Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066406.t1 | XP_013467507.1 | 97.4 | 507 | 13 | 0 | 1 | 507 | 1 | 507 | 1.30E-278 | 968.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066406.t1 | F4J3G5 | 75.7 | 437 | 101 | 3 | 75 | 507 | 84 | 519 | 1.6e-187 | 657.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066406.t1 | A0A072VHP1 | 97.4 | 507 | 13 | 0 | 1 | 507 | 1 | 507 | 9.4e-279 | 968.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049257 | MS.gene066406 | 0.800336 | 1.51E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene066406 | 0.800903 | 1.16E-48 | -1.69E-46 |
| MS.gene049757 | MS.gene066406 | 0.864149 | 1.50E-64 | -1.69E-46 |
| MS.gene050122 | MS.gene066406 | 0.808589 | 2.88E-50 | -1.69E-46 |
| MS.gene050133 | MS.gene066406 | -0.81482 | 1.27E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene066406 | 0.802115 | 6.54E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene066406 | 0.821433 | 4.05E-53 | -1.69E-46 |
| MS.gene050426 | MS.gene066406 | -0.809711 | 1.65E-50 | -1.69E-46 |
| MS.gene050502 | MS.gene066406 | 0.810827 | 9.50E-51 | -1.69E-46 |
| MS.gene050553 | MS.gene066406 | 0.861139 | 1.27E-63 | -1.69E-46 |
| MS.gene050670 | MS.gene066406 | 0.834857 | 2.35E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene066406 | 0.800612 | 1.33E-48 | -1.69E-46 |
| MS.gene05081 | MS.gene066406 | 0.816823 | 4.53E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene066406 | 0.813748 | 2.19E-51 | -1.69E-46 |
| MS.gene051521 | MS.gene066406 | 0.826473 | 2.66E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene066406 | 0.868862 | 4.76E-66 | -1.69E-46 |
| MS.gene051588 | MS.gene066406 | 0.831205 | 1.90E-55 | -1.69E-46 |
| MS.gene051734 | MS.gene066406 | 0.804428 | 2.17E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene066406 | 0.858532 | 7.72E-63 | -1.69E-46 |
| MS.gene051941 | MS.gene066406 | 0.843995 | 9.94E-59 | -1.69E-46 |
| MS.gene052011 | MS.gene066406 | -0.832753 | 7.90E-56 | -1.69E-46 |
| MS.gene052134 | MS.gene066406 | 0.838597 | 2.62E-57 | -1.69E-46 |
| MS.gene052135 | MS.gene066406 | 0.834394 | 3.07E-56 | -1.69E-46 |
| MS.gene052136 | MS.gene066406 | 0.832808 | 7.65E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene066406 | 0.802432 | 5.63E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene066406 | 0.878279 | 3.19E-69 | -1.69E-46 |
| MS.gene052414 | MS.gene066406 | 0.899036 | 2.95E-77 | -1.69E-46 |
| MS.gene052469 | MS.gene066406 | 0.839477 | 1.55E-57 | -1.69E-46 |
| MS.gene052501 | MS.gene066406 | 0.819488 | 1.13E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene066406 | 0.81962 | 1.06E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene066406 | 0.839959 | 1.16E-57 | -1.69E-46 |
| MS.gene052999 | MS.gene066406 | 0.81857 | 1.83E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene066406 | 0.86932 | 3.38E-66 | -1.69E-46 |
| MS.gene053318 | MS.gene066406 | 0.846661 | 1.89E-59 | -1.69E-46 |
| MS.gene05335 | MS.gene066406 | 0.809313 | 2.01E-50 | -1.69E-46 |
| MS.gene05383 | MS.gene066406 | 0.802004 | 6.89E-49 | -1.69E-46 |
| MS.gene053889 | MS.gene066406 | 0.809431 | 1.90E-50 | -1.69E-46 |
| MS.gene054102 | MS.gene066406 | 0.803967 | 2.71E-49 | -1.69E-46 |
| MS.gene054107 | MS.gene066406 | 0.823504 | 1.34E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene066406 | 0.806295 | 8.82E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene066406 | 0.858756 | 6.62E-63 | -1.69E-46 |
| MS.gene054884 | MS.gene066406 | -0.81499 | 1.16E-51 | -1.69E-46 |
| MS.gene054920 | MS.gene066406 | 0.817439 | 3.30E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene066406 | 0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene05494 | MS.gene066406 | 0.824362 | 8.41E-54 | -1.69E-46 |
| MS.gene055159 | MS.gene066406 | -0.817725 | 2.84E-52 | -1.69E-46 |
| MS.gene055369 | MS.gene066406 | 0.864229 | 1.41E-64 | -1.69E-46 |
| MS.gene055539 | MS.gene066406 | 0.883229 | 5.35E-71 | -1.69E-46 |
| MS.gene05556 | MS.gene066406 | 0.814681 | 1.36E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene066406 | 0.917216 | 6.95E-86 | -1.69E-46 |
| MS.gene055744 | MS.gene066406 | 0.921213 | 4.77E-88 | -1.69E-46 |
| MS.gene055893 | MS.gene066406 | 0.800102 | 1.69E-48 | -1.69E-46 |
| MS.gene055909 | MS.gene066406 | 0.843261 | 1.56E-58 | -1.69E-46 |
| MS.gene055911 | MS.gene066406 | 0.842786 | 2.09E-58 | -1.69E-46 |
| MS.gene056166 | MS.gene066406 | 0.85313 | 2.93E-61 | -1.69E-46 |
| MS.gene056346 | MS.gene066406 | 0.803897 | 2.80E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene066406 | 0.800931 | 1.14E-48 | -1.69E-46 |
| MS.gene056514 | MS.gene066406 | 0.854679 | 1.05E-61 | -1.69E-46 |
| MS.gene056877 | MS.gene066406 | 0.847664 | 1.00E-59 | -1.69E-46 |
| MS.gene057019 | MS.gene066406 | 0.872467 | 3.11E-67 | -1.69E-46 |
| MS.gene057076 | MS.gene066406 | 0.800651 | 1.30E-48 | -1.69E-46 |
| MS.gene057124 | MS.gene066406 | 0.825599 | 4.29E-54 | -1.69E-46 |
| MS.gene057289 | MS.gene066406 | 0.82272 | 2.04E-53 | -1.69E-46 |
| MS.gene057396 | MS.gene066406 | 0.80548 | 1.31E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene066406 | 0.80807 | 3.71E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene066406 | 0.814911 | 1.21E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene066406 | 0.810928 | 9.03E-51 | -1.69E-46 |
| MS.gene057825 | MS.gene066406 | 0.815285 | 1.00E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene066406 | 0.839061 | 1.98E-57 | -1.69E-46 |
| MS.gene058090 | MS.gene066406 | 0.844667 | 6.56E-59 | -1.69E-46 |
| MS.gene058120 | MS.gene066406 | 0.859855 | 3.10E-63 | -1.69E-46 |
| MS.gene058130 | MS.gene066406 | 0.807508 | 4.89E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene066406 | 0.829756 | 4.31E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene066406 | 0.800087 | 1.70E-48 | -1.69E-46 |
| MS.gene058444 | MS.gene066406 | 0.868382 | 6.81E-66 | -1.69E-46 |
| MS.gene058448 | MS.gene066406 | 0.804093 | 2.55E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene066406 | 0.872086 | 4.17E-67 | -1.69E-46 |
| MS.gene058948 | MS.gene066406 | 0.865045 | 7.85E-65 | -1.69E-46 |
| MS.gene059011 | MS.gene066406 | 0.803092 | 4.11E-49 | -1.69E-46 |
| MS.gene059303 | MS.gene066406 | 0.826104 | 3.26E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene066406 | 0.844418 | 7.65E-59 | -1.69E-46 |
| MS.gene059517 | MS.gene066406 | 0.801528 | 8.63E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene066406 | 0.814046 | 1.88E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene066406 | 0.829662 | 4.54E-55 | -1.69E-46 |
| MS.gene059868 | MS.gene066406 | 0.841025 | 6.10E-58 | -1.69E-46 |
| MS.gene059946 | MS.gene066406 | 0.818888 | 1.55E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene066406 | 0.882992 | 6.54E-71 | -1.69E-46 |
| MS.gene060485 | MS.gene066406 | 0.816215 | 6.20E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene066406 | 0.815026 | 1.14E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene066406 | 0.810851 | 9.39E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene066406 | 0.856481 | 3.13E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066406.t1 | MTR_1g052135 | 97.436 | 507 | 13 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1019 |
| MS.gene066406.t1 | MTR_1g052135 | 98.118 | 372 | 7 | 0 | 136 | 507 | 1 | 372 | 0.0 | 751 |
| MS.gene066406.t1 | MTR_1g052135 | 96.755 | 339 | 11 | 0 | 1 | 339 | 1 | 339 | 0.0 | 681 |
| MS.gene066406.t1 | MTR_1g073130 | 38.352 | 352 | 207 | 5 | 113 | 459 | 122 | 468 | 2.77e-76 | 249 |
| MS.gene066406.t1 | MTR_8g088150 | 35.326 | 368 | 223 | 8 | 100 | 461 | 86 | 444 | 1.83e-67 | 224 |
| MS.gene066406.t1 | MTR_8g088150 | 29.630 | 270 | 171 | 8 | 100 | 361 | 86 | 344 | 1.11e-33 | 131 |
| MS.gene066406.t1 | MTR_8g088150 | 29.297 | 256 | 162 | 8 | 100 | 347 | 86 | 330 | 6.53e-29 | 117 |
| MS.gene066406.t1 | MTR_8g088150 | 32.418 | 182 | 108 | 6 | 100 | 273 | 86 | 260 | 7.00e-18 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066406.t1 | AT3G57680 | 75.744 | 437 | 101 | 3 | 75 | 507 | 84 | 519 | 0.0 | 689 |
| MS.gene066406.t1 | AT3G57680 | 75.135 | 370 | 88 | 2 | 142 | 507 | 1 | 370 | 0.0 | 578 |
| MS.gene066406.t1 | AT3G57680 | 75.135 | 370 | 88 | 2 | 142 | 507 | 1 | 370 | 0.0 | 578 |
| MS.gene066406.t1 | AT4G17740 | 40.227 | 353 | 199 | 6 | 113 | 459 | 124 | 470 | 1.41e-77 | 252 |
| MS.gene066406.t1 | AT4G17740 | 40.227 | 353 | 199 | 6 | 113 | 459 | 134 | 480 | 2.04e-77 | 252 |
| MS.gene066406.t1 | AT5G46390 | 33.516 | 364 | 227 | 6 | 104 | 461 | 114 | 468 | 1.25e-59 | 204 |
| MS.gene066406.t1 | AT5G46390 | 27.491 | 291 | 196 | 6 | 104 | 388 | 114 | 395 | 3.34e-30 | 122 |
Find 115 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAACAAACCTACCAAATT+TGG | 0.155558 | 1.3:-36298727 | None:intergenic |
| TAATGCATGAATCTGCTTCT+AGG | 0.234485 | 1.3:-36304183 | None:intergenic |
| TGAAGAGAAGGAGGTGAATA+AGG | 0.261653 | 1.3:+36298816 | MS.gene066406:CDS |
| TAAAGTACCAAAACCAAATT+TGG | 0.279525 | 1.3:+36298714 | MS.gene066406:CDS |
| AAACCTACCAAATTTGGTTT+TGG | 0.289069 | 1.3:-36298721 | None:intergenic |
| GATGAATTAGTTGAAATAAA+TGG | 0.303515 | 1.3:+36301337 | MS.gene066406:CDS |
| TGAGATTGAAGTCTTATCTT+TGG | 0.310288 | 1.3:-36304158 | None:intergenic |
| TCTGCAGGGGAGAGGCTTAA+TGG | 0.311415 | 1.3:+36301505 | MS.gene066406:intron |
| GTTTGTTTCCTCGTAGGTTA+TGG | 0.324357 | 1.3:+36298740 | MS.gene066406:CDS |
| TGAAGCATGGGGTTTGATTC+GGG | 0.349053 | 1.3:+36300191 | MS.gene066406:CDS |
| TTGAAGCATGGGGTTTGATT+CGG | 0.352478 | 1.3:+36300190 | MS.gene066406:CDS |
| AGAAGCAGATTCATGCATTA+TGG | 0.353453 | 1.3:+36304186 | MS.gene066406:CDS |
| TGACATGCGAAATGCTATTC+AGG | 0.354095 | 1.3:+36302659 | MS.gene066406:CDS |
| CTGACCAAATGTCCTGTTCT+TGG | 0.355413 | 1.3:-36301035 | None:intergenic |
| TCTGTTGTGCACTGCACGTC+TGG | 0.362781 | 1.3:-36304106 | None:intergenic |
| ACCTCAGGTGCCCGTGAAAC+AGG | 0.369491 | 1.3:-36298967 | None:intergenic |
| CTTGTGGGGAACAAAACATT+TGG | 0.382361 | 1.3:+36303554 | MS.gene066406:CDS |
| TCTTTGGTTGATAGTTCCTT+TGG | 0.384951 | 1.3:-36304142 | None:intergenic |
| TGTTCAAGAAACAGTCCCTT+TGG | 0.389416 | 1.3:-36304239 | None:intergenic |
| GGTGCAGCACAGAGGCTTAG+AGG | 0.393697 | 1.3:+36301541 | MS.gene066406:CDS |
| CGTGATGCCCATGTTGTTGT+TGG | 0.405184 | 1.3:-36298769 | None:intergenic |
| TTCGTACTTACAGGAATATC+AGG | 0.418545 | 1.3:+36300953 | MS.gene066406:intron |
| GGTGAATAAGGTAGTGGTAG+TGG | 0.419882 | 1.3:+36298828 | MS.gene066406:CDS |
| ATTTGGAAAAGGAAAGATTC+AGG | 0.435352 | 1.3:+36303571 | MS.gene066406:CDS |
| TGAGCCAAGAACAGGACATT+TGG | 0.445795 | 1.3:+36301031 | MS.gene066406:CDS |
| GTTGCTCAGATGTGGTTAGA+TGG | 0.450686 | 1.3:+36302862 | MS.gene066406:CDS |
| AACGGTCGAGCTATTCTTGT+GGG | 0.453441 | 1.3:+36303539 | MS.gene066406:CDS |
| GTCGTTTGAGGTTGAAGAGA+AGG | 0.458986 | 1.3:+36298804 | MS.gene066406:CDS |
| GAAGAGGAAGGTGTCGTTTG+AGG | 0.459539 | 1.3:+36298792 | MS.gene066406:CDS |
| TGAATACCGGCACGAGCAGC+TGG | 0.467849 | 1.3:-36301307 | None:intergenic |
| AAACAGGAAAAGCGACAGTA+AGG | 0.470276 | 1.3:-36298951 | None:intergenic |
| ATAAATGTTGAGCCAAGAAC+AGG | 0.474577 | 1.3:+36301023 | MS.gene066406:CDS |
| AATGCATGAATCTGCTTCTA+GGG | 0.476986 | 1.3:-36304182 | None:intergenic |
| GGGAACAAAACATTTGGAAA+AGG | 0.480082 | 1.3:+36303560 | MS.gene066406:CDS |
| TGAGGATCTGTGAGGAATGA+TGG | 0.483757 | 1.3:-36302141 | None:intergenic |
| GGAATGATGGCACTTGATAT+TGG | 0.493428 | 1.3:-36302128 | None:intergenic |
| AAGAACACTTGTTGAAGCAT+GGG | 0.496612 | 1.3:+36300179 | MS.gene066406:CDS |
| ATGTCCATTGATCATATTGA+TGG | 0.496967 | 1.3:-36302932 | None:intergenic |
| TCCTGTTTCACGGGCACCTG+AGG | 0.498802 | 1.3:+36298966 | MS.gene066406:CDS |
| GAAGGAGGTGAATAAGGTAG+TGG | 0.501122 | 1.3:+36298822 | MS.gene066406:CDS |
| CACTAGAATTATTAGTCCGA+AGG | 0.501167 | 1.3:+36300532 | MS.gene066406:CDS |
| GGTTGACAATTTCACATAGC+CGG | 0.503195 | 1.3:-36302183 | None:intergenic |
| TCACCCATCAATATGATCAA+TGG | 0.506597 | 1.3:+36302928 | MS.gene066406:CDS |
| GAAATTGTCAACCTTCTCTC+AGG | 0.507010 | 1.3:+36302193 | MS.gene066406:CDS |
| CAGAGGCTTAGAGGGAATGC+TGG | 0.507723 | 1.3:+36301550 | MS.gene066406:CDS |
| CAGGGTGGTTTGGTAAAAGC+AGG | 0.508692 | 1.3:+36302832 | MS.gene066406:intron |
| GATCCTACATTTAATCATCA+AGG | 0.509526 | 1.3:+36300225 | MS.gene066406:CDS |
| TGAACATGAGTTGGATATGA+AGG | 0.513377 | 1.3:+36304213 | MS.gene066406:CDS |
| CGACCTGATCTATGTCATGA+AGG | 0.514048 | 1.3:-36304075 | None:intergenic |
| TTCATGACATAGATCAGGTC+GGG | 0.516139 | 1.3:+36304077 | MS.gene066406:CDS |
| AATGGAAACTTGCAAGGAGT+TGG | 0.520255 | 1.3:+36300993 | MS.gene066406:CDS |
| AAAGAACACTTGTTGAAGCA+TGG | 0.521686 | 1.3:+36300178 | MS.gene066406:CDS |
| TTCATCTCCATGATGAATAC+CGG | 0.522379 | 1.3:-36301320 | None:intergenic |
| GTGCAGCACAGAGGCTTAGA+GGG | 0.523821 | 1.3:+36301542 | MS.gene066406:CDS |
| TGATCTATGTCATGAAGGGC+TGG | 0.525259 | 1.3:-36304070 | None:intergenic |
| AACAGTCCAGCTGCTCGTGC+CGG | 0.526284 | 1.3:+36301301 | MS.gene066406:CDS |
| TCACAGATCCTCAGAAGGGC+AGG | 0.527833 | 1.3:+36302151 | MS.gene066406:CDS |
| GAATATCAGGGATTTAGAAT+CGG | 0.529054 | 1.3:+36300966 | MS.gene066406:CDS |
| TATGGTAGCTGAACATGAGT+TGG | 0.531686 | 1.3:+36304204 | MS.gene066406:CDS |
| GGATTTAGAATCGGAAGTAA+TGG | 0.534089 | 1.3:+36300975 | MS.gene066406:CDS |
| AGCCCTTCATGACATAGATC+AGG | 0.537489 | 1.3:+36304072 | MS.gene066406:CDS |
| GCTGGGGCATTACATGATAA+CGG | 0.540171 | 1.3:+36303521 | MS.gene066406:CDS |
| AGGGATTGAGAGAGAGCTGT+TGG | 0.547536 | 1.3:-36298931 | None:intergenic |
| TGGTAGGTTTGTTTCCTCGT+AGG | 0.548540 | 1.3:+36298734 | MS.gene066406:CDS |
| GTACCAAAACCAAATTTGGT+AGG | 0.549119 | 1.3:+36298718 | MS.gene066406:CDS |
| ATACCTTGATGATTAAATGT+AGG | 0.550456 | 1.3:-36300228 | None:intergenic |
| GTACTCACAATCACTACAAG+TGG | 0.553433 | 1.3:-36302970 | None:intergenic |
| GCTCGTGCCGGTATTCATCA+TGG | 0.555089 | 1.3:+36301313 | MS.gene066406:CDS |
| GCCTTGATGTTGCTCAGATG+TGG | 0.555679 | 1.3:+36302854 | MS.gene066406:CDS |
| ACTCATACATACTTGATCTA+CGG | 0.556612 | 1.3:+36302703 | MS.gene066406:CDS |
| GTGAATACGATTGATAGAGA+TGG | 0.558990 | 1.3:+36302898 | MS.gene066406:CDS |
| GATCTGATTCTGCAGGGGAG+AGG | 0.559857 | 1.3:+36301497 | MS.gene066406:intron |
| TTGGCTCAACATTTATGAAG+AGG | 0.560601 | 1.3:-36301016 | None:intergenic |
| GGACTAATAATTCTAGTGAA+AGG | 0.566046 | 1.3:-36300527 | None:intergenic |
| TGCCCCAGCTAAAATCTCAC+TGG | 0.567585 | 1.3:-36303507 | None:intergenic |
| GTTTGAGGTTGAAGAGAAGG+AGG | 0.567938 | 1.3:+36298807 | MS.gene066406:CDS |
| CAACATGGGCATCACGGAAG+AGG | 0.568371 | 1.3:+36298776 | MS.gene066406:CDS |
| GGTTACTACCAACAACAACA+TGG | 0.570072 | 1.3:+36298761 | MS.gene066406:CDS |
| AGTGTCACTCAGCTTCATGA+TGG | 0.570563 | 1.3:+36304010 | MS.gene066406:CDS |
| GAGAGCTTGATATACTCCCT+TGG | 0.574347 | 1.3:-36302104 | None:intergenic |
| TGGAACAACTGTTACAGTAA+AGG | 0.574531 | 1.3:+36301570 | MS.gene066406:CDS |
| CAACAACAACATGGGCATCA+CGG | 0.583305 | 1.3:+36298770 | MS.gene066406:CDS |
| TCTTCTGCTCACCTGAGAGA+AGG | 0.584131 | 1.3:-36302204 | None:intergenic |
| TGGATATGAAGGATTCCAAA+GGG | 0.591184 | 1.3:+36304224 | MS.gene066406:CDS |
| TAATTTAGGTTAAATTACCA+AGG | 0.597741 | 1.3:+36302087 | MS.gene066406:intron |
| AATAAGGTAGTGGTAGTGGA+AGG | 0.603341 | 1.3:+36298832 | MS.gene066406:CDS |
| ACCACATCTGAGCAACATCA+AGG | 0.604021 | 1.3:-36302855 | None:intergenic |
| AGAACACTTGTTGAAGCATG+GGG | 0.604949 | 1.3:+36300180 | MS.gene066406:CDS |
| GCTGCATCAGCTGAGTTCAA+AGG | 0.605499 | 1.3:-36300464 | None:intergenic |
| GGAAGTAATGGAAACTTGCA+AGG | 0.605746 | 1.3:+36300987 | MS.gene066406:CDS |
| ATTCCTCACAGATCCTCAGA+AGG | 0.609415 | 1.3:+36302146 | MS.gene066406:CDS |
| GACCTGATCTATGTCATGAA+GGG | 0.610507 | 1.3:-36304074 | None:intergenic |
| AATTTAGGTTAAATTACCAA+GGG | 0.612832 | 1.3:+36302088 | MS.gene066406:intron |
| GAAGTTGCAGCAAACAATGG+TGG | 0.613750 | 1.3:+36300433 | MS.gene066406:CDS |
| TCGTACTTACAGGAATATCA+GGG | 0.618631 | 1.3:+36300954 | MS.gene066406:intron |
| AGTGGAATGCTTTCTACACT+CGG | 0.620095 | 1.3:+36300500 | MS.gene066406:CDS |
| AACAGGAAAAGCGACAGTAA+GGG | 0.624915 | 1.3:-36298950 | None:intergenic |
| ATGGGCATCACGGAAGAGGA+AGG | 0.625191 | 1.3:+36298780 | MS.gene066406:CDS |
| GTTAGATGGAGATGAGACTC+TGG | 0.626212 | 1.3:+36302876 | MS.gene066406:CDS |
| TTGGATATGAAGGATTCCAA+AGG | 0.629055 | 1.3:+36304223 | MS.gene066406:CDS |
| TATGAAGTTGCAGCAAACAA+TGG | 0.629584 | 1.3:+36300430 | MS.gene066406:CDS |
| CTTAATGGCATTGATAGTGA+AGG | 0.632924 | 1.3:+36301520 | MS.gene066406:CDS |
| AGAAATGCTTAATTCGCCAA+AGG | 0.634008 | 1.3:+36304126 | MS.gene066406:CDS |
| CTTCATGACATAGATCAGGT+CGG | 0.643951 | 1.3:+36304076 | MS.gene066406:CDS |
| TTCCTCACAGATCCTCAGAA+GGG | 0.645666 | 1.3:+36302147 | MS.gene066406:CDS |
| TAACGGTCGAGCTATTCTTG+TGG | 0.650372 | 1.3:+36303538 | MS.gene066406:CDS |
| GTTACTACCAACAACAACAT+GGG | 0.656333 | 1.3:+36298762 | MS.gene066406:CDS |
| TGTCCATTGATCATATTGAT+GGG | 0.684015 | 1.3:-36302931 | None:intergenic |
| TATCCTCAACAGGTCAACGA+GGG | 0.687280 | 1.3:+36303473 | MS.gene066406:intron |
| ACGGTCGAGCTATTCTTGTG+GGG | 0.693767 | 1.3:+36303540 | MS.gene066406:CDS |
| TGCCCTTCTGAGGATCTGTG+AGG | 0.713131 | 1.3:-36302149 | None:intergenic |
| TAGAAACTCTTATATCCGTG+AGG | 0.718823 | 1.3:+36301935 | MS.gene066406:CDS |
| GTATCCTCAACAGGTCAACG+AGG | 0.727923 | 1.3:+36303472 | MS.gene066406:intron |
| ATAGTGAAGGTGCAGCACAG+AGG | 0.775625 | 1.3:+36301533 | MS.gene066406:CDS |
| GGTAGTAACCATAACCTACG+AGG | 0.780903 | 1.3:-36298748 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAACCTAAATTATATAT+TGG | - | chr1.3:36302082-36302101 | None:intergenic | 10.0% |
| !! | GAATAATACATAATATATAA+AGG | - | chr1.3:36299395-36299414 | None:intergenic | 10.0% |
| !!! | ATAACTTTTAAAAATATGAA+AGG | + | chr1.3:36299464-36299483 | MS.gene066406:intron | 10.0% |
| !!! | ATATGATTTTTTTTCTTTAT+GGG | - | chr1.3:36299814-36299833 | None:intergenic | 10.0% |
| !!! | TAACTTTTAAAAATATGAAA+GGG | + | chr1.3:36299465-36299484 | MS.gene066406:intron | 10.0% |
| !!! | TCAATTTGTTTTAAAAAAAA+TGG | - | chr1.3:36299569-36299588 | None:intergenic | 10.0% |
| !!! | TTATTTTTATTGCTTTTTAT+TGG | + | chr1.3:36299881-36299900 | MS.gene066406:intron | 10.0% |
| !! | AATAAAAATAATACCAACAT+GGG | - | chr1.3:36299872-36299891 | None:intergenic | 15.0% |
| !! | ACATAAACATTTATATGATA+AGG | + | chr1.3:36302545-36302564 | MS.gene066406:intron | 15.0% |
| !! | AGACAATCATAATTTAAAAA+CGG | - | chr1.3:36301222-36301241 | None:intergenic | 15.0% |
| !! | ATATGAATGATAAAAAATTC+AGG | - | chr1.3:36303346-36303365 | None:intergenic | 15.0% |
| !! | ATATTAAGATAAAGTTTGTA+CGG | - | chr1.3:36302315-36302334 | None:intergenic | 15.0% |
| !! | CATAAAGAAAAAAAATCATA+TGG | + | chr1.3:36299813-36299832 | MS.gene066406:intron | 15.0% |
| !! | GTATCTTACTTTAATTATAA+GGG | + | chr1.3:36300828-36300847 | MS.gene066406:intron | 15.0% |
| !! | TGTATCTTACTTTAATTATA+AGG | + | chr1.3:36300827-36300846 | MS.gene066406:intron | 15.0% |
| !!! | AATTAAAGTCTTATGTTTAA+CGG | + | chr1.3:36300927-36300946 | MS.gene066406:intron | 15.0% |
| !!! | AATTTTCTTTTGTTTGAAAA+TGG | + | chr1.3:36301475-36301494 | MS.gene066406:intron | 15.0% |
| !!! | ATATTTTAGAATAACTAACT+TGG | - | chr1.3:36301369-36301388 | None:intergenic | 15.0% |
| !!! | ATTTTTCATGATTTTTCTTT+TGG | - | chr1.3:36303671-36303690 | None:intergenic | 15.0% |
| !!! | CATATGATTTTTTTTCTTTA+TGG | - | chr1.3:36299815-36299834 | None:intergenic | 15.0% |
| !!! | CTTTATTTTATCTTTTGTTT+TGG | + | chr1.3:36302511-36302530 | MS.gene066406:intron | 15.0% |
| !!! | TTTTGTAGTTTTTTTTCTTA+GGG | - | chr1.3:36299192-36299211 | None:intergenic | 15.0% |
| !!! | TTTTTGCATTATAATTCAAA+GGG | + | chr1.3:36299942-36299961 | MS.gene066406:intron | 15.0% |
| !! | AAAAAACAAAACATCATTGT+AGG | - | chr1.3:36303624-36303643 | None:intergenic | 20.0% |
| !! | AAAAAGTAGTAACTTAAGAT+AGG | + | chr1.3:36300618-36300637 | MS.gene066406:intron | 20.0% |
| !! | AAGAAAAATCATGAAAAATG+AGG | + | chr1.3:36303672-36303691 | MS.gene066406:intron | 20.0% |
| !! | AATGTTAAAAGTCATATTTG+TGG | + | chr1.3:36300852-36300871 | MS.gene066406:intron | 20.0% |
| !! | AATTTACAATATTCCATTGA+TGG | + | chr1.3:36302055-36302074 | MS.gene066406:intron | 20.0% |
| !! | ACAAGAATGATTAAAAGAAA+TGG | - | chr1.3:36303261-36303280 | None:intergenic | 20.0% |
| !! | ACTAAATAAAACTAGGAATT+TGG | + | chr1.3:36299969-36299988 | MS.gene066406:intron | 20.0% |
| !! | ATCATGTGTTACAAAATAAA+AGG | - | chr1.3:36303028-36303047 | None:intergenic | 20.0% |
| !! | CAATAAAAATAATACCAACA+TGG | - | chr1.3:36299873-36299892 | None:intergenic | 20.0% |
| !! | CATTATGTAACAAAAAATAC+TGG | - | chr1.3:36303599-36303618 | None:intergenic | 20.0% |
| !! | CTTTGAATTATAATGCAAAA+AGG | - | chr1.3:36299943-36299962 | None:intergenic | 20.0% |
| !! | GATGAATTAGTTGAAATAAA+TGG | + | chr1.3:36301337-36301356 | MS.gene066406:CDS | 20.0% |
| !! | TAAAAATATCTGAAAATCAC+AGG | + | chr1.3:36301258-36301277 | MS.gene066406:intron | 20.0% |
| !! | TAACTTATCAAAATATTGTG+TGG | + | chr1.3:36302468-36302487 | MS.gene066406:intron | 20.0% |
| !! | TATTAAGATAAAGTTTGTAC+GGG | - | chr1.3:36302314-36302333 | None:intergenic | 20.0% |
| !! | TCATGTGTTACAAAATAAAA+GGG | - | chr1.3:36303027-36303046 | None:intergenic | 20.0% |
| !!! | AAAAAACTAATTTTAGAAGG+AGG | - | chr1.3:36301134-36301153 | None:intergenic | 20.0% |
| !!! | AACTGAAATTTTCATGAAAA+TGG | - | chr1.3:36302746-36302765 | None:intergenic | 20.0% |
| !!! | AATGTTATTTATAAGACCTT+CGG | - | chr1.3:36300551-36300570 | None:intergenic | 20.0% |
| !!! | AATTTAGGTTAAATTACCAA+GGG | + | chr1.3:36302088-36302107 | MS.gene066406:intron | 20.0% |
| !!! | AATTTTCCATTCAAAATTCT+TGG | + | chr1.3:36301159-36301178 | MS.gene066406:intron | 20.0% |
| !!! | AATTTTGAATGGAAAATTGA+AGG | - | chr1.3:36301157-36301176 | None:intergenic | 20.0% |
| !!! | AGGAAAAAACTAATTTTAGA+AGG | - | chr1.3:36301137-36301156 | None:intergenic | 20.0% |
| !!! | CTTTTTGCATTATAATTCAA+AGG | + | chr1.3:36299941-36299960 | MS.gene066406:intron | 20.0% |
| !!! | GTTTTGTAGTTTTTTTTCTT+AGG | - | chr1.3:36299193-36299212 | None:intergenic | 20.0% |
| !!! | TAATTTAGGTTAAATTACCA+AGG | + | chr1.3:36302087-36302106 | MS.gene066406:intron | 20.0% |
| !!! | TGTTTTAAGGTCATATTAAT+TGG | + | chr1.3:36300741-36300760 | MS.gene066406:intron | 20.0% |
| !!! | TTTCTTTTTCTTGGAATTAT+GGG | + | chr1.3:36301744-36301763 | MS.gene066406:intron | 20.0% |
| !!! | TTTGTAGTTTTTTTTCTTAG+GGG | - | chr1.3:36299191-36299210 | None:intergenic | 20.0% |
| ! | AAAAGAAAACAATGTTTCGA+AGG | - | chr1.3:36301694-36301713 | None:intergenic | 25.0% |
| ! | AGTTAAGTAAAGTCTAACTA+AGG | - | chr1.3:36303143-36303162 | None:intergenic | 25.0% |
| ! | ATAGAAAATCAAGATGTGAA+AGG | - | chr1.3:36303399-36303418 | None:intergenic | 25.0% |
| ! | ATGCATTCTATATGCAAATT+TGG | - | chr1.3:36300303-36300322 | None:intergenic | 25.0% |
| ! | ATTAACAAACTCGAGTATTT+AGG | - | chr1.3:36300088-36300107 | None:intergenic | 25.0% |
| ! | ATTAACATTTCAGTTTCACA+AGG | - | chr1.3:36301458-36301477 | None:intergenic | 25.0% |
| ! | ATTATATATTGGACCATCAA+TGG | - | chr1.3:36302071-36302090 | None:intergenic | 25.0% |
| ! | ATTCAGGAAATGAAAAATCA+AGG | + | chr1.3:36302675-36302694 | MS.gene066406:CDS | 25.0% |
| ! | CAAAATTTACATGTCAACTA+TGG | - | chr1.3:36299305-36299324 | None:intergenic | 25.0% |
| ! | CAGTGAATGTTAAATTGATT+TGG | + | chr1.3:36303086-36303105 | MS.gene066406:intron | 25.0% |
| ! | CTTACTTGTAAACCTTAAAA+AGG | - | chr1.3:36299350-36299369 | None:intergenic | 25.0% |
| ! | GATGGTCCAATATATAATTT+AGG | + | chr1.3:36302073-36302092 | MS.gene066406:intron | 25.0% |
| ! | GCAATAACATTACCATATAT+TGG | - | chr1.3:36300653-36300672 | None:intergenic | 25.0% |
| ! | TCATGAAAATGGTAAATTAC+AGG | - | chr1.3:36302735-36302754 | None:intergenic | 25.0% |
| ! | TTAAAAGTCATATTTGTGGT+TGG | + | chr1.3:36300856-36300875 | MS.gene066406:intron | 25.0% |
| ! | TTAAACAGAAAACACTCTTA+TGG | - | chr1.3:36303744-36303763 | None:intergenic | 25.0% |
| ! | TTAACAAACTCGAGTATTTA+GGG | - | chr1.3:36300087-36300106 | None:intergenic | 25.0% |
| !! | AAAAGTGTGTTAGAAAAAGA+GGG | + | chr1.3:36299104-36299123 | MS.gene066406:intron | 25.0% |
| !! | AAAATTTCAGGTAAAAACGT+AGG | - | chr1.3:36302808-36302827 | None:intergenic | 25.0% |
| !! | AAATTTTCAACTTTACCTCA+CGG | - | chr1.3:36301953-36301972 | None:intergenic | 25.0% |
| !! | AACTTTCAGTTTCTTTTTCT+TGG | + | chr1.3:36301735-36301754 | MS.gene066406:intron | 25.0% |
| !! | ACCTTGACTACTTTAAAAAA+TGG | + | chr1.3:36301775-36301794 | MS.gene066406:intron | 25.0% |
| !! | AGATCAACAAATCTGTTTTA+AGG | + | chr1.3:36300728-36300747 | MS.gene066406:intron | 25.0% |
| !! | ATACCTTGATGATTAAATGT+AGG | - | chr1.3:36300231-36300250 | None:intergenic | 25.0% |
| !! | CCTTGACTACTTTAAAAAAT+GGG | + | chr1.3:36301776-36301795 | MS.gene066406:intron | 25.0% |
| !! | GTTTCTTTTTCTTGGAATTA+TGG | + | chr1.3:36301743-36301762 | MS.gene066406:intron | 25.0% |
| !! | TAAAGTACCAAAACCAAATT+TGG | + | chr1.3:36298714-36298733 | MS.gene066406:CDS | 25.0% |
| !! | TTCTTTTTCTTGGAATTATG+GGG | + | chr1.3:36301745-36301764 | MS.gene066406:intron | 25.0% |
| !!! | AAAAGGAGTACTACTTATTT+TGG | - | chr1.3:36299926-36299945 | None:intergenic | 25.0% |
| !!! | AAAGGAGTACTACTTATTTT+GGG | - | chr1.3:36299925-36299944 | None:intergenic | 25.0% |
| !!! | AAATTTGGTTTTGGTACTTT+AGG | - | chr1.3:36298715-36298734 | None:intergenic | 25.0% |
| !!! | AAGAGTGTTTTCTGTTTAAA+AGG | + | chr1.3:36303745-36303764 | MS.gene066406:intron | 25.0% |
| !!! | ATCTGAAATTCACCTTTTTA+AGG | + | chr1.3:36299335-36299354 | MS.gene066406:intron | 25.0% |
| !!! | ATTTTGAAGTTCAAACACAA+AGG | - | chr1.3:36302038-36302057 | None:intergenic | 25.0% |
| !!! | CTTTTTAAGGTTTACAAGTA+AGG | + | chr1.3:36299348-36299367 | MS.gene066406:intron | 25.0% |
| !!! | GATTTTTTTTCTTTATGGGA+AGG | - | chr1.3:36299810-36299829 | None:intergenic | 25.0% |
| !!! | GTTTTGTTGATAATTCATCT+TGG | - | chr1.3:36303313-36303332 | None:intergenic | 25.0% |
| !!! | TTGTAGTTTTTTTTCTTAGG+GGG | - | chr1.3:36299190-36299209 | None:intergenic | 25.0% |
| !!! | TTTTGAAGTTCAAACACAAA+GGG | - | chr1.3:36302037-36302056 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCCTTAACTCAGT+TGG | - | chr1.3:36299421-36299440 | None:intergenic | 25.0% |
| AAACTTATCCTGTACCATAT+TGG | + | chr1.3:36302615-36302634 | MS.gene066406:intron | 30.0% | |
| AACAAAGTTGTCTTTCCAAA+AGG | + | chr1.3:36302586-36302605 | MS.gene066406:intron | 30.0% | |
| ACAAAGTTGTCTTTCCAAAA+GGG | + | chr1.3:36302587-36302606 | MS.gene066406:intron | 30.0% | |
| ACATGTATCAGTATTGTGTT+AGG | - | chr1.3:36303861-36303880 | None:intergenic | 30.0% | |
| ACTCATACATACTTGATCTA+CGG | + | chr1.3:36302703-36302722 | MS.gene066406:CDS | 30.0% | |
| ACTGCATGATCAATTGAAAT+CGG | - | chr1.3:36301102-36301121 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCTAC+TGG | + | chr1.3:36302349-36302368 | MS.gene066406:intron | 30.0% | |
| AGATTCACCTATAGAAAAAC+TGG | + | chr1.3:36302224-36302243 | MS.gene066406:intron | 30.0% | |
| ATCATTCTTGTATGTTTCTC+TGG | + | chr1.3:36303270-36303289 | MS.gene066406:intron | 30.0% | |
| ATCCATTTCTGTCAATCTTA+AGG | + | chr1.3:36303966-36303985 | MS.gene066406:intron | 30.0% | |
| ATGTCCATTGATCATATTGA+TGG | - | chr1.3:36302935-36302954 | None:intergenic | 30.0% | |
| ATTTGGAAAAGGAAAGATTC+AGG | + | chr1.3:36303571-36303590 | MS.gene066406:CDS | 30.0% | |
| CATGTATCAGTATTGTGTTA+GGG | - | chr1.3:36303860-36303879 | None:intergenic | 30.0% | |
| CTTGAAAACTTATCTTCTCT+AGG | + | chr1.3:36301899-36301918 | MS.gene066406:intron | 30.0% | |
| GAAACTATGATATTTCCCAA+TGG | - | chr1.3:36301597-36301616 | None:intergenic | 30.0% | |
| GATCCTACATTTAATCATCA+AGG | + | chr1.3:36300225-36300244 | MS.gene066406:CDS | 30.0% | |
| GGACTAATAATTCTAGTGAA+AGG | - | chr1.3:36300530-36300549 | None:intergenic | 30.0% | |
| GGGTACTACTAAATAAAACT+AGG | + | chr1.3:36299962-36299981 | MS.gene066406:intron | 30.0% | |
| GGTAATGTAATGTAGATATG+AGG | + | chr1.3:36303693-36303712 | MS.gene066406:intron | 30.0% | |
| TAACACAATACTGATACATG+TGG | + | chr1.3:36303860-36303879 | MS.gene066406:intron | 30.0% | |
| TAACTAAGGATTGTTCTAGT+CGG | - | chr1.3:36303129-36303148 | None:intergenic | 30.0% | |
| TAAGATTGACAGAAATGGAT+GGG | - | chr1.3:36303966-36303985 | None:intergenic | 30.0% | |
| TATGCAAATTTGGTACTTGA+AGG | - | chr1.3:36300293-36300312 | None:intergenic | 30.0% | |
| TATGGTACAGGATAAGTTTA+TGG | - | chr1.3:36302614-36302633 | None:intergenic | 30.0% | |
| TATTCTTACCAACTGAGTTA+AGG | + | chr1.3:36299410-36299429 | MS.gene066406:intron | 30.0% | |
| TCGACAGATCAAATAACAAA+AGG | + | chr1.3:36300383-36300402 | MS.gene066406:intron | 30.0% | |
| TGCATCATACTAACATCTAT+TGG | + | chr1.3:36300318-36300337 | MS.gene066406:intron | 30.0% | |
| TGTCCATTGATCATATTGAT+GGG | - | chr1.3:36302934-36302953 | None:intergenic | 30.0% | |
| TTAAAAACGGAAATCAACAC+AGG | - | chr1.3:36301209-36301228 | None:intergenic | 30.0% | |
| TTAAGATTGACAGAAATGGA+TGG | - | chr1.3:36303967-36303986 | None:intergenic | 30.0% | |
| TTCCTTAAGATTGACAGAAA+TGG | - | chr1.3:36303971-36303990 | None:intergenic | 30.0% | |
| ! | AATTCATCTTGGTAACATAG+AGG | - | chr1.3:36303302-36303321 | None:intergenic | 30.0% |
| ! | ATTTTGCTACTGTAACAAAG+AGG | - | chr1.3:36304042-36304061 | None:intergenic | 30.0% |
| ! | CTACTACCAAGAATTTTGAA+TGG | - | chr1.3:36301168-36301187 | None:intergenic | 30.0% |
| ! | GAAAAAGAGGGTTTAAAACA+AGG | + | chr1.3:36299116-36299135 | MS.gene066406:intron | 30.0% |
| ! | GAAAAGTGTGTTAGAAAAAG+AGG | + | chr1.3:36299103-36299122 | MS.gene066406:intron | 30.0% |
| ! | GAATATCAGGGATTTAGAAT+CGG | + | chr1.3:36300966-36300985 | MS.gene066406:CDS | 30.0% |
| ! | GTAAGATACATTTGATGATC+CGG | - | chr1.3:36300817-36300836 | None:intergenic | 30.0% |
| ! | TACACTTTTGCTTGTAGATT+GGG | + | chr1.3:36300406-36300425 | MS.gene066406:intron | 30.0% |
| ! | TAGACATCCAGTTTTTCTAT+AGG | - | chr1.3:36302234-36302253 | None:intergenic | 30.0% |
| ! | TGAGATTGAAGTCTTATCTT+TGG | - | chr1.3:36304161-36304180 | None:intergenic | 30.0% |
| ! | TTACCTGAAATTTTGTTGCA+GGG | + | chr1.3:36302814-36302833 | MS.gene066406:intron | 30.0% |
| ! | TTTACCTGAAATTTTGTTGC+AGG | + | chr1.3:36302813-36302832 | MS.gene066406:intron | 30.0% |
| ! | TTTCAGTTTTACCACATCTT+TGG | + | chr1.3:36302758-36302777 | MS.gene066406:intron | 30.0% |
| ! | TTTTGCTACTGTAACAAAGA+GGG | - | chr1.3:36304041-36304060 | None:intergenic | 30.0% |
| !! | AAACCTACCAAATTTGGTTT+TGG | - | chr1.3:36298724-36298743 | None:intergenic | 30.0% |
| !! | AACTAATTTTAGAAGGAGGT+AGG | - | chr1.3:36301130-36301149 | None:intergenic | 30.0% |
| !! | ACTAATTTTAGAAGGAGGTA+GGG | - | chr1.3:36301129-36301148 | None:intergenic | 30.0% |
| !! | CAGATTTGTTGATCTAAGAA+TGG | - | chr1.3:36300723-36300742 | None:intergenic | 30.0% |
| !!! | CCCATTTTTTAAAGTAGTCA+AGG | - | chr1.3:36301779-36301798 | None:intergenic | 30.0% |
| !!! | GCAAAAAGTGCTTTTAGATT+TGG | + | chr1.3:36298868-36298887 | MS.gene066406:CDS | 30.0% |
| AAAATGGATCTGATTCTGCA+GGG | + | chr1.3:36301491-36301510 | MS.gene066406:intron | 35.0% | |
| AACTAAGGATTGTTCTAGTC+GGG | - | chr1.3:36303128-36303147 | None:intergenic | 35.0% | |
| AATGCATGAATCTGCTTCTA+GGG | - | chr1.3:36304185-36304204 | None:intergenic | 35.0% | |
| ACTTACTTTCGTTTCTTGGT+CGG | + | chr1.3:36300588-36300607 | MS.gene066406:intron | 35.0% | |
| AGAAATGCTTAATTCGCCAA+AGG | + | chr1.3:36304126-36304145 | MS.gene066406:CDS | 35.0% | |
| AGAAGCAGATTCATGCATTA+TGG | + | chr1.3:36304186-36304205 | MS.gene066406:CDS | 35.0% | |
| AGGATCATAGCTCCAATATA+TGG | + | chr1.3:36300638-36300657 | MS.gene066406:intron | 35.0% | |
| AGTGTACGAGAGATTTCTTA+TGG | + | chr1.3:36301802-36301821 | MS.gene066406:intron | 35.0% | |
| ATAAATGTTGAGCCAAGAAC+AGG | + | chr1.3:36301023-36301042 | MS.gene066406:CDS | 35.0% | |
| ATTGCCATTCATCAAACTAG+CGG | - | chr1.3:36303448-36303467 | None:intergenic | 35.0% | |
| CACCTGTTTCAAGAGAAATT+GGG | - | chr1.3:36303192-36303211 | None:intergenic | 35.0% | |
| CACTAGAATTATTAGTCCGA+AGG | + | chr1.3:36300532-36300551 | MS.gene066406:CDS | 35.0% | |
| CACTCTGTCAATAACCAATA+TGG | - | chr1.3:36302632-36302651 | None:intergenic | 35.0% | |
| CTGATACATGTGGTTATTAC+TGG | + | chr1.3:36303870-36303889 | MS.gene066406:intron | 35.0% | |
| GAAAATGACAAAACCCATGT+TGG | + | chr1.3:36299856-36299875 | MS.gene066406:intron | 35.0% | |
| GGAAACAAACCTACCAAATT+TGG | - | chr1.3:36298730-36298749 | None:intergenic | 35.0% | |
| GGGAACAAAACATTTGGAAA+AGG | + | chr1.3:36303560-36303579 | MS.gene066406:CDS | 35.0% | |
| GTACCAAAACCAAATTTGGT+AGG | + | chr1.3:36298718-36298737 | MS.gene066406:CDS | 35.0% | |
| GTCAATAACCAATATGGTAC+AGG | - | chr1.3:36302626-36302645 | None:intergenic | 35.0% | |
| GTGAATACGATTGATAGAGA+TGG | + | chr1.3:36302898-36302917 | MS.gene066406:CDS | 35.0% | |
| GTTACAATGCCAAATGTAAC+TGG | - | chr1.3:36300055-36300074 | None:intergenic | 35.0% | |
| GTTACATTTGGCATTGTAAC+TGG | + | chr1.3:36300055-36300074 | MS.gene066406:intron | 35.0% | |
| GTTACTACCAACAACAACAT+GGG | + | chr1.3:36298762-36298781 | MS.gene066406:CDS | 35.0% | |
| TAAGTGTGATAATACTCGCA+GGG | + | chr1.3:36300023-36300042 | MS.gene066406:intron | 35.0% | |
| TAATGCATGAATCTGCTTCT+AGG | - | chr1.3:36304186-36304205 | None:intergenic | 35.0% | |
| TAGAAACTCTTATATCCGTG+AGG | + | chr1.3:36301935-36301954 | MS.gene066406:CDS | 35.0% | |
| TATGAAGTTGCAGCAAACAA+TGG | + | chr1.3:36300430-36300449 | MS.gene066406:CDS | 35.0% | |
| TCACCCATCAATATGATCAA+TGG | + | chr1.3:36302928-36302947 | MS.gene066406:CDS | 35.0% | |
| TCGTACTTACAGGAATATCA+GGG | + | chr1.3:36300954-36300973 | MS.gene066406:intron | 35.0% | |
| TCTCACTTACTTTCGTTTCT+TGG | + | chr1.3:36300584-36300603 | MS.gene066406:intron | 35.0% | |
| TGCCACAGTTACAAAACATA+GGG | - | chr1.3:36299220-36299239 | None:intergenic | 35.0% | |
| TGGAACAACTGTTACAGTAA+AGG | + | chr1.3:36301570-36301589 | MS.gene066406:CDS | 35.0% | |
| TGGATATGAAGGATTCCAAA+GGG | + | chr1.3:36304224-36304243 | MS.gene066406:CDS | 35.0% | |
| TGTCCGAAACTAACATGTAT+CGG | + | chr1.3:36303827-36303846 | MS.gene066406:intron | 35.0% | |
| TGTTACAGTAAAGGTCCATT+GGG | + | chr1.3:36301579-36301598 | MS.gene066406:intron | 35.0% | |
| TTAGAGATCAAAACGATAGC+TGG | - | chr1.3:36302285-36302304 | None:intergenic | 35.0% | |
| TTCATCTCCATGATGAATAC+CGG | - | chr1.3:36301323-36301342 | None:intergenic | 35.0% | |
| TTCGTACTTACAGGAATATC+AGG | + | chr1.3:36300953-36300972 | MS.gene066406:intron | 35.0% | |
| TTGGATATGAAGGATTCCAA+AGG | + | chr1.3:36304223-36304242 | MS.gene066406:CDS | 35.0% | |
| TTGGCTCAACATTTATGAAG+AGG | - | chr1.3:36301019-36301038 | None:intergenic | 35.0% | |
| ! | AAAACTTGTTCCACATACAG+TGG | - | chr1.3:36299059-36299078 | None:intergenic | 35.0% |
| ! | AAACCCTTTTCAACTAAGCA+CGG | - | chr1.3:36300137-36300156 | None:intergenic | 35.0% |
| ! | AAAGAACACTTGTTGAAGCA+TGG | + | chr1.3:36300178-36300197 | MS.gene066406:CDS | 35.0% |
| ! | AAGAACACTTGTTGAAGCAT+GGG | + | chr1.3:36300179-36300198 | MS.gene066406:CDS | 35.0% |
| ! | ATCGCAACTTTGAGAAAGTT+AGG | - | chr1.3:36299162-36299181 | None:intergenic | 35.0% |
| ! | CTTTCTCAAAGTTGCGATTT+TGG | + | chr1.3:36299164-36299183 | MS.gene066406:intron | 35.0% |
| ! | GATAAGTTTATGGACCCTTT+TGG | - | chr1.3:36302604-36302623 | None:intergenic | 35.0% |
| ! | GCAATTTTTGTATCCTCAAC+AGG | + | chr1.3:36303463-36303482 | MS.gene066406:intron | 35.0% |
| ! | GGATTTAGAATCGGAAGTAA+TGG | + | chr1.3:36300975-36300994 | MS.gene066406:CDS | 35.0% |
| ! | GTACACTTTTGCTTGTAGAT+TGG | + | chr1.3:36300405-36300424 | MS.gene066406:intron | 35.0% |
| ! | GTTTTACCACATCTTTGGAT+CGG | + | chr1.3:36302763-36302782 | MS.gene066406:intron | 35.0% |
| ! | TCGCAACTTTGAGAAAGTTA+GGG | - | chr1.3:36299161-36299180 | None:intergenic | 35.0% |
| ! | TGAACATGAGTTGGATATGA+AGG | + | chr1.3:36304213-36304232 | MS.gene066406:CDS | 35.0% |
| ! | TTTTGTAACTGTGGCAGTTT+TGG | + | chr1.3:36299224-36299243 | MS.gene066406:intron | 35.0% |
| !! | CTAATTTTAGAAGGAGGTAG+GGG | - | chr1.3:36301128-36301147 | None:intergenic | 35.0% |
| !! | CTTAATGGCATTGATAGTGA+AGG | + | chr1.3:36301520-36301539 | MS.gene066406:CDS | 35.0% |
| !! | CTTGTTTTCGTAAGCTTTCT+AGG | + | chr1.3:36302444-36302463 | MS.gene066406:intron | 35.0% |
| !! | TCTTTGGTTGATAGTTCCTT+TGG | - | chr1.3:36304145-36304164 | None:intergenic | 35.0% |
| !! | TGTCAGCAACACTTTAGAAT+AGG | - | chr1.3:36300675-36300694 | None:intergenic | 35.0% |
| !!! | CATTCCACTGATTTTTGTGT+AGG | - | chr1.3:36300489-36300508 | None:intergenic | 35.0% |
| !!! | TTTGGTTTTGGTACTTTAGG+TGG | - | chr1.3:36298712-36298731 | None:intergenic | 35.0% |
| AAACAGGAAAAGCGACAGTA+AGG | - | chr1.3:36298954-36298973 | None:intergenic | 40.0% | |
| AAATGGATCTGATTCTGCAG+GGG | + | chr1.3:36301492-36301511 | MS.gene066406:intron | 40.0% | |
| AACAGGAAAAGCGACAGTAA+GGG | - | chr1.3:36298953-36298972 | None:intergenic | 40.0% | |
| AACCGATCTCGGGATTATTA+GGG | + | chr1.3:36303166-36303185 | MS.gene066406:intron | 40.0% | |
| AAGTGATTGGGTCTCTTAAG+TGG | + | chr1.3:36303052-36303071 | MS.gene066406:intron | 40.0% | |
| AATGGAAACTTGCAAGGAGT+TGG | + | chr1.3:36300993-36301012 | MS.gene066406:CDS | 40.0% | |
| ACACATGATCCACAAGTGAT+TGG | + | chr1.3:36303039-36303058 | MS.gene066406:intron | 40.0% | |
| ACGAAGACAGACATGAACAA+CGG | - | chr1.3:36303924-36303943 | None:intergenic | 40.0% | |
| ACTAAGGATTGTTCTAGTCG+GGG | - | chr1.3:36303127-36303146 | None:intergenic | 40.0% | |
| AGTGGAATGCTTTCTACACT+CGG | + | chr1.3:36300500-36300519 | MS.gene066406:CDS | 40.0% | |
| ATCCGGCGATTATAGTTCAT+TGG | - | chr1.3:36300800-36300819 | None:intergenic | 40.0% | |
| ATGAGGTGCATATATACTCC+AGG | + | chr1.3:36303710-36303729 | MS.gene066406:intron | 40.0% | |
| ATGTCTGTCTTCGTGCTTAT+GGG | + | chr1.3:36303930-36303949 | MS.gene066406:intron | 40.0% | |
| CAAACTCGAGTATTTAGGGA+CGG | - | chr1.3:36300083-36300102 | None:intergenic | 40.0% | |
| CAACCGTGCTTAGTTGAAAA+GGG | + | chr1.3:36300131-36300150 | MS.gene066406:intron | 40.0% | |
| CACATGATCCACAAGTGATT+GGG | + | chr1.3:36303040-36303059 | MS.gene066406:intron | 40.0% | |
| CCACAGTTACAAAACATAGG+GGG | - | chr1.3:36299218-36299237 | None:intergenic | 40.0% | |
| CGACTGTATGATAGAACTTG+TGG | + | chr1.3:36302386-36302405 | MS.gene066406:intron | 40.0% | |
| CTAAGTGTGATAATACTCGC+AGG | + | chr1.3:36300022-36300041 | MS.gene066406:intron | 40.0% | |
| CTGCCACAGTTACAAAACAT+AGG | - | chr1.3:36299221-36299240 | None:intergenic | 40.0% | |
| CTGTTACAGTAAAGGTCCAT+TGG | + | chr1.3:36301578-36301597 | MS.gene066406:intron | 40.0% | |
| CTTCATGACATAGATCAGGT+CGG | + | chr1.3:36304076-36304095 | MS.gene066406:CDS | 40.0% | |
| CTTGTGGGGAACAAAACATT+TGG | + | chr1.3:36303554-36303573 | MS.gene066406:CDS | 40.0% | |
| GAAAATGGATCTGATTCTGC+AGG | + | chr1.3:36301490-36301509 | MS.gene066406:intron | 40.0% | |
| GAAATTGTCAACCTTCTCTC+AGG | + | chr1.3:36302193-36302212 | MS.gene066406:CDS | 40.0% | |
| GACCTGATCTATGTCATGAA+GGG | - | chr1.3:36304077-36304096 | None:intergenic | 40.0% | |
| GCACCTGTTTCAAGAGAAAT+TGG | - | chr1.3:36303193-36303212 | None:intergenic | 40.0% | |
| GCCACAGTTACAAAACATAG+GGG | - | chr1.3:36299219-36299238 | None:intergenic | 40.0% | |
| GGAATGATGGCACTTGATAT+TGG | - | chr1.3:36302131-36302150 | None:intergenic | 40.0% | |
| GGTTACTACCAACAACAACA+TGG | + | chr1.3:36298761-36298780 | MS.gene066406:CDS | 40.0% | |
| GGTTGACAATTTCACATAGC+CGG | - | chr1.3:36302186-36302205 | None:intergenic | 40.0% | |
| GTTTGTTTCCTCGTAGGTTA+TGG | + | chr1.3:36298740-36298759 | MS.gene066406:CDS | 40.0% | |
| TAACGGTGATTCGTACTTAC+AGG | + | chr1.3:36300944-36300963 | MS.gene066406:intron | 40.0% | |
| TAATAATCCCGAGATCGGTT+GGG | - | chr1.3:36303166-36303185 | None:intergenic | 40.0% | |
| TATGGTAGCTGAACATGAGT+TGG | + | chr1.3:36304204-36304223 | MS.gene066406:CDS | 40.0% | |
| TCAACCGTGCTTAGTTGAAA+AGG | + | chr1.3:36300130-36300149 | MS.gene066406:intron | 40.0% | |
| TGAAGAGAAGGAGGTGAATA+AGG | + | chr1.3:36298816-36298835 | MS.gene066406:CDS | 40.0% | |
| TGACATGCGAAATGCTATTC+AGG | + | chr1.3:36302659-36302678 | MS.gene066406:CDS | 40.0% | |
| TGCCAATGAACTATAATCGC+CGG | + | chr1.3:36300795-36300814 | MS.gene066406:intron | 40.0% | |
| TTAAGAGACCCAATCACTTG+TGG | - | chr1.3:36303051-36303070 | None:intergenic | 40.0% | |
| TTCATGACATAGATCAGGTC+GGG | + | chr1.3:36304077-36304096 | MS.gene066406:CDS | 40.0% | |
| TTGAAGCATGGGGTTTGATT+CGG | + | chr1.3:36300190-36300209 | MS.gene066406:CDS | 40.0% | |
| ! | AAAAGGTGTGTACCAAGCAT+AGG | + | chr1.3:36303762-36303781 | MS.gene066406:intron | 40.0% |
| ! | AATTTTGTTGCAGGGTGGTT+TGG | + | chr1.3:36302822-36302841 | MS.gene066406:intron | 40.0% |
| ! | ACACTCTTTTCCACTGTATG+TGG | + | chr1.3:36299046-36299065 | MS.gene066406:intron | 40.0% |
| ! | AGAACACTTGTTGAAGCATG+GGG | + | chr1.3:36300180-36300199 | MS.gene066406:CDS | 40.0% |
| ! | AGGTTTACAAGTAAGGTGTC+TGG | + | chr1.3:36299355-36299374 | MS.gene066406:intron | 40.0% |
| ! | ATCTTGGTAACATAGAGGCA+TGG | - | chr1.3:36303297-36303316 | None:intergenic | 40.0% |
| ! | CAAACCGCTAGTTTGATGAA+TGG | + | chr1.3:36303441-36303460 | MS.gene066406:intron | 40.0% |
| ! | CGCAACTTTGAGAAAGTTAG+GGG | - | chr1.3:36299160-36299179 | None:intergenic | 40.0% |
| ! | GCAACTTTGAGAAAGTTAGG+GGG | - | chr1.3:36299159-36299178 | None:intergenic | 40.0% |
| ! | GCACCGATACATGTTAGTTT+CGG | - | chr1.3:36303833-36303852 | None:intergenic | 40.0% |
| ! | GGAAGTAATGGAAACTTGCA+AGG | + | chr1.3:36300987-36301006 | MS.gene066406:CDS | 40.0% |
| ! | GGTTTACAAGTAAGGTGTCT+GGG | + | chr1.3:36299356-36299375 | MS.gene066406:intron | 40.0% |
| ! | GTTTACAAGTAAGGTGTCTG+GGG | + | chr1.3:36299357-36299376 | MS.gene066406:intron | 40.0% |
| ! | TAACACACTTTTCTACTGCG+TGG | - | chr1.3:36299096-36299115 | None:intergenic | 40.0% |
| ! | TCTTGGTAGTAGCTAGAACT+CGG | + | chr1.3:36301176-36301195 | MS.gene066406:intron | 40.0% |
| !! | AATAAGGTAGTGGTAGTGGA+AGG | + | chr1.3:36298832-36298851 | MS.gene066406:CDS | 40.0% |
| !! | GTTGAAAAGGGTTTGTTGCT+AGG | + | chr1.3:36300143-36300162 | MS.gene066406:intron | 40.0% |
| AACGGTCGAGCTATTCTTGT+GGG | + | chr1.3:36303539-36303558 | MS.gene066406:CDS | 45.0% | |
| ACCACATCTGAGCAACATCA+AGG | - | chr1.3:36302858-36302877 | None:intergenic | 45.0% | |
| ACTTAACTCCCAACCGATCT+CGG | + | chr1.3:36303155-36303174 | MS.gene066406:intron | 45.0% | |
| AGCCCTTCATGACATAGATC+AGG | + | chr1.3:36304072-36304091 | MS.gene066406:CDS | 45.0% | |
| AGCGTAGACCGAGTCAAAAT+TGG | - | chr1.3:36299259-36299278 | None:intergenic | 45.0% | |
| ATTCCTCACAGATCCTCAGA+AGG | + | chr1.3:36302146-36302165 | MS.gene066406:CDS | 45.0% | |
| CAACAACAACATGGGCATCA+CGG | + | chr1.3:36298770-36298789 | MS.gene066406:CDS | 45.0% | |
| CAACCGATCTCGGGATTATT+AGG | + | chr1.3:36303165-36303184 | MS.gene066406:intron | 45.0% | |
| CAGTTACAAAACATAGGGGG+CGG | - | chr1.3:36299215-36299234 | None:intergenic | 45.0% | |
| CATGTCTGTCTTCGTGCTTA+TGG | + | chr1.3:36303929-36303948 | MS.gene066406:intron | 45.0% | |
| CCAATGTGTCTTTGTCAGTG+TGG | + | chr1.3:36303895-36303914 | MS.gene066406:intron | 45.0% | |
| CCACACTGACAAAGACACAT+TGG | - | chr1.3:36303898-36303917 | None:intergenic | 45.0% | |
| CCACCCTGCAACAAAATTTC+AGG | - | chr1.3:36302820-36302839 | None:intergenic | 45.0% | |
| CGACCTGATCTATGTCATGA+AGG | - | chr1.3:36304078-36304097 | None:intergenic | 45.0% | |
| CTAATAATCCCGAGATCGGT+TGG | - | chr1.3:36303167-36303186 | None:intergenic | 45.0% | |
| CTGACCAAATGTCCTGTTCT+TGG | - | chr1.3:36301038-36301057 | None:intergenic | 45.0% | |
| GAAGGAGGTGAATAAGGTAG+TGG | + | chr1.3:36298822-36298841 | MS.gene066406:CDS | 45.0% | |
| GAAGGGCAGGTCATAAAAAC+CGG | + | chr1.3:36302164-36302183 | MS.gene066406:CDS | 45.0% | |
| GAAGTTGCAGCAAACAATGG+TGG | + | chr1.3:36300433-36300452 | MS.gene066406:CDS | 45.0% | |
| GAGAGCTTGATATACTCCCT+TGG | - | chr1.3:36302107-36302126 | None:intergenic | 45.0% | |
| GCAGCCTACACAAAAATCAG+TGG | + | chr1.3:36300482-36300501 | MS.gene066406:CDS | 45.0% | |
| GCTTTACACCTACCTATGCT+TGG | - | chr1.3:36303777-36303796 | None:intergenic | 45.0% | |
| GGCCCAATTTCTCTTGAAAC+AGG | + | chr1.3:36303187-36303206 | MS.gene066406:intron | 45.0% | |
| GGTAGTAACCATAACCTACG+AGG | - | chr1.3:36298751-36298770 | None:intergenic | 45.0% | |
| GTTACACCGATCCAAAGATG+TGG | - | chr1.3:36302772-36302791 | None:intergenic | 45.0% | |
| GTTAGATGGAGATGAGACTC+TGG | + | chr1.3:36302876-36302895 | MS.gene066406:CDS | 45.0% | |
| GTTGCTCAGATGTGGTTAGA+TGG | + | chr1.3:36302862-36302881 | MS.gene066406:CDS | 45.0% | |
| TAACGGTCGAGCTATTCTTG+TGG | + | chr1.3:36303538-36303557 | MS.gene066406:CDS | 45.0% | |
| TATCCTCAACAGGTCAACGA+GGG | + | chr1.3:36303473-36303492 | MS.gene066406:intron | 45.0% | |
| TGAAGCATGGGGTTTGATTC+GGG | + | chr1.3:36300191-36300210 | MS.gene066406:CDS | 45.0% | |
| TGAGCCAAGAACAGGACATT+TGG | + | chr1.3:36301031-36301050 | MS.gene066406:CDS | 45.0% | |
| TGAGGATCTGTGAGGAATGA+TGG | - | chr1.3:36302144-36302163 | None:intergenic | 45.0% | |
| TGATCTATGTCATGAAGGGC+TGG | - | chr1.3:36304073-36304092 | None:intergenic | 45.0% | |
| TGTGATAATACTCGCAGGGA+CGG | + | chr1.3:36300027-36300046 | MS.gene066406:intron | 45.0% | |
| TTCCTCACAGATCCTCAGAA+GGG | + | chr1.3:36302147-36302166 | MS.gene066406:CDS | 45.0% | |
| ! | AGTGTCACTCAGCTTCATGA+TGG | + | chr1.3:36304010-36304029 | MS.gene066406:CDS | 45.0% |
| ! | CCCCCTATGTTTTGTAACTG+TGG | + | chr1.3:36299215-36299234 | MS.gene066406:intron | 45.0% |
| ! | CCTGAAATTTTGTTGCAGGG+TGG | + | chr1.3:36302817-36302836 | MS.gene066406:intron | 45.0% |
| ! | GCTGGGGCATTACATGATAA+CGG | + | chr1.3:36303521-36303540 | MS.gene066406:CDS | 45.0% |
| ! | GGTGAATAAGGTAGTGGTAG+TGG | + | chr1.3:36298828-36298847 | MS.gene066406:CDS | 45.0% |
| ! | GTCGTTTGAGGTTGAAGAGA+AGG | + | chr1.3:36298804-36298823 | MS.gene066406:CDS | 45.0% |
| ! | GTTTGAGGTTGAAGAGAAGG+AGG | + | chr1.3:36298807-36298826 | MS.gene066406:CDS | 45.0% |
| ! | TAAGGTGTCTGGGGTTTGAA+CGG | + | chr1.3:36299366-36299385 | MS.gene066406:intron | 45.0% |
| ! | TGGTAGGTTTGTTTCCTCGT+AGG | + | chr1.3:36298734-36298753 | MS.gene066406:CDS | 45.0% |
| ! | TTTTATGACCTGCCCTTCTG+AGG | - | chr1.3:36302162-36302181 | None:intergenic | 45.0% |
| !! | AGTGCCAGTGAGATTTTAGC+TGG | + | chr1.3:36303503-36303522 | MS.gene066406:CDS | 45.0% |
| !!! | CTCCAAGGCCAATTTTGACT+CGG | + | chr1.3:36299248-36299267 | MS.gene066406:intron | 45.0% |
| !!! | CTGTCGCTTTTCCTGTTTCA+CGG | + | chr1.3:36298956-36298975 | MS.gene066406:CDS | 45.0% |
| !!! | GTGCCAGTGAGATTTTAGCT+GGG | + | chr1.3:36303504-36303523 | MS.gene066406:CDS | 45.0% |
| !!! | TGCCAGTGAGATTTTAGCTG+GGG | + | chr1.3:36303505-36303524 | MS.gene066406:CDS | 45.0% |
| !!! | TGTCGCTTTTCCTGTTTCAC+GGG | + | chr1.3:36298957-36298976 | MS.gene066406:CDS | 45.0% |
| !! | AATAATACATAATATATAAA+GGG | - | chr1.3:36299394-36299413 | None:intergenic | 5.0% |
| ACGGTCGAGCTATTCTTGTG+GGG | + | chr1.3:36303540-36303559 | MS.gene066406:CDS | 50.0% | |
| ACTCTTATGGAAGACTCGCC+TGG | - | chr1.3:36303731-36303750 | None:intergenic | 50.0% | |
| AGCTCCAACACCTCAGATTG+AGG | + | chr1.3:36303794-36303813 | MS.gene066406:intron | 50.0% | |
| AGGGATTGAGAGAGAGCTGT+TGG | - | chr1.3:36298934-36298953 | None:intergenic | 50.0% | |
| CGTGATGCCCATGTTGTTGT+TGG | - | chr1.3:36298772-36298791 | None:intergenic | 50.0% | |
| CTTAACTCCCAACCGATCTC+GGG | + | chr1.3:36303156-36303175 | MS.gene066406:intron | 50.0% | |
| GCCTTGATGTTGCTCAGATG+TGG | + | chr1.3:36302854-36302873 | MS.gene066406:CDS | 50.0% | |
| GCTCCAACACCTCAGATTGA+GGG | + | chr1.3:36303795-36303814 | MS.gene066406:intron | 50.0% | |
| GCTGCATCAGCTGAGTTCAA+AGG | - | chr1.3:36300467-36300486 | None:intergenic | 50.0% | |
| GGCCCTAATAATCCCGAGAT+CGG | - | chr1.3:36303171-36303190 | None:intergenic | 50.0% | |
| GGGACGGATCCAGTTACATT+TGG | + | chr1.3:36300043-36300062 | MS.gene066406:intron | 50.0% | |
| GGTGTGTACCAAGCATAGGT+AGG | + | chr1.3:36303766-36303785 | MS.gene066406:intron | 50.0% | |
| GTATCCTCAACAGGTCAACG+AGG | + | chr1.3:36303472-36303491 | MS.gene066406:intron | 50.0% | |
| TCTTCTGCTCACCTGAGAGA+AGG | - | chr1.3:36302207-36302226 | None:intergenic | 50.0% | |
| TGCCCCAGCTAAAATCTCAC+TGG | - | chr1.3:36303510-36303529 | None:intergenic | 50.0% | |
| TTCTAGTCGGGGCTAGACTT+CGG | - | chr1.3:36303116-36303135 | None:intergenic | 50.0% | |
| ! | ATAGTGAAGGTGCAGCACAG+AGG | + | chr1.3:36301533-36301552 | MS.gene066406:CDS | 50.0% |
| ! | GACCGAGTCAAAATTGGCCT+TGG | - | chr1.3:36299253-36299272 | None:intergenic | 50.0% |
| !! | CAGGGTGGTTTGGTAAAAGC+AGG | + | chr1.3:36302832-36302851 | MS.gene066406:intron | 50.0% |
| !! | CGAGTCAAAATTGGCCTTGG+AGG | - | chr1.3:36299250-36299269 | None:intergenic | 50.0% |
| !! | GAAGAGGAAGGTGTCGTTTG+AGG | + | chr1.3:36298792-36298811 | MS.gene066406:CDS | 50.0% |
| ATGGGCATCACGGAAGAGGA+AGG | + | chr1.3:36298780-36298799 | MS.gene066406:CDS | 55.0% | |
| CAACATGGGCATCACGGAAG+AGG | + | chr1.3:36298776-36298795 | MS.gene066406:CDS | 55.0% | |
| CAGAGGCTTAGAGGGAATGC+TGG | + | chr1.3:36301550-36301569 | MS.gene066406:CDS | 55.0% | |
| CCAAACACGCCCTCAATCTG+AGG | - | chr1.3:36303807-36303826 | None:intergenic | 55.0% | |
| CTTCCCTCGTTGACCTGTTG+AGG | - | chr1.3:36303479-36303498 | None:intergenic | 55.0% | |
| GATCTGATTCTGCAGGGGAG+AGG | + | chr1.3:36301497-36301516 | MS.gene066406:intron | 55.0% | |
| GTGCAGCACAGAGGCTTAGA+GGG | + | chr1.3:36301542-36301561 | MS.gene066406:CDS | 55.0% | |
| TCACAGATCCTCAGAAGGGC+AGG | + | chr1.3:36302151-36302170 | MS.gene066406:CDS | 55.0% | |
| TCTGCAGGGGAGAGGCTTAA+TGG | + | chr1.3:36301505-36301524 | MS.gene066406:intron | 55.0% | |
| TCTGTTGTGCACTGCACGTC+TGG | - | chr1.3:36304109-36304128 | None:intergenic | 55.0% | |
| ! | ACGCCCTCAATCTGAGGTGT+TGG | - | chr1.3:36303801-36303820 | None:intergenic | 55.0% |
| ! | CCTCAGATTGAGGGCGTGTT+TGG | + | chr1.3:36303804-36303823 | MS.gene066406:intron | 55.0% |
| ! | GCTCGTGCCGGTATTCATCA+TGG | + | chr1.3:36301313-36301332 | MS.gene066406:CDS | 55.0% |
| ! | TGCCCTTCTGAGGATCTGTG+AGG | - | chr1.3:36302152-36302171 | None:intergenic | 55.0% |
| !! | TGTGGCAGTTTTGGCCTCCA+AGG | + | chr1.3:36299233-36299252 | MS.gene066406:intron | 55.0% |
| AACAGTCCAGCTGCTCGTGC+CGG | + | chr1.3:36301301-36301320 | MS.gene066406:CDS | 60.0% | |
| ACCTCAGGTGCCCGTGAAAC+AGG | - | chr1.3:36298970-36298989 | None:intergenic | 60.0% | |
| GAGAGAGACGAGCTGACCTC+AGG | - | chr1.3:36298985-36299004 | None:intergenic | 60.0% | |
| GGTGCAGCACAGAGGCTTAG+AGG | + | chr1.3:36301541-36301560 | MS.gene066406:CDS | 60.0% | |
| TCCTGTTTCACGGGCACCTG+AGG | + | chr1.3:36298966-36298985 | MS.gene066406:CDS | 60.0% | |
| TGAATACCGGCACGAGCAGC+TGG | - | chr1.3:36301310-36301329 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 36298673 | 36304258 | 36298673 | ID=MS.gene066406 |
| chr1.3 | mRNA | 36298673 | 36304258 | 36298673 | ID=MS.gene066406.t1;Parent=MS.gene066406 |
| chr1.3 | exon | 36298673 | 36298987 | 36298673 | ID=MS.gene066406.t1.exon1;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36298673 | 36298987 | 36298673 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36300165 | 36300246 | 36300165 | ID=MS.gene066406.t1.exon2;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36300165 | 36300246 | 36300165 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36300423 | 36300553 | 36300423 | ID=MS.gene066406.t1.exon3;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36300423 | 36300553 | 36300423 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36300966 | 36301052 | 36300966 | ID=MS.gene066406.t1.exon4;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36300966 | 36301052 | 36300966 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36301280 | 36301358 | 36301280 | ID=MS.gene066406.t1.exon5;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36301280 | 36301358 | 36301280 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36301512 | 36301591 | 36301512 | ID=MS.gene066406.t1.exon6;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36301512 | 36301591 | 36301512 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36301921 | 36301956 | 36301921 | ID=MS.gene066406.t1.exon7;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36301921 | 36301956 | 36301921 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36302095 | 36302214 | 36302095 | ID=MS.gene066406.t1.exon8;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36302095 | 36302214 | 36302095 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36302648 | 36302734 | 36302648 | ID=MS.gene066406.t1.exon9;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36302648 | 36302734 | 36302648 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36302835 | 36302984 | 36302835 | ID=MS.gene066406.t1.exon10;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36302835 | 36302984 | 36302835 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36303485 | 36303592 | 36303485 | ID=MS.gene066406.t1.exon11;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36303485 | 36303592 | 36303485 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| chr1.3 | exon | 36304010 | 36304258 | 36304010 | ID=MS.gene066406.t1.exon12;Parent=MS.gene066406.t1 |
| chr1.3 | CDS | 36304010 | 36304258 | 36304010 | ID=cds.MS.gene066406.t1;Parent=MS.gene066406.t1 |
| Gene Sequence |
| Protein sequence |
