Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39277.t1 | XP_013444062.1 | 97.9 | 238 | 5 | 0 | 13 | 250 | 87 | 324 | 6.10E-128 | 466.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39277.t1 | O80934 | 30.7 | 254 | 135 | 9 | 10 | 244 | 87 | 318 | 5.2e-19 | 96.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39277.t1 | G7ZVT6 | 97.9 | 238 | 5 | 0 | 13 | 250 | 87 | 324 | 4.4e-128 | 466.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene39277 | 0.806308 | 8.76E-50 | -1.69E-46 |
| MS.gene049170 | MS.gene39277 | 0.807362 | 5.25E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene39277 | 0.898471 | 5.14E-77 | -1.69E-46 |
| MS.gene049369 | MS.gene39277 | 0.84298 | 1.86E-58 | -1.69E-46 |
| MS.gene049396 | MS.gene39277 | 0.824762 | 6.77E-54 | -1.69E-46 |
| MS.gene049488 | MS.gene39277 | 0.832501 | 9.12E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene39277 | 0.828722 | 7.67E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene39277 | 0.807355 | 5.26E-50 | -1.69E-46 |
| MS.gene049662 | MS.gene39277 | 0.805715 | 1.17E-49 | -1.69E-46 |
| MS.gene049757 | MS.gene39277 | 0.801239 | 9.89E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene39277 | 0.802248 | 6.14E-49 | -1.69E-46 |
| MS.gene050122 | MS.gene39277 | 0.847954 | 8.34E-60 | -1.69E-46 |
| MS.gene050301 | MS.gene39277 | 0.823094 | 1.67E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene39277 | 0.806534 | 7.85E-50 | -1.69E-46 |
| MS.gene050400 | MS.gene39277 | 0.819341 | 1.22E-52 | -1.69E-46 |
| MS.gene050426 | MS.gene39277 | -0.853579 | 2.18E-61 | -1.69E-46 |
| MS.gene050464 | MS.gene39277 | 0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene050529 | MS.gene39277 | 0.815195 | 1.05E-51 | -1.69E-46 |
| MS.gene050553 | MS.gene39277 | 0.802555 | 5.31E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene39277 | 0.839853 | 1.24E-57 | -1.69E-46 |
| MS.gene050625 | MS.gene39277 | 0.824471 | 7.93E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene39277 | 0.930695 | 1.13E-93 | -1.69E-46 |
| MS.gene050747 | MS.gene39277 | 0.824753 | 6.81E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene39277 | 0.8217 | 3.51E-53 | -1.69E-46 |
| MS.gene050971 | MS.gene39277 | 0.841023 | 6.11E-58 | -1.69E-46 |
| MS.gene05105 | MS.gene39277 | 0.906243 | 1.83E-80 | -1.69E-46 |
| MS.gene051360 | MS.gene39277 | 0.863361 | 2.63E-64 | -1.69E-46 |
| MS.gene051387 | MS.gene39277 | 0.844416 | 7.66E-59 | -1.69E-46 |
| MS.gene051521 | MS.gene39277 | 0.825942 | 3.56E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene39277 | 0.88765 | 1.18E-72 | -1.69E-46 |
| MS.gene051582 | MS.gene39277 | 0.815538 | 8.78E-52 | -1.69E-46 |
| MS.gene051588 | MS.gene39277 | 0.841119 | 5.76E-58 | -1.69E-46 |
| MS.gene051605 | MS.gene39277 | 0.83622 | 1.06E-56 | -1.69E-46 |
| MS.gene051612 | MS.gene39277 | 0.807647 | 4.56E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene39277 | 0.824704 | 6.99E-54 | -1.69E-46 |
| MS.gene051734 | MS.gene39277 | 0.805545 | 1.27E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene39277 | 0.831867 | 1.31E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene39277 | 0.816744 | 4.72E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene39277 | -0.87828 | 3.19E-69 | -1.69E-46 |
| MS.gene052077 | MS.gene39277 | 0.824633 | 7.26E-54 | -1.69E-46 |
| MS.gene052128 | MS.gene39277 | -0.802433 | 5.62E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene39277 | 0.856379 | 3.35E-62 | -1.69E-46 |
| MS.gene052135 | MS.gene39277 | 0.867062 | 1.80E-65 | -1.69E-46 |
| MS.gene052136 | MS.gene39277 | 0.863233 | 2.88E-64 | -1.69E-46 |
| MS.gene052188 | MS.gene39277 | 0.895645 | 7.87E-76 | -1.69E-46 |
| MS.gene052253 | MS.gene39277 | 0.903786 | 2.42E-79 | -1.69E-46 |
| MS.gene052310 | MS.gene39277 | 0.835359 | 1.76E-56 | -1.69E-46 |
| MS.gene052322 | MS.gene39277 | 0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene052340 | MS.gene39277 | 0.856917 | 2.33E-62 | -1.69E-46 |
| MS.gene052346 | MS.gene39277 | 0.875767 | 2.38E-68 | -1.69E-46 |
| MS.gene052414 | MS.gene39277 | 0.91795 | 2.84E-86 | -1.69E-46 |
| MS.gene052421 | MS.gene39277 | 0.842523 | 2.45E-58 | -1.69E-46 |
| MS.gene052469 | MS.gene39277 | 0.801043 | 1.08E-48 | -1.69E-46 |
| MS.gene052481 | MS.gene39277 | 0.850294 | 1.86E-60 | -1.69E-46 |
| MS.gene052484 | MS.gene39277 | 0.817933 | 2.55E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene39277 | 0.866093 | 3.67E-65 | -1.69E-46 |
| MS.gene052501 | MS.gene39277 | 0.846034 | 2.80E-59 | -1.69E-46 |
| MS.gene052505 | MS.gene39277 | 0.855733 | 5.17E-62 | -1.69E-46 |
| MS.gene052982 | MS.gene39277 | 0.878176 | 3.47E-69 | -1.69E-46 |
| MS.gene052999 | MS.gene39277 | 0.816098 | 6.59E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene39277 | 0.870908 | 1.02E-66 | -1.69E-46 |
| MS.gene05316 | MS.gene39277 | 0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene39277 | 0.828125 | 1.07E-54 | -1.69E-46 |
| MS.gene053318 | MS.gene39277 | 0.804458 | 2.14E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene39277 | 0.827319 | 1.67E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene39277 | 0.823112 | 1.65E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene39277 | 0.82708 | 1.91E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene39277 | 0.851891 | 6.60E-61 | -1.69E-46 |
| MS.gene053873 | MS.gene39277 | 0.831359 | 1.75E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene39277 | 0.858554 | 7.61E-63 | -1.69E-46 |
| MS.gene054010 | MS.gene39277 | 0.801733 | 7.83E-49 | -1.69E-46 |
| MS.gene054011 | MS.gene39277 | 0.800489 | 1.41E-48 | -1.69E-46 |
| MS.gene054102 | MS.gene39277 | 0.813176 | 2.92E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene39277 | 0.809135 | 2.20E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene39277 | 0.87569 | 2.53E-68 | -1.69E-46 |
| MS.gene054349 | MS.gene39277 | 0.868725 | 5.28E-66 | -1.69E-46 |
| MS.gene054556 | MS.gene39277 | 0.881708 | 1.92E-70 | -1.69E-46 |
| MS.gene054719 | MS.gene39277 | 0.835075 | 2.07E-56 | -1.69E-46 |
| MS.gene054917 | MS.gene39277 | 0.805584 | 1.24E-49 | -1.69E-46 |
| MS.gene054920 | MS.gene39277 | 0.841078 | 5.91E-58 | -1.69E-46 |
| MS.gene054927 | MS.gene39277 | 0.831682 | 1.45E-55 | -1.69E-46 |
| MS.gene05494 | MS.gene39277 | 0.804852 | 1.77E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene39277 | 0.825575 | 4.35E-54 | -1.69E-46 |
| MS.gene055116 | MS.gene39277 | 0.908492 | 1.61E-81 | -1.69E-46 |
| MS.gene055369 | MS.gene39277 | 0.881888 | 1.65E-70 | -1.69E-46 |
| MS.gene055486 | MS.gene39277 | 0.804555 | 2.04E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene39277 | 0.880095 | 7.28E-70 | -1.69E-46 |
| MS.gene05553 | MS.gene39277 | 0.861473 | 1.00E-63 | -1.69E-46 |
| MS.gene055564 | MS.gene39277 | 0.811678 | 6.21E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene39277 | 0.826331 | 2.88E-54 | -1.69E-46 |
| MS.gene055666 | MS.gene39277 | 0.813813 | 2.12E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene39277 | 0.896915 | 2.33E-76 | -1.69E-46 |
| MS.gene055744 | MS.gene39277 | 0.90642 | 1.51E-80 | -1.69E-46 |
| MS.gene055892 | MS.gene39277 | 0.811907 | 5.53E-51 | -1.69E-46 |
| MS.gene055893 | MS.gene39277 | 0.81955 | 1.10E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene39277 | 0.863881 | 1.81E-64 | -1.69E-46 |
| MS.gene055911 | MS.gene39277 | 0.870034 | 1.98E-66 | -1.69E-46 |
| MS.gene05594 | MS.gene39277 | 0.822666 | 2.10E-53 | -1.69E-46 |
| MS.gene05602 | MS.gene39277 | 0.811203 | 7.87E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene39277 | 0.847341 | 1.23E-59 | -1.69E-46 |
| MS.gene056191 | MS.gene39277 | 0.82698 | 2.01E-54 | -1.69E-46 |
| MS.gene056233 | MS.gene39277 | 0.809071 | 2.27E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene39277 | 0.835816 | 1.35E-56 | -1.69E-46 |
| MS.gene056422 | MS.gene39277 | 0.826943 | 2.06E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene39277 | 0.890021 | 1.43E-73 | -1.69E-46 |
| MS.gene056514 | MS.gene39277 | 0.860144 | 2.53E-63 | -1.69E-46 |
| MS.gene05664 | MS.gene39277 | 0.837535 | 4.91E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene39277 | 0.881364 | 2.55E-70 | -1.69E-46 |
| MS.gene05666 | MS.gene39277 | 0.842971 | 1.87E-58 | -1.69E-46 |
| MS.gene056723 | MS.gene39277 | 0.855996 | 4.34E-62 | -1.69E-46 |
| MS.gene056782 | MS.gene39277 | 0.806718 | 7.18E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene39277 | 0.82924 | 5.75E-55 | -1.69E-46 |
| MS.gene056899 | MS.gene39277 | -0.807159 | 5.79E-50 | -1.69E-46 |
| MS.gene056902 | MS.gene39277 | 0.814309 | 1.65E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene39277 | 0.829513 | 4.94E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene39277 | 0.809271 | 2.06E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene39277 | 0.823639 | 1.24E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene39277 | 0.892019 | 2.33E-74 | -1.69E-46 |
| MS.gene057289 | MS.gene39277 | 0.823673 | 1.22E-53 | -1.69E-46 |
| MS.gene057330 | MS.gene39277 | 0.805969 | 1.03E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene39277 | 0.851315 | 9.61E-61 | -1.69E-46 |
| MS.gene057448 | MS.gene39277 | 0.826921 | 2.08E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene39277 | 0.802253 | 6.12E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene39277 | 0.813136 | 2.98E-51 | -1.69E-46 |
| MS.gene057476 | MS.gene39277 | 0.857826 | 1.25E-62 | -1.69E-46 |
| MS.gene057537 | MS.gene39277 | 0.802514 | 5.41E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene39277 | 0.864214 | 1.43E-64 | -1.69E-46 |
| MS.gene057749 | MS.gene39277 | 0.887751 | 1.08E-72 | -1.69E-46 |
| MS.gene057823 | MS.gene39277 | 0.882293 | 1.18E-70 | -1.69E-46 |
| MS.gene057825 | MS.gene39277 | 0.856058 | 4.16E-62 | -1.69E-46 |
| MS.gene057826 | MS.gene39277 | 0.801406 | 9.14E-49 | -1.69E-46 |
| MS.gene057888 | MS.gene39277 | 0.820264 | 7.52E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene39277 | 0.822244 | 2.63E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene39277 | 0.892702 | 1.24E-74 | -1.69E-46 |
| MS.gene058082 | MS.gene39277 | 0.80393 | 2.76E-49 | -1.69E-46 |
| MS.gene058090 | MS.gene39277 | 0.840838 | 6.83E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene39277 | 0.808235 | 3.42E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene39277 | 0.879974 | 8.04E-70 | -1.69E-46 |
| MS.gene058130 | MS.gene39277 | 0.816104 | 6.57E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene39277 | 0.823998 | 1.02E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene39277 | 0.828862 | 7.10E-55 | -1.69E-46 |
| MS.gene058376 | MS.gene39277 | 0.866248 | 3.28E-65 | -1.69E-46 |
| MS.gene058444 | MS.gene39277 | 0.877234 | 7.40E-69 | -1.69E-46 |
| MS.gene058660 | MS.gene39277 | 0.818712 | 1.70E-52 | -1.69E-46 |
| MS.gene058700 | MS.gene39277 | 0.905707 | 3.23E-80 | -1.69E-46 |
| MS.gene058710 | MS.gene39277 | 0.839374 | 1.65E-57 | -1.69E-46 |
| MS.gene05886 | MS.gene39277 | 0.8494 | 3.31E-60 | -1.69E-46 |
| MS.gene058928 | MS.gene39277 | 0.855217 | 7.32E-62 | -1.69E-46 |
| MS.gene058948 | MS.gene39277 | 0.907027 | 7.89E-81 | -1.69E-46 |
| MS.gene058949 | MS.gene39277 | 0.847912 | 8.56E-60 | -1.69E-46 |
| MS.gene058995 | MS.gene39277 | 0.8225 | 2.29E-53 | -1.69E-46 |
| MS.gene059011 | MS.gene39277 | 0.850507 | 1.62E-60 | -1.69E-46 |
| MS.gene05907 | MS.gene39277 | 0.839087 | 1.95E-57 | -1.69E-46 |
| MS.gene059080 | MS.gene39277 | 0.813682 | 2.26E-51 | -1.69E-46 |
| MS.gene059082 | MS.gene39277 | 0.839309 | 1.71E-57 | -1.69E-46 |
| MS.gene059141 | MS.gene39277 | 0.826988 | 2.00E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene39277 | 0.840646 | 7.67E-58 | -1.69E-46 |
| MS.gene059294 | MS.gene39277 | 0.826191 | 3.11E-54 | -1.69E-46 |
| MS.gene059366 | MS.gene39277 | 0.869186 | 3.74E-66 | -1.69E-46 |
| MS.gene059368 | MS.gene39277 | 0.825822 | 3.80E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene39277 | 0.905824 | 2.85E-80 | -1.69E-46 |
| MS.gene059455 | MS.gene39277 | 0.826022 | 3.41E-54 | -1.69E-46 |
| MS.gene059462 | MS.gene39277 | 0.851072 | 1.13E-60 | -1.69E-46 |
| MS.gene059499 | MS.gene39277 | 0.801781 | 7.66E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene39277 | 0.807623 | 4.62E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene39277 | 0.83748 | 5.07E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene39277 | 0.822905 | 1.84E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene39277 | 0.888855 | 4.08E-73 | -1.69E-46 |
| MS.gene059692 | MS.gene39277 | 0.864958 | 8.36E-65 | -1.69E-46 |
| MS.gene059695 | MS.gene39277 | 0.867738 | 1.10E-65 | -1.69E-46 |
| MS.gene059711 | MS.gene39277 | 0.815507 | 8.92E-52 | -1.69E-46 |
| MS.gene059807 | MS.gene39277 | 0.861344 | 1.10E-63 | -1.69E-46 |
| MS.gene05984 | MS.gene39277 | 0.826979 | 2.01E-54 | -1.69E-46 |
| MS.gene059876 | MS.gene39277 | 0.843792 | 1.13E-58 | -1.69E-46 |
| MS.gene059933 | MS.gene39277 | 0.838295 | 3.13E-57 | -1.69E-46 |
| MS.gene059946 | MS.gene39277 | 0.804527 | 2.07E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene39277 | 0.827999 | 1.15E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene39277 | 0.869145 | 3.85E-66 | -1.69E-46 |
| MS.gene060403 | MS.gene39277 | 0.869442 | 3.09E-66 | -1.69E-46 |
| MS.gene060485 | MS.gene39277 | 0.806766 | 7.01E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene39277 | 0.82165 | 3.61E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene39277 | 0.84417 | 8.92E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene39277 | 0.878622 | 2.42E-69 | -1.69E-46 |
| MS.gene060986 | MS.gene39277 | 0.806609 | 7.57E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene39277 | 0.810263 | 1.26E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene39277 | 0.83391 | 4.06E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene39277 | -0.825539 | 4.44E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene39277 | 0.892366 | 1.70E-74 | -1.69E-46 |
| MS.gene061159 | MS.gene39277 | 0.811674 | 6.22E-51 | -1.69E-46 |
| MS.gene061214 | MS.gene39277 | 0.804347 | 2.26E-49 | -1.69E-46 |
| MS.gene061215 | MS.gene39277 | 0.803354 | 3.63E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39277.t1 | MTR_8g010700 | 97.899 | 238 | 5 | 0 | 13 | 250 | 87 | 324 | 4.18e-175 | 484 |
| MS.gene39277.t1 | MTR_8g010600 | 98.333 | 120 | 2 | 0 | 131 | 250 | 15 | 134 | 3.36e-83 | 245 |
| MS.gene39277.t1 | MTR_4g021815 | 29.921 | 254 | 137 | 9 | 10 | 244 | 17 | 248 | 5.95e-25 | 99.8 |
| MS.gene39277.t1 | MTR_7g062140 | 30.435 | 253 | 137 | 9 | 10 | 244 | 91 | 322 | 4.74e-23 | 95.9 |
| MS.gene39277.t1 | MTR_4g068970 | 34.104 | 173 | 87 | 8 | 15 | 167 | 97 | 262 | 1.01e-15 | 76.6 |
| MS.gene39277.t1 | MTR_1g055185 | 82.051 | 39 | 7 | 0 | 1 | 39 | 13 | 51 | 8.63e-13 | 66.6 |
| MS.gene39277.t1 | MTR_8g010710 | 82.500 | 40 | 7 | 0 | 13 | 52 | 29 | 68 | 1.29e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39277.t1 | AT4G31530 | 78.112 | 233 | 51 | 0 | 17 | 249 | 91 | 323 | 3.22e-140 | 396 |
| MS.gene39277.t1 | AT4G31530 | 73.684 | 247 | 51 | 1 | 17 | 249 | 91 | 337 | 2.26e-136 | 387 |
| MS.gene39277.t1 | AT2G37660 | 31.641 | 256 | 130 | 10 | 10 | 244 | 87 | 318 | 1.67e-24 | 100 |
| MS.gene39277.t1 | AT5G02240 | 28.516 | 256 | 138 | 10 | 10 | 244 | 15 | 246 | 3.05e-22 | 92.4 |
| MS.gene39277.t1 | AT3G18890 | 32.174 | 230 | 117 | 11 | 16 | 225 | 98 | 308 | 3.10e-18 | 84.0 |
| MS.gene39277.t1 | AT2G34460 | 31.452 | 248 | 135 | 10 | 10 | 248 | 57 | 278 | 3.67e-18 | 82.0 |
Find 54 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTCTTACCAACTCTTTC+TGG | 0.132930 | 8.2:-80754763 | None:intergenic |
| CAGAGTTAACTTCGTATATT+TGG | 0.162981 | 8.2:-80755790 | None:intergenic |
| CGTAGCATTATGAACCTATT+TGG | 0.182500 | 8.2:+80755327 | MS.gene39277:intron |
| TCTTACCTAATTATAGTATA+TGG | 0.230550 | 8.2:-80755402 | None:intergenic |
| GCTTTCCATATACTATAATT+AGG | 0.245017 | 8.2:+80755397 | MS.gene39277:CDS |
| GAGGAATTTCTTCAGAATTC+TGG | 0.258581 | 8.2:+80755375 | MS.gene39277:CDS |
| GGTCCATCTGTCAACCTTCC+AGG | 0.296760 | 8.2:-80755511 | None:intergenic |
| CACTTCTGAGCATCATTTCC+AGG | 0.302200 | 8.2:-80756045 | None:intergenic |
| CAACGGCGAGCAGTGCTTAT+AGG | 0.332728 | 8.2:+80755580 | MS.gene39277:CDS |
| CACAAGGAAGCATGATGATT+TGG | 0.333240 | 8.2:+80754502 | MS.gene39277:CDS |
| GTTATTCTTGTATCATCAAT+AGG | 0.359072 | 8.2:+80754977 | MS.gene39277:CDS |
| TTAAGTTGCGCTTGATACTT+AGG | 0.362138 | 8.2:+80754118 | MS.gene39277:CDS |
| TGTACTTCAAGACACCAAAT+AGG | 0.374552 | 8.2:-80755341 | None:intergenic |
| GAGAAAGCCAAGACACTGTT+TGG | 0.384195 | 8.2:+80754147 | MS.gene39277:CDS |
| TCATCATCCCACCGCCTTGA+AGG | 0.413160 | 8.2:-80754733 | None:intergenic |
| ATGTTTCAGGGTGAAGGTCC+TGG | 0.459105 | 8.2:+80756027 | MS.gene39277:intron |
| TTTGGATCCATCCATGTTTG+AGG | 0.480502 | 8.2:+80754520 | MS.gene39277:CDS |
| TAAGTTGCGCTTGATACTTA+GGG | 0.482644 | 8.2:+80754119 | MS.gene39277:CDS |
| ACATTACTCAAAGCAACAGC+TGG | 0.493897 | 8.2:+80755556 | MS.gene39277:CDS |
| GTCTTGAAGTACAAGAAGAT+GGG | 0.495045 | 8.2:+80755351 | MS.gene39277:CDS |
| TTGTTCACCAAACAGTGTCT+TGG | 0.499030 | 8.2:-80754154 | None:intergenic |
| TTCAGCAACCACAATTCTAC+TGG | 0.500117 | 8.2:-80755729 | None:intergenic |
| CCATGGCAATTCATTACACT+TGG | 0.500166 | 8.2:-80755005 | None:intergenic |
| ATTAGGTATGCTTACCTCCA+TGG | 0.503084 | 8.2:-80755022 | None:intergenic |
| TGTCTTGAAGTACAAGAAGA+TGG | 0.527274 | 8.2:+80755350 | MS.gene39277:CDS |
| TTGAGATCATAAGACGTGTA+TGG | 0.539437 | 8.2:-80755532 | None:intergenic |
| TAGTATAGCTCACATGTCCT+TGG | 0.551109 | 8.2:-80753841 | None:intergenic |
| TATTTATTTGAAGATTGGGT+GGG | 0.551280 | 8.2:+80754911 | MS.gene39277:intron |
| ACTCATGTGATTTGCTGCAC+AGG | 0.557364 | 8.2:+80754697 | MS.gene39277:CDS |
| GGTTGCTGAAGCTTGCGTAC+AGG | 0.566427 | 8.2:+80755742 | MS.gene39277:CDS |
| AGACCTGGAAGGTTGACAGA+TGG | 0.569259 | 8.2:+80755508 | MS.gene39277:intron |
| ATGCATATGTTTCAGGGTGA+AGG | 0.572654 | 8.2:+80756021 | MS.gene39277:intron |
| TGAATATGATAGGTATTCAA+AGG | 0.574682 | 8.2:+80754476 | MS.gene39277:intron |
| GAAAATACACCAGAAAGAGT+TGG | 0.580873 | 8.2:+80754754 | MS.gene39277:CDS |
| TTATTTATTTGAAGATTGGG+TGG | 0.582766 | 8.2:+80754910 | MS.gene39277:intron |
| GAGTTTACCTCAAACATGGA+TGG | 0.585827 | 8.2:-80754527 | None:intergenic |
| TGAAGAGTTTACCTCAAACA+TGG | 0.589358 | 8.2:-80754531 | None:intergenic |
| CGAGCAGTGCTTATAGGTCA+AGG | 0.592563 | 8.2:+80755586 | MS.gene39277:CDS |
| CAGAGTCTAGTTACGATCCA+AGG | 0.602968 | 8.2:+80753824 | MS.gene39277:CDS |
| GAAGTGGCAAGAATTATTTG+TGG | 0.603707 | 8.2:+80756062 | MS.gene39277:CDS |
| ATACGAAGTTAACTCTGTTG+AGG | 0.606565 | 8.2:+80755796 | MS.gene39277:CDS |
| CTGGAAATGATGCTCAGAAG+TGG | 0.606575 | 8.2:+80756046 | MS.gene39277:CDS |
| TCAAAGCAACAGCTGGGCAA+CGG | 0.612805 | 8.2:+80755563 | MS.gene39277:CDS |
| ACAAGATGAAGAGAAACTGC+AGG | 0.619181 | 8.2:+80754173 | MS.gene39277:CDS |
| TCTTGAAGTACAAGAAGATG+GGG | 0.623108 | 8.2:+80755352 | MS.gene39277:CDS |
| CTTTCAGGAGATAAACTAGT+GGG | 0.632068 | 8.2:+80755701 | MS.gene39277:intron |
| CATTACTCAAAGCAACAGCT+GGG | 0.641871 | 8.2:+80755557 | MS.gene39277:CDS |
| CCAAGTGTAATGAATTGCCA+TGG | 0.645224 | 8.2:+80755005 | MS.gene39277:CDS |
| TTGTAGCATCACTGCTTCAG+CGG | 0.646030 | 8.2:+80754091 | MS.gene39277:CDS |
| AGTGTAATGAATTGCCATGG+AGG | 0.674948 | 8.2:+80755008 | MS.gene39277:CDS |
| GGGTGAAGCCAGTAGAATTG+TGG | 0.678142 | 8.2:+80755721 | MS.gene39277:CDS |
| AGGTATTCAAAGGAGACACA+AGG | 0.686371 | 8.2:+80754486 | MS.gene39277:intron |
| GCTTTCAGGAGATAAACTAG+TGG | 0.695591 | 8.2:+80755700 | MS.gene39277:intron |
| CTTGAAGTACAAGAAGATGG+GGG | 0.735141 | 8.2:+80755353 | MS.gene39277:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAATAATTAAGAATTTTA+CGG | - | chr8.2:80755916-80755935 | None:intergenic | 10.0% |
| !!! | ATTTTTATTTATTTGAAGAT+TGG | + | chr8.2:80754906-80754925 | MS.gene39277:intron | 10.0% |
| !!! | TTTTTATTTATTTGAAGATT+GGG | + | chr8.2:80754907-80754926 | MS.gene39277:intron | 10.0% |
| !!! | AAATGCATTTTAAATATATG+AGG | - | chr8.2:80755487-80755506 | None:intergenic | 15.0% |
| !! | TAAACTGAGAACTAATTATT+AGG | - | chr8.2:80755042-80755061 | None:intergenic | 20.0% |
| !! | TAGGTATATATAGTTATACA+TGG | + | chr8.2:80755845-80755864 | MS.gene39277:intron | 20.0% |
| !! | TCTTACCTAATTATAGTATA+TGG | - | chr8.2:80755405-80755424 | None:intergenic | 20.0% |
| !! | TGCATAAAATAACACTAAAA+AGG | - | chr8.2:80753962-80753981 | None:intergenic | 20.0% |
| !! | TTAAATATATGAGGAGATTT+CGG | - | chr8.2:80755478-80755497 | None:intergenic | 20.0% |
| !!! | ATGTAAACTATGTTGATAAA+TGG | + | chr8.2:80755269-80755288 | MS.gene39277:intron | 20.0% |
| !!! | GCATTTATTGATTTAAGATT+CGG | + | chr8.2:80755159-80755178 | MS.gene39277:intron | 20.0% |
| !!! | TCATCAGTATTGTTTTTATT+TGG | + | chr8.2:80754587-80754606 | MS.gene39277:intron | 20.0% |
| ! | AATAGTATTAACAACCTTGT+TGG | + | chr8.2:80753901-80753920 | MS.gene39277:intron | 25.0% |
| ! | AATTATGCGATGAACATTAT+TGG | - | chr8.2:80755616-80755635 | None:intergenic | 25.0% |
| ! | CAAGAGAATATATGGTAAAT+TGG | + | chr8.2:80754629-80754648 | MS.gene39277:intron | 25.0% |
| ! | CAATTTACCATATATTCTCT+TGG | - | chr8.2:80754631-80754650 | None:intergenic | 25.0% |
| ! | GCTTTCCATATACTATAATT+AGG | + | chr8.2:80755397-80755416 | MS.gene39277:CDS | 25.0% |
| ! | GTTATTCTTGTATCATCAAT+AGG | + | chr8.2:80754977-80754996 | MS.gene39277:CDS | 25.0% |
| ! | TAAATATATGAGGAGATTTC+GGG | - | chr8.2:80755477-80755496 | None:intergenic | 25.0% |
| ! | TATTTATTTGAAGATTGGGT+GGG | + | chr8.2:80754911-80754930 | MS.gene39277:intron | 25.0% |
| ! | TGAATATGATAGGTATTCAA+AGG | + | chr8.2:80754476-80754495 | MS.gene39277:intron | 25.0% |
| ! | TGCATATATATTGCAGATTT+CGG | + | chr8.2:80754791-80754810 | MS.gene39277:intron | 25.0% |
| ! | TTAGTTTAAGAATCAAATGC+AGG | + | chr8.2:80755961-80755980 | MS.gene39277:intron | 25.0% |
| ! | TTATTTATTTGAAGATTGGG+TGG | + | chr8.2:80754910-80754929 | MS.gene39277:intron | 25.0% |
| !! | AAGTGTTAGAAATTTTGTGA+CGG | + | chr8.2:80755678-80755697 | MS.gene39277:intron | 25.0% |
| !! | TTGACTTGACTTAATATTCA+GGG | + | chr8.2:80754061-80754080 | MS.gene39277:intron | 25.0% |
| !!! | AGCAAAAACACTTTTAGAAA+AGG | - | chr8.2:80755656-80755675 | None:intergenic | 25.0% |
| !!! | TACGGTTTTGATTCTATAAT+GGG | - | chr8.2:80755898-80755917 | None:intergenic | 25.0% |
| !!! | TTACGGTTTTGATTCTATAA+TGG | - | chr8.2:80755899-80755918 | None:intergenic | 25.0% |
| !!! | TTGATTCTATAATGGGATTT+TGG | - | chr8.2:80755891-80755910 | None:intergenic | 25.0% |
| !!! | TTTAAAATGCATTTTAGACC+TGG | + | chr8.2:80755493-80755512 | MS.gene39277:intron | 25.0% |
| AAAGAGCTCTTGAATATGAT+AGG | + | chr8.2:80754466-80754485 | MS.gene39277:intron | 30.0% | |
| AATACGACATATTACCAACA+AGG | - | chr8.2:80753918-80753937 | None:intergenic | 30.0% | |
| AATATGTCGTATTGTCATTG+TGG | + | chr8.2:80753925-80753944 | MS.gene39277:intron | 30.0% | |
| ACCGAATCTTAAATCAAGAA+AGG | - | chr8.2:80755222-80755241 | None:intergenic | 30.0% | |
| ATCAGCTAATTCTTCCATTA+AGG | - | chr8.2:80755125-80755144 | None:intergenic | 30.0% | |
| CAGAAAACAACTGTAAAATG+TGG | + | chr8.2:80753984-80754003 | MS.gene39277:intron | 30.0% | |
| CAGAGTTAACTTCGTATATT+TGG | - | chr8.2:80755793-80755812 | None:intergenic | 30.0% | |
| CCTAAAAACAAAATTACCAC+TGG | - | chr8.2:80755829-80755848 | None:intergenic | 30.0% | |
| GAAATATATAGTTTCGTGTG+TGG | + | chr8.2:80754829-80754848 | MS.gene39277:intron | 30.0% | |
| GTATCAGTTATGTATTTGTC+AGG | - | chr8.2:80754562-80754581 | None:intergenic | 30.0% | |
| TCTCTTTGATTATCCTTGTA+GGG | + | chr8.2:80754670-80754689 | MS.gene39277:intron | 30.0% | |
| TTACCATATATTCTCTTGGT+TGG | - | chr8.2:80754627-80754646 | None:intergenic | 30.0% | |
| TTCTCTTTGATTATCCTTGT+AGG | + | chr8.2:80754669-80754688 | MS.gene39277:intron | 30.0% | |
| ! | AAGAATAACTCTTTTCACTG+AGG | - | chr8.2:80754966-80754985 | None:intergenic | 30.0% |
| ! | GCCTTTCTTGATTTAAGATT+CGG | + | chr8.2:80755218-80755237 | MS.gene39277:intron | 30.0% |
| !! | GTTGACTTGACTTAATATTC+AGG | + | chr8.2:80754060-80754079 | MS.gene39277:intron | 30.0% |
| !!! | CCAGTGGTAATTTTGTTTTT+AGG | + | chr8.2:80755826-80755845 | MS.gene39277:intron | 30.0% |
| !!! | CTATGCCAATAGTTTTGATT+CGG | + | chr8.2:80754022-80754041 | MS.gene39277:intron | 30.0% |
| !!! | TAGCTGATACTTGTTTTTGT+TGG | + | chr8.2:80755137-80755156 | MS.gene39277:intron | 30.0% |
| !!! | TATGCCAATAGTTTTGATTC+GGG | + | chr8.2:80754023-80754042 | MS.gene39277:intron | 30.0% |
| AAAGAGTTTATAGCCGATCA+TGG | - | chr8.2:80755083-80755102 | None:intergenic | 35.0% | |
| ATACGAAGTTAACTCTGTTG+AGG | + | chr8.2:80755796-80755815 | MS.gene39277:CDS | 35.0% | |
| CATCCAACCAAGAGAATATA+TGG | + | chr8.2:80754621-80754640 | MS.gene39277:intron | 35.0% | |
| CGTAGCATTATGAACCTATT+TGG | + | chr8.2:80755327-80755346 | MS.gene39277:intron | 35.0% | |
| CGTATTGTCATTGTGGAATA+AGG | + | chr8.2:80753932-80753951 | MS.gene39277:intron | 35.0% | |
| CTTTCAGGAGATAAACTAGT+GGG | + | chr8.2:80755701-80755720 | MS.gene39277:intron | 35.0% | |
| GAAAATACACCAGAAAGAGT+TGG | + | chr8.2:80754754-80754773 | MS.gene39277:CDS | 35.0% | |
| GAAGTGGCAAGAATTATTTG+TGG | + | chr8.2:80756062-80756081 | MS.gene39277:CDS | 35.0% | |
| GAGGAATTTCTTCAGAATTC+TGG | + | chr8.2:80755375-80755394 | MS.gene39277:CDS | 35.0% | |
| GCTGAAATGCATATGTTTCA+GGG | + | chr8.2:80756015-80756034 | MS.gene39277:intron | 35.0% | |
| GCTTGAAAAGTTGACGATTA+AGG | - | chr8.2:80754861-80754880 | None:intergenic | 35.0% | |
| GGTACCACAAAAGCAATTAA+GGG | - | chr8.2:80754385-80754404 | None:intergenic | 35.0% | |
| GTCTTGAAGTACAAGAAGAT+GGG | + | chr8.2:80755351-80755370 | MS.gene39277:CDS | 35.0% | |
| TAAGTTGCGCTTGATACTTA+GGG | + | chr8.2:80754119-80754138 | MS.gene39277:CDS | 35.0% | |
| TCTTGAAGTACAAGAAGATG+GGG | + | chr8.2:80755352-80755371 | MS.gene39277:CDS | 35.0% | |
| TGAAGAGTTTACCTCAAACA+TGG | - | chr8.2:80754534-80754553 | None:intergenic | 35.0% | |
| TGATTCTTACCAACTCTTTC+TGG | - | chr8.2:80754766-80754785 | None:intergenic | 35.0% | |
| TGCTGAAATGCATATGTTTC+AGG | + | chr8.2:80756014-80756033 | MS.gene39277:intron | 35.0% | |
| TGGTACCACAAAAGCAATTA+AGG | - | chr8.2:80754386-80754405 | None:intergenic | 35.0% | |
| TGTACTTCAAGACACCAAAT+AGG | - | chr8.2:80755344-80755363 | None:intergenic | 35.0% | |
| TGTCTTGAAGTACAAGAAGA+TGG | + | chr8.2:80755350-80755369 | MS.gene39277:CDS | 35.0% | |
| TTAACAGACAGTGTAAGTCT+AGG | + | chr8.2:80754220-80754239 | MS.gene39277:intron | 35.0% | |
| TTGAGATCATAAGACGTGTA+TGG | - | chr8.2:80755535-80755554 | None:intergenic | 35.0% | |
| ! | AAATGCATTTTAGACCTGGA+AGG | + | chr8.2:80755497-80755516 | MS.gene39277:intron | 35.0% |
| ! | ATAACTCTTTTCACTGAGGA+AGG | - | chr8.2:80754962-80754981 | None:intergenic | 35.0% |
| ! | TTAAGTTGCGCTTGATACTT+AGG | + | chr8.2:80754118-80754137 | MS.gene39277:CDS | 35.0% |
| ! | TTCGGGAACATTCAACATTT+TGG | - | chr8.2:80755460-80755479 | None:intergenic | 35.0% |
| !!! | ATGCCAATAGTTTTGATTCG+GGG | + | chr8.2:80754024-80754043 | MS.gene39277:intron | 35.0% |
| ACAAGATGAAGAGAAACTGC+AGG | + | chr8.2:80754173-80754192 | MS.gene39277:CDS | 40.0% | |
| ACATTACTCAAAGCAACAGC+TGG | + | chr8.2:80755556-80755575 | MS.gene39277:CDS | 40.0% | |
| ACTCCCCGAATCAAAACTAT+TGG | - | chr8.2:80754030-80754049 | None:intergenic | 40.0% | |
| AGCATCTAGTGTGACCTTAA+TGG | + | chr8.2:80755108-80755127 | MS.gene39277:intron | 40.0% | |
| AGGTATTCAAAGGAGACACA+AGG | + | chr8.2:80754486-80754505 | MS.gene39277:intron | 40.0% | |
| AGTGTAATGAATTGCCATGG+AGG | + | chr8.2:80755008-80755027 | MS.gene39277:CDS | 40.0% | |
| ATGCATATGTTTCAGGGTGA+AGG | + | chr8.2:80756021-80756040 | MS.gene39277:intron | 40.0% | |
| ATTAAGGTCACACTAGATGC+TGG | - | chr8.2:80755109-80755128 | None:intergenic | 40.0% | |
| ATTAGGTATGCTTACCTCCA+TGG | - | chr8.2:80755025-80755044 | None:intergenic | 40.0% | |
| CATTACTCAAAGCAACAGCT+GGG | + | chr8.2:80755557-80755576 | MS.gene39277:CDS | 40.0% | |
| CCAAGGAAGAAAAAGCTTTG+TGG | + | chr8.2:80754406-80754425 | MS.gene39277:intron | 40.0% | |
| CCAAGTGTAATGAATTGCCA+TGG | + | chr8.2:80755005-80755024 | MS.gene39277:CDS | 40.0% | |
| CCATGGCAATTCATTACACT+TGG | - | chr8.2:80755008-80755027 | None:intergenic | 40.0% | |
| CTTGAAGTACAAGAAGATGG+GGG | + | chr8.2:80755353-80755372 | MS.gene39277:CDS | 40.0% | |
| GAGTTTACCTCAAACATGGA+TGG | - | chr8.2:80754530-80754549 | None:intergenic | 40.0% | |
| GCTTTCAGGAGATAAACTAG+TGG | + | chr8.2:80755700-80755719 | MS.gene39277:intron | 40.0% | |
| GTTTATAGCCGATCATGGAT+AGG | - | chr8.2:80755078-80755097 | None:intergenic | 40.0% | |
| TAGTATAGCTCACATGTCCT+TGG | - | chr8.2:80753844-80753863 | None:intergenic | 40.0% | |
| TAGTGTAGCCTATCCATGAT+CGG | + | chr8.2:80755067-80755086 | MS.gene39277:intron | 40.0% | |
| TTCAGCAACCACAATTCTAC+TGG | - | chr8.2:80755732-80755751 | None:intergenic | 40.0% | |
| TTGTTCACCAAACAGTGTCT+TGG | - | chr8.2:80754157-80754176 | None:intergenic | 40.0% | |
| TTTGGATCCATCCATGTTTG+AGG | + | chr8.2:80754520-80754539 | MS.gene39277:CDS | 40.0% | |
| ! | AGATTCGGTTTCACTACGTA+TGG | + | chr8.2:80755174-80755193 | MS.gene39277:intron | 40.0% |
| ! | CACAAGGAAGCATGATGATT+TGG | + | chr8.2:80754502-80754521 | MS.gene39277:CDS | 40.0% |
| ! | GAAATTTTGTGACGGCTTTC+AGG | + | chr8.2:80755686-80755705 | MS.gene39277:intron | 40.0% |
| ! | GAACAACAGCTTTTCCTTCA+AGG | + | chr8.2:80754719-80754738 | MS.gene39277:CDS | 40.0% |
| ! | GTGTAAGTCTAGGACTTGTT+CGG | + | chr8.2:80754230-80754249 | MS.gene39277:intron | 40.0% |
| ! | GTTACTACCATGCTACTTGT+TGG | + | chr8.2:80755196-80755215 | MS.gene39277:intron | 40.0% |
| ! | TCTAGGACTTGTTCGGTTTA+GGG | + | chr8.2:80754237-80754256 | MS.gene39277:intron | 40.0% |
| !! | AAGGCCCTTAATTGCTTTTG+TGG | + | chr8.2:80754378-80754397 | MS.gene39277:intron | 40.0% |
| !! | CAAAGCTTTTTCTTCCTTGG+TGG | - | chr8.2:80754406-80754425 | None:intergenic | 40.0% |
| !! | CCACAAAGCTTTTTCTTCCT+TGG | - | chr8.2:80754409-80754428 | None:intergenic | 40.0% |
| AGAAAGGCCAACAAGTAGCA+TGG | - | chr8.2:80755206-80755225 | None:intergenic | 45.0% | |
| CACTTCTGAGCATCATTTCC+AGG | - | chr8.2:80756048-80756067 | None:intergenic | 45.0% | |
| CAGAGTCTAGTTACGATCCA+AGG | + | chr8.2:80753824-80753843 | MS.gene39277:CDS | 45.0% | |
| CTGGAAATGATGCTCAGAAG+TGG | + | chr8.2:80756046-80756065 | MS.gene39277:CDS | 45.0% | |
| CTGTTGAGGTAAACTTCCAG+TGG | + | chr8.2:80755810-80755829 | MS.gene39277:intron | 45.0% | |
| GAGAAAGCCAAGACACTGTT+TGG | + | chr8.2:80754147-80754166 | MS.gene39277:CDS | 45.0% | |
| TTGTAGCATCACTGCTTCAG+CGG | + | chr8.2:80754091-80754110 | MS.gene39277:CDS | 45.0% | |
| ! | CAACAGCTTTTCCTTCAAGG+CGG | + | chr8.2:80754722-80754741 | MS.gene39277:CDS | 45.0% |
| ! | GTCTAGGACTTGTTCGGTTT+AGG | + | chr8.2:80754236-80754255 | MS.gene39277:intron | 45.0% |
| !! | ACTCATGTGATTTGCTGCAC+AGG | + | chr8.2:80754697-80754716 | MS.gene39277:CDS | 45.0% |
| !! | TTGCTTTTGTGGTACCACCA+AGG | + | chr8.2:80754389-80754408 | MS.gene39277:intron | 45.0% |
| !!! | TTTTTTTTTTTTTAACAAAA+AGG | + | chr8.2:80754359-80754378 | MS.gene39277:intron | 5.0% |
| AGACCTGGAAGGTTGACAGA+TGG | + | chr8.2:80755508-80755527 | MS.gene39277:intron | 50.0% | |
| ATGTTTCAGGGTGAAGGTCC+TGG | + | chr8.2:80756027-80756046 | MS.gene39277:intron | 50.0% | |
| CACATGAGTGACTCCCTACA+AGG | - | chr8.2:80754686-80754705 | None:intergenic | 50.0% | |
| CGAGCAGTGCTTATAGGTCA+AGG | + | chr8.2:80755586-80755605 | MS.gene39277:CDS | 50.0% | |
| GAAGTACAAGAAGATGGGGG+AGG | + | chr8.2:80755356-80755375 | MS.gene39277:CDS | 50.0% | |
| GGGTGAAGCCAGTAGAATTG+TGG | + | chr8.2:80755721-80755740 | MS.gene39277:CDS | 50.0% | |
| TCAAAGCAACAGCTGGGCAA+CGG | + | chr8.2:80755563-80755582 | MS.gene39277:CDS | 50.0% | |
| ! | AGCTTTTCCTTCAAGGCGGT+GGG | + | chr8.2:80754726-80754745 | MS.gene39277:CDS | 50.0% |
| CAACGGCGAGCAGTGCTTAT+AGG | + | chr8.2:80755580-80755599 | MS.gene39277:CDS | 55.0% | |
| GGTCCATCTGTCAACCTTCC+AGG | - | chr8.2:80755514-80755533 | None:intergenic | 55.0% | |
| GGTTGCTGAAGCTTGCGTAC+AGG | + | chr8.2:80755742-80755761 | MS.gene39277:CDS | 55.0% | |
| TCATCATCCCACCGCCTTGA+AGG | - | chr8.2:80754736-80754755 | None:intergenic | 55.0% | |
| ! | CAGCTTTTCCTTCAAGGCGG+TGG | + | chr8.2:80754725-80754744 | MS.gene39277:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 80753817 | 80756101 | 80753817 | ID=MS.gene39277 |
| chr8.2 | mRNA | 80753817 | 80756101 | 80753817 | ID=MS.gene39277.t1;Parent=MS.gene39277 |
| chr8.2 | exon | 80753817 | 80753850 | 80753817 | ID=MS.gene39277.t1.exon1;Parent=MS.gene39277.t1 |
| chr8.2 | CDS | 80753817 | 80753850 | 80753817 | ID=cds.MS.gene39277.t1;Parent=MS.gene39277.t1 |
| chr8.2 | exon | 80754082 | 80754194 | 80754082 | ID=MS.gene39277.t1.exon2;Parent=MS.gene39277.t1 |
| chr8.2 | CDS | 80754082 | 80754194 | 80754082 | ID=cds.MS.gene39277.t1;Parent=MS.gene39277.t1 |
| chr8.2 | exon | 80754488 | 80754541 | 80754488 | ID=MS.gene39277.t1.exon3;Parent=MS.gene39277.t1 |
| chr8.2 | CDS | 80754488 | 80754541 | 80754488 | ID=cds.MS.gene39277.t1;Parent=MS.gene39277.t1 |
| chr8.2 | exon | 80754691 | 80754775 | 80754691 | ID=MS.gene39277.t1.exon4;Parent=MS.gene39277.t1 |
| chr8.2 | CDS | 80754691 | 80754775 | 80754691 | ID=cds.MS.gene39277.t1;Parent=MS.gene39277.t1 |
| chr8.2 | exon | 80754924 | 80755029 | 80754924 | ID=MS.gene39277.t1.exon5;Parent=MS.gene39277.t1 |
| chr8.2 | CDS | 80754924 | 80755029 | 80754924 | ID=cds.MS.gene39277.t1;Parent=MS.gene39277.t1 |
| chr8.2 | exon | 80755332 | 80755418 | 80755332 | ID=MS.gene39277.t1.exon6;Parent=MS.gene39277.t1 |
| chr8.2 | CDS | 80755332 | 80755418 | 80755332 | ID=cds.MS.gene39277.t1;Parent=MS.gene39277.t1 |
| chr8.2 | exon | 80755510 | 80755607 | 80755510 | ID=MS.gene39277.t1.exon7;Parent=MS.gene39277.t1 |
| chr8.2 | CDS | 80755510 | 80755607 | 80755510 | ID=cds.MS.gene39277.t1;Parent=MS.gene39277.t1 |
| chr8.2 | exon | 80755708 | 80755817 | 80755708 | ID=MS.gene39277.t1.exon8;Parent=MS.gene39277.t1 |
| chr8.2 | CDS | 80755708 | 80755817 | 80755708 | ID=cds.MS.gene39277.t1;Parent=MS.gene39277.t1 |
| chr8.2 | exon | 80756036 | 80756101 | 80756036 | ID=MS.gene39277.t1.exon9;Parent=MS.gene39277.t1 |
| chr8.2 | CDS | 80756036 | 80756101 | 80756036 | ID=cds.MS.gene39277.t1;Parent=MS.gene39277.t1 |
| Gene Sequence |
| Protein sequence |
