Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09570.t1 | XP_003611629.1 | 99.4 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 5.40E-174 | 620.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09570.t1 | Q9FN15 | 76.0 | 275 | 64 | 1 | 40 | 312 | 53 | 327 | 6.5e-120 | 431.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09570.t1 | G7IU15 | 99.4 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 3.9e-174 | 620.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene09570 | 0.810711 | 1.01E-50 | -1.69E-46 |
| MS.gene049170 | MS.gene09570 | 0.832773 | 7.81E-56 | -1.69E-46 |
| MS.gene049257 | MS.gene09570 | 0.817896 | 2.60E-52 | -1.69E-46 |
| MS.gene04932 | MS.gene09570 | -0.800913 | 1.15E-48 | -1.69E-46 |
| MS.gene049356 | MS.gene09570 | 0.848387 | 6.33E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene09570 | 0.819061 | 1.41E-52 | -1.69E-46 |
| MS.gene049396 | MS.gene09570 | 0.854848 | 9.36E-62 | -1.69E-46 |
| MS.gene049488 | MS.gene09570 | 0.840113 | 1.06E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene09570 | 0.856002 | 4.32E-62 | -1.69E-46 |
| MS.gene049633 | MS.gene09570 | 0.824545 | 7.62E-54 | -1.69E-46 |
| MS.gene049757 | MS.gene09570 | 0.815361 | 9.62E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene09570 | 0.834895 | 2.30E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene09570 | 0.821186 | 4.61E-53 | -1.69E-46 |
| MS.gene050133 | MS.gene09570 | -0.803386 | 3.57E-49 | -1.69E-46 |
| MS.gene050400 | MS.gene09570 | 0.839608 | 1.43E-57 | -1.69E-46 |
| MS.gene050426 | MS.gene09570 | -0.842025 | 3.33E-58 | -1.69E-46 |
| MS.gene050553 | MS.gene09570 | 0.86831 | 7.18E-66 | -1.69E-46 |
| MS.gene050593 | MS.gene09570 | 0.85472 | 1.02E-61 | -1.69E-46 |
| MS.gene050625 | MS.gene09570 | 0.830991 | 2.15E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene09570 | 0.889418 | 2.47E-73 | -1.69E-46 |
| MS.gene050747 | MS.gene09570 | 0.83417 | 3.50E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene09570 | 0.813211 | 2.87E-51 | -1.69E-46 |
| MS.gene050809 | MS.gene09570 | -0.807706 | 4.43E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene09570 | 0.839786 | 1.29E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene09570 | 0.886405 | 3.52E-72 | -1.69E-46 |
| MS.gene050868 | MS.gene09570 | 0.808156 | 3.56E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene09570 | 0.80845 | 3.08E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene09570 | 0.824745 | 6.83E-54 | -1.69E-46 |
| MS.gene050971 | MS.gene09570 | 0.828604 | 8.20E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene09570 | 0.856236 | 3.69E-62 | -1.69E-46 |
| MS.gene051360 | MS.gene09570 | 0.836488 | 9.08E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene09570 | 0.814402 | 1.57E-51 | -1.69E-46 |
| MS.gene051521 | MS.gene09570 | 0.8385 | 2.77E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene09570 | 0.877583 | 5.59E-69 | -1.69E-46 |
| MS.gene051552 | MS.gene09570 | -0.81196 | 5.39E-51 | -1.69E-46 |
| MS.gene051588 | MS.gene09570 | 0.832021 | 1.20E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene09570 | 0.819623 | 1.05E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene09570 | 0.849301 | 3.53E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene09570 | 0.913128 | 8.81E-84 | -1.69E-46 |
| MS.gene051874 | MS.gene09570 | 0.830291 | 3.19E-55 | -1.69E-46 |
| MS.gene051941 | MS.gene09570 | 0.816756 | 4.69E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene09570 | -0.824565 | 7.53E-54 | -1.69E-46 |
| MS.gene052134 | MS.gene09570 | 0.875844 | 2.24E-68 | -1.69E-46 |
| MS.gene052135 | MS.gene09570 | 0.867482 | 1.33E-65 | -1.69E-46 |
| MS.gene052136 | MS.gene09570 | 0.869819 | 2.33E-66 | -1.69E-46 |
| MS.gene052164 | MS.gene09570 | 0.800977 | 1.12E-48 | -1.69E-46 |
| MS.gene052188 | MS.gene09570 | 0.842322 | 2.78E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene09570 | 0.815581 | 8.59E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene09570 | 0.821759 | 3.40E-53 | -1.69E-46 |
| MS.gene052346 | MS.gene09570 | 0.871227 | 8.03E-67 | -1.69E-46 |
| MS.gene05240 | MS.gene09570 | -0.801719 | 7.88E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene09570 | 0.920057 | 2.07E-87 | -1.69E-46 |
| MS.gene052421 | MS.gene09570 | 0.83064 | 2.62E-55 | -1.69E-46 |
| MS.gene052469 | MS.gene09570 | 0.839742 | 1.32E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene09570 | 0.855455 | 6.24E-62 | -1.69E-46 |
| MS.gene052484 | MS.gene09570 | 0.836826 | 7.45E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene09570 | 0.818399 | 2.00E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene09570 | 0.863101 | 3.16E-64 | -1.69E-46 |
| MS.gene052503 | MS.gene09570 | 0.836603 | 8.50E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene09570 | 0.860182 | 2.47E-63 | -1.69E-46 |
| MS.gene052615 | MS.gene09570 | 0.811436 | 7.01E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene09570 | 0.829437 | 5.15E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene09570 | 0.833152 | 6.29E-56 | -1.69E-46 |
| MS.gene052870 | MS.gene09570 | 0.818291 | 2.12E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene09570 | 0.817845 | 2.67E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene09570 | 0.819007 | 1.46E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene09570 | 0.86799 | 9.10E-66 | -1.69E-46 |
| MS.gene052999 | MS.gene09570 | 0.824519 | 7.73E-54 | -1.69E-46 |
| MS.gene053103 | MS.gene09570 | 0.806963 | 6.37E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene09570 | 0.804886 | 1.74E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene09570 | 0.831762 | 1.39E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene09570 | 0.814192 | 1.75E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene09570 | 0.807825 | 4.18E-50 | -1.69E-46 |
| MS.gene053318 | MS.gene09570 | 0.804648 | 1.95E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene09570 | 0.872555 | 2.91E-67 | -1.69E-46 |
| MS.gene053479 | MS.gene09570 | 0.810597 | 1.06E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene09570 | 0.827457 | 1.55E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene09570 | 0.808689 | 2.74E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene09570 | 0.855988 | 4.36E-62 | -1.69E-46 |
| MS.gene053912 | MS.gene09570 | 0.879401 | 1.28E-69 | -1.69E-46 |
| MS.gene054349 | MS.gene09570 | 0.813144 | 2.97E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene09570 | 0.825094 | 5.65E-54 | -1.69E-46 |
| MS.gene054719 | MS.gene09570 | 0.802093 | 6.61E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene09570 | -0.805119 | 1.56E-49 | -1.69E-46 |
| MS.gene054884 | MS.gene09570 | -0.830991 | 2.15E-55 | -1.69E-46 |
| MS.gene054927 | MS.gene09570 | 0.828939 | 6.80E-55 | -1.69E-46 |
| MS.gene05494 | MS.gene09570 | 0.855947 | 4.48E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene09570 | 0.813417 | 2.59E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene09570 | 0.832663 | 8.31E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene09570 | 0.822238 | 2.64E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene09570 | 0.83534 | 1.78E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene09570 | 0.826671 | 2.39E-54 | -1.69E-46 |
| MS.gene055369 | MS.gene09570 | 0.826668 | 2.39E-54 | -1.69E-46 |
| MS.gene055539 | MS.gene09570 | 0.87942 | 1.26E-69 | -1.69E-46 |
| MS.gene05553 | MS.gene09570 | 0.842839 | 2.02E-58 | -1.69E-46 |
| MS.gene05556 | MS.gene09570 | 0.849371 | 3.37E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene09570 | 0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene09570 | 0.811191 | 7.92E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene09570 | 0.905484 | 4.09E-80 | -1.69E-46 |
| MS.gene055744 | MS.gene09570 | 0.910987 | 1.01E-82 | -1.69E-46 |
| MS.gene055892 | MS.gene09570 | 0.817738 | 2.82E-52 | -1.69E-46 |
| MS.gene055893 | MS.gene09570 | 0.824444 | 8.04E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene09570 | 0.818202 | 2.22E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene09570 | 0.835999 | 1.21E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene09570 | 0.837274 | 5.73E-57 | -1.69E-46 |
| MS.gene055941 | MS.gene09570 | 0.828594 | 8.24E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene09570 | 0.884231 | 2.29E-71 | -1.69E-46 |
| MS.gene056387 | MS.gene09570 | 0.815945 | 7.13E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene09570 | 0.83013 | 3.49E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene09570 | 0.868643 | 5.61E-66 | -1.69E-46 |
| MS.gene056514 | MS.gene09570 | 0.834103 | 3.64E-56 | -1.69E-46 |
| MS.gene05664 | MS.gene09570 | 0.822206 | 2.68E-53 | -1.69E-46 |
| MS.gene05666 | MS.gene09570 | 0.808616 | 2.84E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene09570 | 0.854085 | 1.56E-61 | -1.69E-46 |
| MS.gene057019 | MS.gene09570 | 0.82654 | 2.57E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene09570 | 0.857491 | 1.57E-62 | -1.69E-46 |
| MS.gene057086 | MS.gene09570 | 0.847164 | 1.37E-59 | -1.69E-46 |
| MS.gene057124 | MS.gene09570 | 0.886087 | 4.64E-72 | -1.69E-46 |
| MS.gene057289 | MS.gene09570 | 0.842408 | 2.63E-58 | -1.69E-46 |
| MS.gene057396 | MS.gene09570 | 0.807878 | 4.08E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene09570 | 0.818162 | 2.26E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene09570 | 0.875177 | 3.78E-68 | -1.69E-46 |
| MS.gene057749 | MS.gene09570 | 0.832445 | 9.41E-56 | -1.69E-46 |
| MS.gene057823 | MS.gene09570 | 0.840608 | 7.85E-58 | -1.69E-46 |
| MS.gene057856 | MS.gene09570 | 0.874961 | 4.48E-68 | -1.69E-46 |
| MS.gene057857 | MS.gene09570 | 0.805126 | 1.55E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene09570 | 0.854524 | 1.16E-61 | -1.69E-46 |
| MS.gene058120 | MS.gene09570 | 0.855557 | 5.83E-62 | -1.69E-46 |
| MS.gene058130 | MS.gene09570 | 0.804555 | 2.04E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene09570 | 0.81568 | 8.16E-52 | -1.69E-46 |
| MS.gene058376 | MS.gene09570 | 0.866544 | 2.64E-65 | -1.69E-46 |
| MS.gene05837 | MS.gene09570 | 0.825453 | 4.65E-54 | -1.69E-46 |
| MS.gene058418 | MS.gene09570 | -0.805933 | 1.05E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene09570 | 0.901008 | 4.14E-78 | -1.69E-46 |
| MS.gene058448 | MS.gene09570 | 0.824873 | 6.38E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene09570 | 0.886179 | 4.28E-72 | -1.69E-46 |
| MS.gene058838 | MS.gene09570 | 0.857087 | 2.07E-62 | -1.69E-46 |
| MS.gene058928 | MS.gene09570 | 0.826385 | 2.79E-54 | -1.69E-46 |
| MS.gene058948 | MS.gene09570 | 0.853077 | 3.03E-61 | -1.69E-46 |
| MS.gene059011 | MS.gene09570 | 0.806694 | 7.26E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene09570 | 0.824276 | 8.81E-54 | -1.69E-46 |
| MS.gene059366 | MS.gene09570 | 0.831282 | 1.82E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene09570 | 0.853268 | 2.67E-61 | -1.69E-46 |
| MS.gene059455 | MS.gene09570 | 0.852986 | 3.22E-61 | -1.69E-46 |
| MS.gene059667 | MS.gene09570 | 0.844146 | 9.06E-59 | -1.69E-46 |
| MS.gene059674 | MS.gene09570 | 0.836487 | 9.09E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene09570 | 0.839407 | 1.61E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene09570 | 0.815931 | 7.18E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene09570 | 0.817708 | 2.87E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene09570 | 0.84272 | 2.18E-58 | -1.69E-46 |
| MS.gene059807 | MS.gene09570 | 0.835728 | 1.42E-56 | -1.69E-46 |
| MS.gene059946 | MS.gene09570 | 0.812128 | 4.95E-51 | -1.69E-46 |
| MS.gene060087 | MS.gene09570 | -0.806768 | 7.01E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene09570 | 0.855724 | 5.21E-62 | -1.69E-46 |
| MS.gene060403 | MS.gene09570 | 0.849662 | 2.80E-60 | -1.69E-46 |
| MS.gene060485 | MS.gene09570 | 0.81859 | 1.81E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene09570 | 0.801481 | 8.82E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene09570 | 0.870639 | 1.25E-66 | -1.69E-46 |
| MS.gene060837 | MS.gene09570 | 0.878965 | 1.83E-69 | -1.69E-46 |
| MS.gene06092 | MS.gene09570 | 0.824535 | 7.66E-54 | -1.69E-46 |
| MS.gene06097 | MS.gene09570 | 0.827239 | 1.75E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene09570 | 0.875938 | 2.08E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09570.t1 | MTR_5g016100 | 99.359 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 0.0 | 637 |
| MS.gene09570.t1 | MTR_5g016100 | 100.000 | 225 | 0 | 0 | 88 | 312 | 1 | 225 | 1.17e-164 | 457 |
| MS.gene09570.t1 | MTR_1g016360 | 47.205 | 161 | 84 | 1 | 66 | 225 | 50 | 210 | 2.77e-43 | 149 |
| MS.gene09570.t1 | MTR_1g016360 | 44.853 | 136 | 74 | 1 | 66 | 200 | 50 | 185 | 7.87e-34 | 123 |
| MS.gene09570.t1 | MTR_1g016360 | 39.496 | 119 | 71 | 1 | 66 | 183 | 50 | 168 | 8.52e-23 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09570.t1 | AT5G67370 | 67.278 | 327 | 92 | 3 | 1 | 312 | 1 | 327 | 4.92e-147 | 416 |
| MS.gene09570.t1 | AT5G11840 | 39.370 | 254 | 139 | 7 | 12 | 262 | 11 | 252 | 1.59e-46 | 158 |
| MS.gene09570.t1 | AT5G11840 | 42.079 | 202 | 105 | 5 | 12 | 210 | 11 | 203 | 1.02e-40 | 141 |
| MS.gene09570.t1 | AT5G11840 | 43.684 | 190 | 95 | 5 | 12 | 198 | 11 | 191 | 7.35e-40 | 139 |
| MS.gene09570.t1 | AT5G11840 | 39.655 | 174 | 93 | 5 | 12 | 182 | 11 | 175 | 3.25e-29 | 111 |
Find 78 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAAAGTTAAGGCCATAAA+AGG | 0.256213 | 5.2:+7748227 | MS.gene09570:CDS |
| GATTGTCTTGAGGATATATC+TGG | 0.307364 | 5.2:+7749142 | MS.gene09570:CDS |
| AACGAACCATGGTTGCTTCC+CGG | 0.333037 | 5.2:-7748158 | None:intergenic |
| GCTGTATTCATGGGGAGAAC+TGG | 0.347057 | 5.2:+7748794 | MS.gene09570:CDS |
| CTAAAGCTTGCAGCTGCAAT+TGG | 0.364895 | 5.2:-7748882 | None:intergenic |
| AAATTCGCACTTACTCTAGA+AGG | 0.375714 | 5.2:-7748906 | None:intergenic |
| GGAGAAACAAGTGGATCTTC+AGG | 0.375718 | 5.2:+7748260 | MS.gene09570:CDS |
| TCAACACAAAGTACAATCTA+AGG | 0.377796 | 5.2:+7750307 | MS.gene09570:CDS |
| TGCTTCAGCAATTTAACAAC+TGG | 0.384909 | 5.2:-7750153 | None:intergenic |
| ACGGGTTTCCATTAAAGTTA+AGG | 0.392385 | 5.2:+7748217 | MS.gene09570:CDS |
| TACCATCCACTTTCTTCATA+AGG | 0.394550 | 5.2:-7749487 | None:intergenic |
| GATCCTCCCATTTGCAGTAC+TGG | 0.400519 | 5.2:-7750535 | None:intergenic |
| CATACCGGTCTTTGCTCAAA+AGG | 0.406196 | 5.2:-7748317 | None:intergenic |
| GGGTCGTTCTTTCTTCGCCT+TGG | 0.406243 | 5.2:+7748822 | MS.gene09570:CDS |
| TCATGGGGAGAACTGGGTCC+AGG | 0.410922 | 5.2:+7748801 | MS.gene09570:CDS |
| GTGGATCTTCAGGAGGTAGC+TGG | 0.417633 | 5.2:+7748270 | MS.gene09570:CDS |
| TTGCTGAAGCAAACTCTAGT+TGG | 0.417913 | 5.2:+7750165 | MS.gene09570:CDS |
| TCTTGCAGCTGCTGCTGCTG+AGG | 0.421207 | 5.2:+7750454 | MS.gene09570:CDS |
| AACTGCAAGACAAACTAAAC+CGG | 0.436110 | 5.2:+7748139 | MS.gene09570:CDS |
| GCTGCTGCTGAGGCTGCAGA+TGG | 0.438479 | 5.2:+7750464 | MS.gene09570:CDS |
| CAGGAGGCCAGTACTGCAAA+TGG | 0.438936 | 5.2:+7750528 | MS.gene09570:CDS |
| TTCTTCGCCTTGGAGGTCTC+TGG | 0.439796 | 5.2:+7748832 | MS.gene09570:CDS |
| TTTATACTAGCTGCTGGAAC+AGG | 0.441314 | 5.2:+7749098 | MS.gene09570:CDS |
| CCTAGCTCGTGATAGATTGT+TGG | 0.448412 | 5.2:+7749986 | MS.gene09570:CDS |
| CTAGCTCGTGATAGATTGTT+GGG | 0.458803 | 5.2:+7749987 | MS.gene09570:CDS |
| GGGACTTCAATTTCCAATCC+AGG | 0.460451 | 5.2:-7748296 | None:intergenic |
| GGTTTAGTTTGTCTTGCAGT+TGG | 0.461505 | 5.2:-7748137 | None:intergenic |
| TCAGGAGGTAGCTGGGATCC+TGG | 0.464576 | 5.2:+7748278 | MS.gene09570:CDS |
| TTGTACTTTGTGTTGACCTT+GGG | 0.465912 | 5.2:-7750300 | None:intergenic |
| TTGGCAGTGTTCACAGTGCT+TGG | 0.468253 | 5.2:+7748855 | MS.gene09570:CDS |
| AGGATGGAATGCTGTATTCA+TGG | 0.479665 | 5.2:+7748784 | MS.gene09570:CDS |
| TAGATTGTTGGGCTCTTACA+AGG | 0.485638 | 5.2:+7749998 | MS.gene09570:CDS |
| AACCTATCTCTACAGTATAC+TGG | 0.487242 | 5.2:-7750491 | None:intergenic |
| ACTGGAGCATTGCTTGTCAC+TGG | 0.490569 | 5.2:+7750189 | MS.gene09570:CDS |
| TGCTGAAGCAAACTCTAGTT+GGG | 0.491191 | 5.2:+7750166 | MS.gene09570:CDS |
| TCGTTCTTTCTTCGCCTTGG+AGG | 0.501822 | 5.2:+7748825 | MS.gene09570:CDS |
| CTGTATTCATGGGGAGAACT+GGG | 0.507278 | 5.2:+7748795 | MS.gene09570:CDS |
| GTCATTCCTTATGAAGAAAG+TGG | 0.511705 | 5.2:+7749481 | MS.gene09570:CDS |
| TCGTCCGCTTTCACATCTGC+AGG | 0.511726 | 5.2:-7750428 | None:intergenic |
| GCCATAAAAGGTGAGATGAA+TGG | 0.514026 | 5.2:+7748239 | MS.gene09570:CDS |
| CTGAGATTTATACTAGCTGC+TGG | 0.524640 | 5.2:+7749092 | MS.gene09570:CDS |
| AAATGAGTACTCATCTTTGA+AGG | 0.527068 | 5.2:+7748764 | MS.gene09570:CDS |
| AAGCAAACTCTAGTTGGGAC+TGG | 0.534146 | 5.2:+7750171 | MS.gene09570:CDS |
| GACCAGTATACTGTAGAGAT+AGG | 0.539279 | 5.2:+7750489 | MS.gene09570:CDS |
| AGGTAGCTGGGATCCTGGAT+TGG | 0.543722 | 5.2:+7748283 | MS.gene09570:CDS |
| TGGATCTTCAGGAGGTAGCT+GGG | 0.548745 | 5.2:+7748271 | MS.gene09570:CDS |
| TTGTGTCTTTGATTGTCTTG+AGG | 0.548909 | 5.2:+7749132 | MS.gene09570:CDS |
| GAGTACTCATCTTTGAAGGA+TGG | 0.549927 | 5.2:+7748768 | MS.gene09570:CDS |
| GTTGACCTTGGGAACTTGAA+CGG | 0.554757 | 5.2:-7750289 | None:intergenic |
| ATTGTACTTTGTGTTGACCT+TGG | 0.556950 | 5.2:-7750301 | None:intergenic |
| ATACCGGTCTTTGCTCAAAA+GGG | 0.558808 | 5.2:-7748316 | None:intergenic |
| AGGAGGCCAGTACTGCAAAT+GGG | 0.560894 | 5.2:+7750529 | MS.gene09570:CDS |
| GAATGAAGAAAATTCTCCAC+TGG | 0.565797 | 5.2:-7750237 | None:intergenic |
| CCAACAATCTATCACGAGCT+AGG | 0.567433 | 5.2:-7749986 | None:intergenic |
| ATTTATCTTTGCTACACCAG+TGG | 0.569868 | 5.2:+7750221 | MS.gene09570:CDS |
| TCGCCTTGGAGGTCTCTGGT+TGG | 0.574053 | 5.2:+7748836 | MS.gene09570:CDS |
| GAAGAAAGTGGATGGTATGA+CGG | 0.576103 | 5.2:+7749493 | MS.gene09570:CDS |
| GGATGGAATGCTGTATTCAT+GGG | 0.587098 | 5.2:+7748785 | MS.gene09570:CDS |
| CATGGGGAGAACTGGGTCCA+GGG | 0.587436 | 5.2:+7748802 | MS.gene09570:CDS |
| ATCAACCGTTCAAGTTCCCA+AGG | 0.607453 | 5.2:+7750284 | MS.gene09570:CDS |
| TTCCTTATGAAGAAAGTGGA+TGG | 0.609524 | 5.2:+7749485 | MS.gene09570:CDS |
| ATGCAGGGGTGGAGTTATGT+TGG | 0.613989 | 5.2:+7749439 | MS.gene09570:intron |
| AGGCGAAGAAAGAACGACCC+TGG | 0.620568 | 5.2:-7748819 | None:intergenic |
| ACTAAACCGGGAAGCAACCA+TGG | 0.621555 | 5.2:+7748152 | MS.gene09570:CDS |
| TAATGTGTACTGTAGAAAGG+AGG | 0.641199 | 5.2:+7750391 | MS.gene09570:intron |
| TTTGGATGATGAACGAACCA+TGG | 0.644971 | 5.2:-7748169 | None:intergenic |
| ACTGCAAGACAAACTAAACC+GGG | 0.646464 | 5.2:+7748140 | MS.gene09570:CDS |
| ATTGCCTGCAGATGTGAAAG+CGG | 0.647332 | 5.2:+7750424 | MS.gene09570:CDS |
| GATGTGGGTCAAGCCGCCCG+AGG | 0.654400 | 5.2:+7749519 | MS.gene09570:CDS |
| ATGGTATGACGGACAGATGT+GGG | 0.654790 | 5.2:+7749504 | MS.gene09570:CDS |
| GAGATGAATGGAGAAACAAG+TGG | 0.659434 | 5.2:+7748251 | MS.gene09570:CDS |
| GTTAAGAGACTAACCTCGGG+CGG | 0.676465 | 5.2:-7749532 | None:intergenic |
| CTGCCAACCAGAGACCTCCA+AGG | 0.677013 | 5.2:-7748839 | None:intergenic |
| AGGCCAGTACTGCAAATGGG+AGG | 0.682389 | 5.2:+7750532 | MS.gene09570:CDS |
| GATGGTATGACGGACAGATG+TGG | 0.687282 | 5.2:+7749503 | MS.gene09570:CDS |
| GATGGAATGCTGTATTCATG+GGG | 0.687693 | 5.2:+7748786 | MS.gene09570:CDS |
| GAAACAAGTGGATCTTCAGG+AGG | 0.690118 | 5.2:+7748263 | MS.gene09570:CDS |
| GCAGCTAGTATAAATCTCAG+AGG | 0.718109 | 5.2:-7749089 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAGAAAAAATCAAAATAT+TGG | + | chr5.2:7748527-7748546 | MS.gene09570:intron | 15.0% |
| !!! | TATAAGAAACATTTTTTAGT+GGG | - | chr5.2:7748703-7748722 | None:intergenic | 15.0% |
| !!! | TTATAAGAAACATTTTTTAG+TGG | - | chr5.2:7748704-7748723 | None:intergenic | 15.0% |
| !! | AAATAAACTTTGATATTGCA+TGG | + | chr5.2:7748402-7748421 | MS.gene09570:intron | 20.0% |
| !! | AAGTATATGTGTATAATGAT+TGG | + | chr5.2:7748931-7748950 | MS.gene09570:intron | 20.0% |
| !! | AGTATATGTGTATAATGATT+GGG | + | chr5.2:7748932-7748951 | MS.gene09570:intron | 20.0% |
| !! | ATATTAGAGTATGTATTTCA+TGG | + | chr5.2:7748560-7748579 | MS.gene09570:intron | 20.0% |
| !! | ATGCAATATCAAAGTTTATT+TGG | - | chr5.2:7748403-7748422 | None:intergenic | 20.0% |
| !! | CATTAAAAGTTTCAATGATA+TGG | - | chr5.2:7750376-7750395 | None:intergenic | 20.0% |
| !!! | CTTACAATTTTAAAGACAAA+AGG | - | chr5.2:7749791-7749810 | None:intergenic | 20.0% |
| !!! | GCTTCATTTCTTTAAATTTT+TGG | + | chr5.2:7749929-7749948 | MS.gene09570:intron | 20.0% |
| !!! | TAAAAGAAAGTATCAGAAAA+AGG | + | chr5.2:7748503-7748522 | MS.gene09570:intron | 20.0% |
| !!! | TTTTTACTTTTAGGTAAAAG+AGG | - | chr5.2:7749573-7749592 | None:intergenic | 20.0% |
| ! | AAAAAGAACAGAGATAGAAA+GGG | + | chr5.2:7748458-7748477 | MS.gene09570:intron | 25.0% |
| ! | ACTCATTAAGCTGAATAATT+AGG | + | chr5.2:7750053-7750072 | MS.gene09570:intron | 25.0% |
| ! | ATCCCAATCATTTCATTATT+GGG | + | chr5.2:7749194-7749213 | MS.gene09570:intron | 25.0% |
| ! | ATTAAAGTTAAGGCCATAAA+AGG | + | chr5.2:7748227-7748246 | MS.gene09570:CDS | 25.0% |
| ! | TAAAAAGAACAGAGATAGAA+AGG | + | chr5.2:7748457-7748476 | MS.gene09570:intron | 25.0% |
| ! | TAAAAGTTTCAATGATATGG+TGG | - | chr5.2:7750373-7750392 | None:intergenic | 25.0% |
| ! | TATAACATTTCATGCTAACT+TGG | + | chr5.2:7748719-7748738 | MS.gene09570:intron | 25.0% |
| ! | TTTATTGCATTTAACCTAGT+GGG | + | chr5.2:7749288-7749307 | MS.gene09570:intron | 25.0% |
| !! | TTTTAATGTGTACTGTAGAA+AGG | + | chr5.2:7750388-7750407 | MS.gene09570:intron | 25.0% |
| !!! | GGACTTTTGTTTTTACTTTT+AGG | - | chr5.2:7749582-7749601 | None:intergenic | 25.0% |
| !!! | GTCTTTAAAATTGTAAGAGA+TGG | + | chr5.2:7749794-7749813 | MS.gene09570:intron | 25.0% |
| !!! | TTTTATGGCCTTAACTTTAA+TGG | - | chr5.2:7748228-7748247 | None:intergenic | 25.0% |
| AAATGAGTACTCATCTTTGA+AGG | + | chr5.2:7748764-7748783 | MS.gene09570:CDS | 30.0% | |
| AACCTATTGTTTATTCTCTC+TGG | - | chr5.2:7749764-7749783 | None:intergenic | 30.0% | |
| ACAAGCAGTCTATTCAAAAT+TGG | + | chr5.2:7749831-7749850 | MS.gene09570:intron | 30.0% | |
| ACTGTGGTTAAGAAATTAAC+TGG | + | chr5.2:7749410-7749429 | MS.gene09570:intron | 30.0% | |
| ATCCCCAATAATGAAATGAT+TGG | - | chr5.2:7749200-7749219 | None:intergenic | 30.0% | |
| ATTTCATTATTGGGGATCAT+GGG | + | chr5.2:7749203-7749222 | MS.gene09570:intron | 30.0% | |
| CATCCCAATCATTTCATTAT+TGG | + | chr5.2:7749193-7749212 | MS.gene09570:intron | 30.0% | |
| CTTTATTGCATTTAACCTAG+TGG | + | chr5.2:7749287-7749306 | MS.gene09570:intron | 30.0% | |
| GAGAGAATAAACAATAGGTT+AGG | + | chr5.2:7749764-7749783 | MS.gene09570:intron | 30.0% | |
| TCAACACAAAGTACAATCTA+AGG | + | chr5.2:7750307-7750326 | MS.gene09570:CDS | 30.0% | |
| TCCCAATCATTTCATTATTG+GGG | + | chr5.2:7749195-7749214 | MS.gene09570:intron | 30.0% | |
| TCCCCAATAATGAAATGATT+GGG | - | chr5.2:7749199-7749218 | None:intergenic | 30.0% | |
| TTAGATAAAGACAAGACCAT+TGG | + | chr5.2:7749703-7749722 | MS.gene09570:intron | 30.0% | |
| TTGATATTGCATGGTGTAAT+AGG | + | chr5.2:7748411-7748430 | MS.gene09570:intron | 30.0% | |
| ! | ACAAAGTACAATCTAAGGTA+AGG | + | chr5.2:7750312-7750331 | MS.gene09570:intron | 30.0% |
| ! | AGCTTCAAAATTTTCTCAAC+GGG | + | chr5.2:7748199-7748218 | MS.gene09570:CDS | 30.0% |
| ! | ATTTAACAACTGGTTTAACC+TGG | - | chr5.2:7750146-7750165 | None:intergenic | 30.0% |
| ! | GAGCTTCAAAATTTTCTCAA+CGG | + | chr5.2:7748198-7748217 | MS.gene09570:CDS | 30.0% |
| !! | GGTTGATTTATTTTCTTCTG+TGG | - | chr5.2:7750271-7750290 | None:intergenic | 30.0% |
| !!! | ATTTTGAAGCTCTTGGATTT+TGG | - | chr5.2:7748190-7748209 | None:intergenic | 30.0% |
| !!! | TGAGAAAATTTTGAAGCTCT+TGG | - | chr5.2:7748197-7748216 | None:intergenic | 30.0% |
| AAAGAAATGAAGCATGTTGC+TGG | - | chr5.2:7749922-7749941 | None:intergenic | 35.0% | |
| AAAGACAAGACCATTGGTAA+AGG | + | chr5.2:7749709-7749728 | MS.gene09570:intron | 35.0% | |
| AAATTCGCACTTACTCTAGA+AGG | - | chr5.2:7748909-7748928 | None:intergenic | 35.0% | |
| AACCTATCTCTACAGTATAC+TGG | - | chr5.2:7750494-7750513 | None:intergenic | 35.0% | |
| AACTGCAAGACAAACTAAAC+CGG | + | chr5.2:7748139-7748158 | MS.gene09570:CDS | 35.0% | |
| AAGCTGAATAATTAGGATGC+AGG | + | chr5.2:7750060-7750079 | MS.gene09570:intron | 35.0% | |
| AATTAACTGGATCACAATGC+AGG | + | chr5.2:7749423-7749442 | MS.gene09570:intron | 35.0% | |
| ACGGGTTTCCATTAAAGTTA+AGG | + | chr5.2:7748217-7748236 | MS.gene09570:CDS | 35.0% | |
| AGAAAGGGAGGATAAAAATG+AGG | + | chr5.2:7748473-7748492 | MS.gene09570:intron | 35.0% | |
| AGCTGAATAATTAGGATGCA+GGG | + | chr5.2:7750061-7750080 | MS.gene09570:intron | 35.0% | |
| AGTACTCCTGAAGATATTGT+AGG | - | chr5.2:7750349-7750368 | None:intergenic | 35.0% | |
| ATTAACTGGATCACAATGCA+GGG | + | chr5.2:7749424-7749443 | MS.gene09570:intron | 35.0% | |
| ATTCAAGGTGTAGATTCACT+GGG | + | chr5.2:7749631-7749650 | MS.gene09570:intron | 35.0% | |
| ATTTATCTTTGCTACACCAG+TGG | + | chr5.2:7750221-7750240 | MS.gene09570:CDS | 35.0% | |
| CAAGATCCTACAATATCTTC+AGG | + | chr5.2:7750340-7750359 | MS.gene09570:intron | 35.0% | |
| CACACACATACAAACTGAAA+CGG | + | chr5.2:7748633-7748652 | MS.gene09570:intron | 35.0% | |
| CATTTCATTATTGGGGATCA+TGG | + | chr5.2:7749202-7749221 | MS.gene09570:intron | 35.0% | |
| GAATGAAGAAAATTCTCCAC+TGG | - | chr5.2:7750240-7750259 | None:intergenic | 35.0% | |
| GATTGTCTTGAGGATATATC+TGG | + | chr5.2:7749142-7749161 | MS.gene09570:CDS | 35.0% | |
| GGAATATGTCATGGTCTAAT+AGG | + | chr5.2:7748740-7748759 | MS.gene09570:intron | 35.0% | |
| GTAGTTGTCTACATACATAC+CGG | - | chr5.2:7748335-7748354 | None:intergenic | 35.0% | |
| GTCATTCCTTATGAAGAAAG+TGG | + | chr5.2:7749481-7749500 | MS.gene09570:CDS | 35.0% | |
| GTCCAGAGAGAATAAACAAT+AGG | + | chr5.2:7749759-7749778 | MS.gene09570:intron | 35.0% | |
| GTGAATCTACACCTTGAATA+TGG | - | chr5.2:7749630-7749649 | None:intergenic | 35.0% | |
| GTGTAATAGGATATTCCCTT+TGG | + | chr5.2:7748424-7748443 | MS.gene09570:intron | 35.0% | |
| TAATGTGTACTGTAGAAAGG+AGG | + | chr5.2:7750391-7750410 | MS.gene09570:intron | 35.0% | |
| TACCATCCACTTTCTTCATA+AGG | - | chr5.2:7749490-7749509 | None:intergenic | 35.0% | |
| TAGGATCTGCAAAGAGAAAT+AGG | - | chr5.2:7749970-7749989 | None:intergenic | 35.0% | |
| TATTCAAGGTGTAGATTCAC+TGG | + | chr5.2:7749630-7749649 | MS.gene09570:intron | 35.0% | |
| TGCTAACTTGGAATATGTCA+TGG | + | chr5.2:7748731-7748750 | MS.gene09570:intron | 35.0% | |
| TGCTTCAGCAATTTAACAAC+TGG | - | chr5.2:7750156-7750175 | None:intergenic | 35.0% | |
| TGTTCACACGTAAAAAACTG+TGG | + | chr5.2:7749394-7749413 | MS.gene09570:intron | 35.0% | |
| TTCCTTATGAAGAAAGTGGA+TGG | + | chr5.2:7749485-7749504 | MS.gene09570:CDS | 35.0% | |
| TTGTGTCTTTGATTGTCTTG+AGG | + | chr5.2:7749132-7749151 | MS.gene09570:CDS | 35.0% | |
| TTTCATTATTGGGGATCATG+GGG | + | chr5.2:7749204-7749223 | MS.gene09570:intron | 35.0% | |
| ! | ATTGTACTTTGTGTTGACCT+TGG | - | chr5.2:7750304-7750323 | None:intergenic | 35.0% |
| ! | TCCATTCATCTCACCTTTTA+TGG | - | chr5.2:7748243-7748262 | None:intergenic | 35.0% |
| ! | TTGTACTTTGTGTTGACCTT+GGG | - | chr5.2:7750303-7750322 | None:intergenic | 35.0% |
| ! | TTTTAACCTCTCAGTCCAAA+GGG | - | chr5.2:7748442-7748461 | None:intergenic | 35.0% |
| ! | TTTTTAACCTCTCAGTCCAA+AGG | - | chr5.2:7748443-7748462 | None:intergenic | 35.0% |
| !! | CTCAAATTAGCCTTTACCAA+TGG | - | chr5.2:7749722-7749741 | None:intergenic | 35.0% |
| AAATCTCAGAGGTTCCTGTA+AGG | - | chr5.2:7749081-7749100 | None:intergenic | 40.0% | |
| AAGAACAGAGATAGAAAGGG+AGG | + | chr5.2:7748461-7748480 | MS.gene09570:intron | 40.0% | |
| AAGGGAGGATAAAAATGAGG+AGG | + | chr5.2:7748476-7748495 | MS.gene09570:intron | 40.0% | |
| ACTGCAAGACAAACTAAACC+GGG | + | chr5.2:7748140-7748159 | MS.gene09570:CDS | 40.0% | |
| AGACATTAGACACCACATTC+TGG | - | chr5.2:7749351-7749370 | None:intergenic | 40.0% | |
| AGGATGGAATGCTGTATTCA+TGG | + | chr5.2:7748784-7748803 | MS.gene09570:CDS | 40.0% | |
| AGTGTTAAGAGACTAACCTC+GGG | - | chr5.2:7749538-7749557 | None:intergenic | 40.0% | |
| ATACCGGTCTTTGCTCAAAA+GGG | - | chr5.2:7748319-7748338 | None:intergenic | 40.0% | |
| CACATATATTCCTTGTCTCC+AGG | + | chr5.2:7750125-7750144 | MS.gene09570:intron | 40.0% | |
| CTAACTGTCATGCTTTCTGA+TGG | - | chr5.2:7748596-7748615 | None:intergenic | 40.0% | |
| CTAGCTCGTGATAGATTGTT+GGG | + | chr5.2:7749987-7750006 | MS.gene09570:CDS | 40.0% | |
| CTGAGATTTATACTAGCTGC+TGG | + | chr5.2:7749092-7749111 | MS.gene09570:CDS | 40.0% | |
| GAAGAAAGTGGATGGTATGA+CGG | + | chr5.2:7749493-7749512 | MS.gene09570:CDS | 40.0% | |
| GACCAGTATACTGTAGAGAT+AGG | + | chr5.2:7750489-7750508 | MS.gene09570:CDS | 40.0% | |
| GAGATGAATGGAGAAACAAG+TGG | + | chr5.2:7748251-7748270 | MS.gene09570:CDS | 40.0% | |
| GAGTGTTAAGAGACTAACCT+CGG | - | chr5.2:7749539-7749558 | None:intergenic | 40.0% | |
| GAGTGTTTGTGACTACAGAA+GGG | - | chr5.2:7749318-7749337 | None:intergenic | 40.0% | |
| GATGGAATGCTGTATTCATG+GGG | + | chr5.2:7748786-7748805 | MS.gene09570:CDS | 40.0% | |
| GCAGCTAGTATAAATCTCAG+AGG | - | chr5.2:7749092-7749111 | None:intergenic | 40.0% | |
| GCCATAAAAGGTGAGATGAA+TGG | + | chr5.2:7748239-7748258 | MS.gene09570:CDS | 40.0% | |
| GGATGGAATGCTGTATTCAT+GGG | + | chr5.2:7748785-7748804 | MS.gene09570:CDS | 40.0% | |
| GGGATGTGAACATGAAAAAG+AGG | - | chr5.2:7749179-7749198 | None:intergenic | 40.0% | |
| TAGATTGTTGGGCTCTTACA+AGG | + | chr5.2:7749998-7750017 | MS.gene09570:CDS | 40.0% | |
| TCAGTTTGTATGTGTGTGCA+GGG | - | chr5.2:7748631-7748650 | None:intergenic | 40.0% | |
| TCTATGTTGTTGCCAGAATG+TGG | + | chr5.2:7749336-7749355 | MS.gene09570:intron | 40.0% | |
| TGCTGAAGCAAACTCTAGTT+GGG | + | chr5.2:7750166-7750185 | MS.gene09570:CDS | 40.0% | |
| TTAACTGGATCACAATGCAG+GGG | + | chr5.2:7749425-7749444 | MS.gene09570:intron | 40.0% | |
| TTCAGTTTGTATGTGTGTGC+AGG | - | chr5.2:7748632-7748651 | None:intergenic | 40.0% | |
| TTGCTGAAGCAAACTCTAGT+TGG | + | chr5.2:7750165-7750184 | MS.gene09570:CDS | 40.0% | |
| TTTATACTAGCTGCTGGAAC+AGG | + | chr5.2:7749098-7749117 | MS.gene09570:CDS | 40.0% | |
| TTTGGATGATGAACGAACCA+TGG | - | chr5.2:7748172-7748191 | None:intergenic | 40.0% | |
| ! | AGAGTGTTTGTGACTACAGA+AGG | - | chr5.2:7749319-7749338 | None:intergenic | 40.0% |
| ! | CTGTGTTGATGTTACCTTAC+AGG | + | chr5.2:7749064-7749083 | MS.gene09570:intron | 40.0% |
| ! | GAGTACTCATCTTTGAAGGA+TGG | + | chr5.2:7748768-7748787 | MS.gene09570:CDS | 40.0% |
| ! | TTTTATCGAGCATTAGCAGG+AGG | + | chr5.2:7750512-7750531 | MS.gene09570:CDS | 40.0% |
| !! | AGGTTTTATCGAGCATTAGC+AGG | + | chr5.2:7750509-7750528 | MS.gene09570:CDS | 40.0% |
| !! | GGTTTAGTTTGTCTTGCAGT+TGG | - | chr5.2:7748140-7748159 | None:intergenic | 40.0% |
| AAGCAAACTCTAGTTGGGAC+TGG | + | chr5.2:7750171-7750190 | MS.gene09570:CDS | 45.0% | |
| ATTGCCTGCAGATGTGAAAG+CGG | + | chr5.2:7750424-7750443 | MS.gene09570:CDS | 45.0% | |
| CATACCGGTCTTTGCTCAAA+AGG | - | chr5.2:7748320-7748339 | None:intergenic | 45.0% | |
| CCAACAATCTATCACGAGCT+AGG | - | chr5.2:7749989-7750008 | None:intergenic | 45.0% | |
| CCTAGCTCGTGATAGATTGT+TGG | + | chr5.2:7749986-7750005 | MS.gene09570:CDS | 45.0% | |
| CCTGCGCAAAACCATATTCA+AGG | + | chr5.2:7749616-7749635 | MS.gene09570:intron | 45.0% | |
| CTAAAGCTTGCAGCTGCAAT+TGG | - | chr5.2:7748885-7748904 | None:intergenic | 45.0% | |
| CTGTATTCATGGGGAGAACT+GGG | + | chr5.2:7748795-7748814 | MS.gene09570:CDS | 45.0% | |
| GAAACAAGTGGATCTTCAGG+AGG | + | chr5.2:7748263-7748282 | MS.gene09570:CDS | 45.0% | |
| GATATTCCCTTTGGACTGAG+AGG | + | chr5.2:7748433-7748452 | MS.gene09570:intron | 45.0% | |
| GGAGAAACAAGTGGATCTTC+AGG | + | chr5.2:7748260-7748279 | MS.gene09570:CDS | 45.0% | |
| GGGACTTCAATTTCCAATCC+AGG | - | chr5.2:7748299-7748318 | None:intergenic | 45.0% | |
| GTTGACCTTGGGAACTTGAA+CGG | - | chr5.2:7750292-7750311 | None:intergenic | 45.0% | |
| TGTCATGCTTTCTGATGGCT+TGG | - | chr5.2:7748591-7748610 | None:intergenic | 45.0% | |
| TTCACTGGGACATAGCAAGT+AGG | + | chr5.2:7749645-7749664 | MS.gene09570:intron | 45.0% | |
| ! | ACTGGTTTAACCTGGAGACA+AGG | - | chr5.2:7750138-7750157 | None:intergenic | 45.0% |
| ! | AGTCCCTTTTGAGCAAAGAC+CGG | + | chr5.2:7748313-7748332 | MS.gene09570:CDS | 45.0% |
| ! | ATCAACCGTTCAAGTTCCCA+AGG | + | chr5.2:7750284-7750303 | MS.gene09570:CDS | 45.0% |
| !! | ATGGTATGACGGACAGATGT+GGG | + | chr5.2:7749504-7749523 | MS.gene09570:CDS | 45.0% |
| !! | CCTTGAATATGGTTTTGCGC+AGG | - | chr5.2:7749619-7749638 | None:intergenic | 45.0% |
| AACGAACCATGGTTGCTTCC+CGG | - | chr5.2:7748161-7748180 | None:intergenic | 50.0% | |
| ACTAAACCGGGAAGCAACCA+TGG | + | chr5.2:7748152-7748171 | MS.gene09570:CDS | 50.0% | |
| AGGAGGCCAGTACTGCAAAT+GGG | + | chr5.2:7750529-7750548 | MS.gene09570:CDS | 50.0% | |
| ATGCAGGGGTGGAGTTATGT+TGG | + | chr5.2:7749439-7749458 | MS.gene09570:intron | 50.0% | |
| GATCCTCCCATTTGCAGTAC+TGG | - | chr5.2:7750538-7750557 | None:intergenic | 50.0% | |
| GCTGTATTCATGGGGAGAAC+TGG | + | chr5.2:7748794-7748813 | MS.gene09570:CDS | 50.0% | |
| GTTAAGAGACTAACCTCGGG+CGG | - | chr5.2:7749535-7749554 | None:intergenic | 50.0% | |
| TACAGAAGGGAGTTCCCACT+AGG | - | chr5.2:7749305-7749324 | None:intergenic | 50.0% | |
| TCGTTCTTTCTTCGCCTTGG+AGG | + | chr5.2:7748825-7748844 | MS.gene09570:CDS | 50.0% | |
| TGGATCTTCAGGAGGTAGCT+GGG | + | chr5.2:7748271-7748290 | MS.gene09570:CDS | 50.0% | |
| TTGGCAGTGTTCACAGTGCT+TGG | + | chr5.2:7748855-7748874 | MS.gene09570:CDS | 50.0% | |
| !! | ACTGGAGCATTGCTTGTCAC+TGG | + | chr5.2:7750189-7750208 | MS.gene09570:CDS | 50.0% |
| !! | GATGGTATGACGGACAGATG+TGG | + | chr5.2:7749503-7749522 | MS.gene09570:CDS | 50.0% |
| ACTGGATCACAATGCAGGGG+TGG | + | chr5.2:7749428-7749447 | MS.gene09570:intron | 55.0% | |
| AGGCCAGTACTGCAAATGGG+AGG | + | chr5.2:7750532-7750551 | MS.gene09570:CDS | 55.0% | |
| AGGCGAAGAAAGAACGACCC+TGG | - | chr5.2:7748822-7748841 | None:intergenic | 55.0% | |
| AGGTAGCTGGGATCCTGGAT+TGG | + | chr5.2:7748283-7748302 | MS.gene09570:CDS | 55.0% | |
| CAGGAGGCCAGTACTGCAAA+TGG | + | chr5.2:7750528-7750547 | MS.gene09570:CDS | 55.0% | |
| GCGCAGGTGAAGTCTTCAGA+GGG | - | chr5.2:7749603-7749622 | None:intergenic | 55.0% | |
| GGGTCGTTCTTTCTTCGCCT+TGG | + | chr5.2:7748822-7748841 | MS.gene09570:CDS | 55.0% | |
| GTGGATCTTCAGGAGGTAGC+TGG | + | chr5.2:7748270-7748289 | MS.gene09570:CDS | 55.0% | |
| TCGTCCGCTTTCACATCTGC+AGG | - | chr5.2:7750431-7750450 | None:intergenic | 55.0% | |
| TGCGCAGGTGAAGTCTTCAG+AGG | - | chr5.2:7749604-7749623 | None:intergenic | 55.0% | |
| TTCTTCGCCTTGGAGGTCTC+TGG | + | chr5.2:7748832-7748851 | MS.gene09570:CDS | 55.0% | |
| CATGGGGAGAACTGGGTCCA+GGG | + | chr5.2:7748802-7748821 | MS.gene09570:CDS | 60.0% | |
| CTGCCAACCAGAGACCTCCA+AGG | - | chr5.2:7748842-7748861 | None:intergenic | 60.0% | |
| TCAGGAGGTAGCTGGGATCC+TGG | + | chr5.2:7748278-7748297 | MS.gene09570:CDS | 60.0% | |
| TCATGGGGAGAACTGGGTCC+AGG | + | chr5.2:7748801-7748820 | MS.gene09570:CDS | 60.0% | |
| TCGCCTTGGAGGTCTCTGGT+TGG | + | chr5.2:7748836-7748855 | MS.gene09570:CDS | 60.0% | |
| TCTTGCAGCTGCTGCTGCTG+AGG | + | chr5.2:7750454-7750473 | MS.gene09570:CDS | 60.0% | |
| TGGGGATCATGGGGTGAGCA+AGG | + | chr5.2:7749213-7749232 | MS.gene09570:intron | 60.0% | |
| GCTGCTGCTGAGGCTGCAGA+TGG | + | chr5.2:7750464-7750483 | MS.gene09570:CDS | 65.0% | |
| GATGTGGGTCAAGCCGCCCG+AGG | + | chr5.2:7749519-7749538 | MS.gene09570:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 7748104 | 7750568 | 7748104 | ID=MS.gene09570 |
| chr5.2 | mRNA | 7748104 | 7750568 | 7748104 | ID=MS.gene09570.t1;Parent=MS.gene09570 |
| chr5.2 | exon | 7748104 | 7748334 | 7748104 | ID=MS.gene09570.t1.exon1;Parent=MS.gene09570.t1 |
| chr5.2 | CDS | 7748104 | 7748334 | 7748104 | ID=cds.MS.gene09570.t1;Parent=MS.gene09570.t1 |
| chr5.2 | exon | 7748762 | 7748914 | 7748762 | ID=MS.gene09570.t1.exon2;Parent=MS.gene09570.t1 |
| chr5.2 | CDS | 7748762 | 7748914 | 7748762 | ID=cds.MS.gene09570.t1;Parent=MS.gene09570.t1 |
| chr5.2 | exon | 7749086 | 7749163 | 7749086 | ID=MS.gene09570.t1.exon3;Parent=MS.gene09570.t1 |
| chr5.2 | CDS | 7749086 | 7749163 | 7749086 | ID=cds.MS.gene09570.t1;Parent=MS.gene09570.t1 |
| chr5.2 | exon | 7749445 | 7749540 | 7749445 | ID=MS.gene09570.t1.exon4;Parent=MS.gene09570.t1 |
| chr5.2 | CDS | 7749445 | 7749540 | 7749445 | ID=cds.MS.gene09570.t1;Parent=MS.gene09570.t1 |
| chr5.2 | exon | 7749984 | 7750019 | 7749984 | ID=MS.gene09570.t1.exon5;Parent=MS.gene09570.t1 |
| chr5.2 | CDS | 7749984 | 7750019 | 7749984 | ID=cds.MS.gene09570.t1;Parent=MS.gene09570.t1 |
| chr5.2 | exon | 7750147 | 7750328 | 7750147 | ID=MS.gene09570.t1.exon6;Parent=MS.gene09570.t1 |
| chr5.2 | CDS | 7750147 | 7750328 | 7750147 | ID=cds.MS.gene09570.t1;Parent=MS.gene09570.t1 |
| chr5.2 | exon | 7750406 | 7750568 | 7750406 | ID=MS.gene09570.t1.exon7;Parent=MS.gene09570.t1 |
| chr5.2 | CDS | 7750406 | 7750568 | 7750406 | ID=cds.MS.gene09570.t1;Parent=MS.gene09570.t1 |
| Gene Sequence |
| Protein sequence |
