 | 0.872087 | 4.16E-67 | -1.69E-46 |
| MS.gene052534 | MS.gene07876 | 0.827992 | 1.15E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene07876 | 0.847881 | 8.74E-60 | -1.69E-46 |
| MS.gene052584 | MS.gene07876 | 0.857311 | 1.78E-62 | -1.69E-46 |
| MS.gene052586 | MS.gene07876 | 0.801223 | 9.96E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene07876 | 0.818493 | 1.90E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene07876 | -0.806491 | 8.02E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene07876 | 0.86032 | 2.24E-63 | -1.69E-46 |
| MS.gene052790 | MS.gene07876 | 0.807604 | 4.66E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene07876 | 0.85126 | 9.96E-61 | -1.69E-46 |
| MS.gene052867 | MS.gene07876 | 0.804047 | 2.61E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene07876 | 0.818073 | 2.37E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene07876 | 0.804388 | 2.21E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene07876 | 0.822138 | 2.78E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene07876 | 0.818906 | 1.54E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene07876 | 0.816953 | 4.24E-52 | -1.69E-46 |
| MS.gene053164 | MS.gene07876 | 0.809878 | 1.52E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene07876 | 0.828267 | 9.89E-55 | -1.69E-46 |
| MS.gene053221 | MS.gene07876 | 0.805751 | 1.15E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene07876 | 0.883115 | 5.89E-71 | -1.69E-46 |
| MS.gene053272 | MS.gene07876 | -0.812793 | 3.55E-51 | -1.69E-46 |
| MS.gene053321 | MS.gene07876 | 0.800894 | 1.16E-48 | -1.69E-46 |
| MS.gene05350 | MS.gene07876 | 0.818659 | 1.75E-52 | -1.69E-46 |
| MS.gene053599 | MS.gene07876 | 0.812473 | 4.16E-51 | -1.69E-46 |
| MS.gene053621 | MS.gene07876 | 0.819448 | 1.16E-52 | -1.69E-46 |
| MS.gene05364 | MS.gene07876 | 0.815292 | 9.96E-52 | -1.69E-46 |
| MS.gene05365 | MS.gene07876 | 0.801873 | 7.33E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene07876 | 0.807522 | 4.85E-50 | -1.69E-46 |
| MS.gene053998 | MS.gene07876 | 0.806656 | 7.40E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene07876 | 0.819199 | 1.32E-52 | -1.69E-46 |
| MS.gene05422 | MS.gene07876 | 0.823517 | 1.33E-53 | -1.69E-46 |
| MS.gene054236 | MS.gene07876 | 0.823885 | 1.09E-53 | -1.69E-46 |
| MS.gene05423 | MS.gene07876 | 0.841822 | 3.76E-58 | -1.69E-46 |
| MS.gene054291 | MS.gene07876 | -0.842144 | 3.09E-58 | -1.69E-46 |
| MS.gene054467 | MS.gene07876 | 0.823435 | 1.39E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene07876 | 0.834497 | 2.90E-56 | -1.69E-46 |
| MS.gene054576 | MS.gene07876 | 0.826766 | 2.27E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene07876 | 0.813247 | 2.82E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene07876 | 0.854544 | 1.15E-61 | -1.69E-46 |
| MS.gene054651 | MS.gene07876 | 0.879374 | 1.31E-69 | -1.69E-46 |
| MS.gene054775 | MS.gene07876 | 0.867108 | 1.75E-65 | -1.69E-46 |
| MS.gene054801 | MS.gene07876 | 0.807714 | 4.42E-50 | -1.69E-46 |
| MS.gene054991 | MS.gene07876 | 0.862941 | 3.55E-64 | -1.69E-46 |
| MS.gene055083 | MS.gene07876 | 0.809721 | 1.64E-50 | -1.69E-46 |
| MS.gene055144 | MS.gene07876 | 0.814123 | 1.81E-51 | -1.69E-46 |
| MS.gene055166 | MS.gene07876 | 0.822654 | 2.11E-53 | -1.69E-46 |
| MS.gene055227 | MS.gene07876 | 0.836971 | 6.84E-57 | -1.69E-46 |
| MS.gene055228 | MS.gene07876 | 0.834755 | 2.49E-56 | -1.69E-46 |
| MS.gene055464 | MS.gene07876 | 0.800132 | 1.66E-48 | -1.69E-46 |
| MS.gene055465 | MS.gene07876 | 0.840629 | 7.75E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene07876 | 0.847776 | 9.34E-60 | -1.69E-46 |
| MS.gene055468 | MS.gene07876 | 0.827113 | 1.87E-54 | -1.69E-46 |
| MS.gene055512 | MS.gene07876 | 0.818447 | 1.95E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene07876 | 0.833704 | 4.58E-56 | -1.69E-46 |
| MS.gene055537 | MS.gene07876 | 0.808534 | 2.95E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene07876 | -0.810076 | 1.38E-50 | -1.69E-46 |
| MS.gene055586 | MS.gene07876 | 0.85477 | 9.87E-62 | -1.69E-46 |
| MS.gene055589 | MS.gene07876 | 0.825405 | 4.77E-54 | -1.69E-46 |
| MS.gene055694 | MS.gene07876 | 0.810998 | 8.72E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene07876 | 0.835773 | 1.38E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene07876 | 0.864019 | 1.64E-64 | -1.69E-46 |
| MS.gene055841 | MS.gene07876 | 0.805767 | 1.14E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene07876 | 0.838804 | 2.31E-57 | -1.69E-46 |
| MS.gene056005 | MS.gene07876 | 0.817759 | 2.79E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene07876 | 0.841939 | 3.50E-58 | -1.69E-46 |
| MS.gene056050 | MS.gene07876 | 0.852055 | 5.93E-61 | -1.69E-46 |
| MS.gene056162 | MS.gene07876 | 0.81485 | 1.25E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene07876 | 0.800671 | 1.29E-48 | -1.69E-46 |
| MS.gene056174 | MS.gene07876 | 0.840536 | 8.20E-58 | -1.69E-46 |
| MS.gene056252 | MS.gene07876 | 0.800165 | 1.64E-48 | -1.69E-46 |
| MS.gene056308 | MS.gene07876 | 0.835931 | 1.26E-56 | -1.69E-46 |
| MS.gene056366 | MS.gene07876 | 0.843735 | 1.17E-58 | -1.69E-46 |
| MS.gene056373 | MS.gene07876 | 0.804455 | 2.14E-49 | -1.69E-46 |
| MS.gene056424 | MS.gene07876 | 0.80841 | 3.14E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene07876 | 0.806725 | 7.15E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene07876 | 0.817473 | 3.24E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene07876 | 0.848513 | 5.84E-60 | -1.69E-46 |
| MS.gene056699 | MS.gene07876 | 0.811444 | 6.98E-51 | -1.69E-46 |
| MS.gene056776 | MS.gene07876 | 0.813148 | 2.96E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene07876 | 0.800972 | 1.12E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene07876 | 0.850487 | 1.64E-60 | -1.69E-46 |
| MS.gene05690 | MS.gene07876 | 0.819305 | 1.25E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene07876 | 0.84173 | 3.98E-58 | -1.69E-46 |
| MS.gene057034 | MS.gene07876 | 0.805396 | 1.36E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene07876 | 0.804801 | 1.81E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene07876 | 0.829087 | 6.26E-55 | -1.69E-46 |
| MS.gene057132 | MS.gene07876 | 0.828032 | 1.13E-54 | -1.69E-46 |
| MS.gene057208 | MS.gene07876 | 0.850289 | 1.87E-60 | -1.69E-46 |
| MS.gene057294 | MS.gene07876 | 0.808377 | 3.19E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene07876 | 0.81341 | 2.60E-51 | -1.69E-46 |
| MS.gene057324 | MS.gene07876 | 0.810761 | 9.81E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene07876 | 0.828612 | 8.16E-55 | -1.69E-46 |
| MS.gene057598 | MS.gene07876 | 0.843318 | 1.51E-58 | -1.69E-46 |
| MS.gene057611 | MS.gene07876 | 0.818455 | 1.94E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene07876 | 0.823903 | 1.08E-53 | -1.69E-46 |
| MS.gene057855 | MS.gene07876 | 0.805613 | 1.23E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene07876 | 0.844995 | 5.35E-59 | -1.69E-46 |
| MS.gene057921 | MS.gene07876 | 0.829688 | 4.48E-55 | -1.69E-46 |
| MS.gene058009 | MS.gene07876 | 0.808389 | 3.17E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene07876 | 0.820133 | 8.06E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene07876 | 0.809953 | 1.47E-50 | -1.69E-46 |
| MS.gene058294 | MS.gene07876 | 0.803337 | 3.66E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene07876 | 0.820646 | 6.14E-53 | -1.69E-46 |
| MS.gene05847 | MS.gene07876 | 0.811545 | 6.64E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene07876 | 0.89196 | 2.46E-74 | -1.69E-46 |
| MS.gene058781 | MS.gene07876 | 0.801878 | 7.31E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene07876 | 0.827955 | 1.18E-54 | -1.69E-46 |
| MS.gene058829 | MS.gene07876 | 0.827543 | 1.48E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene07876 | 0.838825 | 2.28E-57 | -1.69E-46 |
| MS.gene05897 | MS.gene07876 | 0.839397 | 1.62E-57 | -1.69E-46 |
| MS.gene059015 | MS.gene07876 | 0.807533 | 4.83E-50 | -1.69E-46 |
| MS.gene059272 | MS.gene07876 | 0.828205 | 1.02E-54 | -1.69E-46 |
| MS.gene059283 | MS.gene07876 | 0.800096 | 1.69E-48 | -1.69E-46 |
| MS.gene059438 | MS.gene07876 | 0.808937 | 2.42E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene07876 | 0.831057 | 2.07E-55 | -1.69E-46 |
| MS.gene05954 | MS.gene07876 | 0.800372 | 1.49E-48 | -1.69E-46 |
| MS.gene059570 | MS.gene07876 | 0.832203 | 1.08E-55 | -1.69E-46 |
| MS.gene059584 | MS.gene07876 | 0.815162 | 1.06E-51 | -1.69E-46 |
| MS.gene059601 | MS.gene07876 | 0.806357 | 8.56E-50 | -1.69E-46 |
| MS.gene059602 | MS.gene07876 | 0.80433 | 2.28E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene07876 | 0.848488 | 5.94E-60 | -1.69E-46 |
| MS.gene059725 | MS.gene07876 | 0.811533 | 6.68E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene07876 | 0.824857 | 6.43E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene07876 | -0.809173 | 2.16E-50 | -1.69E-46 |
| MS.gene059935 | MS.gene07876 | 0.802399 | 5.71E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene07876 | 0.813891 | 2.03E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene07876 | 0.802809 | 4.70E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene07876 | 0.803935 | 2.75E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene07876 | 0.842693 | 2.21E-58 | -1.69E-46 |
| MS.gene060352 | MS.gene07876 | 0.805463 | 1.32E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene07876 | 0.80725 | 5.54E-50 | -1.69E-46 |
| MS.gene060373 | MS.gene07876 | 0.803147 | 4.00E-49 | -1.69E-46 |
| MS.gene060519 | MS.gene07876 | 0.825618 | 4.25E-54 | -1.69E-46 |
| MS.gene060521 | MS.gene07876 | 0.822964 | 1.79E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene07876 | 0.839833 | 1.25E-57 | -1.69E-46 |
| MS.gene060587 | MS.gene07876 | 0.811632 | 6.35E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene07876 | 0.807032 | 6.16E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene07876 | 0.806525 | 7.89E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene07876 | 0.837716 | 4.41E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene07876 | 0.825603 | 4.28E-54 | -1.69E-46 |
| MS.gene06094 | MS.gene07876 | 0.803594 | 3.24E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene07876 | 0.808056 | 3.74E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene07876 | 0.819775 | 9.73E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07876.t1 | MTR_8g019660 | 93.201 | 353 | 13 | 3 | 1 | 347 | 58 | 405 | 0.0 | 561 |
| MS.gene07876.t1 | MTR_3g104880 | 42.960 | 277 | 109 | 10 | 73 | 341 | 136 | 371 | 1.91e-39 | 143 |
| MS.gene07876.t1 | MTR_4g125620 | 37.644 | 348 | 139 | 14 | 10 | 347 | 65 | 344 | 4.28e-28 | 112 |
| MS.gene07876.t1 | MTR_1g015275 | 39.373 | 287 | 110 | 8 | 67 | 333 | 123 | 365 | 4.26e-22 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07876.t1 | AT3G13980 | 51.636 | 275 | 88 | 10 | 78 | 347 | 123 | 357 | 2.70e-64 | 208 |
| MS.gene07876.t1 | AT1G54200 | 48.175 | 274 | 112 | 9 | 76 | 342 | 115 | 365 | 1.82e-54 | 182 |
| MS.gene07876.t1 | AT3G42800 | 37.719 | 228 | 111 | 13 | 125 | 347 | 140 | 341 | 2.62e-25 | 104 |
| MS.gene07876.t1 | AT5G12050 | 39.726 | 219 | 98 | 9 | 134 | 333 | 153 | 356 | 9.22e-12 | 65.9 |
Find 43 sgRNAs with CRISPR-Local
Find 55 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGATAATTTATCAGTAAT+TGG | 0.114503 | 8.3:-70967905 | MS.gene07876:CDS |
| TTCAATCCCAATAGAGTTAT+TGG | 0.119420 | 8.3:-70967836 | MS.gene07876:CDS |
| ATGTGATGCAAGAGAGTTTA+AGG | 0.174902 | 8.3:-70968060 | MS.gene07876:CDS |
| ACCATTTCCAATAACTCTAT+TGG | 0.241032 | 8.3:+70967829 | None:intergenic |
| TCAGAAACACTAGTTCTAAT+TGG | 0.278598 | 8.3:+70968595 | None:intergenic |
| AACATTGATTCATTTCAATA+TGG | 0.291124 | 8.3:-70968565 | MS.gene07876:CDS |
| AACTACTACAAATTCTGTTT+TGG | 0.296788 | 8.3:-70968314 | MS.gene07876:CDS |
| TCTGATTCAGAATCATTCTA+TGG | 0.300272 | 8.3:-70968634 | MS.gene07876:CDS |
| ACACTAGTTCTAATTGGTTT+TGG | 0.307037 | 8.3:+70968601 | None:intergenic |
| CCCAATAGAGTTATTGGAAA+TGG | 0.315105 | 8.3:-70967830 | MS.gene07876:CDS |
| CCATTTCCAATAACTCTATT+GGG | 0.327955 | 8.3:+70967830 | None:intergenic |
| AAGCAAGAAAGGTGGAGAAT+TGG | 0.331562 | 8.3:-70968792 | MS.gene07876:CDS |
| GAACAGAATGGTTATGGTTA+AGG | 0.337246 | 8.3:+70968530 | None:intergenic |
| AAATGAGTAGTTTCATAAAC+TGG | 0.342032 | 8.3:+70967857 | None:intergenic |
| TGGATAATTTATCAGTAATT+GGG | 0.347307 | 8.3:-70967904 | MS.gene07876:CDS |
| GAGTTTGAACAGAATGGTTA+TGG | 0.352789 | 8.3:+70968524 | None:intergenic |
| TATTGAAATGAATCAATGTT+TGG | 0.355365 | 8.3:+70968568 | None:intergenic |
| TCATCAACAATAACACTAAC+AGG | 0.374723 | 8.3:+70968178 | None:intergenic |
| ATACAAAATTCTCAAGGCTT+TGG | 0.374949 | 8.3:+70968462 | None:intergenic |
| AGAGTAGTAGTGAAGAATTA+AGG | 0.394514 | 8.3:-70968087 | MS.gene07876:CDS |
| GAATTTGCATGAAGGTGAAA+AGG | 0.410666 | 8.3:-70968131 | MS.gene07876:CDS |
| TAGTTCTGATTTGTTTGAAT+TGG | 0.413467 | 8.3:-70967924 | MS.gene07876:CDS |
| TCTTGTTTCAAATTCTGTTA+AGG | 0.414977 | 8.3:+70968741 | None:intergenic |
| TATCAGTAATTGGGATTGAA+AGG | 0.444002 | 8.3:-70967895 | MS.gene07876:CDS |
| TTAGCACCTGATCTTGATGA+AGG | 0.453605 | 8.3:+70968220 | None:intergenic |
| TTATTGTTGATGAAGATTGT+AGG | 0.478035 | 8.3:-70968168 | MS.gene07876:CDS |
| AAAACTCCTTCATCAAGATC+AGG | 0.481984 | 8.3:-70968226 | MS.gene07876:CDS |
| AAGGGTTCTTCAATATATGA+TGG | 0.489828 | 8.3:-70968112 | MS.gene07876:CDS |
| TCTTCAGAATCAAGTTCAGC+TGG | 0.492878 | 8.3:-70968670 | MS.gene07876:CDS |
| AATTTGCATGAAGGTGAAAA+GGG | 0.494062 | 8.3:-70968130 | MS.gene07876:CDS |
| TGCAAATTCTTGTGTCCACA+TGG | 0.508348 | 8.3:+70968145 | None:intergenic |
| AAACTTCAGAAAAGCAAGAA+AGG | 0.514735 | 8.3:-70968803 | MS.gene07876:CDS |
| TGTGATGCAAGAGAGTTTAA+GGG | 0.547284 | 8.3:-70968059 | MS.gene07876:CDS |
| GATGAAGATGAAGATGATGA+TGG | 0.547702 | 8.3:-70967959 | MS.gene07876:CDS |
| AGAAGATGAACTTGAATGCA+AGG | 0.550199 | 8.3:+70968690 | None:intergenic |
| TGGAATGAGAAAGTTGTGAA+TGG | 0.552681 | 8.3:-70968772 | MS.gene07876:CDS |
| ATCACCATACAAAATTCTCA+AGG | 0.600006 | 8.3:+70968456 | None:intergenic |
| TCAGAATCAAGTTCAGCTGG+TGG | 0.600576 | 8.3:-70968667 | MS.gene07876:CDS |
| CTTCAGAAAAGCAAGAAAGG+TGG | 0.635352 | 8.3:-70968800 | MS.gene07876:CDS |
| ACAAAGCAACCTATTTCACC+TGG | 0.653006 | 8.3:-70968424 | MS.gene07876:CDS |
| GGACACAAGAATTTGCATGA+AGG | 0.715993 | 8.3:-70968139 | MS.gene07876:CDS |
| GATGAAGATTGTAGGCCATG+TGG | 0.719882 | 8.3:-70968160 | MS.gene07876:CDS |
| CAGGTGCTAAAAGATCAGTG+AGG | 0.837686 | 8.3:-70968207 | MS.gene07876:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTGAAATGAATCAATGTT+TGG | + | chr8.3:70968090-70968109 | None:intergenic | 20.0% |
| !! | TGGATAATTTATCAGTAATT+GGG | - | chr8.3:70968751-70968770 | MS.gene07876:CDS | 20.0% |
| !! | TTGGATAATTTATCAGTAAT+TGG | - | chr8.3:70968750-70968769 | MS.gene07876:CDS | 20.0% |
| !!! | AACATTGATTCATTTCAATA+TGG | - | chr8.3:70968090-70968109 | MS.gene07876:CDS | 20.0% |
| !!! | TGATGGTATTTTTGATTTTT+TGG | + | chr8.3:70968307-70968326 | None:intergenic | 20.0% |
| ! | AAATGAGTAGTTTCATAAAC+TGG | + | chr8.3:70968801-70968820 | None:intergenic | 25.0% |
| ! | CAAAAACCAAAAAATGAGAA+TGG | - | chr8.3:70968153-70968172 | MS.gene07876:CDS | 25.0% |
| !! | AACTACTACAAATTCTGTTT+TGG | - | chr8.3:70968341-70968360 | MS.gene07876:CDS | 25.0% |
| !! | TCTTGTTTCAAATTCTGTTA+AGG | + | chr8.3:70967917-70967936 | None:intergenic | 25.0% |
| !! | TTATTGTTGATGAAGATTGT+AGG | - | chr8.3:70968487-70968506 | MS.gene07876:CDS | 25.0% |
| !!! | AATTCACTTTTCAATTCTAG+TGG | - | chr8.3:70968276-70968295 | MS.gene07876:CDS | 25.0% |
| !!! | TAGTTCTGATTTGTTTGAAT+TGG | - | chr8.3:70968731-70968750 | MS.gene07876:CDS | 25.0% |
| AAACTTCAGAAAAGCAAGAA+AGG | - | chr8.3:70967852-70967871 | MS.gene07876:CDS | 30.0% | |
| AAGGGTTCTTCAATATATGA+TGG | - | chr8.3:70968543-70968562 | MS.gene07876:CDS | 30.0% | |
| AATTTGCATGAAGGTGAAAA+GGG | - | chr8.3:70968525-70968544 | MS.gene07876:CDS | 30.0% | |
| ACCATTTCCAATAACTCTAT+TGG | + | chr8.3:70968829-70968848 | None:intergenic | 30.0% | |
| AGAGTAGTAGTGAAGAATTA+AGG | - | chr8.3:70968568-70968587 | MS.gene07876:CDS | 30.0% | |
| ATACAAAATTCTCAAGGCTT+TGG | + | chr8.3:70968196-70968215 | None:intergenic | 30.0% | |
| ATCACCATACAAAATTCTCA+AGG | + | chr8.3:70968202-70968221 | None:intergenic | 30.0% | |
| CCAAAAAATGAGAATGGTTT+AGG | - | chr8.3:70968159-70968178 | MS.gene07876:CDS | 30.0% | |
| CCATTTCCAATAACTCTATT+GGG | + | chr8.3:70968828-70968847 | None:intergenic | 30.0% | |
| TATCAGTAATTGGGATTGAA+AGG | - | chr8.3:70968760-70968779 | MS.gene07876:CDS | 30.0% | |
| TCATCAACAATAACACTAAC+AGG | + | chr8.3:70968480-70968499 | None:intergenic | 30.0% | |
| TCTGATTCAGAATCATTCTA+TGG | - | chr8.3:70968021-70968040 | MS.gene07876:CDS | 30.0% | |
| TTCAATCCCAATAGAGTTAT+TGG | - | chr8.3:70968819-70968838 | MS.gene07876:CDS | 30.0% | |
| ! | AAAGCCTTGAGAATTTTGTA+TGG | - | chr8.3:70968195-70968214 | MS.gene07876:CDS | 30.0% |
| !! | TCAGAAACACTAGTTCTAAT+TGG | + | chr8.3:70968063-70968082 | None:intergenic | 30.0% |
| !!! | ACACTAGTTCTAATTGGTTT+TGG | + | chr8.3:70968057-70968076 | None:intergenic | 30.0% |
| !!! | CCTAAACCATTCTCATTTTT+TGG | + | chr8.3:70968162-70968181 | None:intergenic | 30.0% |
| !!! | GTTTTTGAGTTTGAACAGAA+TGG | + | chr8.3:70968140-70968159 | None:intergenic | 30.0% |
| !!! | TTTCTTGCTTTTCTGAAGTT+TGG | + | chr8.3:70967853-70967872 | None:intergenic | 30.0% |
| AAAACTCCTTCATCAAGATC+AGG | - | chr8.3:70968429-70968448 | MS.gene07876:CDS | 35.0% | |
| AGAAGATGAACTTGAATGCA+AGG | + | chr8.3:70967968-70967987 | None:intergenic | 35.0% | |
| ATGTGATGCAAGAGAGTTTA+AGG | - | chr8.3:70968595-70968614 | MS.gene07876:CDS | 35.0% | |
| CCCAATAGAGTTATTGGAAA+TGG | - | chr8.3:70968825-70968844 | MS.gene07876:CDS | 35.0% | |
| GAACAGAATGGTTATGGTTA+AGG | + | chr8.3:70968128-70968147 | None:intergenic | 35.0% | |
| GAATTTGCATGAAGGTGAAA+AGG | - | chr8.3:70968524-70968543 | MS.gene07876:CDS | 35.0% | |
| GAGTTTGAACAGAATGGTTA+TGG | + | chr8.3:70968134-70968153 | None:intergenic | 35.0% | |
| GATGAAGATGAAGATGATGA+TGG | - | chr8.3:70968696-70968715 | MS.gene07876:CDS | 35.0% | |
| TGGAATGAGAAAGTTGTGAA+TGG | - | chr8.3:70967883-70967902 | MS.gene07876:CDS | 35.0% | |
| TGTGATGCAAGAGAGTTTAA+GGG | - | chr8.3:70968596-70968615 | MS.gene07876:CDS | 35.0% | |
| ! | ATTTTTGCACCAGGTGAAAT+AGG | + | chr8.3:70968243-70968262 | None:intergenic | 35.0% |
| !! | CATCAGTGTCTTCTTTTTCA+AGG | - | chr8.3:70968394-70968413 | MS.gene07876:CDS | 35.0% |
| !! | GTTTTTGTAGCTGTTGATGA+TGG | + | chr8.3:70968324-70968343 | None:intergenic | 35.0% |
| AAGCAAGAAAGGTGGAGAAT+TGG | - | chr8.3:70967863-70967882 | MS.gene07876:CDS | 40.0% | |
| ACAAAGCAACCTATTTCACC+TGG | - | chr8.3:70968231-70968250 | MS.gene07876:CDS | 40.0% | |
| CTTCAGAAAAGCAAGAAAGG+TGG | - | chr8.3:70967855-70967874 | MS.gene07876:CDS | 40.0% | |
| GGACACAAGAATTTGCATGA+AGG | - | chr8.3:70968516-70968535 | MS.gene07876:CDS | 40.0% | |
| TCTTCAGAATCAAGTTCAGC+TGG | - | chr8.3:70967985-70968004 | MS.gene07876:CDS | 40.0% | |
| TGCAAATTCTTGTGTCCACA+TGG | + | chr8.3:70968513-70968532 | None:intergenic | 40.0% | |
| TTAGCACCTGATCTTGATGA+AGG | + | chr8.3:70968438-70968457 | None:intergenic | 40.0% | |
| ! | AAGCTAGCAATTTTTGCACC+AGG | + | chr8.3:70968252-70968271 | None:intergenic | 40.0% |
| CAGGTGCTAAAAGATCAGTG+AGG | - | chr8.3:70968448-70968467 | MS.gene07876:CDS | 45.0% | |
| GATGAAGATTGTAGGCCATG+TGG | - | chr8.3:70968495-70968514 | MS.gene07876:CDS | 45.0% | |
| TCAGAATCAAGTTCAGCTGG+TGG | - | chr8.3:70967988-70968007 | MS.gene07876:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 70967817 | 70968860 | 70967817 | ID=MS.gene07876 |
| chr8.3 | mRNA | 70967817 | 70968860 | 70967817 | ID=MS.gene07876.t1;Parent=MS.gene07876 |
| chr8.3 | exon | 70967817 | 70968860 | 70967817 | ID=MS.gene07876.t1.exon1;Parent=MS.gene07876.t1 |
| chr8.3 | CDS | 70967817 | 70968860 | 70967817 | ID=cds.MS.gene07876.t1;Parent=MS.gene07876.t1 |
| Gene Sequence |
| Protein sequence |
