Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58802.t1 | AES96447.2 | 75.7 | 333 | 77 | 1 | 1 | 333 | 1 | 329 | 1.90E-68 | 269.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58802.t1 | G7K715 | 75.7 | 333 | 77 | 1 | 1 | 333 | 1 | 329 | 1.4e-68 | 269.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene58802 | 0.839281 | 1.74E-57 | -1.69E-46 |
| MS.gene049159 | MS.gene58802 | 0.819737 | 9.92E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene58802 | 0.862263 | 5.74E-64 | -1.69E-46 |
| MS.gene049272 | MS.gene58802 | 0.818223 | 2.19E-52 | -1.69E-46 |
| MS.gene049343 | MS.gene58802 | 0.82739 | 1.61E-54 | -1.69E-46 |
| MS.gene049404 | MS.gene58802 | 0.814588 | 1.43E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene58802 | 0.8238 | 1.14E-53 | -1.69E-46 |
| MS.gene049452 | MS.gene58802 | 0.821292 | 4.36E-53 | -1.69E-46 |
| MS.gene049501 | MS.gene58802 | 0.807878 | 4.08E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene58802 | 0.833342 | 5.63E-56 | -1.69E-46 |
| MS.gene049669 | MS.gene58802 | 0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene58802 | 0.833226 | 6.02E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene58802 | 0.83954 | 1.49E-57 | -1.69E-46 |
| MS.gene049958 | MS.gene58802 | 0.824056 | 9.93E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene58802 | 0.803179 | 3.94E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene58802 | 0.833749 | 4.46E-56 | -1.69E-46 |
| MS.gene050137 | MS.gene58802 | 0.811785 | 5.88E-51 | -1.69E-46 |
| MS.gene050156 | MS.gene58802 | 0.827019 | 1.97E-54 | -1.69E-46 |
| MS.gene050221 | MS.gene58802 | 0.812904 | 3.35E-51 | -1.69E-46 |
| MS.gene050287 | MS.gene58802 | -0.808275 | 3.36E-50 | -1.69E-46 |
| MS.gene050355 | MS.gene58802 | 0.828295 | 9.74E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene58802 | 0.839252 | 1.77E-57 | -1.69E-46 |
| MS.gene05045 | MS.gene58802 | 0.813184 | 2.91E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene58802 | 0.822374 | 2.45E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene58802 | 0.825479 | 4.58E-54 | -1.69E-46 |
| MS.gene050562 | MS.gene58802 | 0.821153 | 4.70E-53 | -1.69E-46 |
| MS.gene050657 | MS.gene58802 | 0.817317 | 3.51E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene58802 | 0.850684 | 1.45E-60 | -1.69E-46 |
| MS.gene050780 | MS.gene58802 | 0.8183 | 2.11E-52 | -1.69E-46 |
| MS.gene050826 | MS.gene58802 | 0.802216 | 6.23E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene58802 | 0.821908 | 3.14E-53 | -1.69E-46 |
| MS.gene050962 | MS.gene58802 | 0.841511 | 4.54E-58 | -1.69E-46 |
| MS.gene051181 | MS.gene58802 | 0.811272 | 7.61E-51 | -1.69E-46 |
| MS.gene051190 | MS.gene58802 | 0.813853 | 2.07E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene58802 | 0.827349 | 1.64E-54 | -1.69E-46 |
| MS.gene051210 | MS.gene58802 | 0.818042 | 2.41E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene58802 | 0.827333 | 1.66E-54 | -1.69E-46 |
| MS.gene051279 | MS.gene58802 | 0.842729 | 2.16E-58 | -1.69E-46 |
| MS.gene051307 | MS.gene58802 | 0.802523 | 5.39E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene58802 | 0.83736 | 5.44E-57 | -1.69E-46 |
| MS.gene051490 | MS.gene58802 | 0.835306 | 1.81E-56 | -1.69E-46 |
| MS.gene051492 | MS.gene58802 | 0.82306 | 1.70E-53 | -1.69E-46 |
| MS.gene051574 | MS.gene58802 | 0.801287 | 9.67E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene58802 | 0.801429 | 9.04E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene58802 | 0.810831 | 9.48E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene58802 | 0.804902 | 1.73E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene58802 | 0.885317 | 9.02E-72 | -1.69E-46 |
| MS.gene051800 | MS.gene58802 | 0.824815 | 6.58E-54 | -1.69E-46 |
| MS.gene05191 | MS.gene58802 | 0.807238 | 5.57E-50 | -1.69E-46 |
| MS.gene051935 | MS.gene58802 | 0.805862 | 1.09E-49 | -1.69E-46 |
| MS.gene051957 | MS.gene58802 | 0.818342 | 2.06E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene58802 | 0.801584 | 8.41E-49 | -1.69E-46 |
| MS.gene052037 | MS.gene58802 | 0.811642 | 6.32E-51 | -1.69E-46 |
| MS.gene052042 | MS.gene58802 | 0.810485 | 1.13E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene58802 | 0.814606 | 1.41E-51 | -1.69E-46 |
| MS.gene052208 | MS.gene58802 | 0.812014 | 5.25E-51 | -1.69E-46 |
| MS.gene052333 | MS.gene58802 | 0.840353 | 9.15E-58 | -1.69E-46 |
| MS.gene052384 | MS.gene58802 | 0.804199 | 2.42E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene58802 | 0.83321 | 6.08E-56 | -1.69E-46 |
| MS.gene052493 | MS.gene58802 | 0.801405 | 9.14E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene58802 | 0.804765 | 1.85E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene58802 | 0.847549 | 1.08E-59 | -1.69E-46 |
| MS.gene052534 | MS.gene58802 | 0.82523 | 5.25E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene58802 | 0.858214 | 9.60E-63 | -1.69E-46 |
| MS.gene052584 | MS.gene58802 | 0.860504 | 1.97E-63 | -1.69E-46 |
| MS.gene052586 | MS.gene58802 | 0.821181 | 4.63E-53 | -1.69E-46 |
| MS.gene052685 | MS.gene58802 | 0.800802 | 1.21E-48 | -1.69E-46 |
| MS.gene052768 | MS.gene58802 | 0.805109 | 1.56E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene58802 | 0.857078 | 2.09E-62 | -1.69E-46 |
| MS.gene052790 | MS.gene58802 | 0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene58802 | 0.833348 | 5.62E-56 | -1.69E-46 |
| MS.gene052867 | MS.gene58802 | 0.810589 | 1.07E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene58802 | 0.811097 | 8.30E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene58802 | 0.801711 | 7.92E-49 | -1.69E-46 |
| MS.gene053145 | MS.gene58802 | 0.802572 | 5.27E-49 | -1.69E-46 |
| MS.gene053147 | MS.gene58802 | 0.809718 | 1.65E-50 | -1.69E-46 |
| MS.gene053164 | MS.gene58802 | 0.806357 | 8.55E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene58802 | 0.825265 | 5.15E-54 | -1.69E-46 |
| MS.gene053221 | MS.gene58802 | 0.800726 | 1.26E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene58802 | 0.857034 | 2.15E-62 | -1.69E-46 |
| MS.gene053296 | MS.gene58802 | 0.829501 | 4.97E-55 | -1.69E-46 |
| MS.gene05350 | MS.gene58802 | 0.805867 | 1.08E-49 | -1.69E-46 |
| MS.gene053621 | MS.gene58802 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene053641 | MS.gene58802 | 0.814482 | 1.51E-51 | -1.69E-46 |
| MS.gene053647 | MS.gene58802 | 0.846314 | 2.35E-59 | -1.69E-46 |
| MS.gene053966 | MS.gene58802 | 0.832146 | 1.12E-55 | -1.69E-46 |
| MS.gene053998 | MS.gene58802 | 0.801093 | 1.06E-48 | -1.69E-46 |
| MS.gene05410 | MS.gene58802 | 0.804 | 2.66E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene58802 | 0.849439 | 3.23E-60 | -1.69E-46 |
| MS.gene05415 | MS.gene58802 | 0.84786 | 8.85E-60 | -1.69E-46 |
| MS.gene05422 | MS.gene58802 | 0.801549 | 8.54E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene58802 | 0.833594 | 4.88E-56 | -1.69E-46 |
| MS.gene05423 | MS.gene58802 | 0.846424 | 2.19E-59 | -1.69E-46 |
| MS.gene054291 | MS.gene58802 | -0.849393 | 3.33E-60 | -1.69E-46 |
| MS.gene054467 | MS.gene58802 | 0.853875 | 1.79E-61 | -1.69E-46 |
| MS.gene054468 | MS.gene58802 | 0.853289 | 2.64E-61 | -1.69E-46 |
| MS.gene054472 | MS.gene58802 | 0.803258 | 3.80E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene58802 | 0.815172 | 1.06E-51 | -1.69E-46 |
| MS.gene054559 | MS.gene58802 | 0.803706 | 3.07E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene58802 | 0.843648 | 1.23E-58 | -1.69E-46 |
| MS.gene05458 | MS.gene58802 | 0.815702 | 8.08E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene58802 | 0.871149 | 8.51E-67 | -1.69E-46 |
| MS.gene05468 | MS.gene58802 | 0.813339 | 2.69E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene58802 | 0.846788 | 1.74E-59 | -1.69E-46 |
| MS.gene054991 | MS.gene58802 | 0.837254 | 5.79E-57 | -1.69E-46 |
| MS.gene055166 | MS.gene58802 | 0.825167 | 5.43E-54 | -1.69E-46 |
| MS.gene055227 | MS.gene58802 | 0.829359 | 5.38E-55 | -1.69E-46 |
| MS.gene055228 | MS.gene58802 | 0.822506 | 2.28E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene58802 | 0.807703 | 4.44E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene58802 | 0.809029 | 2.32E-50 | -1.69E-46 |
| MS.gene055586 | MS.gene58802 | 0.837974 | 3.79E-57 | -1.69E-46 |
| MS.gene055589 | MS.gene58802 | 0.841986 | 3.41E-58 | -1.69E-46 |
| MS.gene055701 | MS.gene58802 | 0.806174 | 9.35E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene58802 | 0.832628 | 8.48E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene58802 | 0.860061 | 2.69E-63 | -1.69E-46 |
| MS.gene055926 | MS.gene58802 | 0.845092 | 5.04E-59 | -1.69E-46 |
| MS.gene05604 | MS.gene58802 | 0.856754 | 2.60E-62 | -1.69E-46 |
| MS.gene056050 | MS.gene58802 | 0.851716 | 7.41E-61 | -1.69E-46 |
| MS.gene056162 | MS.gene58802 | 0.826266 | 2.98E-54 | -1.69E-46 |
| MS.gene056173 | MS.gene58802 | 0.815712 | 8.03E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene58802 | 0.841711 | 4.03E-58 | -1.69E-46 |
| MS.gene056366 | MS.gene58802 | 0.832395 | 9.69E-56 | -1.69E-46 |
| MS.gene056424 | MS.gene58802 | 0.804259 | 2.35E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene58802 | 0.824046 | 9.98E-54 | -1.69E-46 |
| MS.gene056595 | MS.gene58802 | 0.816732 | 4.75E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene58802 | 0.810535 | 1.10E-50 | -1.69E-46 |
| MS.gene056779 | MS.gene58802 | 0.810116 | 1.35E-50 | -1.69E-46 |
| MS.gene056854 | MS.gene58802 | 0.802697 | 4.96E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene58802 | 0.840637 | 7.71E-58 | -1.69E-46 |
| MS.gene05690 | MS.gene58802 | 0.809265 | 2.06E-50 | -1.69E-46 |
| MS.gene057012 | MS.gene58802 | 0.832942 | 7.09E-56 | -1.69E-46 |
| MS.gene057026 | MS.gene58802 | 0.853925 | 1.73E-61 | -1.69E-46 |
| MS.gene057027 | MS.gene58802 | 0.812984 | 3.22E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene58802 | 0.809857 | 1.54E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene58802 | 0.847401 | 1.18E-59 | -1.69E-46 |
| MS.gene057314 | MS.gene58802 | 0.80413 | 2.50E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene58802 | 0.819277 | 1.26E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene58802 | 0.805941 | 1.05E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene58802 | 0.812083 | 5.07E-51 | -1.69E-46 |
| MS.gene057855 | MS.gene58802 | 0.800094 | 1.69E-48 | -1.69E-46 |
| MS.gene057869 | MS.gene58802 | 0.825916 | 3.61E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene58802 | 0.852788 | 3.67E-61 | -1.69E-46 |
| MS.gene057921 | MS.gene58802 | 0.802851 | 4.61E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene58802 | 0.828126 | 1.07E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene58802 | 0.839078 | 1.96E-57 | -1.69E-46 |
| MS.gene058289 | MS.gene58802 | 0.813156 | 2.95E-51 | -1.69E-46 |
| MS.gene058477 | MS.gene58802 | 0.827256 | 1.73E-54 | -1.69E-46 |
| MS.gene058515 | MS.gene58802 | 0.815875 | 7.39E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene58802 | 0.849152 | 3.88E-60 | -1.69E-46 |
| MS.gene058636 | MS.gene58802 | 0.800029 | 1.75E-48 | -1.69E-46 |
| MS.gene058829 | MS.gene58802 | 0.827349 | 1.64E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene58802 | 0.854975 | 8.60E-62 | -1.69E-46 |
| MS.gene05897 | MS.gene58802 | 0.805635 | 1.21E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene58802 | 0.801958 | 7.04E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene58802 | 0.818169 | 2.26E-52 | -1.69E-46 |
| MS.gene059276 | MS.gene58802 | 0.801668 | 8.08E-49 | -1.69E-46 |
| MS.gene059283 | MS.gene58802 | 0.822883 | 1.87E-53 | -1.69E-46 |
| MS.gene059439 | MS.gene58802 | 0.840019 | 1.12E-57 | -1.69E-46 |
| MS.gene059440 | MS.gene58802 | 0.801544 | 8.57E-49 | -1.69E-46 |
| MS.gene059550 | MS.gene58802 | 0.823614 | 1.26E-53 | -1.69E-46 |
| MS.gene059570 | MS.gene58802 | 0.839076 | 1.97E-57 | -1.69E-46 |
| MS.gene059584 | MS.gene58802 | 0.809459 | 1.87E-50 | -1.69E-46 |
| MS.gene059601 | MS.gene58802 | 0.814543 | 1.46E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene58802 | 0.825894 | 3.65E-54 | -1.69E-46 |
| MS.gene059725 | MS.gene58802 | 0.800103 | 1.69E-48 | -1.69E-46 |
| MS.gene059842 | MS.gene58802 | 0.814017 | 1.91E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene58802 | 0.811381 | 7.20E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene58802 | 0.837692 | 4.48E-57 | -1.69E-46 |
| MS.gene060167 | MS.gene58802 | 0.816513 | 5.32E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene58802 | 0.824176 | 9.30E-54 | -1.69E-46 |
| MS.gene060373 | MS.gene58802 | 0.852761 | 3.73E-61 | -1.69E-46 |
| MS.gene060435 | MS.gene58802 | 0.804492 | 2.11E-49 | -1.69E-46 |
| MS.gene060521 | MS.gene58802 | 0.824783 | 6.69E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene58802 | 0.854636 | 1.08E-61 | -1.69E-46 |
| MS.gene060637 | MS.gene58802 | 0.81072 | 1.00E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene58802 | 0.816392 | 5.66E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene58802 | 0.80802 | 3.80E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene58802 | 0.804601 | 2.00E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene58802 | 0.800513 | 1.39E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58802.t1 | MTR_5g037260 | 95.495 | 333 | 11 | 1 | 1 | 333 | 1 | 329 | 0.0 | 626 |
| MS.gene58802.t1 | MTR_5g037260 | 90.991 | 333 | 10 | 1 | 1 | 333 | 1 | 313 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58802.t1 | AT1G10417 | 51.757 | 313 | 131 | 1 | 1 | 313 | 1 | 293 | 1.87e-93 | 281 |
| MS.gene58802.t1 | AT1G10417 | 44.507 | 355 | 135 | 2 | 1 | 313 | 1 | 335 | 8.53e-81 | 252 |
| MS.gene58802.t1 | AT1G10417 | 44.507 | 355 | 135 | 2 | 1 | 313 | 1 | 335 | 1.27e-80 | 252 |
| MS.gene58802.t1 | AT1G10417 | 49.485 | 291 | 127 | 1 | 23 | 313 | 27 | 297 | 2.62e-80 | 247 |
Find 44 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCATCTTACAGAGGTTTC+AGG | 0.250922 | 5.3:-60339668 | MS.gene58802:CDS |
| CTTTATCTTTGACAATGTTC+TGG | 0.282120 | 5.3:+60340380 | None:intergenic |
| TAACCGAAGTTCGAGATCTA+AGG | 0.283589 | 5.3:-60342324 | MS.gene58802:CDS |
| TAAAGAAGAGAGACAGAAAT+TGG | 0.305113 | 5.3:-60341704 | MS.gene58802:CDS |
| GAGACAGAAATTGGAGAGAA+AGG | 0.341865 | 5.3:-60341695 | MS.gene58802:intron |
| ATATGAAGATAGAAGATATT+AGG | 0.354714 | 5.3:-60338743 | None:intergenic |
| ACAAGAACTGCAGGGTGAAT+TGG | 0.359919 | 5.3:-60341734 | MS.gene58802:CDS |
| TCACCTTCAGAAAACTATAT+TGG | 0.373394 | 5.3:-60339845 | MS.gene58802:CDS |
| CACAGACCTAAGAAACAAAC+TGG | 0.396922 | 5.3:-60340071 | MS.gene58802:CDS |
| GAATAAGCAGAAAGAGTTGA+AGG | 0.429608 | 5.3:-60341553 | MS.gene58802:CDS |
| AACTTGAAGCAAAGCTGGAC+GGG | 0.432828 | 5.3:-60340003 | MS.gene58802:CDS |
| CTCAGAACTTGAAGCAAAGC+TGG | 0.437179 | 5.3:-60340008 | MS.gene58802:CDS |
| GGAAAACCTGGATTAGAAGA+TGG | 0.461210 | 5.3:+60342199 | None:intergenic |
| CTCATCTTACAGAGGTTTCA+GGG | 0.465498 | 5.3:-60339667 | MS.gene58802:CDS |
| GTTCACTTGAAAACAAAGAT+AGG | 0.468522 | 5.3:-60340501 | MS.gene58802:CDS |
| ATAACTATTCCGTGGTGGTA+TGG | 0.473075 | 5.3:+60339937 | None:intergenic |
| ATATATCTTCTATTTGAGCT+TGG | 0.478304 | 5.3:+60339960 | None:intergenic |
| AAGGCTTTACGTAATGAAGT+TGG | 0.484234 | 5.3:-60339700 | MS.gene58802:CDS |
| TAGAAAGATACAAGAACTGC+AGG | 0.489287 | 5.3:-60341743 | MS.gene58802:CDS |
| TGAATAGCTTACTTCAGTCC+AGG | 0.493890 | 5.3:-60341524 | MS.gene58802:CDS |
| TACCCTTAGATCTCGAACTT+CGG | 0.494712 | 5.3:+60342321 | None:intergenic |
| ATTATTTGATTCTATAGAGA+AGG | 0.505158 | 5.3:-60340437 | MS.gene58802:CDS |
| ACAACACCATCTTCTAATCC+AGG | 0.525293 | 5.3:-60342205 | MS.gene58802:intron |
| GTCAAAGATAAAGAAGAAGT+TGG | 0.527883 | 5.3:-60340370 | MS.gene58802:intron |
| TTTGAGAATAGAAGCAGAAG+CGG | 0.540138 | 5.3:-60341783 | MS.gene58802:intron |
| ATTTGATTCTATAGAGAAGG+AGG | 0.540704 | 5.3:-60340434 | MS.gene58802:CDS |
| TAATTTAATTTCAGACAAAG+AGG | 0.544715 | 5.3:-60339803 | MS.gene58802:intron |
| GAACTTGAAGCAAAGCTGGA+CGG | 0.548691 | 5.3:-60340004 | MS.gene58802:CDS |
| GAATAGCTTACTTCAGTCCA+GGG | 0.560439 | 5.3:-60341523 | MS.gene58802:CDS |
| AACCGAAGTTCGAGATCTAA+GGG | 0.565135 | 5.3:-60342323 | MS.gene58802:intron |
| TCAGAAAACTATATTGGCAA+AGG | 0.574990 | 5.3:-60339839 | MS.gene58802:CDS |
| AATAAGCAGAAAGAGTTGAA+GGG | 0.576372 | 5.3:-60341552 | MS.gene58802:CDS |
| ACTTGAAGCAAAGCTGGACG+GGG | 0.599974 | 5.3:-60340002 | MS.gene58802:CDS |
| TAGAAGATGGTGTTGTTGAG+TGG | 0.608466 | 5.3:+60342212 | None:intergenic |
| ATAGAAGCAGAAGCGGAATG+AGG | 0.609486 | 5.3:-60341776 | MS.gene58802:intron |
| GAGAATTTATCTTCTCTGAG+AGG | 0.618426 | 5.3:+60340467 | None:intergenic |
| TGTTACTAATATGAATGAAG+AGG | 0.620183 | 5.3:-60339641 | MS.gene58802:intron |
| TGATATAGATAACTATTCCG+TGG | 0.623717 | 5.3:+60339929 | None:intergenic |
| GCTTAAGACTCATCTTACAG+AGG | 0.643186 | 5.3:-60339675 | MS.gene58802:CDS |
| AAACAAACTGGAAAACAAAG+AGG | 0.646544 | 5.3:-60340059 | MS.gene58802:CDS |
| AGAAAGATACAAGAACTGCA+GGG | 0.660504 | 5.3:-60341742 | MS.gene58802:CDS |
| AAGATGGTGTTGTTGAGTGG+CGG | 0.673616 | 5.3:+60342215 | None:intergenic |
| TATAGATAACTATTCCGTGG+TGG | 0.710944 | 5.3:+60339932 | None:intergenic |
| AAGATATATCCATACCACCA+CGG | 0.727509 | 5.3:-60339946 | MS.gene58802:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTTTTTTTTT+TGG | - | chr5.3:60340509-60340528 | MS.gene58802:CDS | 0.0% |
| !!! | GTGTTTTTTTTTTTTTTTTT+TGG | - | chr5.3:60339472-60339491 | MS.gene58802:intron | 10.0% |
| !!! | TTTTTGATTTTTGAAAAAAT+GGG | - | chr5.3:60340563-60340582 | MS.gene58802:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTGGAAAA+GGG | - | chr5.3:60339479-60339498 | MS.gene58802:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTGGAAA+AGG | - | chr5.3:60339478-60339497 | MS.gene58802:intron | 10.0% |
| !! | AATTCATATAATATTTCCAA+CGG | + | chr5.3:60342047-60342066 | None:intergenic | 15.0% |
| !! | AGAAAGAAAGAAAAAAAATT+GGG | + | chr5.3:60341915-60341934 | None:intergenic | 15.0% |
| !! | ATATCAATAATAAATGCAAA+AGG | - | chr5.3:60342147-60342166 | MS.gene58802:intron | 15.0% |
| !! | CAATTAGAAAACAATAAAAA+CGG | + | chr5.3:60339660-60339679 | None:intergenic | 15.0% |
| !! | TAATGTACAATAGAAATATA+TGG | - | chr5.3:60341759-60341778 | MS.gene58802:CDS | 15.0% |
| !!! | AAAACTTAATTGAAGAATTT+TGG | + | chr5.3:60338942-60338961 | None:intergenic | 15.0% |
| !!! | AATTTTTTTCATCTTTTTCT+AGG | - | chr5.3:60341506-60341525 | MS.gene58802:CDS | 15.0% |
| !!! | ATGGATTTTTATATACTTTA+TGG | + | chr5.3:60339014-60339033 | None:intergenic | 15.0% |
| !!! | GTTTTTGATTTTTGAAAAAA+TGG | - | chr5.3:60340562-60340581 | MS.gene58802:intron | 15.0% |
| !! | AAAATCAAAAACACATTCAA+AGG | + | chr5.3:60340554-60340573 | None:intergenic | 20.0% |
| !! | AAAATGTAGAATAGAACAAA+GGG | + | chr5.3:60340955-60340974 | None:intergenic | 20.0% |
| !! | AAAATTCTAATCCAAAATCT+TGG | + | chr5.3:60340433-60340452 | None:intergenic | 20.0% |
| !! | AAATTCTAATCCAAAATCTT+GGG | + | chr5.3:60340432-60340451 | None:intergenic | 20.0% |
| !! | AGTTATATATACACAAATAC+TGG | - | chr5.3:60339830-60339849 | MS.gene58802:CDS | 20.0% |
| !! | ATCATGTTAATTGAAAATCA+CGG | - | chr5.3:60339784-60339803 | MS.gene58802:intron | 20.0% |
| !! | ATTATTTGATTCTATAGAGA+AGG | - | chr5.3:60340680-60340699 | MS.gene58802:intron | 20.0% |
| !! | GAGAAAGAAAGAAAAAAAAT+TGG | + | chr5.3:60341916-60341935 | None:intergenic | 20.0% |
| !! | TAAAATGTAGAATAGAACAA+AGG | + | chr5.3:60340956-60340975 | None:intergenic | 20.0% |
| !! | TAATTTCATATGAAAAGAAC+CGG | + | chr5.3:60341660-60341679 | None:intergenic | 20.0% |
| !! | TTCTATTAGAACCTAATAAA+GGG | + | chr5.3:60339728-60339747 | None:intergenic | 20.0% |
| !! | TTTCTATTAGAACCTAATAA+AGG | + | chr5.3:60339729-60339748 | None:intergenic | 20.0% |
| !!! | AAGATTTTGGATTAGAATTT+TGG | - | chr5.3:60340432-60340451 | MS.gene58802:CDS | 20.0% |
| !!! | ATTGTTAACTTTTGTTTGTT+AGG | - | chr5.3:60341555-60341574 | MS.gene58802:CDS | 20.0% |
| !!! | ATTTTATCTGCTTTGTAAAT+TGG | - | chr5.3:60341983-60342002 | MS.gene58802:intron | 20.0% |
| !!! | TAATTTAATTTCAGACAAAG+AGG | - | chr5.3:60341314-60341333 | MS.gene58802:intron | 20.0% |
| !!! | TAGTGAATTAGTTATTTTTC+TGG | - | chr5.3:60341835-60341854 | MS.gene58802:intron | 20.0% |
| !!! | TCAAGATTTTTAATTACCTT+TGG | - | chr5.3:60340217-60340236 | MS.gene58802:CDS | 20.0% |
| !!! | TTTTATCTGCTTTGTAAATT+GGG | - | chr5.3:60341984-60342003 | MS.gene58802:intron | 20.0% |
| !!! | TTTTTCTGGTAAATGTAAAT+AGG | - | chr5.3:60341849-60341868 | MS.gene58802:intron | 20.0% |
| !!! | TTTTTTGGAAATTCTGATTA+TGG | - | chr5.3:60340524-60340543 | MS.gene58802:CDS | 20.0% |
| ! | AAAGGAAAGACAAAAATAAC+TGG | + | chr5.3:60340856-60340875 | None:intergenic | 25.0% |
| ! | AATATGCAATGAAATTTCTG+TGG | + | chr5.3:60340833-60340852 | None:intergenic | 25.0% |
| ! | AATTCTAATCCAAAATCTTG+GGG | + | chr5.3:60340431-60340450 | None:intergenic | 25.0% |
| ! | ATATATCTTCTATTTGAGCT+TGG | + | chr5.3:60341160-60341179 | None:intergenic | 25.0% |
| ! | ATTTAGATCACTAAGATCAA+AGG | + | chr5.3:60341800-60341819 | None:intergenic | 25.0% |
| ! | GAATATCACTAAAACAAAGA+AGG | - | chr5.3:60340465-60340484 | MS.gene58802:CDS | 25.0% |
| ! | GAATTTCTAACACTTCATTA+TGG | + | chr5.3:60339905-60339924 | None:intergenic | 25.0% |
| ! | GCATTTGAAAAAGAATTTGT+TGG | - | chr5.3:60340917-60340936 | MS.gene58802:intron | 25.0% |
| ! | GTTTATTTCAAAGATATACG+AGG | - | chr5.3:60341615-60341634 | MS.gene58802:intron | 25.0% |
| ! | TCATTATGGTTCATACAATA+GGG | + | chr5.3:60339891-60339910 | None:intergenic | 25.0% |
| ! | TGTTACTAATATGAATGAAG+AGG | - | chr5.3:60341476-60341495 | MS.gene58802:intron | 25.0% |
| ! | TTCATTATGGTTCATACAAT+AGG | + | chr5.3:60339892-60339911 | None:intergenic | 25.0% |
| ! | TTTATCTGCTTTGTAAATTG+GGG | - | chr5.3:60341985-60342004 | MS.gene58802:intron | 25.0% |
| ! | TTTGCCTAATCTTAGAATTT+GGG | + | chr5.3:60340131-60340150 | None:intergenic | 25.0% |
| !! | ATCTTCATATCTCTTTTTCT+TGG | + | chr5.3:60342364-60342383 | None:intergenic | 25.0% |
| !! | GTTTTATATCAAGCATATTC+TGG | - | chr5.3:60340707-60340726 | MS.gene58802:intron | 25.0% |
| !! | TATTAGGTTCTAATAGAAAG+TGG | - | chr5.3:60339730-60339749 | MS.gene58802:intron | 25.0% |
| !!! | AATAGAAAGTGGTTTTACAT+TGG | - | chr5.3:60339741-60339760 | MS.gene58802:intron | 25.0% |
| !!! | ATTAAAAATCTTGAGTTGAG+AGG | + | chr5.3:60340211-60340230 | None:intergenic | 25.0% |
| !!! | GACGGATTTTATATAGTTTA+AGG | - | chr5.3:60339210-60339229 | MS.gene58802:intron | 25.0% |
| !!! | TGATATGTTCTAGAACAAAA+AGG | + | chr5.3:60341028-60341047 | None:intergenic | 25.0% |
| !!! | TGATTTTGGTTTTGTAATGT+AGG | - | chr5.3:60339507-60339526 | MS.gene58802:intron | 25.0% |
| !!! | TTAAAAATCTTGAGTTGAGA+GGG | + | chr5.3:60340210-60340229 | None:intergenic | 25.0% |
| !!! | TTGGTAAGTAGTTTTTTTAC+TGG | - | chr5.3:60340766-60340785 | MS.gene58802:intron | 25.0% |
| AAACAAACTGGAAAACAAAG+AGG | - | chr5.3:60341058-60341077 | MS.gene58802:intron | 30.0% | |
| AAAGATATACGAGGACAATA+AGG | - | chr5.3:60341624-60341643 | MS.gene58802:intron | 30.0% | |
| AATAAGCAGAAAGAGTTGAA+GGG | - | chr5.3:60339565-60339584 | MS.gene58802:intron | 30.0% | |
| AATAGCAGAGACAAAATTGA+CGG | - | chr5.3:60339192-60339211 | MS.gene58802:intron | 30.0% | |
| ACTAATATGAATGAAGAGGT+AGG | - | chr5.3:60341480-60341499 | MS.gene58802:intron | 30.0% | |
| ACTCGTTGGTACTAAATTAA+TGG | + | chr5.3:60339033-60339052 | None:intergenic | 30.0% | |
| AGAAGGCTCATACTTTATAT+TGG | - | chr5.3:60340482-60340501 | MS.gene58802:CDS | 30.0% | |
| AGCATAACTGAAATAGATGA+GGG | - | chr5.3:60340280-60340299 | MS.gene58802:intron | 30.0% | |
| ATTGGCGTTAAAGAAGAAAA+TGG | + | chr5.3:60338827-60338846 | None:intergenic | 30.0% | |
| ATTTGATTCTATAGAGAAGG+AGG | - | chr5.3:60340683-60340702 | MS.gene58802:intron | 30.0% | |
| CAAAAATCGCATACAAAGAA+AGG | + | chr5.3:60339318-60339337 | None:intergenic | 30.0% | |
| CTTAGAGACTAAATTGAAGA+TGG | - | chr5.3:60339258-60339277 | MS.gene58802:intron | 30.0% | |
| CTTTATCTTTGACAATGTTC+TGG | + | chr5.3:60340740-60340759 | None:intergenic | 30.0% | |
| CTTTGCCTAATCTTAGAATT+TGG | + | chr5.3:60340132-60340151 | None:intergenic | 30.0% | |
| GAAGAAAAGGAAATGGAAAT+TGG | + | chr5.3:60338845-60338864 | None:intergenic | 30.0% | |
| GTCAAAGATAAAGAAGAAGT+TGG | - | chr5.3:60340747-60340766 | MS.gene58802:intron | 30.0% | |
| GTCTCTGCTATTAAAATGTT+GGG | + | chr5.3:60339184-60339203 | None:intergenic | 30.0% | |
| GTTCACTTGAAAACAAAGAT+AGG | - | chr5.3:60340616-60340635 | MS.gene58802:intron | 30.0% | |
| TAAAGAAGAGAGACAGAAAT+TGG | - | chr5.3:60339413-60339432 | MS.gene58802:intron | 30.0% | |
| TAGTTTAGGGACTAAATTGA+TGG | - | chr5.3:60339286-60339305 | MS.gene58802:intron | 30.0% | |
| TCACCTTCAGAAAACTATAT+TGG | - | chr5.3:60341272-60341291 | MS.gene58802:intron | 30.0% | |
| TCAGAAAACTATATTGGCAA+AGG | - | chr5.3:60341278-60341297 | MS.gene58802:intron | 30.0% | |
| TGATATAGATAACTATTCCG+TGG | + | chr5.3:60341191-60341210 | None:intergenic | 30.0% | |
| TGTCTCTGCTATTAAAATGT+TGG | + | chr5.3:60339185-60339204 | None:intergenic | 30.0% | |
| TTAAACGAGTAAAGTATGAG+AGG | - | chr5.3:60340166-60340185 | MS.gene58802:intron | 30.0% | |
| TTCAATCTTGAGAACTAACA+AGG | + | chr5.3:60342210-60342229 | None:intergenic | 30.0% | |
| TTTCAGTTATGCTCAAATTC+AGG | + | chr5.3:60340273-60340292 | None:intergenic | 30.0% | |
| ! | AAATTTTGTGATTGCTTACG+AGG | - | chr5.3:60339618-60339637 | MS.gene58802:intron | 30.0% |
| ! | ATGAGAATAACTTTTTGTCC+TGG | + | chr5.3:60342288-60342307 | None:intergenic | 30.0% |
| ! | CCTTTGGATTATTTTCGAAA+AGG | + | chr5.3:60341401-60341420 | None:intergenic | 30.0% |
| ! | CCTTTTCGAAAATAATCCAA+AGG | - | chr5.3:60341398-60341417 | MS.gene58802:intron | 30.0% |
| ! | TCATCTTTTTCTAGGTAGAA+GGG | - | chr5.3:60341514-60341533 | MS.gene58802:CDS | 30.0% |
| ! | TTACCTTTGGTAGTTCAATT+TGG | - | chr5.3:60340230-60340249 | MS.gene58802:CDS | 30.0% |
| ! | TTCATCTTTTTCTAGGTAGA+AGG | - | chr5.3:60341513-60341532 | MS.gene58802:CDS | 30.0% |
| ! | TTGCCAATATAGTTTTCTGA+AGG | + | chr5.3:60341278-60341297 | None:intergenic | 30.0% |
| !! | TAAAAATCTTGAGTTGAGAG+GGG | + | chr5.3:60340209-60340228 | None:intergenic | 30.0% |
| !! | TGTTTTCCAGTTTGTTTCTT+AGG | + | chr5.3:60341055-60341074 | None:intergenic | 30.0% |
| !! | TTGAAGAATTTTGGAAAACC+TGG | + | chr5.3:60338933-60338952 | None:intergenic | 30.0% |
| !! | TTTGAAAAAATGGGTTACAC+AGG | - | chr5.3:60340572-60340591 | MS.gene58802:intron | 30.0% |
| !! | TTTTACATAGATGGTGTTAG+AGG | - | chr5.3:60339863-60339882 | MS.gene58802:intron | 30.0% |
| !!! | GGAAAAGGGATTATTGATTT+TGG | - | chr5.3:60339493-60339512 | MS.gene58802:intron | 30.0% |
| !!! | GTCTGTTGTTTTTACATAGA+TGG | - | chr5.3:60339854-60339873 | MS.gene58802:intron | 30.0% |
| !!! | TCTATCCTTTTTTCTTGACT+CGG | + | chr5.3:60341084-60341103 | None:intergenic | 30.0% |
| !!! | TTCTCAATTTTTTCCAGTGT+CGG | - | chr5.3:60339126-60339145 | MS.gene58802:intron | 30.0% |
| AAATTGGAGAGAAAGGTTTG+GGG | - | chr5.3:60339429-60339448 | MS.gene58802:intron | 35.0% | |
| AAGATATATCCATACCACCA+CGG | - | chr5.3:60341171-60341190 | MS.gene58802:intron | 35.0% | |
| AAGGCTTTACGTAATGAAGT+TGG | - | chr5.3:60341417-60341436 | MS.gene58802:intron | 35.0% | |
| AATATGAATGAAGAGGTAGG+TGG | - | chr5.3:60341483-60341502 | MS.gene58802:intron | 35.0% | |
| AATTGGGAAAAATGTGATCC+AGG | + | chr5.3:60341899-60341918 | None:intergenic | 35.0% | |
| ACTTCATTACGTAAAGCCTT+TGG | + | chr5.3:60341417-60341436 | None:intergenic | 35.0% | |
| AGAAAGATACAAGAACTGCA+GGG | - | chr5.3:60339375-60339394 | MS.gene58802:intron | 35.0% | |
| AGAAATTGGAGAGAAAGGTT+TGG | - | chr5.3:60339427-60339446 | MS.gene58802:intron | 35.0% | |
| AGAGCAAAAGTTGAGTTAGT+AGG | - | chr5.3:60340399-60340418 | MS.gene58802:CDS | 35.0% | |
| AGAGGAAGAAGAAAAGGAAA+TGG | + | chr5.3:60338852-60338871 | None:intergenic | 35.0% | |
| ATTGGGAAAAATGTGATCCA+GGG | + | chr5.3:60341898-60341917 | None:intergenic | 35.0% | |
| CATATCCTGATTTCATTGCA+TGG | + | chr5.3:60340330-60340349 | None:intergenic | 35.0% | |
| CCTGAAAAAGTTGAAGTTAG+AGG | + | chr5.3:60338870-60338889 | None:intergenic | 35.0% | |
| CTAATCTTAGAATTTGGGCT+GGG | + | chr5.3:60340126-60340145 | None:intergenic | 35.0% | |
| CTACTAGTGTTCCCTTTATT+AGG | - | chr5.3:60339714-60339733 | MS.gene58802:intron | 35.0% | |
| CTGGTAAATGTAAATAGGAC+CGG | - | chr5.3:60341854-60341873 | MS.gene58802:intron | 35.0% | |
| CTTGAAAAACAAAATGGACC+AGG | - | chr5.3:60340889-60340908 | MS.gene58802:intron | 35.0% | |
| GAAATTGGAGAGAAAGGTTT+GGG | - | chr5.3:60339428-60339447 | MS.gene58802:intron | 35.0% | |
| GAAGATGGAGTGATAGTTTA+GGG | - | chr5.3:60339273-60339292 | MS.gene58802:intron | 35.0% | |
| GAAGTTAGAGGAAGAAGAAA+AGG | + | chr5.3:60338858-60338877 | None:intergenic | 35.0% | |
| GAATAAGCAGAAAGAGTTGA+AGG | - | chr5.3:60339564-60339583 | MS.gene58802:intron | 35.0% | |
| GACCAGCTTGAAAAACAAAA+TGG | - | chr5.3:60340883-60340902 | MS.gene58802:intron | 35.0% | |
| GAGAAATGAGAACAGAAGAA+AGG | + | chr5.3:60341699-60341718 | None:intergenic | 35.0% | |
| GAGAATTTATCTTCTCTGAG+AGG | + | chr5.3:60340653-60340672 | None:intergenic | 35.0% | |
| GAGCATAACTGAAATAGATG+AGG | - | chr5.3:60340279-60340298 | MS.gene58802:intron | 35.0% | |
| GATAACCATGCAATGAAATC+AGG | - | chr5.3:60340322-60340341 | MS.gene58802:intron | 35.0% | |
| GCTAGAAAAGTAGTTATCTC+CGG | + | chr5.3:60341876-60341895 | None:intergenic | 35.0% | |
| GTAGTGCGTGTATAAAGTTT+GGG | - | chr5.3:60340058-60340077 | MS.gene58802:CDS | 35.0% | |
| TAGAAAGATACAAGAACTGC+AGG | - | chr5.3:60339374-60339393 | MS.gene58802:intron | 35.0% | |
| TATAGATAACTATTCCGTGG+TGG | + | chr5.3:60341188-60341207 | None:intergenic | 35.0% | |
| TCTTGAGAACTAACAAGGAA+TGG | + | chr5.3:60342205-60342224 | None:intergenic | 35.0% | |
| TGAAGATGGAGTGATAGTTT+AGG | - | chr5.3:60339272-60339291 | MS.gene58802:intron | 35.0% | |
| TGTAGTGCGTGTATAAAGTT+TGG | - | chr5.3:60340057-60340076 | MS.gene58802:CDS | 35.0% | |
| TTCATATGAAAAGAACCGGA+GGG | + | chr5.3:60341656-60341675 | None:intergenic | 35.0% | |
| TTTCATATGAAAAGAACCGG+AGG | + | chr5.3:60341657-60341676 | None:intergenic | 35.0% | |
| TTTGAGAATAGAAGCAGAAG+CGG | - | chr5.3:60339334-60339353 | MS.gene58802:intron | 35.0% | |
| ! | AGCAATCACAAAATTTTCCC+TGG | + | chr5.3:60339614-60339633 | None:intergenic | 35.0% |
| ! | TCGCTGTTTCGATGAATTAA+CGG | - | chr5.3:60338978-60338997 | MS.gene58802:intron | 35.0% |
| !! | CCTCTAACTTCAACTTTTTC+AGG | - | chr5.3:60338867-60338886 | MS.gene58802:intron | 35.0% |
| !! | GAACAGAAGAAAGGCATTAA+AGG | + | chr5.3:60341690-60341709 | None:intergenic | 35.0% |
| !!! | GTCCATTTTGTTTTTCAAGC+TGG | + | chr5.3:60340888-60340907 | None:intergenic | 35.0% |
| !!! | TGCAAAGCTTGTTTTATTCC+AGG | - | chr5.3:60342267-60342286 | MS.gene58802:intron | 35.0% |
| AAAACCACCTTGTAAGGTGA+GGG | + | chr5.3:60340087-60340106 | None:intergenic | 40.0% | |
| AACCGAAGTTCGAGATCTAA+GGG | - | chr5.3:60338794-60338813 | MS.gene58802:CDS | 40.0% | |
| ACAACACCATCTTCTAATCC+AGG | - | chr5.3:60338912-60338931 | MS.gene58802:intron | 40.0% | |
| ACAATAAGGAATACTCCCTC+CGG | - | chr5.3:60341638-60341657 | MS.gene58802:intron | 40.0% | |
| ACTCATCTTACAGAGGTTTC+AGG | - | chr5.3:60341449-60341468 | MS.gene58802:intron | 40.0% | |
| ACTTTATACACGCACTACAC+AGG | + | chr5.3:60340056-60340075 | None:intergenic | 40.0% | |
| ATAACTATTCCGTGGTGGTA+TGG | + | chr5.3:60341183-60341202 | None:intergenic | 40.0% | |
| ATTGACACCCAACACAATGA+AGG | + | chr5.3:60339998-60340017 | None:intergenic | 40.0% | |
| CACAGACCTAAGAAACAAAC+TGG | - | chr5.3:60341046-60341065 | MS.gene58802:intron | 40.0% | |
| CAGCCAAATTGAACTACCAA+AGG | + | chr5.3:60340236-60340255 | None:intergenic | 40.0% | |
| CCTAATCTTAGAATTTGGGC+TGG | + | chr5.3:60340127-60340146 | None:intergenic | 40.0% | |
| CCTTACAAAACCACCTTGTA+AGG | + | chr5.3:60340093-60340112 | None:intergenic | 40.0% | |
| CTCATCTTACAGAGGTTTCA+GGG | - | chr5.3:60341450-60341469 | MS.gene58802:intron | 40.0% | |
| GAATAGCTTACTTCAGTCCA+GGG | - | chr5.3:60339594-60339613 | MS.gene58802:intron | 40.0% | |
| GAGACAGAAATTGGAGAGAA+AGG | - | chr5.3:60339422-60339441 | MS.gene58802:intron | 40.0% | |
| GCTTAAGACTCATCTTACAG+AGG | - | chr5.3:60341442-60341461 | MS.gene58802:intron | 40.0% | |
| TAACCGAAGTTCGAGATCTA+AGG | - | chr5.3:60338793-60338812 | MS.gene58802:CDS | 40.0% | |
| TACCCTTAGATCTCGAACTT+CGG | + | chr5.3:60338799-60338818 | None:intergenic | 40.0% | |
| TAGAAATTCCGCCTTCATTG+CGG | - | chr5.3:60339916-60339935 | MS.gene58802:CDS | 40.0% | |
| TCAAGCTGGTCACTGAATAA+AGG | + | chr5.3:60340874-60340893 | None:intergenic | 40.0% | |
| TCATTGTGTTGGGTGTCAAT+GGG | - | chr5.3:60339998-60340017 | MS.gene58802:CDS | 40.0% | |
| TGAATAGCTTACTTCAGTCC+AGG | - | chr5.3:60339593-60339612 | MS.gene58802:intron | 40.0% | |
| TTCATTGTGTTGGGTGTCAA+TGG | - | chr5.3:60339997-60340016 | MS.gene58802:CDS | 40.0% | |
| ! | GGAAAACCTGGATTAGAAGA+TGG | + | chr5.3:60338921-60338940 | None:intergenic | 40.0% |
| ! | GTTCGAAGCATGCATACTTT+TGG | - | chr5.3:60340794-60340813 | MS.gene58802:intron | 40.0% |
| !! | CCAGCCCAAATTCTAAGATT+AGG | - | chr5.3:60340124-60340143 | MS.gene58802:intron | 40.0% |
| !! | GATAACTACTTTTCTAGCCC+TGG | - | chr5.3:60341878-60341897 | MS.gene58802:intron | 40.0% |
| !! | TAGAAGATGGTGTTGTTGAG+TGG | + | chr5.3:60338908-60338927 | None:intergenic | 40.0% |
| !!! | AGTAGTTTTTTTACTGGCGC+AGG | - | chr5.3:60340772-60340791 | MS.gene58802:intron | 40.0% |
| !!! | CCTTACAAGGTGGTTTTGTA+AGG | - | chr5.3:60340090-60340109 | MS.gene58802:intron | 40.0% |
| !!! | CTTTTTCAAATGCTGAGACC+TGG | + | chr5.3:60340910-60340929 | None:intergenic | 40.0% |
| AACTTGAAGCAAAGCTGGAC+GGG | - | chr5.3:60341114-60341133 | MS.gene58802:intron | 45.0% | |
| ACAAGAACTGCAGGGTGAAT+TGG | - | chr5.3:60339383-60339402 | MS.gene58802:intron | 45.0% | |
| AGAGGCCGAGTCAAGAAAAA+AGG | - | chr5.3:60341076-60341095 | MS.gene58802:intron | 45.0% | |
| ATAGAAGCAGAAGCGGAATG+AGG | - | chr5.3:60339341-60339360 | MS.gene58802:intron | 45.0% | |
| CAAAACCACCTTGTAAGGTG+AGG | + | chr5.3:60340088-60340107 | None:intergenic | 45.0% | |
| CACCCAACACAATGAAGGTA+CGG | + | chr5.3:60339993-60340012 | None:intergenic | 45.0% | |
| CTCAGAACTTGAAGCAAAGC+TGG | - | chr5.3:60341109-60341128 | MS.gene58802:intron | 45.0% | |
| CTCCGTACCTTCATTGTGTT+GGG | - | chr5.3:60339988-60340007 | MS.gene58802:CDS | 45.0% | |
| GAACTTGAAGCAAAGCTGGA+CGG | - | chr5.3:60341113-60341132 | MS.gene58802:intron | 45.0% | |
| GTAAAGTATGAGAGGAAGCG+TGG | - | chr5.3:60340174-60340193 | MS.gene58802:intron | 45.0% | |
| ! | ACGTCTTTGATCAGAGGTGT+TGG | + | chr5.3:60339062-60339081 | None:intergenic | 45.0% |
| ! | AGGTTTACGCCCCAAGATTT+TGG | - | chr5.3:60340419-60340438 | MS.gene58802:CDS | 45.0% |
| !! | AAGATGGTGTTGTTGAGTGG+CGG | + | chr5.3:60338905-60338924 | None:intergenic | 45.0% |
| !! | GAATATTAAATAAAATAAAA+AGG | + | chr5.3:60340353-60340372 | None:intergenic | 5.0% |
| ACAGGCCATATCTCTACGCA+AGG | + | chr5.3:60340038-60340057 | None:intergenic | 50.0% | |
| ACTTGAAGCAAAGCTGGACG+GGG | - | chr5.3:60341115-60341134 | MS.gene58802:intron | 50.0% | |
| CCAGACACGTCTTTGATCAG+AGG | + | chr5.3:60339068-60339087 | None:intergenic | 50.0% | |
| CCTCCGTACCTTCATTGTGT+TGG | - | chr5.3:60339987-60340006 | MS.gene58802:CDS | 50.0% | |
| CCTCTGATCAAAGACGTGTC+TGG | - | chr5.3:60339065-60339084 | MS.gene58802:intron | 50.0% | |
| CTGATCAAAGACGTGTCTGG+TGG | - | chr5.3:60339068-60339087 | MS.gene58802:intron | 50.0% | |
| GCACTGCAATACAACTCCGT+TGG | - | chr5.3:60342028-60342047 | MS.gene58802:intron | 50.0% | |
| GCCATATCTCTACGCAAGGT+GGG | + | chr5.3:60340034-60340053 | None:intergenic | 50.0% | |
| TCCCACCTTGCGTAGAGATA+TGG | - | chr5.3:60340030-60340049 | MS.gene58802:CDS | 50.0% | |
| TTGTGTTGGGTGTCAATGGG+TGG | - | chr5.3:60340001-60340020 | MS.gene58802:CDS | 50.0% | |
| ! | CCAACACAATGAAGGTACGG+AGG | + | chr5.3:60339990-60340009 | None:intergenic | 50.0% |
| !! | CATTTGGGTTGCCTTCACTG+CGG | - | chr5.3:60339964-60339983 | MS.gene58802:CDS | 50.0% |
| !! | GAGCTAAGAAGCACTGACAC+CGG | + | chr5.3:60339162-60339181 | None:intergenic | 50.0% |
| AATGCCGCAATCAGGTGGCT+AGG | + | chr5.3:60339948-60339967 | None:intergenic | 55.0% | |
| ACCCAAATGCCGCAATCAGG+TGG | + | chr5.3:60339953-60339972 | None:intergenic | 55.0% | |
| AGCCACCTGATTGCGGCATT+TGG | - | chr5.3:60339948-60339967 | MS.gene58802:CDS | 55.0% | |
| ATGCCGCAATCAGGTGGCTA+GGG | + | chr5.3:60339947-60339966 | None:intergenic | 55.0% | |
| GCAACCCAAATGCCGCAATC+AGG | + | chr5.3:60339956-60339975 | None:intergenic | 55.0% | |
| GCCACCTGATTGCGGCATTT+GGG | - | chr5.3:60339949-60339968 | MS.gene58802:CDS | 55.0% | |
| GGCCATATCTCTACGCAAGG+TGG | + | chr5.3:60340035-60340054 | None:intergenic | 55.0% | |
| !! | CAGTGTCGGTGTTCTGTGTC+CGG | - | chr5.3:60339140-60339159 | MS.gene58802:intron | 55.0% |
| !! | GGTGTTGGTGCTACACTCGT+TGG | + | chr5.3:60339047-60339066 | None:intergenic | 55.0% |
| CACCCCTAGCCACCTGATTG+CGG | - | chr5.3:60339941-60339960 | MS.gene58802:CDS | 60.0% | |
| CGGACACAGAACACCGACAC+TGG | + | chr5.3:60339142-60339161 | None:intergenic | 60.0% | |
| CTAGGGGTGGACCGCAATGA+AGG | + | chr5.3:60339930-60339949 | None:intergenic | 60.0% | |
| GCAGCCCTCACCTTACAAGG+TGG | - | chr5.3:60340080-60340099 | MS.gene58802:CDS | 60.0% | |
| TGCCGCAATCAGGTGGCTAG+GGG | + | chr5.3:60339946-60339965 | None:intergenic | 60.0% | |
| TGGGCAGCCCTCACCTTACA+AGG | - | chr5.3:60340077-60340096 | MS.gene58802:CDS | 60.0% | |
| AGGTACGGAGGCCGCAGTGA+AGG | + | chr5.3:60339978-60339997 | None:intergenic | 65.0% | |
| CGCAATCAGGTGGCTAGGGG+TGG | + | chr5.3:60339943-60339962 | None:intergenic | 65.0% | |
| GGGGTGGACCGCAATGAAGG+CGG | + | chr5.3:60339927-60339946 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 60338744 | 60342395 | 60338744 | ID=MS.gene58802 |
| chr5.3 | mRNA | 60338744 | 60342395 | 60338744 | ID=MS.gene58802.t1;Parent=MS.gene58802 |
| chr5.3 | exon | 60342324 | 60342395 | 60342324 | ID=MS.gene58802.t1.exon1;Parent=MS.gene58802.t1 |
| chr5.3 | CDS | 60342324 | 60342395 | 60342324 | ID=cds.MS.gene58802.t1;Parent=MS.gene58802.t1 |
| chr5.3 | exon | 60342206 | 60342250 | 60342206 | ID=MS.gene58802.t1.exon2;Parent=MS.gene58802.t1 |
| chr5.3 | CDS | 60342206 | 60342250 | 60342206 | ID=cds.MS.gene58802.t1;Parent=MS.gene58802.t1 |
| chr5.3 | exon | 60341696 | 60341794 | 60341696 | ID=MS.gene58802.t1.exon3;Parent=MS.gene58802.t1 |
| chr5.3 | CDS | 60341696 | 60341794 | 60341696 | ID=cds.MS.gene58802.t1;Parent=MS.gene58802.t1 |
| chr5.3 | exon | 60341500 | 60341610 | 60341500 | ID=MS.gene58802.t1.exon4;Parent=MS.gene58802.t1 |
| chr5.3 | CDS | 60341500 | 60341610 | 60341500 | ID=cds.MS.gene58802.t1;Parent=MS.gene58802.t1 |
| chr5.3 | exon | 60340371 | 60340545 | 60340371 | ID=MS.gene58802.t1.exon5;Parent=MS.gene58802.t1 |
| chr5.3 | CDS | 60340371 | 60340545 | 60340371 | ID=cds.MS.gene58802.t1;Parent=MS.gene58802.t1 |
| chr5.3 | exon | 60340201 | 60340257 | 60340201 | ID=MS.gene58802.t1.exon6;Parent=MS.gene58802.t1 |
| chr5.3 | CDS | 60340201 | 60340257 | 60340201 | ID=cds.MS.gene58802.t1;Parent=MS.gene58802.t1 |
| chr5.3 | exon | 60339910 | 60340100 | 60339910 | ID=MS.gene58802.t1.exon7;Parent=MS.gene58802.t1 |
| chr5.3 | CDS | 60339910 | 60340100 | 60339910 | ID=cds.MS.gene58802.t1;Parent=MS.gene58802.t1 |
| chr5.3 | exon | 60339804 | 60339869 | 60339804 | ID=MS.gene58802.t1.exon8;Parent=MS.gene58802.t1 |
| chr5.3 | CDS | 60339804 | 60339869 | 60339804 | ID=cds.MS.gene58802.t1;Parent=MS.gene58802.t1 |
| chr5.3 | exon | 60339642 | 60339719 | 60339642 | ID=MS.gene58802.t1.exon9;Parent=MS.gene58802.t1 |
| chr5.3 | CDS | 60339642 | 60339719 | 60339642 | ID=cds.MS.gene58802.t1;Parent=MS.gene58802.t1 |
| chr5.3 | exon | 60338744 | 60338850 | 60338744 | ID=MS.gene58802.t1.exon10;Parent=MS.gene58802.t1 |
| chr5.3 | CDS | 60338744 | 60338850 | 60338744 | ID=cds.MS.gene58802.t1;Parent=MS.gene58802.t1 |
| Gene Sequence |
| Protein sequence |
