Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52776.t1 | XP_013462263.1 | 98 | 205 | 4 | 0 | 88 | 292 | 129 | 333 | 1.90E-104 | 389 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52776.t1 | A0A072V4M6 | 98.0 | 205 | 4 | 0 | 88 | 292 | 129 | 333 | 1.4e-104 | 389.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene52776 | 0.822687 | 2.07E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene52776 | 0.832341 | 9.99E-56 | -1.69E-46 |
| MS.gene049173 | MS.gene52776 | 0.816129 | 6.48E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene52776 | 0.845927 | 2.99E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene52776 | 0.857867 | 1.22E-62 | -1.69E-46 |
| MS.gene049285 | MS.gene52776 | 0.813198 | 2.89E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene52776 | 0.833942 | 3.99E-56 | -1.69E-46 |
| MS.gene049369 | MS.gene52776 | 0.829138 | 6.09E-55 | -1.69E-46 |
| MS.gene049396 | MS.gene52776 | 0.812661 | 3.79E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene52776 | 0.819477 | 1.14E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene52776 | 0.873567 | 1.33E-67 | -1.69E-46 |
| MS.gene049633 | MS.gene52776 | 0.837203 | 5.97E-57 | -1.69E-46 |
| MS.gene049794 | MS.gene52776 | 0.828046 | 1.12E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene52776 | 0.828273 | 9.85E-55 | -1.69E-46 |
| MS.gene050499 | MS.gene52776 | 0.826895 | 2.11E-54 | -1.69E-46 |
| MS.gene050520 | MS.gene52776 | 0.80484 | 1.78E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene52776 | 0.849453 | 3.20E-60 | -1.69E-46 |
| MS.gene050593 | MS.gene52776 | 0.841522 | 4.52E-58 | -1.69E-46 |
| MS.gene050625 | MS.gene52776 | 0.828332 | 9.53E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene52776 | 0.831985 | 1.22E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene52776 | 0.810342 | 1.21E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene52776 | 0.88196 | 1.55E-70 | -1.69E-46 |
| MS.gene050772 | MS.gene52776 | 0.869832 | 2.30E-66 | -1.69E-46 |
| MS.gene05080 | MS.gene52776 | 0.846574 | 1.99E-59 | -1.69E-46 |
| MS.gene05081 | MS.gene52776 | 0.835008 | 2.15E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene52776 | 0.822682 | 2.08E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene52776 | 0.822871 | 1.88E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene52776 | 0.874027 | 9.31E-68 | -1.69E-46 |
| MS.gene05105 | MS.gene52776 | 0.864503 | 1.16E-64 | -1.69E-46 |
| MS.gene051255 | MS.gene52776 | 0.813591 | 2.37E-51 | -1.69E-46 |
| MS.gene051360 | MS.gene52776 | 0.853909 | 1.75E-61 | -1.69E-46 |
| MS.gene051387 | MS.gene52776 | 0.850004 | 2.25E-60 | -1.69E-46 |
| MS.gene051525 | MS.gene52776 | 0.828031 | 1.13E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene52776 | 0.849547 | 3.02E-60 | -1.69E-46 |
| MS.gene051692 | MS.gene52776 | 0.822262 | 2.60E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene52776 | 0.846738 | 1.80E-59 | -1.69E-46 |
| MS.gene051734 | MS.gene52776 | 0.843973 | 1.01E-58 | -1.69E-46 |
| MS.gene051838 | MS.gene52776 | 0.861681 | 8.65E-64 | -1.69E-46 |
| MS.gene051858 | MS.gene52776 | 0.87271 | 2.58E-67 | -1.69E-46 |
| MS.gene051874 | MS.gene52776 | 0.819692 | 1.02E-52 | -1.69E-46 |
| MS.gene052136 | MS.gene52776 | 0.820301 | 7.37E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene52776 | 0.839109 | 1.93E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene52776 | 0.816216 | 6.20E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene52776 | 0.819617 | 1.06E-52 | -1.69E-46 |
| MS.gene052322 | MS.gene52776 | 0.801284 | 9.68E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene52776 | 0.849826 | 2.52E-60 | -1.69E-46 |
| MS.gene052379 | MS.gene52776 | 0.809821 | 1.57E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene52776 | 0.851606 | 7.95E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene52776 | 0.824778 | 6.71E-54 | -1.69E-46 |
| MS.gene052481 | MS.gene52776 | 0.859101 | 5.22E-63 | -1.69E-46 |
| MS.gene052484 | MS.gene52776 | 0.855701 | 5.29E-62 | -1.69E-46 |
| MS.gene052485 | MS.gene52776 | 0.833423 | 5.38E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene52776 | 0.846251 | 2.44E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene52776 | 0.836025 | 1.19E-56 | -1.69E-46 |
| MS.gene052505 | MS.gene52776 | 0.839541 | 1.49E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene52776 | 0.84849 | 5.93E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene52776 | 0.825213 | 5.30E-54 | -1.69E-46 |
| MS.gene052825 | MS.gene52776 | 0.827289 | 1.70E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene52776 | 0.837873 | 4.02E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene52776 | 0.835848 | 1.32E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene52776 | 0.853996 | 1.65E-61 | -1.69E-46 |
| MS.gene052982 | MS.gene52776 | 0.862437 | 5.07E-64 | -1.69E-46 |
| MS.gene052999 | MS.gene52776 | 0.811198 | 7.89E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene52776 | 0.81274 | 3.64E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene52776 | 0.826167 | 3.15E-54 | -1.69E-46 |
| MS.gene053107 | MS.gene52776 | 0.80375 | 3.00E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene52776 | 0.826721 | 2.32E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene52776 | 0.854094 | 1.55E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene52776 | 0.818035 | 2.42E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene52776 | 0.833739 | 4.49E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene52776 | 0.82613 | 3.21E-54 | -1.69E-46 |
| MS.gene053318 | MS.gene52776 | 0.826264 | 2.98E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene52776 | 0.82291 | 1.84E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene52776 | 0.832346 | 9.96E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene52776 | 0.810872 | 9.29E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene52776 | 0.868659 | 5.54E-66 | -1.69E-46 |
| MS.gene053626 | MS.gene52776 | 0.836763 | 7.73E-57 | -1.69E-46 |
| MS.gene053632 | MS.gene52776 | 0.836483 | 9.11E-57 | -1.69E-46 |
| MS.gene053758 | MS.gene52776 | 0.802702 | 4.95E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene52776 | 0.855295 | 6.94E-62 | -1.69E-46 |
| MS.gene053912 | MS.gene52776 | 0.84137 | 4.95E-58 | -1.69E-46 |
| MS.gene054003 | MS.gene52776 | 0.803138 | 4.02E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene52776 | 0.839662 | 1.39E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene52776 | 0.815177 | 1.06E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene52776 | 0.850761 | 1.38E-60 | -1.69E-46 |
| MS.gene054642 | MS.gene52776 | 0.811865 | 5.65E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene52776 | 0.866775 | 2.23E-65 | -1.69E-46 |
| MS.gene05494 | MS.gene52776 | 0.853038 | 3.11E-61 | -1.69E-46 |
| MS.gene05505 | MS.gene52776 | 0.843431 | 1.41E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene52776 | 0.80924 | 2.09E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene52776 | 0.850775 | 1.37E-60 | -1.69E-46 |
| MS.gene055224 | MS.gene52776 | 0.817938 | 2.54E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene52776 | 0.836103 | 1.14E-56 | -1.69E-46 |
| MS.gene055362 | MS.gene52776 | 0.814279 | 1.67E-51 | -1.69E-46 |
| MS.gene055412 | MS.gene52776 | 0.806386 | 8.44E-50 | -1.69E-46 |
| MS.gene055486 | MS.gene52776 | 0.80742 | 5.10E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene52776 | 0.822471 | 2.33E-53 | -1.69E-46 |
| MS.gene055539 | MS.gene52776 | 0.809299 | 2.03E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene52776 | 0.859355 | 4.38E-63 | -1.69E-46 |
| MS.gene055647 | MS.gene52776 | 0.800093 | 1.69E-48 | -1.69E-46 |
| MS.gene055722 | MS.gene52776 | 0.88686 | 2.37E-72 | -1.69E-46 |
| MS.gene055741 | MS.gene52776 | 0.83697 | 6.85E-57 | -1.69E-46 |
| MS.gene055744 | MS.gene52776 | 0.835795 | 1.36E-56 | -1.69E-46 |
| MS.gene055893 | MS.gene52776 | 0.803159 | 3.98E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene52776 | 0.821147 | 4.71E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene52776 | 0.83252 | 9.02E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene52776 | 0.8285 | 8.69E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene52776 | 0.856638 | 2.81E-62 | -1.69E-46 |
| MS.gene056040 | MS.gene52776 | 0.804341 | 2.26E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene52776 | 0.819326 | 1.23E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene52776 | 0.879413 | 1.27E-69 | -1.69E-46 |
| MS.gene056409 | MS.gene52776 | 0.817356 | 3.44E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene52776 | 0.809275 | 2.05E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene52776 | 0.820954 | 5.22E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene52776 | 0.829908 | 3.96E-55 | -1.69E-46 |
| MS.gene056449 | MS.gene52776 | 0.813134 | 2.99E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene52776 | 0.804748 | 1.86E-49 | -1.69E-46 |
| MS.gene056510 | MS.gene52776 | 0.812846 | 3.45E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene52776 | 0.844918 | 5.61E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene52776 | 0.800433 | 1.44E-48 | -1.69E-46 |
| MS.gene056610 | MS.gene52776 | 0.813215 | 2.87E-51 | -1.69E-46 |
| MS.gene05664 | MS.gene52776 | 0.814984 | 1.17E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene52776 | 0.802136 | 6.48E-49 | -1.69E-46 |
| MS.gene05666 | MS.gene52776 | 0.827029 | 1.96E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene52776 | 0.806123 | 9.58E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene52776 | 0.821237 | 4.49E-53 | -1.69E-46 |
| MS.gene056897 | MS.gene52776 | 0.81003 | 1.41E-50 | -1.69E-46 |
| MS.gene056946 | MS.gene52776 | 0.836077 | 1.16E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene52776 | 0.803569 | 3.27E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene52776 | 0.85471 | 1.03E-61 | -1.69E-46 |
| MS.gene057124 | MS.gene52776 | 0.810239 | 1.27E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene52776 | 0.839646 | 1.40E-57 | -1.69E-46 |
| MS.gene057289 | MS.gene52776 | 0.830223 | 3.31E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene52776 | 0.834612 | 2.71E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene52776 | 0.833907 | 4.07E-56 | -1.69E-46 |
| MS.gene057658 | MS.gene52776 | 0.829706 | 4.43E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene52776 | 0.850901 | 1.26E-60 | -1.69E-46 |
| MS.gene057749 | MS.gene52776 | 0.81128 | 7.58E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene52776 | 0.820752 | 5.81E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene52776 | 0.832623 | 8.50E-56 | -1.69E-46 |
| MS.gene057856 | MS.gene52776 | 0.834508 | 2.88E-56 | -1.69E-46 |
| MS.gene057857 | MS.gene52776 | 0.808319 | 3.28E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene52776 | 0.800625 | 1.32E-48 | -1.69E-46 |
| MS.gene058007 | MS.gene52776 | 0.813788 | 2.14E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene52776 | 0.821933 | 3.10E-53 | -1.69E-46 |
| MS.gene058120 | MS.gene52776 | 0.862373 | 5.31E-64 | -1.69E-46 |
| MS.gene058130 | MS.gene52776 | 0.855422 | 6.38E-62 | -1.69E-46 |
| MS.gene058338 | MS.gene52776 | 0.840358 | 9.12E-58 | -1.69E-46 |
| MS.gene058376 | MS.gene52776 | 0.83576 | 1.39E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene52776 | 0.853102 | 2.98E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene52776 | 0.819718 | 1.00E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene52776 | 0.859748 | 3.34E-63 | -1.69E-46 |
| MS.gene058544 | MS.gene52776 | 0.811081 | 8.37E-51 | -1.69E-46 |
| MS.gene058700 | MS.gene52776 | 0.853501 | 2.29E-61 | -1.69E-46 |
| MS.gene058773 | MS.gene52776 | 0.832046 | 1.18E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene52776 | 0.843211 | 1.61E-58 | -1.69E-46 |
| MS.gene05883 | MS.gene52776 | 0.833782 | 4.38E-56 | -1.69E-46 |
| MS.gene058948 | MS.gene52776 | 0.865498 | 5.66E-65 | -1.69E-46 |
| MS.gene059022 | MS.gene52776 | 0.80501 | 1.64E-49 | -1.69E-46 |
| MS.gene059023 | MS.gene52776 | 0.859307 | 4.53E-63 | -1.69E-46 |
| MS.gene059029 | MS.gene52776 | 0.805388 | 1.37E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene52776 | 0.833154 | 6.28E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene52776 | 0.83467 | 2.62E-56 | -1.69E-46 |
| MS.gene059366 | MS.gene52776 | 0.806988 | 6.30E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene52776 | 0.813386 | 2.63E-51 | -1.69E-46 |
| MS.gene059368 | MS.gene52776 | 0.818468 | 1.93E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene52776 | 0.822676 | 2.09E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene52776 | 0.840583 | 7.97E-58 | -1.69E-46 |
| MS.gene059667 | MS.gene52776 | 0.811709 | 6.11E-51 | -1.69E-46 |
| MS.gene059674 | MS.gene52776 | 0.802942 | 4.42E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene52776 | 0.806652 | 7.41E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene52776 | 0.803336 | 3.66E-49 | -1.69E-46 |
| MS.gene059680 | MS.gene52776 | 0.806661 | 7.38E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene52776 | 0.84429 | 8.28E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene52776 | 0.828856 | 7.12E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene52776 | 0.830383 | 3.03E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene52776 | 0.825009 | 5.92E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene52776 | 0.854608 | 1.10E-61 | -1.69E-46 |
| MS.gene059801 | MS.gene52776 | 0.845099 | 5.01E-59 | -1.69E-46 |
| MS.gene05986 | MS.gene52776 | 0.819749 | 9.86E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene52776 | 0.867778 | 1.06E-65 | -1.69E-46 |
| MS.gene060372 | MS.gene52776 | 0.804469 | 2.13E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene52776 | 0.820848 | 5.52E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene52776 | 0.805321 | 1.41E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene52776 | 0.830996 | 2.14E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene52776 | 0.845704 | 3.44E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene52776 | 0.812565 | 3.98E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene52776 | 0.834739 | 2.52E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene52776 | 0.831511 | 1.60E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene52776 | 0.843298 | 1.53E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene52776 | 0.894405 | 2.54E-75 | -1.69E-46 |
| MS.gene06092 | MS.gene52776 | 0.850464 | 1.67E-60 | -1.69E-46 |
| MS.gene06097 | MS.gene52776 | 0.802953 | 4.39E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene52776 | 0.803312 | 3.70E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene52776 | 0.80361 | 3.21E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene52776 | 0.820593 | 6.32E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene52776 | 0.814514 | 1.48E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene52776 | 0.808311 | 3.30E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52776.t1 | MTR_3g115240 | 96.209 | 211 | 6 | 1 | 82 | 292 | 125 | 333 | 7.36e-146 | 413 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52776.t1 | AT1G63610 | 81.863 | 204 | 36 | 1 | 88 | 290 | 135 | 338 | 5.18e-110 | 322 |
| MS.gene52776.t1 | AT1G63610 | 81.148 | 122 | 22 | 1 | 88 | 208 | 135 | 256 | 6.48e-56 | 181 |
| MS.gene52776.t1 | AT1G63610 | 79.167 | 48 | 10 | 0 | 88 | 135 | 135 | 182 | 1.49e-18 | 82.0 |
| MS.gene52776.t1 | AT2G14910 | 25.207 | 242 | 124 | 6 | 94 | 278 | 133 | 374 | 9.21e-12 | 65.5 |
| MS.gene52776.t1 | AT5G14970 | 23.874 | 222 | 128 | 5 | 96 | 278 | 134 | 353 | 3.10e-11 | 63.5 |
Find 60 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCGTGCAGCCGGAATTTA+TGG | 0.149781 | 3.1:+91200594 | MS.gene52776:CDS |
| AACTTGGAAAACTGCTTTAT+TGG | 0.187386 | 3.1:+91203379 | MS.gene52776:CDS |
| CAGAGTGCCGTTAGGGGATT+TGG | 0.219495 | 3.1:-91200298 | None:intergenic |
| TCCGAGGCTCAAGAGATTTC+AGG | 0.291456 | 3.1:-91202144 | None:intergenic |
| GGCAATTCAGCCAGCTTTGC+AGG | 0.291964 | 3.1:-91203471 | None:intergenic |
| TCCGGACGTGCAAGATAAAA+AGG | 0.320165 | 3.1:+91201616 | MS.gene52776:CDS |
| TTTGGAACTGCAAGAAAGTT+TGG | 0.323667 | 3.1:+91201580 | MS.gene52776:CDS |
| ATTAGGTGGAACAACATTTC+TGG | 0.347794 | 3.1:+91202007 | MS.gene52776:CDS |
| GGGACACAAAAGAATGTTTC+AGG | 0.353665 | 3.1:+91201977 | MS.gene52776:CDS |
| ATGTTTCAGGTGAAGTCATT+AGG | 0.366658 | 3.1:+91201990 | MS.gene52776:CDS |
| ACAAACAATTCCATAAATTC+CGG | 0.373472 | 3.1:-91200604 | None:intergenic |
| TGTGTCCCAGGTGCATAGTC+TGG | 0.375806 | 3.1:-91201962 | None:intergenic |
| GAGCAGAAGAGAAATCTTAC+TGG | 0.381488 | 3.1:+91200561 | MS.gene52776:CDS |
| TTTGGAACAAGTTGCCCTTC+CGG | 0.390092 | 3.1:+91201598 | MS.gene52776:CDS |
| AAAACTGCTTTATTGGTTGA+TGG | 0.399137 | 3.1:+91203386 | MS.gene52776:CDS |
| CTTTATTGGTTGATGGTGGT+TGG | 0.401910 | 3.1:+91203393 | MS.gene52776:CDS |
| TAGAAATGCACAATACCGTT+TGG | 0.412122 | 3.1:+91201562 | MS.gene52776:CDS |
| GACTAACCGCAGAGAAAGTT+GGG | 0.444012 | 3.1:-91200994 | None:intergenic |
| GAGACTAGTGCATCCGAACT+TGG | 0.446534 | 3.1:+91203363 | MS.gene52776:CDS |
| TTTATTGGTTGATGGTGGTT+GGG | 0.446688 | 3.1:+91203394 | MS.gene52776:CDS |
| TCTTGAGCCTCGGAATTTGA+AGG | 0.450089 | 3.1:+91202153 | MS.gene52776:CDS |
| CATTTCTGGACCTGAGAGAA+TGG | 0.452153 | 3.1:+91202021 | MS.gene52776:CDS |
| ACTTGGAACTCCTGCAAAGC+TGG | 0.466951 | 3.1:+91203461 | MS.gene52776:CDS |
| CATAAGCTGTGCAAGGTTCT+CGG | 0.467098 | 3.1:-91201510 | None:intergenic |
| AAAAGTACCAGAGTGCCGTT+AGG | 0.471684 | 3.1:-91200306 | None:intergenic |
| CAATGCACAAAATGAACTGT+TGG | 0.481591 | 3.1:+91202117 | MS.gene52776:CDS |
| AGACTAACCGCAGAGAAAGT+TGG | 0.484814 | 3.1:-91200995 | None:intergenic |
| AACTTTCTTGCAGTTCCAAA+CGG | 0.487921 | 3.1:-91201577 | None:intergenic |
| TGCAGATCCTACTCAAATGA+AGG | 0.495494 | 3.1:+91202633 | MS.gene52776:CDS |
| CAGACGGTGACAAATATGAT+TGG | 0.500013 | 3.1:+91200790 | MS.gene52776:CDS |
| AAGCTGGCTGAATTGCCGCC+AGG | 0.504319 | 3.1:+91203477 | MS.gene52776:CDS |
| TAGGATTTAACTAGTAGTGC+TGG | 0.507226 | 3.1:+91202559 | MS.gene52776:intron |
| TACATTTATAAAGCGCCTAC+TGG | 0.507895 | 3.1:+91202606 | MS.gene52776:CDS |
| AAAGTACCAGAGTGCCGTTA+GGG | 0.507908 | 3.1:-91200305 | None:intergenic |
| GGTTATGATAGCTAATCTCT+TGG | 0.509354 | 3.1:+91200937 | MS.gene52776:CDS |
| ACCTGAAATCTCTTGAGCCT+CGG | 0.512343 | 3.1:+91202143 | MS.gene52776:CDS |
| CATTGAAGTTCGTTATGACA+TGG | 0.518591 | 3.1:+91203431 | MS.gene52776:CDS |
| TATGACATGGAAAGAGTACT+TGG | 0.520400 | 3.1:+91203444 | MS.gene52776:CDS |
| GATAGGCAGTTTCTACATGC+TGG | 0.521820 | 3.1:+91200916 | MS.gene52776:intron |
| CAAATCCCCTAACGGCACTC+TGG | 0.539235 | 3.1:+91200299 | MS.gene52776:CDS |
| GATATTCCAGACTATGCACC+TGG | 0.544069 | 3.1:+91201956 | MS.gene52776:CDS |
| ATGTACAGTGTCATGATGAC+TGG | 0.544482 | 3.1:+91201530 | MS.gene52776:CDS |
| GTATGTCAAGACCGTGCAGC+CGG | 0.545800 | 3.1:+91200585 | MS.gene52776:CDS |
| GAGGAGTTAAATCGTCAAGT+TGG | 0.554733 | 3.1:+91202082 | MS.gene52776:CDS |
| TTCCATAAATTCCGGCTGCA+CGG | 0.558125 | 3.1:-91200596 | None:intergenic |
| AGGCAAACCTTCATTTGAGT+AGG | 0.567766 | 3.1:-91202640 | None:intergenic |
| TTTAACTAGTAGTGCTGGAG+AGG | 0.582109 | 3.1:+91202564 | MS.gene52776:CDS |
| GTACATTGAAATACTTGAAG+CGG | 0.584560 | 3.1:+91202054 | MS.gene52776:CDS |
| TTTATCTTGCACGTCCGGAA+GGG | 0.586926 | 3.1:-91201612 | None:intergenic |
| CACTGTACATAAGCTGTGCA+AGG | 0.614814 | 3.1:-91201517 | None:intergenic |
| TTTCAGGTGAAGTCATTAGG+TGG | 0.620061 | 3.1:+91201993 | MS.gene52776:CDS |
| AAATCAACCTTCAAATTCCG+AGG | 0.621737 | 3.1:-91202160 | None:intergenic |
| ACTGCTTTATTGGTTGATGG+TGG | 0.623526 | 3.1:+91203389 | MS.gene52776:CDS |
| AATACTTGAAGCGGAGATCG+AGG | 0.627103 | 3.1:+91202063 | MS.gene52776:CDS |
| TAGGATCTGCAACAGCCAGT+AGG | 0.630746 | 3.1:-91202621 | None:intergenic |
| GGTGAATCCAAATCCCCTAA+CGG | 0.646624 | 3.1:+91200291 | MS.gene52776:CDS |
| TTATTTCCCAACTTTCTCTG+CGG | 0.646854 | 3.1:+91200988 | MS.gene52776:CDS |
| AAGTACCAGAGTGCCGTTAG+GGG | 0.671487 | 3.1:-91200304 | None:intergenic |
| TGTGGATGCTATGAGACAGA+CGG | 0.739945 | 3.1:+91200774 | MS.gene52776:CDS |
| ATATTCCAGACTATGCACCT+GGG | 0.741358 | 3.1:+91201957 | MS.gene52776:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATCTTACAATATTGT+AGG | + | chr3.1:91201934-91201953 | MS.gene52776:intron | 15.0% |
| !! | ATCATTAAATCATAAAACAA+CGG | - | chr3.1:91200899-91200918 | None:intergenic | 15.0% |
| !! | ATTGTTATAGAAAAAAATTG+AGG | - | chr3.1:91200826-91200845 | None:intergenic | 15.0% |
| !! | ATTTCTTTCTGTTATTAATT+AGG | + | chr3.1:91200750-91200769 | MS.gene52776:intron | 15.0% |
| !! | GATGTTTGTATTTATTATTT+AGG | - | chr3.1:91201295-91201314 | None:intergenic | 15.0% |
| !! | TTGTTATAGAAAAAAATTGA+GGG | - | chr3.1:91200825-91200844 | None:intergenic | 15.0% |
| !!! | ATTTCTTCAAATTGATTTAT+GGG | + | chr3.1:91203216-91203235 | MS.gene52776:intron | 15.0% |
| !!! | TTAATTTTCTCCTTAAATTA+AGG | + | chr3.1:91202979-91202998 | MS.gene52776:intron | 15.0% |
| !!! | TTGTTTTATGATTTAATGAT+AGG | + | chr3.1:91200899-91200918 | MS.gene52776:intron | 15.0% |
| !! | AATGTTAACCCAAATAATAA+TGG | - | chr3.1:91202779-91202798 | None:intergenic | 20.0% |
| !! | AATTTAAGAACATTGTTTGT+TGG | + | chr3.1:91202494-91202513 | MS.gene52776:intron | 20.0% |
| !! | ACCTGAATAAAAAAACAAAA+TGG | - | chr3.1:91201488-91201507 | None:intergenic | 20.0% |
| !! | AGTCTATAAAAAATCAGAAT+TGG | - | chr3.1:91203334-91203353 | None:intergenic | 20.0% |
| !! | GTTAACATTGAATTTAATGT+TGG | + | chr3.1:91202790-91202809 | MS.gene52776:intron | 20.0% |
| !! | TAAGATAGGAAACTAAATAT+TGG | + | chr3.1:91203067-91203086 | MS.gene52776:intron | 20.0% |
| !! | TCATATCATATCATGTAAAT+AGG | - | chr3.1:91201253-91201272 | None:intergenic | 20.0% |
| !! | TGTTATAGAAAAAAATTGAG+GGG | - | chr3.1:91200824-91200843 | None:intergenic | 20.0% |
| !! | TTGTTACAATGGAAAATAAA+AGG | + | chr3.1:91203008-91203027 | MS.gene52776:intron | 20.0% |
| !!! | ACAATTTTCTCCTTAATTTA+AGG | - | chr3.1:91202992-91203011 | None:intergenic | 20.0% |
| !!! | ACCATTTTGTTTTTTTATTC+AGG | + | chr3.1:91201484-91201503 | MS.gene52776:intron | 20.0% |
| !!! | CTTTTTTATTAAATGAGGAA+AGG | - | chr3.1:91203150-91203169 | None:intergenic | 20.0% |
| !!! | GATTTCTTCAAATTGATTTA+TGG | + | chr3.1:91203215-91203234 | MS.gene52776:intron | 20.0% |
| !!! | GTTGGAATTGTATTATTTTT+AGG | + | chr3.1:91202808-91202827 | MS.gene52776:intron | 20.0% |
| !!! | TGTGATCAATTTTGAAAATA+CGG | + | chr3.1:91202289-91202308 | MS.gene52776:intron | 20.0% |
| ! | AAAGGCTATTGAAAAACAAT+AGG | + | chr3.1:91202898-91202917 | MS.gene52776:intron | 25.0% |
| ! | AATGAACTTATATCAGTTCT+TGG | - | chr3.1:91201230-91201249 | None:intergenic | 25.0% |
| ! | AATTGCAACTGTAAGATTAT+CGG | + | chr3.1:91200843-91200862 | MS.gene52776:intron | 25.0% |
| ! | AATTTGAAGAAATCTAGTTG+TGG | - | chr3.1:91203209-91203228 | None:intergenic | 25.0% |
| ! | ACAAACAATTCCATAAATTC+CGG | - | chr3.1:91200607-91200626 | None:intergenic | 25.0% |
| ! | ACATAAAACTCTTCATTCTT+AGG | - | chr3.1:91201795-91201814 | None:intergenic | 25.0% |
| ! | GAGATGTAATTCTAGATATT+TGG | - | chr3.1:91202372-91202391 | None:intergenic | 25.0% |
| ! | GTTAAATCCTACATGAAAAA+AGG | - | chr3.1:91202550-91202569 | None:intergenic | 25.0% |
| ! | GTTATAGAAAAAAATTGAGG+GGG | - | chr3.1:91200823-91200842 | None:intergenic | 25.0% |
| ! | TAAGGAGAAAATTGTTACAA+TGG | + | chr3.1:91202997-91203016 | MS.gene52776:intron | 25.0% |
| ! | TAATAGTCTAACTGACTATA+GGG | + | chr3.1:91203175-91203194 | MS.gene52776:intron | 25.0% |
| ! | TCTGTTCACCATTATTATTT+GGG | + | chr3.1:91202768-91202787 | MS.gene52776:intron | 25.0% |
| !! | AAAATTAAACAAGTACCGTA+CGG | - | chr3.1:91201050-91201069 | None:intergenic | 25.0% |
| !! | AGAGAAAGTATAAAGCAAAA+AGG | - | chr3.1:91201441-91201460 | None:intergenic | 25.0% |
| !! | ATTGGAATATTTTCCAATAG+AGG | + | chr3.1:91203085-91203104 | MS.gene52776:intron | 25.0% |
| !! | TATTTAGGATTGCTGTATAT+GGG | - | chr3.1:91201280-91201299 | None:intergenic | 25.0% |
| !! | TGTGTTTTATGTGTTTATCA+TGG | + | chr3.1:91202836-91202855 | MS.gene52776:intron | 25.0% |
| !! | TTATTTAGGATTGCTGTATA+TGG | - | chr3.1:91201281-91201300 | None:intergenic | 25.0% |
| !! | TTCCTATCTTATTGTTTTCT+AGG | - | chr3.1:91203058-91203077 | None:intergenic | 25.0% |
| !! | TTCTGTTATTAATTAGGTTG+TGG | + | chr3.1:91200756-91200775 | MS.gene52776:intron | 25.0% |
| !!! | AGTTTTATGTCTTGTGAATT+TGG | + | chr3.1:91201805-91201824 | MS.gene52776:intron | 25.0% |
| !!! | CAGTGCTTTTTTATTAAATG+AGG | - | chr3.1:91203155-91203174 | None:intergenic | 25.0% |
| !!! | GTGATCAATTTTGAAAATAC+GGG | + | chr3.1:91202290-91202309 | MS.gene52776:intron | 25.0% |
| AAAAACTAGTTGAAGAGAGA+GGG | - | chr3.1:91200875-91200894 | None:intergenic | 30.0% | |
| AACTTGGAAAACTGCTTTAT+TGG | + | chr3.1:91203379-91203398 | MS.gene52776:CDS | 30.0% | |
| AAGTATTTGGATAACTCCTA+GGG | + | chr3.1:91201692-91201711 | MS.gene52776:intron | 30.0% | |
| AATCCTACATGAAAAAAGGA+AGG | - | chr3.1:91202546-91202565 | None:intergenic | 30.0% | |
| AATGATACTACTGACAGTAA+TGG | - | chr3.1:91203289-91203308 | None:intergenic | 30.0% | |
| ACGATAAAACTGTACCAAAA+AGG | + | chr3.1:91201107-91201126 | MS.gene52776:intron | 30.0% | |
| ACTATGTGTGATTGTTTGAT+CGG | + | chr3.1:91203239-91203258 | MS.gene52776:intron | 30.0% | |
| AGAAATCACATTCACTAAGA+TGG | - | chr3.1:91200736-91200755 | None:intergenic | 30.0% | |
| CTCTGTTCACCATTATTATT+TGG | + | chr3.1:91202767-91202786 | MS.gene52776:intron | 30.0% | |
| GTAATAGTCTAACTGACTAT+AGG | + | chr3.1:91203174-91203193 | MS.gene52776:intron | 30.0% | |
| GTACATTGAAATACTTGAAG+CGG | + | chr3.1:91202054-91202073 | MS.gene52776:CDS | 30.0% | |
| TAAAAACTAGTTGAAGAGAG+AGG | - | chr3.1:91200876-91200895 | None:intergenic | 30.0% | |
| TAATGAAGTCTCCTTAAGAA+CGG | - | chr3.1:91202703-91202722 | None:intergenic | 30.0% | |
| TGAAAAAAGGAAGGTTACTA+TGG | - | chr3.1:91202537-91202556 | None:intergenic | 30.0% | |
| TGCCTAGAAAACAATAAGAT+AGG | + | chr3.1:91203053-91203072 | MS.gene52776:intron | 30.0% | |
| ! | AAAACTGCTTTATTGGTTGA+TGG | + | chr3.1:91203386-91203405 | MS.gene52776:CDS | 30.0% |
| ! | AAATTAAACAAGTACCGTAC+GGG | - | chr3.1:91201049-91201068 | None:intergenic | 30.0% |
| ! | ATAAAGCAGTTTTCCAAGTT+CGG | - | chr3.1:91203379-91203398 | None:intergenic | 30.0% |
| ! | ATTTCTCTTCCTTGTCTTTT+TGG | + | chr3.1:91201645-91201664 | MS.gene52776:intron | 30.0% |
| ! | GTTCTTAAATTTTAAGCGCA+GGG | - | chr3.1:91202485-91202504 | None:intergenic | 30.0% |
| ! | GTTTTATGTGTTTATCATGG+AGG | + | chr3.1:91202839-91202858 | MS.gene52776:intron | 30.0% |
| ! | TCAGACGTTATTGAAGTATT+TGG | + | chr3.1:91201679-91201698 | MS.gene52776:intron | 30.0% |
| ! | TGTTCTTAAATTTTAAGCGC+AGG | - | chr3.1:91202486-91202505 | None:intergenic | 30.0% |
| ! | TTGTTGGGTATATTAGTTTC+AGG | + | chr3.1:91201769-91201788 | MS.gene52776:intron | 30.0% |
| ! | TTTCTCTTCCTTGTCTTTTT+GGG | + | chr3.1:91201646-91201665 | MS.gene52776:intron | 30.0% |
| !! | CATAATGTTGCTTTAGCAAT+TGG | - | chr3.1:91201389-91201408 | None:intergenic | 30.0% |
| !!! | TAACCTTCCTTTTTTCATGT+AGG | + | chr3.1:91202540-91202559 | MS.gene52776:intron | 30.0% |
| !!! | TGTAATGACTTTTTTGCTTG+TGG | + | chr3.1:91201335-91201354 | MS.gene52776:intron | 30.0% |
| AAAACCTCATTGCTGCTAAA+TGG | + | chr3.1:91201834-91201853 | MS.gene52776:intron | 35.0% | |
| AAACTGTACCAAAAAGGATG+CGG | + | chr3.1:91201113-91201132 | MS.gene52776:intron | 35.0% | |
| AAATCAACCTTCAAATTCCG+AGG | - | chr3.1:91202163-91202182 | None:intergenic | 35.0% | |
| AACACCATATTAAACCTACC+TGG | - | chr3.1:91202404-91202423 | None:intergenic | 35.0% | |
| AACGTAATTCCCATGGAATA+GGG | + | chr3.1:91200401-91200420 | MS.gene52776:intron | 35.0% | |
| AACTTTCTTGCAGTTCCAAA+CGG | - | chr3.1:91201580-91201599 | None:intergenic | 35.0% | |
| AATAGGGCAAGTGTAGAATA+GGG | + | chr3.1:91200417-91200436 | MS.gene52776:intron | 35.0% | |
| AATCGATCAACTAACAGTGT+CGG | - | chr3.1:91200672-91200691 | None:intergenic | 35.0% | |
| AATGAAGTCTCCTTAAGAAC+GGG | - | chr3.1:91202702-91202721 | None:intergenic | 35.0% | |
| ATAACATGACAACACGTTAC+CGG | - | chr3.1:91200646-91200665 | None:intergenic | 35.0% | |
| ATTAGGTGGAACAACATTTC+TGG | + | chr3.1:91202007-91202026 | MS.gene52776:CDS | 35.0% | |
| CAATGCACAAAATGAACTGT+TGG | + | chr3.1:91202117-91202136 | MS.gene52776:CDS | 35.0% | |
| CACATAATCCCAAAAAGACA+AGG | - | chr3.1:91201657-91201676 | None:intergenic | 35.0% | |
| CATTGAAGTTCGTTATGACA+TGG | + | chr3.1:91203431-91203450 | MS.gene52776:CDS | 35.0% | |
| CTATGTGTGATTGTTTGATC+GGG | + | chr3.1:91203240-91203259 | MS.gene52776:intron | 35.0% | |
| CTCGTCAATTGAGATAGTAA+GGG | - | chr3.1:91203111-91203130 | None:intergenic | 35.0% | |
| CTTTCATGTACTTTCCAATC+AGG | - | chr3.1:91202882-91202901 | None:intergenic | 35.0% | |
| GAACTCTTATGTTACCTGAT+TGG | + | chr3.1:91202865-91202884 | MS.gene52776:intron | 35.0% | |
| GAACTTATATCAGTTCTTGG+TGG | - | chr3.1:91201227-91201246 | None:intergenic | 35.0% | |
| GAAGGCAATTAGAGATATTG+AGG | - | chr3.1:91202663-91202682 | None:intergenic | 35.0% | |
| GGTTATGATAGCTAATCTCT+TGG | + | chr3.1:91200937-91200956 | MS.gene52776:CDS | 35.0% | |
| TAGAAATGCACAATACCGTT+TGG | + | chr3.1:91201562-91201581 | MS.gene52776:CDS | 35.0% | |
| TAGGATTTAACTAGTAGTGC+TGG | + | chr3.1:91202559-91202578 | MS.gene52776:intron | 35.0% | |
| TATGTGTGATTGTTTGATCG+GGG | + | chr3.1:91203241-91203260 | MS.gene52776:intron | 35.0% | |
| TCACACTGAAATAAGAAGCA+TGG | - | chr3.1:91201464-91201483 | None:intergenic | 35.0% | |
| TCACTATAAAAACCAGCCTT+GGG | - | chr3.1:91202951-91202970 | None:intergenic | 35.0% | |
| TCTCGTCAATTGAGATAGTA+AGG | - | chr3.1:91203112-91203131 | None:intergenic | 35.0% | |
| TTATTTCCCAACTTTCTCTG+CGG | + | chr3.1:91200988-91201007 | MS.gene52776:CDS | 35.0% | |
| ! | AAATTTTAAGCGCAGGGAAT+GGG | - | chr3.1:91202479-91202498 | None:intergenic | 35.0% |
| ! | AATTAAACAAGTACCGTACG+GGG | - | chr3.1:91201048-91201067 | None:intergenic | 35.0% |
| ! | ATGGCTGTGACATTTTCTTT+TGG | + | chr3.1:91201853-91201872 | MS.gene52776:intron | 35.0% |
| ! | ATGTTTCAGGTGAAGTCATT+AGG | + | chr3.1:91201990-91202009 | MS.gene52776:CDS | 35.0% |
| ! | CTGATTGGAAAGTACATGAA+AGG | + | chr3.1:91202880-91202899 | MS.gene52776:intron | 35.0% |
| ! | GAAGTATTTGGATAACTCCT+AGG | + | chr3.1:91201691-91201710 | MS.gene52776:intron | 35.0% |
| ! | TAAATTTTAAGCGCAGGGAA+TGG | - | chr3.1:91202480-91202499 | None:intergenic | 35.0% |
| ! | TACAGACTAAAGCATTCACT+TGG | - | chr3.1:91201903-91201922 | None:intergenic | 35.0% |
| ! | TACATTTATAAAGCGCCTAC+TGG | + | chr3.1:91202606-91202625 | MS.gene52776:CDS | 35.0% |
| ! | TTTGGAACTGCAAGAAAGTT+TGG | + | chr3.1:91201580-91201599 | MS.gene52776:CDS | 35.0% |
| !! | TATGACATGGAAAGAGTACT+TGG | + | chr3.1:91203444-91203463 | MS.gene52776:CDS | 35.0% |
| !! | TTTATTGGTTGATGGTGGTT+GGG | + | chr3.1:91203394-91203413 | MS.gene52776:CDS | 35.0% |
| !! | TTTTTAGCATCCATTCTCTC+AGG | - | chr3.1:91202034-91202053 | None:intergenic | 35.0% |
| !!! | CTTGTCTTTTTGGGATTATG+TGG | + | chr3.1:91201655-91201674 | MS.gene52776:intron | 35.0% |
| AACTGTACCAAAAAGGATGC+GGG | + | chr3.1:91201114-91201133 | MS.gene52776:intron | 40.0% | |
| ACTTGTGAACGTAATTCCCA+TGG | + | chr3.1:91200394-91200413 | MS.gene52776:intron | 40.0% | |
| AGCACCAGGTAGGTTTAATA+TGG | + | chr3.1:91202397-91202416 | MS.gene52776:intron | 40.0% | |
| AGGCAAACCTTCATTTGAGT+AGG | - | chr3.1:91202643-91202662 | None:intergenic | 40.0% | |
| AGTAATGGCAAGCAAAGAGA+AGG | - | chr3.1:91203274-91203293 | None:intergenic | 40.0% | |
| ATATTCCAGACTATGCACCT+GGG | + | chr3.1:91201957-91201976 | MS.gene52776:CDS | 40.0% | |
| ATGTACAGTGTCATGATGAC+TGG | + | chr3.1:91201530-91201549 | MS.gene52776:CDS | 40.0% | |
| CAACATTATGCCATCTAGCT+GGG | + | chr3.1:91201399-91201418 | MS.gene52776:intron | 40.0% | |
| CAGACGGTGACAAATATGAT+TGG | + | chr3.1:91200790-91200809 | MS.gene52776:CDS | 40.0% | |
| CTAATTTCCTTTGTGTGTCG+TGG | + | chr3.1:91201722-91201741 | MS.gene52776:intron | 40.0% | |
| CTCACTATAAAAACCAGCCT+TGG | - | chr3.1:91202952-91202971 | None:intergenic | 40.0% | |
| GAACGTAATTCCCATGGAAT+AGG | + | chr3.1:91200400-91200419 | MS.gene52776:intron | 40.0% | |
| GAATAGGGCAAGTGTAGAAT+AGG | + | chr3.1:91200416-91200435 | MS.gene52776:intron | 40.0% | |
| GAGCAGAAGAGAAATCTTAC+TGG | + | chr3.1:91200561-91200580 | MS.gene52776:CDS | 40.0% | |
| GAGGAGTTAAATCGTCAAGT+TGG | + | chr3.1:91202082-91202101 | MS.gene52776:CDS | 40.0% | |
| GGGACACAAAAGAATGTTTC+AGG | + | chr3.1:91201977-91201996 | MS.gene52776:CDS | 40.0% | |
| TGAAGAAATCTAGTTGTGGC+AGG | - | chr3.1:91203205-91203224 | None:intergenic | 40.0% | |
| TGCAGATCCTACTCAAATGA+AGG | + | chr3.1:91202633-91202652 | MS.gene52776:CDS | 40.0% | |
| TTATGTTATTCCTCAGCCCA+AGG | + | chr3.1:91202932-91202951 | MS.gene52776:intron | 40.0% | |
| TTTCTCTTCTGCTCTTTGAC+TGG | - | chr3.1:91200555-91200574 | None:intergenic | 40.0% | |
| ! | ACCTTTTTATCTTGCACGTC+CGG | - | chr3.1:91201620-91201639 | None:intergenic | 40.0% |
| ! | GAAACATTCTTTTGTGTCCC+AGG | - | chr3.1:91201977-91201996 | None:intergenic | 40.0% |
| ! | TTTAACTAGTAGTGCTGGAG+AGG | + | chr3.1:91202564-91202583 | MS.gene52776:CDS | 40.0% |
| ! | TTTCAGGTGAAGTCATTAGG+TGG | + | chr3.1:91201993-91202012 | MS.gene52776:CDS | 40.0% |
| !! | ACTGCTTTATTGGTTGATGG+TGG | + | chr3.1:91203389-91203408 | MS.gene52776:CDS | 40.0% |
| !! | AGTTGCAAAAGTGCTCAGAT+TGG | + | chr3.1:91201148-91201167 | MS.gene52776:intron | 40.0% |
| !! | CTTTATTGGTTGATGGTGGT+TGG | + | chr3.1:91203393-91203412 | MS.gene52776:CDS | 40.0% |
| !!! | CAAGGCTGGTTTTTATAGTG+AGG | + | chr3.1:91202950-91202969 | MS.gene52776:intron | 40.0% |
| !!! | CGAGTGATAGTTTTAGCACT+AGG | + | chr3.1:91201359-91201378 | MS.gene52776:intron | 40.0% |
| !!! | GTGATAGTTTTAGCACTAGG+TGG | + | chr3.1:91201362-91201381 | MS.gene52776:intron | 40.0% |
| AATACTTGAAGCGGAGATCG+AGG | + | chr3.1:91202063-91202082 | MS.gene52776:CDS | 45.0% | |
| ACAGCCATTTAGCAGCAATG+AGG | - | chr3.1:91201841-91201860 | None:intergenic | 45.0% | |
| ACCTGAAATCTCTTGAGCCT+CGG | + | chr3.1:91202143-91202162 | MS.gene52776:CDS | 45.0% | |
| AGACTAACCGCAGAGAAAGT+TGG | - | chr3.1:91200998-91201017 | None:intergenic | 45.0% | |
| ATGAGGAAAGGATTCGAGAC+AGG | - | chr3.1:91203138-91203157 | None:intergenic | 45.0% | |
| CACTGTACATAAGCTGTGCA+AGG | - | chr3.1:91201520-91201539 | None:intergenic | 45.0% | |
| CAGTACAGATCAGCATAGAG+AGG | - | chr3.1:91202259-91202278 | None:intergenic | 45.0% | |
| CATAAGCTGTGCAAGGTTCT+CGG | - | chr3.1:91201513-91201532 | None:intergenic | 45.0% | |
| CTACACTTGCCCTATTCCAT+GGG | - | chr3.1:91200413-91200432 | None:intergenic | 45.0% | |
| GACTAACCGCAGAGAAAGTT+GGG | - | chr3.1:91200997-91201016 | None:intergenic | 45.0% | |
| GAGATAGTAAGGGCCTCTAT+TGG | - | chr3.1:91203101-91203120 | None:intergenic | 45.0% | |
| GATAGGCAGTTTCTACATGC+TGG | + | chr3.1:91200916-91200935 | MS.gene52776:intron | 45.0% | |
| GATATTCCAGACTATGCACC+TGG | + | chr3.1:91201956-91201975 | MS.gene52776:CDS | 45.0% | |
| GCAACATTATGCCATCTAGC+TGG | + | chr3.1:91201398-91201417 | MS.gene52776:intron | 45.0% | |
| GGAAATTAGCTACACACCCT+AGG | - | chr3.1:91201711-91201730 | None:intergenic | 45.0% | |
| GGACATGGGAGAAAAACAGA+AGG | - | chr3.1:91202681-91202700 | None:intergenic | 45.0% | |
| GGTGAATCCAAATCCCCTAA+CGG | + | chr3.1:91200291-91200310 | MS.gene52776:CDS | 45.0% | |
| GTCGAATTTGACAGACTGCA+AGG | - | chr3.1:91202734-91202753 | None:intergenic | 45.0% | |
| TACGGGGTAGAGCATACAAA+AGG | - | chr3.1:91201032-91201051 | None:intergenic | 45.0% | |
| TCCGGACGTGCAAGATAAAA+AGG | + | chr3.1:91201616-91201635 | MS.gene52776:CDS | 45.0% | |
| TCTACACTTGCCCTATTCCA+TGG | - | chr3.1:91200414-91200433 | None:intergenic | 45.0% | |
| TCTCCTTAAGAACGGGACAT+GGG | - | chr3.1:91202695-91202714 | None:intergenic | 45.0% | |
| TCTTGAGCCTCGGAATTTGA+AGG | + | chr3.1:91202153-91202172 | MS.gene52776:CDS | 45.0% | |
| TGAGGAAAGGATTCGAGACA+GGG | - | chr3.1:91203137-91203156 | None:intergenic | 45.0% | |
| TGCTATTCCACGACACACAA+AGG | - | chr3.1:91201732-91201751 | None:intergenic | 45.0% | |
| TGTGAATCAACCCAGCTAGA+TGG | - | chr3.1:91201412-91201431 | None:intergenic | 45.0% | |
| TGTGGATGCTATGAGACAGA+CGG | + | chr3.1:91200774-91200793 | MS.gene52776:CDS | 45.0% | |
| TTACATCTCTGTTCAGCACC+AGG | + | chr3.1:91202383-91202402 | MS.gene52776:intron | 45.0% | |
| TTCCATAAATTCCGGCTGCA+CGG | - | chr3.1:91200599-91200618 | None:intergenic | 45.0% | |
| TTTATCTTGCACGTCCGGAA+GGG | - | chr3.1:91201615-91201634 | None:intergenic | 45.0% | |
| TTTGACAGACTGCAAGGACA+AGG | - | chr3.1:91202728-91202747 | None:intergenic | 45.0% | |
| TTTGTATGCTCTACCCCGTA+CGG | + | chr3.1:91201032-91201051 | MS.gene52776:intron | 45.0% | |
| ! | CATTTCTGGACCTGAGAGAA+TGG | + | chr3.1:91202021-91202040 | MS.gene52776:CDS | 45.0% |
| ! | TCAGTTCTTGGTGGTCTTTC+TGG | - | chr3.1:91201218-91201237 | None:intergenic | 45.0% |
| ! | TTTGGAACAAGTTGCCCTTC+CGG | + | chr3.1:91201598-91201617 | MS.gene52776:CDS | 45.0% |
| ! | TTTTATCTTGCACGTCCGGA+AGG | - | chr3.1:91201616-91201635 | None:intergenic | 45.0% |
| !! | AAAAGTACCAGAGTGCCGTT+AGG | - | chr3.1:91200309-91200328 | None:intergenic | 45.0% |
| !! | AAAAGTGCTCAGATTGGCCT+GGG | + | chr3.1:91201154-91201173 | MS.gene52776:intron | 45.0% |
| !! | AAAGTACCAGAGTGCCGTTA+GGG | - | chr3.1:91200308-91200327 | None:intergenic | 45.0% |
| !! | TGTAAAAAGAGCACCTCCAC+CGG | + | chr3.1:91200624-91200643 | MS.gene52776:intron | 45.0% |
| !!! | AAAATAAATAATATTTTTGT+TGG | + | chr3.1:91201753-91201772 | MS.gene52776:intron | 5.0% |
| !!! | AAATAAATAATATTTTTGTT+GGG | + | chr3.1:91201754-91201773 | MS.gene52776:intron | 5.0% |
| ACATGACAACACGTTACCGG+TGG | - | chr3.1:91200643-91200662 | None:intergenic | 50.0% | |
| ACTTGGAACTCCTGCAAAGC+TGG | + | chr3.1:91203461-91203480 | MS.gene52776:CDS | 50.0% | |
| AGTCCACATCAGCTGGATGA+AGG | - | chr3.1:91202220-91202239 | None:intergenic | 50.0% | |
| ATCTCTGTTCAGCACCAGGT+AGG | + | chr3.1:91202387-91202406 | MS.gene52776:intron | 50.0% | |
| GAGACTAGTGCATCCGAACT+TGG | + | chr3.1:91203363-91203382 | MS.gene52776:CDS | 50.0% | |
| GTCTCCTTAAGAACGGGACA+TGG | - | chr3.1:91202696-91202715 | None:intergenic | 50.0% | |
| TAAAAACCAGCCTTGGGCTG+AGG | - | chr3.1:91202945-91202964 | None:intergenic | 50.0% | |
| TAGGATCTGCAACAGCCAGT+AGG | - | chr3.1:91202624-91202643 | None:intergenic | 50.0% | |
| TCCGAGGCTCAAGAGATTTC+AGG | - | chr3.1:91202147-91202166 | None:intergenic | 50.0% | |
| TCTCCCATGTCCCGTTCTTA+AGG | + | chr3.1:91202689-91202708 | MS.gene52776:intron | 50.0% | |
| ! | TTTTAAGCGCAGGGAATGGG+AGG | - | chr3.1:91202476-91202495 | None:intergenic | 50.0% |
| !! | AAGTACCAGAGTGCCGTTAG+GGG | - | chr3.1:91200307-91200326 | None:intergenic | 50.0% |
| !! | CAAAAGTGCTCAGATTGGCC+TGG | + | chr3.1:91201153-91201172 | MS.gene52776:intron | 50.0% |
| AGCAGACAGTCCACATCAGC+TGG | - | chr3.1:91202227-91202246 | None:intergenic | 55.0% | |
| CAAATCCCCTAACGGCACTC+TGG | + | chr3.1:91200299-91200318 | MS.gene52776:CDS | 55.0% | |
| CACATCAGCTGGATGAAGGC+AGG | - | chr3.1:91202216-91202235 | None:intergenic | 55.0% | |
| CTGCCTTCATCCAGCTGATG+TGG | + | chr3.1:91202214-91202233 | MS.gene52776:intron | 55.0% | |
| GACCGTGCAGCCGGAATTTA+TGG | + | chr3.1:91200594-91200613 | MS.gene52776:CDS | 55.0% | |
| GGCAATTCAGCCAGCTTTGC+AGG | - | chr3.1:91203474-91203493 | None:intergenic | 55.0% | |
| GTATGTCAAGACCGTGCAGC+CGG | + | chr3.1:91200585-91200604 | MS.gene52776:CDS | 55.0% | |
| GTTATTCCTCAGCCCAAGGC+TGG | + | chr3.1:91202936-91202955 | MS.gene52776:intron | 55.0% | |
| GTTTGAACGCCAGTGTTCCC+AGG | - | chr3.1:91201174-91201193 | None:intergenic | 55.0% | |
| TGACAACACGTTACCGGTGG+AGG | - | chr3.1:91200640-91200659 | None:intergenic | 55.0% | |
| TGTGTCCCAGGTGCATAGTC+TGG | - | chr3.1:91201965-91201984 | None:intergenic | 55.0% | |
| ! | CGCTATGCCCGCATCCTTTT+TGG | - | chr3.1:91201124-91201143 | None:intergenic | 55.0% |
| ! | GGTCTTTCTGGCACGATGGT+CGG | - | chr3.1:91201206-91201225 | None:intergenic | 55.0% |
| ! | TGGTGGTCTTTCTGGCACGA+TGG | - | chr3.1:91201210-91201229 | None:intergenic | 55.0% |
| !! | CAGAGTGCCGTTAGGGGATT+TGG | - | chr3.1:91200301-91200320 | None:intergenic | 55.0% |
| !! | TCAGATTGGCCTGGGAACAC+TGG | + | chr3.1:91201162-91201181 | MS.gene52776:intron | 55.0% |
| AAGCTGGCTGAATTGCCGCC+AGG | + | chr3.1:91203477-91203496 | MS.gene52776:CDS | 60.0% | |
| ! | CTGGCACGATGGTCGGTTCT+TGG | - | chr3.1:91201199-91201218 | None:intergenic | 60.0% |
| ! | GCACGATGGTCGGTTCTTGG+CGG | - | chr3.1:91201196-91201215 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 91200283 | 91203512 | 91200283 | ID=MS.gene52776 |
| chr3.1 | mRNA | 91200283 | 91203512 | 91200283 | ID=MS.gene52776.t1;Parent=MS.gene52776 |
| chr3.1 | exon | 91200283 | 91200320 | 91200283 | ID=MS.gene52776.t1.exon1;Parent=MS.gene52776.t1 |
| chr3.1 | CDS | 91200283 | 91200320 | 91200283 | ID=cds.MS.gene52776.t1;Parent=MS.gene52776.t1 |
| chr3.1 | exon | 91200556 | 91200620 | 91200556 | ID=MS.gene52776.t1.exon2;Parent=MS.gene52776.t1 |
| chr3.1 | CDS | 91200556 | 91200620 | 91200556 | ID=cds.MS.gene52776.t1;Parent=MS.gene52776.t1 |
| chr3.1 | exon | 91200772 | 91200852 | 91200772 | ID=MS.gene52776.t1.exon3;Parent=MS.gene52776.t1 |
| chr3.1 | CDS | 91200772 | 91200852 | 91200772 | ID=cds.MS.gene52776.t1;Parent=MS.gene52776.t1 |
| chr3.1 | exon | 91200921 | 91201009 | 91200921 | ID=MS.gene52776.t1.exon4;Parent=MS.gene52776.t1 |
| chr3.1 | CDS | 91200921 | 91201009 | 91200921 | ID=cds.MS.gene52776.t1;Parent=MS.gene52776.t1 |
| chr3.1 | exon | 91201506 | 91201637 | 91201506 | ID=MS.gene52776.t1.exon5;Parent=MS.gene52776.t1 |
| chr3.1 | CDS | 91201506 | 91201637 | 91201506 | ID=cds.MS.gene52776.t1;Parent=MS.gene52776.t1 |
| chr3.1 | exon | 91201956 | 91202174 | 91201956 | ID=MS.gene52776.t1.exon6;Parent=MS.gene52776.t1 |
| chr3.1 | CDS | 91201956 | 91202174 | 91201956 | ID=cds.MS.gene52776.t1;Parent=MS.gene52776.t1 |
| chr3.1 | exon | 91202562 | 91202654 | 91202562 | ID=MS.gene52776.t1.exon7;Parent=MS.gene52776.t1 |
| chr3.1 | CDS | 91202562 | 91202654 | 91202562 | ID=cds.MS.gene52776.t1;Parent=MS.gene52776.t1 |
| chr3.1 | exon | 91203351 | 91203512 | 91203351 | ID=MS.gene52776.t1.exon8;Parent=MS.gene52776.t1 |
| chr3.1 | CDS | 91203351 | 91203512 | 91203351 | ID=cds.MS.gene52776.t1;Parent=MS.gene52776.t1 |
| Gene Sequence |
| Protein sequence |
