Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064830.t1 | XP_013462263.1 | 98 | 205 | 4 | 0 | 88 | 292 | 129 | 333 | 1.90E-104 | 389 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064830.t1 | A0A072V4M6 | 98.0 | 205 | 4 | 0 | 88 | 292 | 129 | 333 | 1.4e-104 | 389.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene064830 | 0.830622 | 2.65E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene064830 | 0.827234 | 1.75E-54 | -1.69E-46 |
| MS.gene049173 | MS.gene064830 | 0.810462 | 1.14E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene064830 | 0.834313 | 3.22E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene064830 | 0.858839 | 6.25E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene064830 | 0.805272 | 1.45E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene064830 | 0.834198 | 3.44E-56 | -1.69E-46 |
| MS.gene049369 | MS.gene064830 | 0.832482 | 9.22E-56 | -1.69E-46 |
| MS.gene049396 | MS.gene064830 | 0.809049 | 2.29E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene064830 | 0.811759 | 5.96E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene064830 | 0.886358 | 3.67E-72 | -1.69E-46 |
| MS.gene049633 | MS.gene064830 | 0.832021 | 1.20E-55 | -1.69E-46 |
| MS.gene049794 | MS.gene064830 | 0.855906 | 4.61E-62 | -1.69E-46 |
| MS.gene049805 | MS.gene064830 | 0.824833 | 6.51E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene064830 | 0.808906 | 2.46E-50 | -1.69E-46 |
| MS.gene050499 | MS.gene064830 | 0.8245 | 7.80E-54 | -1.69E-46 |
| MS.gene050520 | MS.gene064830 | 0.811811 | 5.81E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene064830 | 0.859267 | 4.66E-63 | -1.69E-46 |
| MS.gene050593 | MS.gene064830 | 0.855646 | 5.49E-62 | -1.69E-46 |
| MS.gene050625 | MS.gene064830 | 0.834929 | 2.26E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene064830 | 0.8452 | 4.71E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene064830 | 0.809326 | 2.00E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene064830 | 0.882761 | 7.94E-71 | -1.69E-46 |
| MS.gene050772 | MS.gene064830 | 0.867853 | 1.01E-65 | -1.69E-46 |
| MS.gene05080 | MS.gene064830 | 0.84896 | 4.39E-60 | -1.69E-46 |
| MS.gene05081 | MS.gene064830 | 0.843049 | 1.78E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene064830 | 0.820486 | 6.69E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene064830 | 0.820493 | 6.66E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene064830 | 0.875441 | 3.07E-68 | -1.69E-46 |
| MS.gene05105 | MS.gene064830 | 0.874211 | 8.06E-68 | -1.69E-46 |
| MS.gene051255 | MS.gene064830 | 0.820296 | 7.39E-53 | -1.69E-46 |
| MS.gene051360 | MS.gene064830 | 0.86222 | 5.91E-64 | -1.69E-46 |
| MS.gene051387 | MS.gene064830 | 0.85819 | 9.76E-63 | -1.69E-46 |
| MS.gene051525 | MS.gene064830 | 0.836467 | 9.20E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene064830 | 0.8534 | 2.45E-61 | -1.69E-46 |
| MS.gene051692 | MS.gene064830 | 0.8101 | 1.36E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene064830 | 0.847243 | 1.31E-59 | -1.69E-46 |
| MS.gene051734 | MS.gene064830 | 0.847044 | 1.48E-59 | -1.69E-46 |
| MS.gene051838 | MS.gene064830 | 0.876205 | 1.68E-68 | -1.69E-46 |
| MS.gene051858 | MS.gene064830 | 0.870023 | 2.00E-66 | -1.69E-46 |
| MS.gene051874 | MS.gene064830 | 0.815496 | 8.97E-52 | -1.69E-46 |
| MS.gene052134 | MS.gene064830 | 0.807415 | 5.11E-50 | -1.69E-46 |
| MS.gene052135 | MS.gene064830 | 0.800861 | 1.18E-48 | -1.69E-46 |
| MS.gene052136 | MS.gene064830 | 0.825957 | 3.53E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene064830 | 0.838798 | 2.32E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene064830 | 0.81199 | 5.31E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene064830 | 0.825053 | 5.78E-54 | -1.69E-46 |
| MS.gene052346 | MS.gene064830 | 0.867882 | 9.86E-66 | -1.69E-46 |
| MS.gene052414 | MS.gene064830 | 0.868558 | 5.97E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene064830 | 0.825421 | 4.73E-54 | -1.69E-46 |
| MS.gene052481 | MS.gene064830 | 0.856334 | 3.45E-62 | -1.69E-46 |
| MS.gene052484 | MS.gene064830 | 0.852787 | 3.67E-61 | -1.69E-46 |
| MS.gene052485 | MS.gene064830 | 0.829476 | 5.04E-55 | -1.69E-46 |
| MS.gene052501 | MS.gene064830 | 0.855259 | 7.11E-62 | -1.69E-46 |
| MS.gene052503 | MS.gene064830 | 0.839962 | 1.16E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene064830 | 0.847351 | 1.22E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene064830 | 0.841305 | 5.15E-58 | -1.69E-46 |
| MS.gene052823 | MS.gene064830 | 0.830098 | 3.56E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene064830 | 0.834765 | 2.48E-56 | -1.69E-46 |
| MS.gene052870 | MS.gene064830 | 0.828969 | 6.69E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene064830 | 0.831479 | 1.63E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene064830 | 0.859414 | 4.20E-63 | -1.69E-46 |
| MS.gene052982 | MS.gene064830 | 0.873809 | 1.10E-67 | -1.69E-46 |
| MS.gene052999 | MS.gene064830 | 0.820591 | 6.33E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene064830 | 0.802466 | 5.54E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene064830 | 0.816779 | 4.64E-52 | -1.69E-46 |
| MS.gene053107 | MS.gene064830 | 0.813954 | 1.97E-51 | -1.69E-46 |
| MS.gene053169 | MS.gene064830 | 0.805444 | 1.33E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene064830 | 0.832526 | 8.99E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene064830 | 0.864533 | 1.14E-64 | -1.69E-46 |
| MS.gene053209 | MS.gene064830 | 0.818605 | 1.80E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene064830 | 0.834171 | 3.50E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene064830 | 0.826165 | 3.15E-54 | -1.69E-46 |
| MS.gene053318 | MS.gene064830 | 0.844495 | 7.30E-59 | -1.69E-46 |
| MS.gene053436 | MS.gene064830 | 0.82938 | 5.32E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene064830 | 0.830195 | 3.37E-55 | -1.69E-46 |
| MS.gene053479 | MS.gene064830 | 0.813464 | 2.53E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene064830 | 0.867686 | 1.14E-65 | -1.69E-46 |
| MS.gene053626 | MS.gene064830 | 0.834577 | 2.77E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene064830 | 0.832609 | 8.57E-56 | -1.69E-46 |
| MS.gene053758 | MS.gene064830 | 0.806477 | 8.07E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene064830 | 0.85666 | 2.77E-62 | -1.69E-46 |
| MS.gene053912 | MS.gene064830 | 0.832013 | 1.20E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene064830 | 0.83535 | 1.77E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene064830 | 0.814217 | 1.72E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene064830 | 0.860164 | 2.50E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene064830 | 0.803516 | 3.36E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene064830 | 0.883912 | 3.00E-71 | -1.69E-46 |
| MS.gene05494 | MS.gene064830 | 0.85711 | 2.04E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene064830 | 0.842688 | 2.22E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene064830 | 0.814041 | 1.89E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene064830 | 0.849602 | 2.91E-60 | -1.69E-46 |
| MS.gene055224 | MS.gene064830 | 0.828573 | 8.34E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene064830 | 0.844116 | 9.22E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene064830 | 0.810369 | 1.19E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene064830 | 0.80544 | 1.33E-49 | -1.69E-46 |
| MS.gene055486 | MS.gene064830 | 0.807724 | 4.40E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene064830 | 0.818519 | 1.88E-52 | -1.69E-46 |
| MS.gene055539 | MS.gene064830 | 0.828415 | 9.10E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene064830 | 0.864699 | 1.01E-64 | -1.69E-46 |
| MS.gene055722 | MS.gene064830 | 0.881876 | 1.67E-70 | -1.69E-46 |
| MS.gene055741 | MS.gene064830 | 0.856722 | 2.66E-62 | -1.69E-46 |
| MS.gene055744 | MS.gene064830 | 0.854699 | 1.03E-61 | -1.69E-46 |
| MS.gene055893 | MS.gene064830 | 0.816036 | 6.80E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene064830 | 0.822187 | 2.71E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene064830 | 0.837384 | 5.37E-57 | -1.69E-46 |
| MS.gene055911 | MS.gene064830 | 0.837148 | 6.17E-57 | -1.69E-46 |
| MS.gene055941 | MS.gene064830 | 0.862725 | 4.13E-64 | -1.69E-46 |
| MS.gene056040 | MS.gene064830 | 0.812375 | 4.38E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene064830 | 0.814821 | 1.27E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene064830 | 0.877877 | 4.42E-69 | -1.69E-46 |
| MS.gene056409 | MS.gene064830 | 0.815173 | 1.06E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene064830 | 0.808529 | 2.96E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene064830 | 0.81133 | 7.39E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene064830 | 0.824101 | 9.68E-54 | -1.69E-46 |
| MS.gene056449 | MS.gene064830 | 0.814829 | 1.26E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene064830 | 0.804974 | 1.67E-49 | -1.69E-46 |
| MS.gene056510 | MS.gene064830 | 0.805603 | 1.23E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene064830 | 0.845411 | 4.13E-59 | -1.69E-46 |
| MS.gene056610 | MS.gene064830 | 0.815167 | 1.06E-51 | -1.69E-46 |
| MS.gene05664 | MS.gene064830 | 0.817418 | 3.33E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene064830 | 0.833339 | 5.65E-56 | -1.69E-46 |
| MS.gene056796 | MS.gene064830 | 0.82355 | 1.30E-53 | -1.69E-46 |
| MS.gene056877 | MS.gene064830 | 0.838577 | 2.65E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene064830 | 0.804387 | 2.21E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene064830 | 0.839856 | 1.23E-57 | -1.69E-46 |
| MS.gene057048 | MS.gene064830 | 0.810888 | 9.21E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene064830 | 0.856457 | 3.18E-62 | -1.69E-46 |
| MS.gene057124 | MS.gene064830 | 0.823239 | 1.54E-53 | -1.69E-46 |
| MS.gene057146 | MS.gene064830 | 0.826105 | 3.26E-54 | -1.69E-46 |
| MS.gene057289 | MS.gene064830 | 0.847899 | 8.63E-60 | -1.69E-46 |
| MS.gene057331 | MS.gene064830 | 0.83903 | 2.02E-57 | -1.69E-46 |
| MS.gene057332 | MS.gene064830 | 0.805953 | 1.04E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene064830 | 0.832762 | 7.86E-56 | -1.69E-46 |
| MS.gene057658 | MS.gene064830 | 0.837929 | 3.89E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene064830 | 0.851826 | 6.89E-61 | -1.69E-46 |
| MS.gene057749 | MS.gene064830 | 0.824549 | 7.60E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene064830 | 0.832668 | 8.29E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene064830 | 0.836083 | 1.15E-56 | -1.69E-46 |
| MS.gene057856 | MS.gene064830 | 0.833778 | 4.39E-56 | -1.69E-46 |
| MS.gene057857 | MS.gene064830 | 0.80748 | 4.95E-50 | -1.69E-46 |
| MS.gene058007 | MS.gene064830 | 0.82643 | 2.73E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene064830 | 0.825929 | 3.58E-54 | -1.69E-46 |
| MS.gene058120 | MS.gene064830 | 0.871199 | 8.20E-67 | -1.69E-46 |
| MS.gene058130 | MS.gene064830 | 0.851779 | 7.11E-61 | -1.69E-46 |
| MS.gene058338 | MS.gene064830 | 0.843314 | 1.51E-58 | -1.69E-46 |
| MS.gene058376 | MS.gene064830 | 0.846695 | 1.85E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene064830 | 0.861181 | 1.23E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene064830 | 0.812289 | 4.57E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene064830 | 0.862538 | 4.72E-64 | -1.69E-46 |
| MS.gene058544 | MS.gene064830 | 0.809004 | 2.34E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene064830 | 0.868275 | 7.37E-66 | -1.69E-46 |
| MS.gene058773 | MS.gene064830 | 0.829864 | 4.06E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene064830 | 0.850897 | 1.26E-60 | -1.69E-46 |
| MS.gene05883 | MS.gene064830 | 0.82856 | 8.40E-55 | -1.69E-46 |
| MS.gene058948 | MS.gene064830 | 0.885151 | 1.04E-71 | -1.69E-46 |
| MS.gene059023 | MS.gene064830 | 0.864256 | 1.39E-64 | -1.69E-46 |
| MS.gene05913 | MS.gene064830 | 0.825815 | 3.81E-54 | -1.69E-46 |
| MS.gene059303 | MS.gene064830 | 0.801156 | 1.03E-48 | -1.69E-46 |
| MS.gene05934 | MS.gene064830 | 0.841813 | 3.79E-58 | -1.69E-46 |
| MS.gene059366 | MS.gene064830 | 0.807951 | 3.93E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene064830 | 0.812478 | 4.16E-51 | -1.69E-46 |
| MS.gene059368 | MS.gene064830 | 0.81667 | 4.91E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene064830 | 0.810856 | 9.36E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene064830 | 0.826446 | 2.70E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene064830 | 0.834623 | 2.69E-56 | -1.69E-46 |
| MS.gene059667 | MS.gene064830 | 0.819267 | 1.27E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene064830 | 0.802216 | 6.23E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene064830 | 0.802212 | 6.24E-49 | -1.69E-46 |
| MS.gene059680 | MS.gene064830 | 0.811999 | 5.29E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene064830 | 0.838845 | 2.26E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene064830 | 0.822046 | 2.92E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene064830 | 0.826707 | 2.34E-54 | -1.69E-46 |
| MS.gene059711 | MS.gene064830 | 0.817326 | 3.49E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene064830 | 0.857968 | 1.14E-62 | -1.69E-46 |
| MS.gene059801 | MS.gene064830 | 0.840656 | 7.62E-58 | -1.69E-46 |
| MS.gene05986 | MS.gene064830 | 0.81155 | 6.62E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene064830 | 0.865918 | 4.17E-65 | -1.69E-46 |
| MS.gene060372 | MS.gene064830 | 0.818631 | 1.77E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene064830 | 0.826385 | 2.79E-54 | -1.69E-46 |
| MS.gene060482 | MS.gene064830 | 0.828854 | 7.13E-55 | -1.69E-46 |
| MS.gene060485 | MS.gene064830 | 0.806081 | 9.78E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene064830 | 0.842631 | 2.30E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene064830 | 0.812428 | 4.26E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene064830 | 0.831218 | 1.89E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene064830 | 0.816331 | 5.84E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene064830 | 0.851067 | 1.13E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene064830 | 0.897041 | 2.07E-76 | -1.69E-46 |
| MS.gene06092 | MS.gene064830 | 0.861068 | 1.33E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene064830 | 0.803559 | 3.29E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene064830 | 0.800068 | 1.71E-48 | -1.69E-46 |
| MS.gene061150 | MS.gene064830 | 0.819762 | 9.80E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene064830 | 0.828353 | 9.42E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene064830 | 0.800916 | 1.15E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064830.t1 | MTR_3g115240 | 96.209 | 211 | 6 | 1 | 82 | 292 | 125 | 333 | 7.36e-146 | 413 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064830.t1 | AT1G63610 | 81.863 | 204 | 36 | 1 | 88 | 290 | 135 | 338 | 5.18e-110 | 322 |
| MS.gene064830.t1 | AT1G63610 | 81.148 | 122 | 22 | 1 | 88 | 208 | 135 | 256 | 6.48e-56 | 181 |
| MS.gene064830.t1 | AT1G63610 | 79.167 | 48 | 10 | 0 | 88 | 135 | 135 | 182 | 1.49e-18 | 82.0 |
| MS.gene064830.t1 | AT2G14910 | 25.207 | 242 | 124 | 6 | 94 | 278 | 133 | 374 | 9.21e-12 | 65.5 |
| MS.gene064830.t1 | AT5G14970 | 23.874 | 222 | 128 | 5 | 96 | 278 | 134 | 353 | 3.10e-11 | 63.5 |
Find 60 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCGTGCAGCCGGAATTTA+TGG | 0.149781 | 3.4:+98620646 | MS.gene064830:CDS |
| AACTTGGAAAACTGCTTTAT+TGG | 0.187386 | 3.4:+98623431 | MS.gene064830:CDS |
| CAGAGTGCCGTTAGGGGATT+TGG | 0.219495 | 3.4:-98620348 | None:intergenic |
| TCCGAGGCTCAAGAGATTTC+AGG | 0.291456 | 3.4:-98622196 | None:intergenic |
| GGCAATTCAGCCAGCTTTGC+AGG | 0.291964 | 3.4:-98623523 | None:intergenic |
| TCCGGACGTGCAAGATAAAA+AGG | 0.320165 | 3.4:+98621668 | MS.gene064830:CDS |
| TTTGGAACTGCAAGAAAGTT+TGG | 0.323667 | 3.4:+98621632 | MS.gene064830:CDS |
| ATTAGGTGGAACAACATTTC+TGG | 0.347794 | 3.4:+98622059 | MS.gene064830:CDS |
| GGGACACAAAAGAATGTTTC+AGG | 0.353665 | 3.4:+98622029 | MS.gene064830:CDS |
| ATGTTTCAGGTGAAGTCATT+AGG | 0.366658 | 3.4:+98622042 | MS.gene064830:CDS |
| ACAAACAATTCCATAAATTC+CGG | 0.373472 | 3.4:-98620656 | None:intergenic |
| TGTGTCCCAGGTGCATAGTC+TGG | 0.375806 | 3.4:-98622014 | None:intergenic |
| GAGCAGAAGAGAAATCTTAC+TGG | 0.381488 | 3.4:+98620613 | MS.gene064830:CDS |
| TTTGGAACAAGTTGCCCTTC+CGG | 0.390092 | 3.4:+98621650 | MS.gene064830:CDS |
| AAAACTGCTTTATTGGTTGA+TGG | 0.399137 | 3.4:+98623438 | MS.gene064830:CDS |
| CTTTATTGGTTGATGGTGGT+TGG | 0.401910 | 3.4:+98623445 | MS.gene064830:CDS |
| TAGAAATGCACAATACCGTT+TGG | 0.412122 | 3.4:+98621614 | MS.gene064830:CDS |
| GACTAACCGCAGAGAAAGTT+GGG | 0.444012 | 3.4:-98621046 | None:intergenic |
| GAGACTAGTGCATCCGAACT+TGG | 0.446534 | 3.4:+98623415 | MS.gene064830:CDS |
| TTTATTGGTTGATGGTGGTT+GGG | 0.446688 | 3.4:+98623446 | MS.gene064830:CDS |
| TCTTGAGCCTCGGAATTTGA+AGG | 0.450089 | 3.4:+98622205 | MS.gene064830:CDS |
| CATTTCTGGACCTGAGAGAA+TGG | 0.452153 | 3.4:+98622073 | MS.gene064830:CDS |
| ACTTGGAACTCCTGCAAAGC+TGG | 0.466951 | 3.4:+98623513 | MS.gene064830:CDS |
| CATAAGCTGTGCAAGGTTCT+CGG | 0.467098 | 3.4:-98621562 | None:intergenic |
| AAAAGTACCAGAGTGCCGTT+AGG | 0.471684 | 3.4:-98620356 | None:intergenic |
| CAATGCACAAAATGAACTGT+TGG | 0.481591 | 3.4:+98622169 | MS.gene064830:CDS |
| AGACTAACCGCAGAGAAAGT+TGG | 0.484814 | 3.4:-98621047 | None:intergenic |
| AACTTTCTTGCAGTTCCAAA+CGG | 0.487921 | 3.4:-98621629 | None:intergenic |
| TGCAGATCCTACTCAAATGA+AGG | 0.495494 | 3.4:+98622685 | MS.gene064830:CDS |
| CAGACGGTGACAAATATGAT+TGG | 0.500013 | 3.4:+98620842 | MS.gene064830:CDS |
| AAGCTGGCTGAATTGCCGCC+AGG | 0.504319 | 3.4:+98623529 | MS.gene064830:CDS |
| TAGGATTTAACTAGTAGTGC+TGG | 0.507226 | 3.4:+98622611 | MS.gene064830:intron |
| TACATTTATAAAGCGCCTAC+TGG | 0.507895 | 3.4:+98622658 | MS.gene064830:CDS |
| AAAGTACCAGAGTGCCGTTA+GGG | 0.507908 | 3.4:-98620355 | None:intergenic |
| GGTTATGATAGCTAATCTCT+TGG | 0.509354 | 3.4:+98620989 | MS.gene064830:CDS |
| ACCTGAAATCTCTTGAGCCT+CGG | 0.512343 | 3.4:+98622195 | MS.gene064830:CDS |
| CATTGAAGTTCGTTATGACA+TGG | 0.518591 | 3.4:+98623483 | MS.gene064830:CDS |
| TATGACATGGAAAGAGTACT+TGG | 0.520400 | 3.4:+98623496 | MS.gene064830:CDS |
| GATAGGCAGTTTCTACATGC+TGG | 0.521820 | 3.4:+98620968 | MS.gene064830:intron |
| CAAATCCCCTAACGGCACTC+TGG | 0.539235 | 3.4:+98620349 | MS.gene064830:CDS |
| GATATTCCAGACTATGCACC+TGG | 0.544069 | 3.4:+98622008 | MS.gene064830:CDS |
| ATGTACAGTGTCATGATGAC+TGG | 0.544482 | 3.4:+98621582 | MS.gene064830:CDS |
| GTATGTCAAGACCGTGCAGC+CGG | 0.545800 | 3.4:+98620637 | MS.gene064830:CDS |
| GAGGAGTTAAATCGTCAAGT+TGG | 0.554733 | 3.4:+98622134 | MS.gene064830:CDS |
| TTCCATAAATTCCGGCTGCA+CGG | 0.558125 | 3.4:-98620648 | None:intergenic |
| AGGCAAACCTTCATTTGAGT+AGG | 0.567766 | 3.4:-98622692 | None:intergenic |
| TTTAACTAGTAGTGCTGGAG+AGG | 0.582109 | 3.4:+98622616 | MS.gene064830:CDS |
| GTACATTGAAATACTTGAAG+CGG | 0.584560 | 3.4:+98622106 | MS.gene064830:CDS |
| TTTATCTTGCACGTCCGGAA+GGG | 0.586926 | 3.4:-98621664 | None:intergenic |
| CACTGTACATAAGCTGTGCA+AGG | 0.614814 | 3.4:-98621569 | None:intergenic |
| TTTCAGGTGAAGTCATTAGG+TGG | 0.620061 | 3.4:+98622045 | MS.gene064830:CDS |
| AAATCAACCTTCAAATTCCG+AGG | 0.621737 | 3.4:-98622212 | None:intergenic |
| ACTGCTTTATTGGTTGATGG+TGG | 0.623526 | 3.4:+98623441 | MS.gene064830:CDS |
| AATACTTGAAGCGGAGATCG+AGG | 0.627103 | 3.4:+98622115 | MS.gene064830:CDS |
| TAGGATCTGCAACAGCCAGT+AGG | 0.630746 | 3.4:-98622673 | None:intergenic |
| GGTGAATCCAAATCCCCTAA+CGG | 0.646624 | 3.4:+98620341 | MS.gene064830:CDS |
| TTATTTCCCAACTTTCTCTG+CGG | 0.646854 | 3.4:+98621040 | MS.gene064830:CDS |
| AAGTACCAGAGTGCCGTTAG+GGG | 0.671487 | 3.4:-98620354 | None:intergenic |
| TGTGGATGCTATGAGACAGA+CGG | 0.739945 | 3.4:+98620826 | MS.gene064830:CDS |
| ATATTCCAGACTATGCACCT+GGG | 0.741358 | 3.4:+98622009 | MS.gene064830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATCTTACAATATTGT+AGG | + | chr3.4:98621986-98622005 | MS.gene064830:intron | 15.0% |
| !! | ATCATTAAATCATAAAACAA+CGG | - | chr3.4:98620951-98620970 | None:intergenic | 15.0% |
| !! | ATTGTTATAGAAAAAAATTG+AGG | - | chr3.4:98620878-98620897 | None:intergenic | 15.0% |
| !! | ATTTCTTTCTGTTATTAATT+AGG | + | chr3.4:98620802-98620821 | MS.gene064830:intron | 15.0% |
| !! | GATGTTTGTATTTATTATTT+AGG | - | chr3.4:98621347-98621366 | None:intergenic | 15.0% |
| !! | TTGTTATAGAAAAAAATTGA+GGG | - | chr3.4:98620877-98620896 | None:intergenic | 15.0% |
| !!! | ATTTCTTCAAATTGATTTAT+GGG | + | chr3.4:98623268-98623287 | MS.gene064830:intron | 15.0% |
| !!! | TTAATTTTCTCCTTAAATTA+AGG | + | chr3.4:98623031-98623050 | MS.gene064830:intron | 15.0% |
| !!! | TTGTTTTATGATTTAATGAT+AGG | + | chr3.4:98620951-98620970 | MS.gene064830:intron | 15.0% |
| !! | AATGTTAACCCAAATAATAA+TGG | - | chr3.4:98622831-98622850 | None:intergenic | 20.0% |
| !! | AATTTAAGAACATTGTTTGT+TGG | + | chr3.4:98622546-98622565 | MS.gene064830:intron | 20.0% |
| !! | ACCTGAATAAAAAAACAAAA+TGG | - | chr3.4:98621540-98621559 | None:intergenic | 20.0% |
| !! | AGTCTATAAAAAATCAGAAT+TGG | - | chr3.4:98623386-98623405 | None:intergenic | 20.0% |
| !! | GTTAACATTGAATTTAATGT+TGG | + | chr3.4:98622842-98622861 | MS.gene064830:intron | 20.0% |
| !! | TAAGATAGGAAACTAAATAT+TGG | + | chr3.4:98623119-98623138 | MS.gene064830:intron | 20.0% |
| !! | TCATATCATATCATGTAAAT+AGG | - | chr3.4:98621305-98621324 | None:intergenic | 20.0% |
| !! | TGTTATAGAAAAAAATTGAG+GGG | - | chr3.4:98620876-98620895 | None:intergenic | 20.0% |
| !! | TTGTTACAATGGAAAATAAA+AGG | + | chr3.4:98623060-98623079 | MS.gene064830:intron | 20.0% |
| !!! | ACAATTTTCTCCTTAATTTA+AGG | - | chr3.4:98623044-98623063 | None:intergenic | 20.0% |
| !!! | ACCATTTTGTTTTTTTATTC+AGG | + | chr3.4:98621536-98621555 | MS.gene064830:intron | 20.0% |
| !!! | CTTTTTTATTAAATGAGGAA+AGG | - | chr3.4:98623202-98623221 | None:intergenic | 20.0% |
| !!! | GATTTCTTCAAATTGATTTA+TGG | + | chr3.4:98623267-98623286 | MS.gene064830:intron | 20.0% |
| !!! | GTTGGAATTGTATTATTTTT+AGG | + | chr3.4:98622860-98622879 | MS.gene064830:intron | 20.0% |
| !!! | TGTGATCAATTTTGAAAATA+CGG | + | chr3.4:98622341-98622360 | MS.gene064830:intron | 20.0% |
| ! | AAAGGCTATTGAAAAACAAT+AGG | + | chr3.4:98622950-98622969 | MS.gene064830:intron | 25.0% |
| ! | AATGAACTTATATCAGTTCT+TGG | - | chr3.4:98621282-98621301 | None:intergenic | 25.0% |
| ! | AATTGCAACTGTAAGATTAT+CGG | + | chr3.4:98620895-98620914 | MS.gene064830:intron | 25.0% |
| ! | AATTTGAAGAAATCTAGTTG+TGG | - | chr3.4:98623261-98623280 | None:intergenic | 25.0% |
| ! | ACAAACAATTCCATAAATTC+CGG | - | chr3.4:98620659-98620678 | None:intergenic | 25.0% |
| ! | ACATAAAACTCTTCATTCTT+AGG | - | chr3.4:98621847-98621866 | None:intergenic | 25.0% |
| ! | GAGATGTAATTCTAGATATT+TGG | - | chr3.4:98622424-98622443 | None:intergenic | 25.0% |
| ! | GTTAAATCCTACATGAAAAA+AGG | - | chr3.4:98622602-98622621 | None:intergenic | 25.0% |
| ! | GTTATAGAAAAAAATTGAGG+GGG | - | chr3.4:98620875-98620894 | None:intergenic | 25.0% |
| ! | TAAGGAGAAAATTGTTACAA+TGG | + | chr3.4:98623049-98623068 | MS.gene064830:intron | 25.0% |
| ! | TAATAGTCTAACTGACTATA+GGG | + | chr3.4:98623227-98623246 | MS.gene064830:intron | 25.0% |
| ! | TCTGTTCACCATTATTATTT+GGG | + | chr3.4:98622820-98622839 | MS.gene064830:intron | 25.0% |
| !! | AAAATTAAACAAGTACCGTA+CGG | - | chr3.4:98621102-98621121 | None:intergenic | 25.0% |
| !! | AGAGAAAGTATAAAGCAAAA+AGG | - | chr3.4:98621493-98621512 | None:intergenic | 25.0% |
| !! | ATTGGAATATTTTCCAATAG+AGG | + | chr3.4:98623137-98623156 | MS.gene064830:intron | 25.0% |
| !! | TATTTAGGATTGCTGTATAT+GGG | - | chr3.4:98621332-98621351 | None:intergenic | 25.0% |
| !! | TGTGTTTTATGTGTTTATCA+TGG | + | chr3.4:98622888-98622907 | MS.gene064830:intron | 25.0% |
| !! | TTATTTAGGATTGCTGTATA+TGG | - | chr3.4:98621333-98621352 | None:intergenic | 25.0% |
| !! | TTCCTATCTTATTGTTTTCT+AGG | - | chr3.4:98623110-98623129 | None:intergenic | 25.0% |
| !! | TTCTGTTATTAATTAGGTTG+TGG | + | chr3.4:98620808-98620827 | MS.gene064830:intron | 25.0% |
| !!! | AGTTTTATGTCTTGTGAATT+TGG | + | chr3.4:98621857-98621876 | MS.gene064830:intron | 25.0% |
| !!! | CAGTGCTTTTTTATTAAATG+AGG | - | chr3.4:98623207-98623226 | None:intergenic | 25.0% |
| !!! | GTGATCAATTTTGAAAATAC+GGG | + | chr3.4:98622342-98622361 | MS.gene064830:intron | 25.0% |
| AAAAACTAGTTGAAGAGAGA+GGG | - | chr3.4:98620927-98620946 | None:intergenic | 30.0% | |
| AACTTGGAAAACTGCTTTAT+TGG | + | chr3.4:98623431-98623450 | MS.gene064830:CDS | 30.0% | |
| AAGTATTTGGATAACTCCTA+GGG | + | chr3.4:98621744-98621763 | MS.gene064830:intron | 30.0% | |
| AATCCTACATGAAAAAAGGA+AGG | - | chr3.4:98622598-98622617 | None:intergenic | 30.0% | |
| AATGATACTACTGACAGTAA+TGG | - | chr3.4:98623341-98623360 | None:intergenic | 30.0% | |
| ACGATAAAACTGTACCAAAA+AGG | + | chr3.4:98621159-98621178 | MS.gene064830:intron | 30.0% | |
| ACTATGTGTGATTGTTTGAT+CGG | + | chr3.4:98623291-98623310 | MS.gene064830:intron | 30.0% | |
| AGAAATCACATTCACTAAGA+TGG | - | chr3.4:98620788-98620807 | None:intergenic | 30.0% | |
| CTCTGTTCACCATTATTATT+TGG | + | chr3.4:98622819-98622838 | MS.gene064830:intron | 30.0% | |
| GTAATAGTCTAACTGACTAT+AGG | + | chr3.4:98623226-98623245 | MS.gene064830:intron | 30.0% | |
| GTACATTGAAATACTTGAAG+CGG | + | chr3.4:98622106-98622125 | MS.gene064830:CDS | 30.0% | |
| TAAAAACTAGTTGAAGAGAG+AGG | - | chr3.4:98620928-98620947 | None:intergenic | 30.0% | |
| TAATGAAGTCTCCTTAAGAA+CGG | - | chr3.4:98622755-98622774 | None:intergenic | 30.0% | |
| TGAAAAAAGGAAGGTTACTA+TGG | - | chr3.4:98622589-98622608 | None:intergenic | 30.0% | |
| TGCCTAGAAAACAATAAGAT+AGG | + | chr3.4:98623105-98623124 | MS.gene064830:intron | 30.0% | |
| ! | AAAACTGCTTTATTGGTTGA+TGG | + | chr3.4:98623438-98623457 | MS.gene064830:CDS | 30.0% |
| ! | AAATTAAACAAGTACCGTAC+GGG | - | chr3.4:98621101-98621120 | None:intergenic | 30.0% |
| ! | ATAAAGCAGTTTTCCAAGTT+CGG | - | chr3.4:98623431-98623450 | None:intergenic | 30.0% |
| ! | ATTTCTCTTCCTTGTCTTTT+TGG | + | chr3.4:98621697-98621716 | MS.gene064830:intron | 30.0% |
| ! | GTTCTTAAATTTTAAGCGCA+GGG | - | chr3.4:98622537-98622556 | None:intergenic | 30.0% |
| ! | GTTTTATGTGTTTATCATGG+AGG | + | chr3.4:98622891-98622910 | MS.gene064830:intron | 30.0% |
| ! | TCAGACGTTATTGAAGTATT+TGG | + | chr3.4:98621731-98621750 | MS.gene064830:intron | 30.0% |
| ! | TGTTCTTAAATTTTAAGCGC+AGG | - | chr3.4:98622538-98622557 | None:intergenic | 30.0% |
| ! | TTGTTGGGTATATTAGTTTC+AGG | + | chr3.4:98621821-98621840 | MS.gene064830:intron | 30.0% |
| ! | TTTCTCTTCCTTGTCTTTTT+GGG | + | chr3.4:98621698-98621717 | MS.gene064830:intron | 30.0% |
| !! | CATAATGTTGCTTTAGCAAT+TGG | - | chr3.4:98621441-98621460 | None:intergenic | 30.0% |
| !!! | TAACCTTCCTTTTTTCATGT+AGG | + | chr3.4:98622592-98622611 | MS.gene064830:intron | 30.0% |
| !!! | TGTAATGACTTTTTTGCTTG+TGG | + | chr3.4:98621387-98621406 | MS.gene064830:intron | 30.0% |
| AAAACCTCATTGCTGCTAAA+TGG | + | chr3.4:98621886-98621905 | MS.gene064830:intron | 35.0% | |
| AAACTGTACCAAAAAGGATG+CGG | + | chr3.4:98621165-98621184 | MS.gene064830:intron | 35.0% | |
| AAATCAACCTTCAAATTCCG+AGG | - | chr3.4:98622215-98622234 | None:intergenic | 35.0% | |
| AACACCATATTAAACCTACC+TGG | - | chr3.4:98622456-98622475 | None:intergenic | 35.0% | |
| AACGTAATTCCCATGGAATA+GGG | + | chr3.4:98620451-98620470 | MS.gene064830:intron | 35.0% | |
| AACTTTCTTGCAGTTCCAAA+CGG | - | chr3.4:98621632-98621651 | None:intergenic | 35.0% | |
| AATAGGGCAAGTGTAGAATA+GGG | + | chr3.4:98620467-98620486 | MS.gene064830:intron | 35.0% | |
| AATCGATCAACTAACAGTGT+CGG | - | chr3.4:98620724-98620743 | None:intergenic | 35.0% | |
| AATGAAGTCTCCTTAAGAAC+GGG | - | chr3.4:98622754-98622773 | None:intergenic | 35.0% | |
| ATAACAAGACAACACGTTAC+CGG | - | chr3.4:98620698-98620717 | None:intergenic | 35.0% | |
| ATTAGGTGGAACAACATTTC+TGG | + | chr3.4:98622059-98622078 | MS.gene064830:CDS | 35.0% | |
| CAATGCACAAAATGAACTGT+TGG | + | chr3.4:98622169-98622188 | MS.gene064830:CDS | 35.0% | |
| CACATAATCCCAAAAAGACA+AGG | - | chr3.4:98621709-98621728 | None:intergenic | 35.0% | |
| CATTGAAGTTCGTTATGACA+TGG | + | chr3.4:98623483-98623502 | MS.gene064830:CDS | 35.0% | |
| CTATGTGTGATTGTTTGATC+GGG | + | chr3.4:98623292-98623311 | MS.gene064830:intron | 35.0% | |
| CTCGTCAATTGAGATAGTAA+GGG | - | chr3.4:98623163-98623182 | None:intergenic | 35.0% | |
| CTTTCATGTACTTTCCAATC+AGG | - | chr3.4:98622934-98622953 | None:intergenic | 35.0% | |
| GAACTCTTATGTTACCTGAT+TGG | + | chr3.4:98622917-98622936 | MS.gene064830:intron | 35.0% | |
| GAACTTATATCAGTTCTTGG+TGG | - | chr3.4:98621279-98621298 | None:intergenic | 35.0% | |
| GAAGGCAATTAGAGATATTG+AGG | - | chr3.4:98622715-98622734 | None:intergenic | 35.0% | |
| GGTTATGATAGCTAATCTCT+TGG | + | chr3.4:98620989-98621008 | MS.gene064830:CDS | 35.0% | |
| TAGAAATGCACAATACCGTT+TGG | + | chr3.4:98621614-98621633 | MS.gene064830:CDS | 35.0% | |
| TAGGATTTAACTAGTAGTGC+TGG | + | chr3.4:98622611-98622630 | MS.gene064830:intron | 35.0% | |
| TATGTGTGATTGTTTGATCG+GGG | + | chr3.4:98623293-98623312 | MS.gene064830:intron | 35.0% | |
| TCACACTGAAATAAGAAGCA+TGG | - | chr3.4:98621516-98621535 | None:intergenic | 35.0% | |
| TCACTATAAAAACCAGCCTT+GGG | - | chr3.4:98623003-98623022 | None:intergenic | 35.0% | |
| TCTCGTCAATTGAGATAGTA+AGG | - | chr3.4:98623164-98623183 | None:intergenic | 35.0% | |
| TTATTTCCCAACTTTCTCTG+CGG | + | chr3.4:98621040-98621059 | MS.gene064830:CDS | 35.0% | |
| ! | AAATTTTAAGCGCAGGGAAT+GGG | - | chr3.4:98622531-98622550 | None:intergenic | 35.0% |
| ! | AATTAAACAAGTACCGTACG+GGG | - | chr3.4:98621100-98621119 | None:intergenic | 35.0% |
| ! | ATGGCTGTGACATTTTCTTT+TGG | + | chr3.4:98621905-98621924 | MS.gene064830:intron | 35.0% |
| ! | ATGTTTCAGGTGAAGTCATT+AGG | + | chr3.4:98622042-98622061 | MS.gene064830:CDS | 35.0% |
| ! | CTGATTGGAAAGTACATGAA+AGG | + | chr3.4:98622932-98622951 | MS.gene064830:intron | 35.0% |
| ! | GAAGTATTTGGATAACTCCT+AGG | + | chr3.4:98621743-98621762 | MS.gene064830:intron | 35.0% |
| ! | TAAATTTTAAGCGCAGGGAA+TGG | - | chr3.4:98622532-98622551 | None:intergenic | 35.0% |
| ! | TACAGACTAAAGCATTCACT+TGG | - | chr3.4:98621955-98621974 | None:intergenic | 35.0% |
| ! | TACATTTATAAAGCGCCTAC+TGG | + | chr3.4:98622658-98622677 | MS.gene064830:CDS | 35.0% |
| ! | TTTGGAACTGCAAGAAAGTT+TGG | + | chr3.4:98621632-98621651 | MS.gene064830:CDS | 35.0% |
| !! | TATGACATGGAAAGAGTACT+TGG | + | chr3.4:98623496-98623515 | MS.gene064830:CDS | 35.0% |
| !! | TTTATTGGTTGATGGTGGTT+GGG | + | chr3.4:98623446-98623465 | MS.gene064830:CDS | 35.0% |
| !! | TTTTTAGCATCCATTCTCTC+AGG | - | chr3.4:98622086-98622105 | None:intergenic | 35.0% |
| !!! | CTTGTCTTTTTGGGATTATG+TGG | + | chr3.4:98621707-98621726 | MS.gene064830:intron | 35.0% |
| AACTGTACCAAAAAGGATGC+GGG | + | chr3.4:98621166-98621185 | MS.gene064830:intron | 40.0% | |
| ACTTGTGAACGTAATTCCCA+TGG | + | chr3.4:98620444-98620463 | MS.gene064830:intron | 40.0% | |
| AGCACCAGGTAGGTTTAATA+TGG | + | chr3.4:98622449-98622468 | MS.gene064830:intron | 40.0% | |
| AGGCAAACCTTCATTTGAGT+AGG | - | chr3.4:98622695-98622714 | None:intergenic | 40.0% | |
| AGTAATGGCAAGCAAAGAGA+AGG | - | chr3.4:98623326-98623345 | None:intergenic | 40.0% | |
| ATATTCCAGACTATGCACCT+GGG | + | chr3.4:98622009-98622028 | MS.gene064830:CDS | 40.0% | |
| ATGTACAGTGTCATGATGAC+TGG | + | chr3.4:98621582-98621601 | MS.gene064830:CDS | 40.0% | |
| CAACATTATGCCATCTAGCT+GGG | + | chr3.4:98621451-98621470 | MS.gene064830:intron | 40.0% | |
| CAGACGGTGACAAATATGAT+TGG | + | chr3.4:98620842-98620861 | MS.gene064830:CDS | 40.0% | |
| CTAATTTCCTTTGTGTGTCG+TGG | + | chr3.4:98621774-98621793 | MS.gene064830:intron | 40.0% | |
| CTCACTATAAAAACCAGCCT+TGG | - | chr3.4:98623004-98623023 | None:intergenic | 40.0% | |
| GAACGTAATTCCCATGGAAT+AGG | + | chr3.4:98620450-98620469 | MS.gene064830:intron | 40.0% | |
| GAATAGGGCAAGTGTAGAAT+AGG | + | chr3.4:98620466-98620485 | MS.gene064830:intron | 40.0% | |
| GAGCAGAAGAGAAATCTTAC+TGG | + | chr3.4:98620613-98620632 | MS.gene064830:CDS | 40.0% | |
| GAGGAGTTAAATCGTCAAGT+TGG | + | chr3.4:98622134-98622153 | MS.gene064830:CDS | 40.0% | |
| GGGACACAAAAGAATGTTTC+AGG | + | chr3.4:98622029-98622048 | MS.gene064830:CDS | 40.0% | |
| TGAAGAAATCTAGTTGTGGC+AGG | - | chr3.4:98623257-98623276 | None:intergenic | 40.0% | |
| TGCAGATCCTACTCAAATGA+AGG | + | chr3.4:98622685-98622704 | MS.gene064830:CDS | 40.0% | |
| TTATGTTATTCCTCAGCCCA+AGG | + | chr3.4:98622984-98623003 | MS.gene064830:intron | 40.0% | |
| TTTCTCTTCTGCTCTTTGAC+TGG | - | chr3.4:98620607-98620626 | None:intergenic | 40.0% | |
| ! | ACCTTTTTATCTTGCACGTC+CGG | - | chr3.4:98621672-98621691 | None:intergenic | 40.0% |
| ! | GAAACATTCTTTTGTGTCCC+AGG | - | chr3.4:98622029-98622048 | None:intergenic | 40.0% |
| ! | TTTAACTAGTAGTGCTGGAG+AGG | + | chr3.4:98622616-98622635 | MS.gene064830:CDS | 40.0% |
| ! | TTTCAGGTGAAGTCATTAGG+TGG | + | chr3.4:98622045-98622064 | MS.gene064830:CDS | 40.0% |
| !! | ACTGCTTTATTGGTTGATGG+TGG | + | chr3.4:98623441-98623460 | MS.gene064830:CDS | 40.0% |
| !! | AGTTGCAAAAGTGCTCAGAT+TGG | + | chr3.4:98621200-98621219 | MS.gene064830:intron | 40.0% |
| !! | CTTTATTGGTTGATGGTGGT+TGG | + | chr3.4:98623445-98623464 | MS.gene064830:CDS | 40.0% |
| !!! | CAAGGCTGGTTTTTATAGTG+AGG | + | chr3.4:98623002-98623021 | MS.gene064830:intron | 40.0% |
| !!! | CGAGTGATAGTTTTAGCACT+AGG | + | chr3.4:98621411-98621430 | MS.gene064830:intron | 40.0% |
| !!! | GTGATAGTTTTAGCACTAGG+TGG | + | chr3.4:98621414-98621433 | MS.gene064830:intron | 40.0% |
| AATACTTGAAGCGGAGATCG+AGG | + | chr3.4:98622115-98622134 | MS.gene064830:CDS | 45.0% | |
| ACAGCCATTTAGCAGCAATG+AGG | - | chr3.4:98621893-98621912 | None:intergenic | 45.0% | |
| ACCTGAAATCTCTTGAGCCT+CGG | + | chr3.4:98622195-98622214 | MS.gene064830:CDS | 45.0% | |
| AGACTAACCGCAGAGAAAGT+TGG | - | chr3.4:98621050-98621069 | None:intergenic | 45.0% | |
| ATGAGGAAAGGATTCGAGAC+AGG | - | chr3.4:98623190-98623209 | None:intergenic | 45.0% | |
| CACTGTACATAAGCTGTGCA+AGG | - | chr3.4:98621572-98621591 | None:intergenic | 45.0% | |
| CAGTACAGATCAGCATAGAG+AGG | - | chr3.4:98622311-98622330 | None:intergenic | 45.0% | |
| CATAAGCTGTGCAAGGTTCT+CGG | - | chr3.4:98621565-98621584 | None:intergenic | 45.0% | |
| CTACACTTGCCCTATTCCAT+GGG | - | chr3.4:98620463-98620482 | None:intergenic | 45.0% | |
| GACTAACCGCAGAGAAAGTT+GGG | - | chr3.4:98621049-98621068 | None:intergenic | 45.0% | |
| GAGATAGTAAGGGCCTCTAT+TGG | - | chr3.4:98623153-98623172 | None:intergenic | 45.0% | |
| GATAGGCAGTTTCTACATGC+TGG | + | chr3.4:98620968-98620987 | MS.gene064830:intron | 45.0% | |
| GATATTCCAGACTATGCACC+TGG | + | chr3.4:98622008-98622027 | MS.gene064830:CDS | 45.0% | |
| GCAACATTATGCCATCTAGC+TGG | + | chr3.4:98621450-98621469 | MS.gene064830:intron | 45.0% | |
| GGAAATTAGCTACACACCCT+AGG | - | chr3.4:98621763-98621782 | None:intergenic | 45.0% | |
| GGACATGGGAGAAAAACAGA+AGG | - | chr3.4:98622733-98622752 | None:intergenic | 45.0% | |
| GGTGAATCCAAATCCCCTAA+CGG | + | chr3.4:98620341-98620360 | MS.gene064830:CDS | 45.0% | |
| GTCGAATTTGACAGACTGCA+AGG | - | chr3.4:98622786-98622805 | None:intergenic | 45.0% | |
| TACGGGGTAGAGCATACAAA+AGG | - | chr3.4:98621084-98621103 | None:intergenic | 45.0% | |
| TCCGGACGTGCAAGATAAAA+AGG | + | chr3.4:98621668-98621687 | MS.gene064830:CDS | 45.0% | |
| TCTACACTTGCCCTATTCCA+TGG | - | chr3.4:98620464-98620483 | None:intergenic | 45.0% | |
| TCTCCTTAAGAACGGGACAT+GGG | - | chr3.4:98622747-98622766 | None:intergenic | 45.0% | |
| TCTTGAGCCTCGGAATTTGA+AGG | + | chr3.4:98622205-98622224 | MS.gene064830:CDS | 45.0% | |
| TGAGGAAAGGATTCGAGACA+GGG | - | chr3.4:98623189-98623208 | None:intergenic | 45.0% | |
| TGCTATTCCACGACACACAA+AGG | - | chr3.4:98621784-98621803 | None:intergenic | 45.0% | |
| TGTGAATCAACCCAGCTAGA+TGG | - | chr3.4:98621464-98621483 | None:intergenic | 45.0% | |
| TGTGGATGCTATGAGACAGA+CGG | + | chr3.4:98620826-98620845 | MS.gene064830:CDS | 45.0% | |
| TTACATCTCTGTTCAGCACC+AGG | + | chr3.4:98622435-98622454 | MS.gene064830:intron | 45.0% | |
| TTCCATAAATTCCGGCTGCA+CGG | - | chr3.4:98620651-98620670 | None:intergenic | 45.0% | |
| TTTATCTTGCACGTCCGGAA+GGG | - | chr3.4:98621667-98621686 | None:intergenic | 45.0% | |
| TTTGACAGACTGCAAGGACA+AGG | - | chr3.4:98622780-98622799 | None:intergenic | 45.0% | |
| TTTGTATGCTCTACCCCGTA+CGG | + | chr3.4:98621084-98621103 | MS.gene064830:intron | 45.0% | |
| ! | CATTTCTGGACCTGAGAGAA+TGG | + | chr3.4:98622073-98622092 | MS.gene064830:CDS | 45.0% |
| ! | TCAGTTCTTGGTGGTCTTTC+TGG | - | chr3.4:98621270-98621289 | None:intergenic | 45.0% |
| ! | TTTGGAACAAGTTGCCCTTC+CGG | + | chr3.4:98621650-98621669 | MS.gene064830:CDS | 45.0% |
| ! | TTTTATCTTGCACGTCCGGA+AGG | - | chr3.4:98621668-98621687 | None:intergenic | 45.0% |
| !! | AAAAGTACCAGAGTGCCGTT+AGG | - | chr3.4:98620359-98620378 | None:intergenic | 45.0% |
| !! | AAAAGTGCTCAGATTGGCCT+GGG | + | chr3.4:98621206-98621225 | MS.gene064830:intron | 45.0% |
| !! | AAAGTACCAGAGTGCCGTTA+GGG | - | chr3.4:98620358-98620377 | None:intergenic | 45.0% |
| !! | TGTAAAAAGAGCACCTCCAC+CGG | + | chr3.4:98620676-98620695 | MS.gene064830:intron | 45.0% |
| !!! | AAAATAAATAATATTTTTGT+TGG | + | chr3.4:98621805-98621824 | MS.gene064830:intron | 5.0% |
| !!! | AAATAAATAATATTTTTGTT+GGG | + | chr3.4:98621806-98621825 | MS.gene064830:intron | 5.0% |
| ACAAGACAACACGTTACCGG+TGG | - | chr3.4:98620695-98620714 | None:intergenic | 50.0% | |
| ACTTGGAACTCCTGCAAAGC+TGG | + | chr3.4:98623513-98623532 | MS.gene064830:CDS | 50.0% | |
| AGTCCACATCAGCTGGATGA+AGG | - | chr3.4:98622272-98622291 | None:intergenic | 50.0% | |
| ATCTCTGTTCAGCACCAGGT+AGG | + | chr3.4:98622439-98622458 | MS.gene064830:intron | 50.0% | |
| GAGACTAGTGCATCCGAACT+TGG | + | chr3.4:98623415-98623434 | MS.gene064830:CDS | 50.0% | |
| GTCTCCTTAAGAACGGGACA+TGG | - | chr3.4:98622748-98622767 | None:intergenic | 50.0% | |
| TAAAAACCAGCCTTGGGCTG+AGG | - | chr3.4:98622997-98623016 | None:intergenic | 50.0% | |
| TAGGATCTGCAACAGCCAGT+AGG | - | chr3.4:98622676-98622695 | None:intergenic | 50.0% | |
| TCCGAGGCTCAAGAGATTTC+AGG | - | chr3.4:98622199-98622218 | None:intergenic | 50.0% | |
| TCTCCCATGTCCCGTTCTTA+AGG | + | chr3.4:98622741-98622760 | MS.gene064830:intron | 50.0% | |
| ! | TTTTAAGCGCAGGGAATGGG+AGG | - | chr3.4:98622528-98622547 | None:intergenic | 50.0% |
| !! | AAGTACCAGAGTGCCGTTAG+GGG | - | chr3.4:98620357-98620376 | None:intergenic | 50.0% |
| !! | CAAAAGTGCTCAGATTGGCC+TGG | + | chr3.4:98621205-98621224 | MS.gene064830:intron | 50.0% |
| AGACAACACGTTACCGGTGG+AGG | - | chr3.4:98620692-98620711 | None:intergenic | 55.0% | |
| AGCAGACAGTCCACATCAGC+TGG | - | chr3.4:98622279-98622298 | None:intergenic | 55.0% | |
| CAAATCCCCTAACGGCACTC+TGG | + | chr3.4:98620349-98620368 | MS.gene064830:CDS | 55.0% | |
| CACATCAGCTGGATGAAGGC+AGG | - | chr3.4:98622268-98622287 | None:intergenic | 55.0% | |
| CTGCCTTCATCCAGCTGATG+TGG | + | chr3.4:98622266-98622285 | MS.gene064830:intron | 55.0% | |
| GACCGTGCAGCCGGAATTTA+TGG | + | chr3.4:98620646-98620665 | MS.gene064830:CDS | 55.0% | |
| GGCAATTCAGCCAGCTTTGC+AGG | - | chr3.4:98623526-98623545 | None:intergenic | 55.0% | |
| GTATGTCAAGACCGTGCAGC+CGG | + | chr3.4:98620637-98620656 | MS.gene064830:CDS | 55.0% | |
| GTTATTCCTCAGCCCAAGGC+TGG | + | chr3.4:98622988-98623007 | MS.gene064830:intron | 55.0% | |
| GTTTGAACGCCAGTGTTCCC+AGG | - | chr3.4:98621226-98621245 | None:intergenic | 55.0% | |
| TGTGTCCCAGGTGCATAGTC+TGG | - | chr3.4:98622017-98622036 | None:intergenic | 55.0% | |
| ! | CGCTATGCCCGCATCCTTTT+TGG | - | chr3.4:98621176-98621195 | None:intergenic | 55.0% |
| ! | GGTCTTTCTGGCACGATGGT+CGG | - | chr3.4:98621258-98621277 | None:intergenic | 55.0% |
| ! | TGGTGGTCTTTCTGGCACGA+TGG | - | chr3.4:98621262-98621281 | None:intergenic | 55.0% |
| !! | CAGAGTGCCGTTAGGGGATT+TGG | - | chr3.4:98620351-98620370 | None:intergenic | 55.0% |
| !! | TCAGATTGGCCTGGGAACAC+TGG | + | chr3.4:98621214-98621233 | MS.gene064830:intron | 55.0% |
| AAGCTGGCTGAATTGCCGCC+AGG | + | chr3.4:98623529-98623548 | MS.gene064830:CDS | 60.0% | |
| ! | CTGGCACGATGGTCGGTTCT+TGG | - | chr3.4:98621251-98621270 | None:intergenic | 60.0% |
| ! | GCACGATGGTCGGTTCTTGG+CGG | - | chr3.4:98621248-98621267 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 98620333 | 98623564 | 98620333 | ID=MS.gene064830 |
| chr3.4 | mRNA | 98620333 | 98623564 | 98620333 | ID=MS.gene064830.t1;Parent=MS.gene064830 |
| chr3.4 | exon | 98620333 | 98620370 | 98620333 | ID=MS.gene064830.t1.exon1;Parent=MS.gene064830.t1 |
| chr3.4 | CDS | 98620333 | 98620370 | 98620333 | ID=cds.MS.gene064830.t1;Parent=MS.gene064830.t1 |
| chr3.4 | exon | 98620608 | 98620672 | 98620608 | ID=MS.gene064830.t1.exon2;Parent=MS.gene064830.t1 |
| chr3.4 | CDS | 98620608 | 98620672 | 98620608 | ID=cds.MS.gene064830.t1;Parent=MS.gene064830.t1 |
| chr3.4 | exon | 98620824 | 98620904 | 98620824 | ID=MS.gene064830.t1.exon3;Parent=MS.gene064830.t1 |
| chr3.4 | CDS | 98620824 | 98620904 | 98620824 | ID=cds.MS.gene064830.t1;Parent=MS.gene064830.t1 |
| chr3.4 | exon | 98620973 | 98621061 | 98620973 | ID=MS.gene064830.t1.exon4;Parent=MS.gene064830.t1 |
| chr3.4 | CDS | 98620973 | 98621061 | 98620973 | ID=cds.MS.gene064830.t1;Parent=MS.gene064830.t1 |
| chr3.4 | exon | 98621558 | 98621689 | 98621558 | ID=MS.gene064830.t1.exon5;Parent=MS.gene064830.t1 |
| chr3.4 | CDS | 98621558 | 98621689 | 98621558 | ID=cds.MS.gene064830.t1;Parent=MS.gene064830.t1 |
| chr3.4 | exon | 98622008 | 98622226 | 98622008 | ID=MS.gene064830.t1.exon6;Parent=MS.gene064830.t1 |
| chr3.4 | CDS | 98622008 | 98622226 | 98622008 | ID=cds.MS.gene064830.t1;Parent=MS.gene064830.t1 |
| chr3.4 | exon | 98622614 | 98622706 | 98622614 | ID=MS.gene064830.t1.exon7;Parent=MS.gene064830.t1 |
| chr3.4 | CDS | 98622614 | 98622706 | 98622614 | ID=cds.MS.gene064830.t1;Parent=MS.gene064830.t1 |
| chr3.4 | exon | 98623403 | 98623564 | 98623403 | ID=MS.gene064830.t1.exon8;Parent=MS.gene064830.t1 |
| chr3.4 | CDS | 98623403 | 98623564 | 98623403 | ID=cds.MS.gene064830.t1;Parent=MS.gene064830.t1 |
| Gene Sequence |
| Protein sequence |
