Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81254.t1 | XP_003617925.1 | 99.2 | 516 | 3 | 1 | 1 | 516 | 1 | 515 | 1.80E-291 | 1011.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81254.t1 | P52416 | 92.9 | 518 | 25 | 3 | 1 | 516 | 1 | 508 | 8.5e-274 | 943.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81254.t1 | G7KEK9 | 99.2 | 516 | 3 | 1 | 1 | 516 | 1 | 515 | 1.3e-291 | 1011.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene81254 | 0.882806 | 7.65E-71 | -1.69E-46 |
| MS.gene049257 | MS.gene81254 | 0.819346 | 1.22E-52 | -1.69E-46 |
| MS.gene049488 | MS.gene81254 | 0.805552 | 1.26E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene81254 | 0.812438 | 4.24E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene81254 | 0.823832 | 1.12E-53 | -1.69E-46 |
| MS.gene050133 | MS.gene81254 | -0.803981 | 2.69E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene81254 | 0.804351 | 2.25E-49 | -1.69E-46 |
| MS.gene050399 | MS.gene81254 | 0.806073 | 9.82E-50 | -1.69E-46 |
| MS.gene050400 | MS.gene81254 | 0.840899 | 6.59E-58 | -1.69E-46 |
| MS.gene050426 | MS.gene81254 | -0.840706 | 7.40E-58 | -1.69E-46 |
| MS.gene050553 | MS.gene81254 | 0.805308 | 1.42E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene81254 | 0.801723 | 7.87E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene81254 | 0.862023 | 6.80E-64 | -1.69E-46 |
| MS.gene05081 | MS.gene81254 | 0.874831 | 4.97E-68 | -1.69E-46 |
| MS.gene05105 | MS.gene81254 | 0.844139 | 9.10E-59 | -1.69E-46 |
| MS.gene051360 | MS.gene81254 | 0.828111 | 1.08E-54 | -1.69E-46 |
| MS.gene051455 | MS.gene81254 | 0.80635 | 8.59E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene81254 | 0.889695 | 1.92E-73 | -1.69E-46 |
| MS.gene051552 | MS.gene81254 | -0.815049 | 1.13E-51 | -1.69E-46 |
| MS.gene051734 | MS.gene81254 | 0.816657 | 4.94E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene81254 | 0.868004 | 9.01E-66 | -1.69E-46 |
| MS.gene052011 | MS.gene81254 | -0.859553 | 3.82E-63 | -1.69E-46 |
| MS.gene052077 | MS.gene81254 | 0.802235 | 6.18E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene81254 | 0.846186 | 2.54E-59 | -1.69E-46 |
| MS.gene052135 | MS.gene81254 | 0.839316 | 1.70E-57 | -1.69E-46 |
| MS.gene052136 | MS.gene81254 | 0.822717 | 2.04E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene81254 | 0.84241 | 2.63E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene81254 | 0.828343 | 9.48E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene81254 | 0.804398 | 2.20E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene81254 | 0.839834 | 1.25E-57 | -1.69E-46 |
| MS.gene052346 | MS.gene81254 | 0.820624 | 6.22E-53 | -1.69E-46 |
| MS.gene052414 | MS.gene81254 | 0.861001 | 1.39E-63 | -1.69E-46 |
| MS.gene052469 | MS.gene81254 | 0.862705 | 4.19E-64 | -1.69E-46 |
| MS.gene052481 | MS.gene81254 | 0.844502 | 7.26E-59 | -1.69E-46 |
| MS.gene052484 | MS.gene81254 | 0.814163 | 1.77E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene81254 | 0.818817 | 1.61E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene81254 | 0.813269 | 2.79E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene81254 | 0.81953 | 1.11E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene81254 | 0.832816 | 7.62E-56 | -1.69E-46 |
| MS.gene052872 | MS.gene81254 | 0.830715 | 2.51E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene81254 | 0.819113 | 1.38E-52 | -1.69E-46 |
| MS.gene052999 | MS.gene81254 | 0.819535 | 1.10E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene81254 | 0.825413 | 4.75E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene81254 | 0.815867 | 7.42E-52 | -1.69E-46 |
| MS.gene053330 | MS.gene81254 | 0.823968 | 1.04E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene81254 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene81254 | 0.818104 | 2.33E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene81254 | 0.812247 | 4.67E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene81254 | 0.80923 | 2.10E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene81254 | 0.813954 | 1.97E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene81254 | 0.836968 | 6.85E-57 | -1.69E-46 |
| MS.gene054719 | MS.gene81254 | 0.84631 | 2.35E-59 | -1.69E-46 |
| MS.gene054884 | MS.gene81254 | -0.830925 | 2.23E-55 | -1.69E-46 |
| MS.gene054927 | MS.gene81254 | 0.804085 | 2.56E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene81254 | 0.815927 | 7.19E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene81254 | 0.824784 | 6.69E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene81254 | 0.830018 | 3.72E-55 | -1.69E-46 |
| MS.gene055370 | MS.gene81254 | 0.831521 | 1.59E-55 | -1.69E-46 |
| MS.gene055539 | MS.gene81254 | 0.87496 | 4.49E-68 | -1.69E-46 |
| MS.gene05553 | MS.gene81254 | 0.85416 | 1.48E-61 | -1.69E-46 |
| MS.gene05556 | MS.gene81254 | 0.828142 | 1.06E-54 | -1.69E-46 |
| MS.gene055741 | MS.gene81254 | 0.854734 | 1.01E-61 | -1.69E-46 |
| MS.gene055744 | MS.gene81254 | 0.860863 | 1.54E-63 | -1.69E-46 |
| MS.gene055892 | MS.gene81254 | 0.818641 | 1.76E-52 | -1.69E-46 |
| MS.gene055893 | MS.gene81254 | 0.809872 | 1.53E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene81254 | 0.810026 | 1.41E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene81254 | 0.82206 | 2.90E-53 | -1.69E-46 |
| MS.gene056633 | MS.gene81254 | 0.804972 | 1.67E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene81254 | 0.827912 | 1.20E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene81254 | 0.826541 | 2.56E-54 | -1.69E-46 |
| MS.gene056877 | MS.gene81254 | 0.833112 | 6.43E-56 | -1.69E-46 |
| MS.gene057048 | MS.gene81254 | 0.81325 | 2.81E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene81254 | 0.823017 | 1.74E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene81254 | 0.846529 | 2.05E-59 | -1.69E-46 |
| MS.gene057196 | MS.gene81254 | 0.837514 | 4.97E-57 | -1.69E-46 |
| MS.gene057289 | MS.gene81254 | 0.84688 | 1.64E-59 | -1.69E-46 |
| MS.gene057332 | MS.gene81254 | 0.80916 | 2.17E-50 | -1.69E-46 |
| MS.gene057440 | MS.gene81254 | -0.812503 | 4.10E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene81254 | 0.856334 | 3.45E-62 | -1.69E-46 |
| MS.gene057823 | MS.gene81254 | 0.853573 | 2.19E-61 | -1.69E-46 |
| MS.gene057825 | MS.gene81254 | 0.825882 | 3.68E-54 | -1.69E-46 |
| MS.gene057856 | MS.gene81254 | 0.812758 | 3.61E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene81254 | 0.835995 | 1.21E-56 | -1.69E-46 |
| MS.gene058120 | MS.gene81254 | 0.815967 | 7.05E-52 | -1.69E-46 |
| MS.gene058276 | MS.gene81254 | 0.802741 | 4.86E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene81254 | 0.840845 | 6.80E-58 | -1.69E-46 |
| MS.gene058444 | MS.gene81254 | 0.904415 | 1.26E-79 | -1.69E-46 |
| MS.gene058700 | MS.gene81254 | 0.848858 | 4.69E-60 | -1.69E-46 |
| MS.gene058746 | MS.gene81254 | 0.80832 | 3.28E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene81254 | 0.811775 | 5.91E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene81254 | 0.815205 | 1.04E-51 | -1.69E-46 |
| MS.gene058948 | MS.gene81254 | 0.809462 | 1.87E-50 | -1.69E-46 |
| MS.gene059011 | MS.gene81254 | 0.802991 | 4.31E-49 | -1.69E-46 |
| MS.gene059023 | MS.gene81254 | 0.811703 | 6.13E-51 | -1.69E-46 |
| MS.gene059141 | MS.gene81254 | 0.815336 | 9.74E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene81254 | 0.840201 | 1.00E-57 | -1.69E-46 |
| MS.gene059512 | MS.gene81254 | 0.83333 | 5.67E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene81254 | 0.812396 | 4.33E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene81254 | 0.823243 | 1.54E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene81254 | 0.81674 | 4.73E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene81254 | 0.818606 | 1.80E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene81254 | 0.813135 | 2.98E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene81254 | 0.815162 | 1.06E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene81254 | 0.806828 | 6.80E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene81254 | 0.819763 | 9.79E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene81254 | 0.817717 | 2.85E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene81254 | 0.833093 | 6.50E-56 | -1.69E-46 |
| MS.gene060717 | MS.gene81254 | 0.840112 | 1.06E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene81254 | 0.801351 | 9.38E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene81254 | 0.841102 | 5.82E-58 | -1.69E-46 |
| MS.gene061154 | MS.gene81254 | 0.859591 | 3.72E-63 | -1.69E-46 |
| MS.gene061231 | MS.gene81254 | 0.836166 | 1.10E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81254.t1 | MTR_5g097010 | 99.225 | 516 | 3 | 1 | 1 | 516 | 1 | 515 | 0.0 | 1053 |
| MS.gene81254.t1 | MTR_3g082150 | 89.729 | 516 | 51 | 1 | 1 | 516 | 1 | 514 | 0.0 | 924 |
| MS.gene81254.t1 | MTR_4g131760 | 53.333 | 495 | 221 | 5 | 30 | 516 | 29 | 521 | 0.0 | 539 |
| MS.gene81254.t1 | MTR_7g111020 | 57.500 | 440 | 176 | 8 | 84 | 516 | 93 | 528 | 0.0 | 526 |
| MS.gene81254.t1 | MTR_3g112070 | 55.085 | 472 | 193 | 9 | 59 | 516 | 64 | 530 | 0.0 | 523 |
| MS.gene81254.t1 | MTR_3g116860 | 53.066 | 473 | 201 | 8 | 59 | 516 | 52 | 518 | 3.61e-168 | 486 |
| MS.gene81254.t1 | MTR_4g070430 | 52.283 | 438 | 201 | 5 | 84 | 516 | 94 | 528 | 1.15e-166 | 482 |
| MS.gene81254.t1 | MTR_7g111020 | 55.750 | 400 | 166 | 8 | 124 | 516 | 1 | 396 | 1.14e-159 | 459 |
| MS.gene81254.t1 | MTR_4g070430 | 52.208 | 385 | 176 | 5 | 84 | 463 | 94 | 475 | 3.35e-145 | 426 |
| MS.gene81254.t1 | MTR_7g104380 | 57.895 | 95 | 23 | 3 | 366 | 456 | 4 | 85 | 1.31e-24 | 102 |
| MS.gene81254.t1 | MTR_6g014000 | 78.182 | 55 | 12 | 0 | 420 | 474 | 266 | 320 | 1.95e-20 | 94.7 |
| MS.gene81254.t1 | MTR_3g056715 | 65.116 | 43 | 15 | 0 | 374 | 416 | 28 | 70 | 4.45e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81254.t1 | AT5G48300 | 85.769 | 520 | 70 | 3 | 1 | 516 | 1 | 520 | 0.0 | 893 |
| MS.gene81254.t1 | AT5G19220 | 52.031 | 517 | 233 | 8 | 10 | 516 | 11 | 522 | 0.0 | 538 |
| MS.gene81254.t1 | AT1G27680 | 57.175 | 439 | 179 | 5 | 84 | 516 | 83 | 518 | 0.0 | 531 |
| MS.gene81254.t1 | AT4G39210 | 47.692 | 520 | 239 | 9 | 16 | 516 | 16 | 521 | 4.14e-168 | 486 |
| MS.gene81254.t1 | AT4G39210 | 47.692 | 520 | 239 | 9 | 16 | 516 | 16 | 521 | 4.14e-168 | 486 |
| MS.gene81254.t1 | AT2G21590 | 50.529 | 473 | 213 | 7 | 59 | 516 | 57 | 523 | 4.27e-166 | 481 |
| MS.gene81254.t1 | AT2G21590 | 50.529 | 473 | 213 | 7 | 59 | 516 | 57 | 523 | 4.27e-166 | 481 |
| MS.gene81254.t1 | AT2G21590 | 50.529 | 473 | 213 | 7 | 59 | 516 | 57 | 523 | 4.27e-166 | 481 |
| MS.gene81254.t1 | AT2G21590 | 50.529 | 473 | 213 | 7 | 59 | 516 | 57 | 523 | 4.27e-166 | 481 |
| MS.gene81254.t1 | AT2G21590 | 50.529 | 473 | 213 | 7 | 59 | 516 | 57 | 523 | 4.27e-166 | 481 |
| MS.gene81254.t1 | AT2G21590 | 50.529 | 473 | 213 | 7 | 59 | 516 | 57 | 523 | 4.27e-166 | 481 |
| MS.gene81254.t1 | AT2G21590 | 50.529 | 473 | 213 | 7 | 59 | 516 | 57 | 523 | 4.27e-166 | 481 |
| MS.gene81254.t1 | AT1G05610 | 46.087 | 460 | 229 | 6 | 59 | 516 | 34 | 476 | 1.11e-141 | 417 |
| MS.gene81254.t1 | AT1G05610 | 46.320 | 462 | 231 | 6 | 59 | 516 | 34 | 482 | 1.35e-141 | 417 |
Find 99 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAAGATTGTTACAGTTTC+TGG | 0.099528 | 5.2:+81366075 | MS.gene81254:CDS |
| TTAGGTCGATACTACCATTT+TGG | 0.182482 | 5.2:+81367598 | MS.gene81254:intron |
| ATGCTGTGAGGCAATATTTA+TGG | 0.223531 | 5.2:+81367274 | MS.gene81254:CDS |
| ATTTAGTACAATGGCTTCTA+TGG | 0.248755 | 5.2:+81365942 | None:intergenic |
| TCTTATACCTGGAACCAATT+AGG | 0.277877 | 5.2:-81366847 | None:intergenic |
| GATATCACTGATAGTGTTAT+TGG | 0.282523 | 5.2:+81368374 | MS.gene81254:CDS |
| GCTTGCAACTGGTCTCCTTT+TGG | 0.300205 | 5.2:-81367504 | None:intergenic |
| TGGGGAAGGATGTGTGATTA+AGG | 0.308216 | 5.2:+81368394 | MS.gene81254:CDS |
| CTATTTAAGCAGTTGCTAAC+AGG | 0.334981 | 5.2:-81366679 | None:intergenic |
| TTCATCATCAAGACCCAAAA+TGG | 0.338471 | 5.2:-81367612 | None:intergenic |
| AGTCATTTGCACCAGGAAAT+TGG | 0.341546 | 5.2:-81367715 | None:intergenic |
| ATACCCATGCTAGCAATAAA+AGG | 0.346195 | 5.2:-81367650 | None:intergenic |
| ATATCACTGATAGTGTTATT+GGG | 0.347690 | 5.2:+81368375 | MS.gene81254:CDS |
| TTCCTGGTGCAAATGACTTT+GGG | 0.360622 | 5.2:+81367720 | MS.gene81254:CDS |
| TTGCTTCGCGACCAATTTCC+TGG | 0.362208 | 5.2:+81367704 | MS.gene81254:CDS |
| GAAAAGCGTGCAACTGCTTT+CGG | 0.366218 | 5.2:+81367432 | MS.gene81254:CDS |
| TATCGCGGTTGAGTGTAAAT+TGG | 0.366670 | 5.2:-81368323 | None:intergenic |
| TTTCCTGGTGCAAATGACTT+TGG | 0.393661 | 5.2:+81367719 | MS.gene81254:CDS |
| TGAGAATCCTAATTGGTTCC+AGG | 0.394813 | 5.2:+81366840 | MS.gene81254:CDS |
| CTTACTTATATGATGGCTAC+TGG | 0.396033 | 5.2:+81368108 | MS.gene81254:CDS |
| TATTGAAGACACTTTGTTGA+TGG | 0.396056 | 5.2:+81368595 | MS.gene81254:CDS |
| GTTGACAAGAATGCTAGAAT+TGG | 0.404186 | 5.2:+81368894 | MS.gene81254:CDS |
| AAAGTCCTGAGAATCCTAAT+TGG | 0.411364 | 5.2:+81366833 | MS.gene81254:CDS |
| GCAAAACCAGCTGTTCCTCT+TGG | 0.419432 | 5.2:+81366631 | MS.gene81254:CDS |
| GGCAGTGTTCCAATTGGTAT+TGG | 0.426491 | 5.2:+81368843 | MS.gene81254:CDS |
| TTCTCATCATCTCAACTCTC+TGG | 0.426995 | 5.2:+81366051 | MS.gene81254:CDS |
| TTGTTCATTCAGAGTGTACT+TGG | 0.433709 | 5.2:+81366553 | MS.gene81254:intron |
| TCCATTCTGTGGTCGGGCTG+CGG | 0.435088 | 5.2:+81368549 | MS.gene81254:CDS |
| AGTGTACTTGGCATTATACT+TGG | 0.438582 | 5.2:+81366565 | MS.gene81254:CDS |
| TGGAACCAATTAGGATTCTC+AGG | 0.441668 | 5.2:-81366838 | None:intergenic |
| ATTCCTGGTGCTACTTCCAT+TGG | 0.442617 | 5.2:+81367752 | MS.gene81254:CDS |
| AAAAGCCTGTACCTGACTTC+AGG | 0.442791 | 5.2:+81368183 | MS.gene81254:CDS |
| GAGTAACAATCACATGCTTC+CGG | 0.448356 | 5.2:-81366122 | None:intergenic |
| TTTGGGAGTGAAGTGATTCC+TGG | 0.451969 | 5.2:+81367737 | MS.gene81254:CDS |
| CATCTGTTTCCCTATGTGCT+TGG | 0.452131 | 5.2:-81367377 | None:intergenic |
| CTCTGCTAGCGTCAGGATCA+AGG | 0.461795 | 5.2:-81366182 | None:intergenic |
| CGTGCTTATGCAAGCAACCT+TGG | 0.464799 | 5.2:+81366766 | MS.gene81254:CDS |
| GTTACAGTTTCTGGTGGTGC+AGG | 0.467435 | 5.2:+81366084 | MS.gene81254:CDS |
| CTATTTATTTACCTGAAGTC+AGG | 0.470764 | 5.2:-81368194 | None:intergenic |
| GATGGGCGCGGATTATTATG+AGG | 0.472706 | 5.2:+81368613 | MS.gene81254:CDS |
| CGTAATCCATTCGATACAAA+TGG | 0.477237 | 5.2:-81367344 | None:intergenic |
| TCACCTTCATAGCTTGCAAC+TGG | 0.488306 | 5.2:-81367515 | None:intergenic |
| GTTTCTGGTGGTGCAGGAAG+AGG | 0.489728 | 5.2:+81366090 | MS.gene81254:CDS |
| TGCATTATAGAAAGCCTCAA+TGG | 0.493820 | 5.2:-81368144 | None:intergenic |
| GAGTTTCTGCCAATACCAAT+TGG | 0.493872 | 5.2:-81368852 | None:intergenic |
| AGACCAGTTGCAAGCTATGA+AGG | 0.497750 | 5.2:+81367512 | MS.gene81254:CDS |
| CGGTATCGTCACAATAATCA+AGG | 0.503615 | 5.2:+81369623 | MS.gene81254:CDS |
| GTTAAAGGCAGTGTTCCAAT+TGG | 0.505400 | 5.2:+81368837 | MS.gene81254:CDS |
| ATTTACCTGAAGTCAGGTAC+AGG | 0.505990 | 5.2:-81368188 | None:intergenic |
| CTCCCAAAGTCATTTGCACC+AGG | 0.511433 | 5.2:-81367722 | None:intergenic |
| ATGGCTTCTATGGCTACTAC+TGG | 0.512911 | 5.2:+81365952 | MS.gene81254:CDS |
| TTTGCTCTCTTCTTGGTGAG+TGG | 0.513424 | 5.2:-81366613 | None:intergenic |
| AAACTCACTCTGCTAGCGTC+AGG | 0.517611 | 5.2:-81366189 | None:intergenic |
| ATTGAAGACACTTTGTTGAT+GGG | 0.519372 | 5.2:+81368596 | MS.gene81254:CDS |
| AGAAATTTATCCAAGCACAT+AGG | 0.522176 | 5.2:+81367367 | MS.gene81254:CDS |
| TTAGCTCCAAGAGGAACAGC+TGG | 0.523224 | 5.2:-81366637 | None:intergenic |
| CGGTGACCATTTGTATCGAA+TGG | 0.523691 | 5.2:+81367338 | MS.gene81254:CDS |
| GTGCAAGCTTACTTATATGA+TGG | 0.525785 | 5.2:+81368101 | MS.gene81254:CDS |
| ACCGCAGCCCGACCACAGAA+TGG | 0.529090 | 5.2:-81368550 | None:intergenic |
| TGTGAATCAGAAACAGCCTT+AGG | 0.530492 | 5.2:-81366144 | None:intergenic |
| GTACTTGGCATTATACTTGG+AGG | 0.530626 | 5.2:+81366568 | MS.gene81254:CDS |
| GCATGTGATTGTTACTCCTA+AGG | 0.531636 | 5.2:+81366128 | MS.gene81254:CDS |
| GAAATTTATCCAAGCACATA+GGG | 0.548140 | 5.2:+81367368 | MS.gene81254:CDS |
| CAGGAAGAGGAAGATGCATC+CGG | 0.550332 | 5.2:+81366103 | MS.gene81254:CDS |
| CACTGTGGCTGCATTGCCAA+TGG | 0.554069 | 5.2:+81367407 | MS.gene81254:CDS |
| AGACACTTTGTTGATGGGCG+CGG | 0.554204 | 5.2:+81368601 | MS.gene81254:CDS |
| GCTTTCTATAATGCAAATCT+CGG | 0.554882 | 5.2:+81368152 | MS.gene81254:CDS |
| GAAGGTTATTTCATTAAAAG+CGG | 0.560913 | 5.2:+81369603 | MS.gene81254:CDS |
| ATTATACTTGGAGGTGGTGC+CGG | 0.562094 | 5.2:+81366577 | MS.gene81254:CDS |
| TTGGAGTACTTAATTCTGGC+CGG | 0.562380 | 5.2:+81367318 | MS.gene81254:CDS |
| TTACTTATATGATGGCTACT+GGG | 0.563247 | 5.2:+81368109 | MS.gene81254:CDS |
| ACTGATAGTGTTATTGGGGA+AGG | 0.567862 | 5.2:+81368380 | MS.gene81254:CDS |
| GCTTATGCAAGCAACCTTGG+TGG | 0.575280 | 5.2:+81366769 | MS.gene81254:CDS |
| CTTGGCATTATACTTGGAGG+TGG | 0.578848 | 5.2:+81366571 | MS.gene81254:CDS |
| CTGCGGTCTTGCATATCAGA+AGG | 0.580045 | 5.2:+81368566 | MS.gene81254:CDS |
| TTTCCAATGGAAGTAGCACC+AGG | 0.583076 | 5.2:-81367755 | None:intergenic |
| AACACATACTCTCTTTCCAA+TGG | 0.587424 | 5.2:-81367768 | None:intergenic |
| GAGTGGATATAGACGAGTAC+CGG | 0.599789 | 5.2:-81366596 | None:intergenic |
| CTGATGAAGATCGATGAAGA+GGG | 0.603378 | 5.2:+81367456 | MS.gene81254:CDS |
| TCTGATGAAGATCGATGAAG+AGG | 0.605701 | 5.2:+81367455 | MS.gene81254:CDS |
| GGAAGACATTGGTACCATTG+AGG | 0.607376 | 5.2:+81368130 | MS.gene81254:CDS |
| TCAGCATCAAGCATCTTCGA+TGG | 0.609318 | 5.2:-81368353 | None:intergenic |
| TATCACTGATAGTGTTATTG+GGG | 0.610791 | 5.2:+81368376 | MS.gene81254:CDS |
| CATAAGCACGAGAAAGATGT+CGG | 0.618768 | 5.2:-81366753 | None:intergenic |
| GATGGCTACTGGGAAGACAT+TGG | 0.627351 | 5.2:+81368119 | MS.gene81254:CDS |
| GCATCAAGCATCTTCGATGG+AGG | 0.628793 | 5.2:-81368350 | None:intergenic |
| GAAGCTGCAAGAGAAACAGA+AGG | 0.631881 | 5.2:+81369585 | MS.gene81254:CDS |
| AAGGATGCGTTAATTCCTAG+TGG | 0.633562 | 5.2:+81369642 | MS.gene81254:CDS |
| AAGATTGTTACAGTTTCTGG+TGG | 0.637778 | 5.2:+81366078 | MS.gene81254:CDS |
| CATTCGATACAAATGGTCAC+CGG | 0.640845 | 5.2:-81367337 | None:intergenic |
| TTCTAAATGACAGTTCCACT+AGG | 0.642519 | 5.2:-81369657 | None:intergenic |
| TCTTGATGATGAAAGAGCAA+AGG | 0.642796 | 5.2:+81367622 | MS.gene81254:CDS |
| TAGAATTGGAGAAAATGTGA+AGG | 0.647495 | 5.2:+81368908 | MS.gene81254:CDS |
| AGTCTATAGTTAGCTCCAAG+AGG | 0.652838 | 5.2:-81366646 | None:intergenic |
| TGATGAAGATCGATGAAGAG+GGG | 0.678706 | 5.2:+81367457 | MS.gene81254:CDS |
| TTCGATGGAGGCAAATATCG+CGG | 0.684638 | 5.2:-81368338 | None:intergenic |
| AGGGTACTGCAGATGCTGTG+AGG | 0.771116 | 5.2:+81367262 | MS.gene81254:intron |
| AACAGATGCTGATATCACTG+TGG | 0.779203 | 5.2:+81367392 | MS.gene81254:CDS |
| GATGAAGAAGAAGAACAACG+TGG | 0.833851 | 5.2:-81365988 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTGTGAATAATAA+AGG | - | chr5.2:81369120-81369139 | None:intergenic | 10.0% |
| !!! | TCATTTTATGTATTTTTTTT+GGG | + | chr5.2:81369243-81369262 | MS.gene81254:intron | 10.0% |
| !!! | TTCATTTTATGTATTTTTTT+TGG | + | chr5.2:81369242-81369261 | MS.gene81254:intron | 10.0% |
| !! | AATATTTATTCTCTATTCTT+AGG | + | chr5.2:81367580-81367599 | MS.gene81254:intron | 15.0% |
| !!! | ACTTTTAAAAATCTTACATA+TGG | + | chr5.2:81369525-81369544 | MS.gene81254:intron | 15.0% |
| !!! | ATCTATATATTTTCAATGTA+CGG | + | chr5.2:81369201-81369220 | MS.gene81254:intron | 15.0% |
| !!! | TTTAATTTCAAGAAACTTTT+CGG | + | chr5.2:81367802-81367821 | MS.gene81254:intron | 15.0% |
| !! | AAATGTTTGTTTCAATCTAA+AGG | - | chr5.2:81367915-81367934 | None:intergenic | 20.0% |
| !! | AATAATAATTGTAGTAGACA+TGG | + | chr5.2:81369374-81369393 | MS.gene81254:intron | 20.0% |
| !! | AGATGTCAAATATGATTAAA+TGG | + | chr5.2:81368471-81368490 | MS.gene81254:intron | 20.0% |
| !! | ATATTTGAAAAGATTTGATG+TGG | + | chr5.2:81367232-81367251 | MS.gene81254:intron | 20.0% |
| !! | ATGACAATATGATGATTATA+TGG | - | chr5.2:81368228-81368247 | None:intergenic | 20.0% |
| !! | ATTTGTTTAGGTATGAATTA+TGG | - | chr5.2:81367543-81367562 | None:intergenic | 20.0% |
| !!! | AGAAACTTCCTTTTTTTTTT+TGG | + | chr5.2:81368505-81368524 | MS.gene81254:intron | 20.0% |
| !!! | ATGGATTAGAAAGTAAAATA+GGG | - | chr5.2:81368969-81368988 | None:intergenic | 20.0% |
| !!! | TTTTTATGTTGCTTTTGAAT+CGG | + | chr5.2:81366903-81366922 | MS.gene81254:intron | 20.0% |
| ! | AAATCAGAAAATCAATGTTG+CGG | - | chr5.2:81368786-81368805 | None:intergenic | 25.0% |
| ! | CTAAGGATCCAAAAAAAAAA+AGG | - | chr5.2:81368516-81368535 | None:intergenic | 25.0% |
| ! | CTTGAAATTAAACAACTAGA+AGG | - | chr5.2:81367794-81367813 | None:intergenic | 25.0% |
| ! | GATTATTATGAGGTAAAATG+CGG | + | chr5.2:81368623-81368642 | MS.gene81254:intron | 25.0% |
| ! | TAGTTACATGTTTACATGAA+TGG | - | chr5.2:81369498-81369517 | None:intergenic | 25.0% |
| ! | TATTAAGCTTGACAAATTGT+TGG | + | chr5.2:81368995-81369014 | MS.gene81254:intron | 25.0% |
| ! | TGACTTCAGGTAAATAAATA+GGG | + | chr5.2:81368196-81368215 | MS.gene81254:intron | 25.0% |
| ! | TGTGAATAATAAAGGAAAGT+TGG | - | chr5.2:81369112-81369131 | None:intergenic | 25.0% |
| ! | TTCAAAAGCAACATAAAAAG+AGG | - | chr5.2:81366902-81366921 | None:intergenic | 25.0% |
| ! | TTTCTCTTGTAGATTGAATT+GGG | + | chr5.2:81366432-81366451 | MS.gene81254:intron | 25.0% |
| !! | AACAATTGCTCTTTTGATAT+GGG | - | chr5.2:81368877-81368896 | None:intergenic | 25.0% |
| !! | AACCAAAAATTATTTTCAGC+TGG | - | chr5.2:81366414-81366433 | None:intergenic | 25.0% |
| !! | AGTTTTTGTGAAAAATTCAC+AGG | + | chr5.2:81368079-81368098 | MS.gene81254:intron | 25.0% |
| !! | ATATCACTGATAGTGTTATT+GGG | + | chr5.2:81368375-81368394 | MS.gene81254:CDS | 25.0% |
| !! | GAAGGTTATTTCATTAAAAG+CGG | + | chr5.2:81369603-81369622 | MS.gene81254:CDS | 25.0% |
| !! | GTAACTTGTAAAGGTATAAA+GGG | + | chr5.2:81369268-81369287 | MS.gene81254:intron | 25.0% |
| !! | TACCAGCTGAAAATAATTTT+TGG | + | chr5.2:81366409-81366428 | MS.gene81254:intron | 25.0% |
| !! | TGTAACTTGTAAAGGTATAA+AGG | + | chr5.2:81369267-81369286 | MS.gene81254:intron | 25.0% |
| !! | TGTTTCAATCTAAAGGTTTT+TGG | - | chr5.2:81367908-81367927 | None:intergenic | 25.0% |
| !!! | AAAAGTTTTTTGGCTGTTAA+AGG | + | chr5.2:81368822-81368841 | MS.gene81254:CDS | 25.0% |
| !!! | AACTTTTGAAGCATTTGTTT+AGG | - | chr5.2:81367555-81367574 | None:intergenic | 25.0% |
| !!! | AGAAGCTGATAAAAGTTTTT+TGG | + | chr5.2:81368812-81368831 | MS.gene81254:CDS | 25.0% |
| !!! | GATGGATTAGAAAGTAAAAT+AGG | - | chr5.2:81368970-81368989 | None:intergenic | 25.0% |
| AAATGAATTTCACGTCTACT+AGG | - | chr5.2:81369229-81369248 | None:intergenic | 30.0% | |
| ACATTCATAGCTTAATTCTC+AGG | + | chr5.2:81368047-81368066 | MS.gene81254:intron | 30.0% | |
| AGAAATTTATCCAAGCACAT+AGG | + | chr5.2:81367367-81367386 | MS.gene81254:CDS | 30.0% | |
| ATTGAAGACACTTTGTTGAT+GGG | + | chr5.2:81368596-81368615 | MS.gene81254:CDS | 30.0% | |
| ATTTGCTTGTGTAAGTTACA+AGG | + | chr5.2:81368745-81368764 | MS.gene81254:intron | 30.0% | |
| CTAAAACTTCATCACGATAA+AGG | + | chr5.2:81367966-81367985 | MS.gene81254:intron | 30.0% | |
| CTATTTATTTACCTGAAGTC+AGG | - | chr5.2:81368197-81368216 | None:intergenic | 30.0% | |
| CTGACTTCAGGTAAATAAAT+AGG | + | chr5.2:81368195-81368214 | MS.gene81254:intron | 30.0% | |
| GAAATTTATCCAAGCACATA+GGG | + | chr5.2:81367368-81367387 | MS.gene81254:CDS | 30.0% | |
| GCTAATTGAGAACATAGTTA+AGG | - | chr5.2:81366876-81366895 | None:intergenic | 30.0% | |
| GCTTTCTATAATGCAAATCT+CGG | + | chr5.2:81368152-81368171 | MS.gene81254:CDS | 30.0% | |
| GGATTATAAAGTTCAACAGT+TGG | - | chr5.2:81368018-81368037 | None:intergenic | 30.0% | |
| GTTTCTCTTGTAGATTGAAT+TGG | + | chr5.2:81366431-81366450 | MS.gene81254:intron | 30.0% | |
| TAGAATTGGAGAAAATGTGA+AGG | + | chr5.2:81368908-81368927 | MS.gene81254:CDS | 30.0% | |
| TATAATGTGTCTCATGTTTC+TGG | + | chr5.2:81366986-81367005 | MS.gene81254:intron | 30.0% | |
| TATTGAAGACACTTTGTTGA+TGG | + | chr5.2:81368595-81368614 | MS.gene81254:CDS | 30.0% | |
| TCTCCTATATTTGTATTCTC+CGG | - | chr5.2:81367137-81367156 | None:intergenic | 30.0% | |
| TGAGACAACCAAAACTTAAA+AGG | + | chr5.2:81369320-81369339 | MS.gene81254:intron | 30.0% | |
| TTACTTATATGATGGCTACT+GGG | + | chr5.2:81368109-81368128 | MS.gene81254:CDS | 30.0% | |
| TTTGCTTGTGTAAGTTACAA+GGG | + | chr5.2:81368746-81368765 | MS.gene81254:intron | 30.0% | |
| ! | AAAATTTTCCATTCTGTGGT+CGG | + | chr5.2:81368542-81368561 | MS.gene81254:CDS | 30.0% |
| ! | AGCTATGAATGTTTTATAGC+AGG | - | chr5.2:81368039-81368058 | None:intergenic | 30.0% |
| ! | CAACAATTGCTCTTTTGATA+TGG | - | chr5.2:81368878-81368897 | None:intergenic | 30.0% |
| ! | GAATTTTCAGAAAAGCCAAA+AGG | + | chr5.2:81367489-81367508 | MS.gene81254:CDS | 30.0% |
| ! | GAGTTTATCTCTTTTGCTTT+TGG | + | chr5.2:81366206-81366225 | MS.gene81254:intron | 30.0% |
| ! | GATATCACTGATAGTGTTAT+TGG | + | chr5.2:81368374-81368393 | MS.gene81254:CDS | 30.0% |
| ! | GGAATGAAAGTGTATATAGT+TGG | - | chr5.2:81368948-81368967 | None:intergenic | 30.0% |
| ! | TATCACTGATAGTGTTATTG+GGG | + | chr5.2:81368376-81368395 | MS.gene81254:CDS | 30.0% |
| ! | TGGAAAATTTTGCAGTTCTA+AGG | - | chr5.2:81368533-81368552 | None:intergenic | 30.0% |
| ! | TTCATTTCTAGAGATGATAC+AGG | - | chr5.2:81367209-81367228 | None:intergenic | 30.0% |
| !! | CAAACATTTGTTTTTCCCAT+CGG | + | chr5.2:81367926-81367945 | MS.gene81254:intron | 30.0% |
| !! | TTTTGAAGAGCACAATGTTT+TGG | + | chr5.2:81367299-81367318 | MS.gene81254:CDS | 30.0% |
| !!! | TCTTTGGTCCTTTTAAGTTT+TGG | - | chr5.2:81369331-81369350 | None:intergenic | 30.0% |
| !!! | TGTTTTGGAGTACTTAATTC+TGG | + | chr5.2:81367314-81367333 | MS.gene81254:CDS | 30.0% |
| !!! | TTTTGGGTTGTAACTTGTAA+AGG | + | chr5.2:81369259-81369278 | MS.gene81254:intron | 30.0% |
| AAAGTCCTGAGAATCCTAAT+TGG | + | chr5.2:81366833-81366852 | MS.gene81254:CDS | 35.0% | |
| AACACATACTCTCTTTCCAA+TGG | - | chr5.2:81367771-81367790 | None:intergenic | 35.0% | |
| ACATAAAGGGACCAAAGATT+AGG | - | chr5.2:81369049-81369068 | None:intergenic | 35.0% | |
| AGAAAATCAATGTTGCGGTT+AGG | - | chr5.2:81368781-81368800 | None:intergenic | 35.0% | |
| AGCTTAATTCTCAGGATTTG+AGG | + | chr5.2:81368055-81368074 | MS.gene81254:intron | 35.0% | |
| AGTGTACTTGGCATTATACT+TGG | + | chr5.2:81366565-81366584 | MS.gene81254:CDS | 35.0% | |
| AGTTAAGGCAATCTTATACC+TGG | - | chr5.2:81366861-81366880 | None:intergenic | 35.0% | |
| ATACCCATGCTAGCAATAAA+AGG | - | chr5.2:81367653-81367672 | None:intergenic | 35.0% | |
| ATGAAGCACATATACGAACA+CGG | - | chr5.2:81366372-81366391 | None:intergenic | 35.0% | |
| ATGCTGTGAGGCAATATTTA+TGG | + | chr5.2:81367274-81367293 | MS.gene81254:CDS | 35.0% | |
| CAACAAAACATCGCAAAAAG+AGG | - | chr5.2:81369450-81369469 | None:intergenic | 35.0% | |
| CAACCGGAGAATACAAATAT+AGG | + | chr5.2:81367131-81367150 | MS.gene81254:intron | 35.0% | |
| CGTAATCCATTCGATACAAA+TGG | - | chr5.2:81367347-81367366 | None:intergenic | 35.0% | |
| CTATTTAAGCAGTTGCTAAC+AGG | - | chr5.2:81366682-81366701 | None:intergenic | 35.0% | |
| CTTACTTATATGATGGCTAC+TGG | + | chr5.2:81368108-81368127 | MS.gene81254:CDS | 35.0% | |
| GACAAGATTGTTACAGTTTC+TGG | + | chr5.2:81366075-81366094 | MS.gene81254:CDS | 35.0% | |
| GGTAAACGTGTATCGTTAAA+TGG | + | chr5.2:81367028-81367047 | MS.gene81254:intron | 35.0% | |
| GTCAAGCTTAATATGAGAGA+TGG | - | chr5.2:81368988-81369007 | None:intergenic | 35.0% | |
| GTGCAAGCTTACTTATATGA+TGG | + | chr5.2:81368101-81368120 | MS.gene81254:CDS | 35.0% | |
| GTTGACAAGAATGCTAGAAT+TGG | + | chr5.2:81368894-81368913 | MS.gene81254:CDS | 35.0% | |
| TATTTGTATTCTCCGGTTGT+AGG | - | chr5.2:81367130-81367149 | None:intergenic | 35.0% | |
| TCAGCTCTTAGCTCAAAAAA+AGG | - | chr5.2:81366243-81366262 | None:intergenic | 35.0% | |
| TCTTATACCTGGAACCAATT+AGG | - | chr5.2:81366850-81366869 | None:intergenic | 35.0% | |
| TGCATTATAGAAAGCCTCAA+TGG | - | chr5.2:81368147-81368166 | None:intergenic | 35.0% | |
| TTCATCATCAAGACCCAAAA+TGG | - | chr5.2:81367615-81367634 | None:intergenic | 35.0% | |
| TTGTTCATTCAGAGTGTACT+TGG | + | chr5.2:81366553-81366572 | MS.gene81254:intron | 35.0% | |
| ! | AAATTTTCCATTCTGTGGTC+GGG | + | chr5.2:81368543-81368562 | MS.gene81254:CDS | 35.0% |
| ! | AACTTTTATCAGCTTCTGTC+TGG | - | chr5.2:81368809-81368828 | None:intergenic | 35.0% |
| ! | AAGATTGTTACAGTTTCTGG+TGG | + | chr5.2:81366078-81366097 | MS.gene81254:CDS | 35.0% |
| ! | AATGCCTTTTATTGCTAGCA+TGG | + | chr5.2:81367646-81367665 | MS.gene81254:CDS | 35.0% |
| ! | ATGCCTTTTATTGCTAGCAT+GGG | + | chr5.2:81367647-81367666 | MS.gene81254:CDS | 35.0% |
| ! | CTCTTTTTGCGATGTTTTGT+TGG | + | chr5.2:81369448-81369467 | MS.gene81254:intron | 35.0% |
| ! | CTGCAAAATTTTCCATTCTG+TGG | + | chr5.2:81368538-81368557 | MS.gene81254:CDS | 35.0% |
| ! | TAGGTCGATACTACCATTTT+GGG | + | chr5.2:81367599-81367618 | MS.gene81254:intron | 35.0% |
| ! | TTAGGTCGATACTACCATTT+TGG | + | chr5.2:81367598-81367617 | MS.gene81254:intron | 35.0% |
| !! | TCTTGATGATGAAAGAGCAA+AGG | + | chr5.2:81367622-81367641 | MS.gene81254:CDS | 35.0% |
| !! | TTTTGGTTGTCTCAAGACTT+TGG | - | chr5.2:81369314-81369333 | None:intergenic | 35.0% |
| !!! | CAAAAATGAGGGTTTTGTTG+AGG | + | chr5.2:81366795-81366814 | MS.gene81254:CDS | 35.0% |
| AACAGATGCTGATATCACTG+TGG | + | chr5.2:81367392-81367411 | MS.gene81254:CDS | 40.0% | |
| AAGGATGCGTTAATTCCTAG+TGG | + | chr5.2:81369642-81369661 | MS.gene81254:CDS | 40.0% | |
| ACATATACGAACACGGATAC+TGG | - | chr5.2:81366365-81366384 | None:intergenic | 40.0% | |
| AGATTTGATGTGGTCATTGC+AGG | + | chr5.2:81367242-81367261 | MS.gene81254:intron | 40.0% | |
| AGCTTTGCGTCGAAACATAA+AGG | - | chr5.2:81369063-81369082 | None:intergenic | 40.0% | |
| AGTCATTTGCACCAGGAAAT+TGG | - | chr5.2:81367718-81367737 | None:intergenic | 40.0% | |
| AGTCTATAGTTAGCTCCAAG+AGG | - | chr5.2:81366649-81366668 | None:intergenic | 40.0% | |
| ATTTACCTGAAGTCAGGTAC+AGG | - | chr5.2:81368191-81368210 | None:intergenic | 40.0% | |
| CATAAGCACGAGAAAGATGT+CGG | - | chr5.2:81366756-81366775 | None:intergenic | 40.0% | |
| CATCTTGGTCATCGTGTTTA+TGG | + | chr5.2:81368268-81368287 | MS.gene81254:intron | 40.0% | |
| CATTCGATACAAATGGTCAC+CGG | - | chr5.2:81367340-81367359 | None:intergenic | 40.0% | |
| CGGTATCGTCACAATAATCA+AGG | + | chr5.2:81369623-81369642 | MS.gene81254:CDS | 40.0% | |
| CTCTCTATGTCTCTGATCTT+TGG | - | chr5.2:81369347-81369366 | None:intergenic | 40.0% | |
| CTGATGAAGATCGATGAAGA+GGG | + | chr5.2:81367456-81367475 | MS.gene81254:CDS | 40.0% | |
| GACCAAAGATTAGGAACAGA+GGG | - | chr5.2:81369040-81369059 | None:intergenic | 40.0% | |
| GAGTAACAATCACATGCTTC+CGG | - | chr5.2:81366125-81366144 | None:intergenic | 40.0% | |
| GAGTTTCTGCCAATACCAAT+TGG | - | chr5.2:81368855-81368874 | None:intergenic | 40.0% | |
| GATGAAGAAGAAGAACAACG+TGG | - | chr5.2:81365991-81366010 | None:intergenic | 40.0% | |
| GATTTGATGTGGTCATTGCA+GGG | + | chr5.2:81367243-81367262 | MS.gene81254:intron | 40.0% | |
| GCATGTGATTGTTACTCCTA+AGG | + | chr5.2:81366128-81366147 | MS.gene81254:CDS | 40.0% | |
| GCTTTGCGTCGAAACATAAA+GGG | - | chr5.2:81369062-81369081 | None:intergenic | 40.0% | |
| GTACTTGGCATTATACTTGG+AGG | + | chr5.2:81366568-81366587 | MS.gene81254:CDS | 40.0% | |
| GTTAAAGGCAGTGTTCCAAT+TGG | + | chr5.2:81368837-81368856 | MS.gene81254:CDS | 40.0% | |
| TATCGCGGTTGAGTGTAAAT+TGG | - | chr5.2:81368326-81368345 | None:intergenic | 40.0% | |
| TCTGATGAAGATCGATGAAG+AGG | + | chr5.2:81367455-81367474 | MS.gene81254:CDS | 40.0% | |
| TGATGAAGATCGATGAAGAG+GGG | + | chr5.2:81367457-81367476 | MS.gene81254:CDS | 40.0% | |
| TGGAACCAATTAGGATTCTC+AGG | - | chr5.2:81366841-81366860 | None:intergenic | 40.0% | |
| TGTGAATCAGAAACAGCCTT+AGG | - | chr5.2:81366147-81366166 | None:intergenic | 40.0% | |
| TTCCTGGTGCAAATGACTTT+GGG | + | chr5.2:81367720-81367739 | MS.gene81254:CDS | 40.0% | |
| TTCTCATCATCTCAACTCTC+TGG | + | chr5.2:81366051-81366070 | MS.gene81254:CDS | 40.0% | |
| TTTCCTGGTGCAAATGACTT+TGG | + | chr5.2:81367719-81367738 | MS.gene81254:CDS | 40.0% | |
| ! | ACTGATAGTGTTATTGGGGA+AGG | + | chr5.2:81368380-81368399 | MS.gene81254:CDS | 40.0% |
| ! | CAATCCATTTTCCTGGTGTT+TGG | + | chr5.2:81367170-81367189 | MS.gene81254:intron | 40.0% |
| ! | CTTCATGCAATCCATTTTCC+TGG | + | chr5.2:81367163-81367182 | MS.gene81254:intron | 40.0% |
| ! | CTTGGTGGCTACAAAAATGA+GGG | + | chr5.2:81366784-81366803 | MS.gene81254:CDS | 40.0% |
| ! | GCGGTTTAAAACTACTTGCA+CGG | + | chr5.2:81368642-81368661 | MS.gene81254:intron | 40.0% |
| ! | GGTCGATGCTTATGATTTGT+TGG | + | chr5.2:81367987-81368006 | MS.gene81254:intron | 40.0% |
| ! | TCTAGTCTTCAACCTACAAC+CGG | + | chr5.2:81367115-81367134 | MS.gene81254:intron | 40.0% |
| ! | TGAGAATCCTAATTGGTTCC+AGG | + | chr5.2:81366840-81366859 | MS.gene81254:CDS | 40.0% |
| ! | TTGGAGTACTTAATTCTGGC+CGG | + | chr5.2:81367318-81367337 | MS.gene81254:CDS | 40.0% |
| !! | TGTACTCAATGAGAGCATCT+TGG | + | chr5.2:81368253-81368272 | MS.gene81254:intron | 40.0% |
| !! | TTTGTTTTTCCCATCGGAAC+TGG | + | chr5.2:81367932-81367951 | MS.gene81254:intron | 40.0% |
| AAAAAGTCAGCCAGTTCCGA+TGG | - | chr5.2:81367945-81367964 | None:intergenic | 45.0% | |
| AAAAGCCTGTACCTGACTTC+AGG | + | chr5.2:81368183-81368202 | MS.gene81254:CDS | 45.0% | |
| AAAAGTCAGCCAGTTCCGAT+GGG | - | chr5.2:81367944-81367963 | None:intergenic | 45.0% | |
| AGACCAGTTGCAAGCTATGA+AGG | + | chr5.2:81367512-81367531 | MS.gene81254:CDS | 45.0% | |
| ATCAACAGCTTCCAAACACC+AGG | - | chr5.2:81367184-81367203 | None:intergenic | 45.0% | |
| ATGGCTTCTATGGCTACTAC+TGG | + | chr5.2:81365952-81365971 | MS.gene81254:CDS | 45.0% | |
| ATTATACTTGGAGGTGGTGC+CGG | + | chr5.2:81366577-81366596 | MS.gene81254:CDS | 45.0% | |
| CATCTGTTTCCCTATGTGCT+TGG | - | chr5.2:81367380-81367399 | None:intergenic | 45.0% | |
| CGGTGACCATTTGTATCGAA+TGG | + | chr5.2:81367338-81367357 | MS.gene81254:CDS | 45.0% | |
| CTCCCTCTGTTCCTAATCTT+TGG | + | chr5.2:81369035-81369054 | MS.gene81254:intron | 45.0% | |
| CTTGGCATTATACTTGGAGG+TGG | + | chr5.2:81366571-81366590 | MS.gene81254:CDS | 45.0% | |
| GAACAGAGGGAGTAGATGAT+AGG | - | chr5.2:81369027-81369046 | None:intergenic | 45.0% | |
| GAAGCTGCAAGAGAAACAGA+AGG | + | chr5.2:81369585-81369604 | MS.gene81254:CDS | 45.0% | |
| GAGTGGATATAGACGAGTAC+CGG | - | chr5.2:81366599-81366618 | None:intergenic | 45.0% | |
| GCTTCCAAACACCAGGAAAA+TGG | - | chr5.2:81367177-81367196 | None:intergenic | 45.0% | |
| GGAAGACATTGGTACCATTG+AGG | + | chr5.2:81368130-81368149 | MS.gene81254:CDS | 45.0% | |
| GGACCAAAGATTAGGAACAG+AGG | - | chr5.2:81369041-81369060 | None:intergenic | 45.0% | |
| GGATCGAGATTCACTGTAGT+CGG | + | chr5.2:81367007-81367026 | MS.gene81254:intron | 45.0% | |
| GGCAGTGTTCCAATTGGTAT+TGG | + | chr5.2:81368843-81368862 | MS.gene81254:CDS | 45.0% | |
| TCAGCATCAAGCATCTTCGA+TGG | - | chr5.2:81368356-81368375 | None:intergenic | 45.0% | |
| TCATATGTTAGTGCCCGTGT+CGG | + | chr5.2:81366317-81366336 | MS.gene81254:intron | 45.0% | |
| TGGGGAAGGATGTGTGATTA+AGG | + | chr5.2:81368394-81368413 | MS.gene81254:CDS | 45.0% | |
| TGGTGTTTGGAAGCTGTTGA+TGG | + | chr5.2:81367183-81367202 | MS.gene81254:intron | 45.0% | |
| TTCGATGGAGGCAAATATCG+CGG | - | chr5.2:81368341-81368360 | None:intergenic | 45.0% | |
| TTTCCAATGGAAGTAGCACC+AGG | - | chr5.2:81367758-81367777 | None:intergenic | 45.0% | |
| TTTGCTCTCTTCTTGGTGAG+TGG | - | chr5.2:81366616-81366635 | None:intergenic | 45.0% | |
| TTTGGGAGTGAAGTGATTCC+TGG | + | chr5.2:81367737-81367756 | MS.gene81254:CDS | 45.0% | |
| ! | CCTTGGTGGCTACAAAAATG+AGG | + | chr5.2:81366783-81366802 | MS.gene81254:CDS | 45.0% |
| ! | GAAAAGCGTGCAACTGCTTT+CGG | + | chr5.2:81367432-81367451 | MS.gene81254:CDS | 45.0% |
| ! | GAAGTCAGGTACAGGCTTTT+TGG | - | chr5.2:81368183-81368202 | None:intergenic | 45.0% |
| ! | TCACCTTCATAGCTTGCAAC+TGG | - | chr5.2:81367518-81367537 | None:intergenic | 45.0% |
| !! | ATTCCTGGTGCTACTTCCAT+TGG | + | chr5.2:81367752-81367771 | MS.gene81254:CDS | 45.0% |
| !! | CCTCATTTTTGTAGCCACCA+AGG | - | chr5.2:81366786-81366805 | None:intergenic | 45.0% |
| !!! | AGCTGGTTTTGCTCTCTTCT+TGG | - | chr5.2:81366623-81366642 | None:intergenic | 45.0% |
| AAACTCACTCTGCTAGCGTC+AGG | - | chr5.2:81366192-81366211 | None:intergenic | 50.0% | |
| CAGGAAGAGGAAGATGCATC+CGG | + | chr5.2:81366103-81366122 | MS.gene81254:CDS | 50.0% | |
| CGTGCTTATGCAAGCAACCT+TGG | + | chr5.2:81366766-81366785 | MS.gene81254:CDS | 50.0% | |
| CTCCCAAAGTCATTTGCACC+AGG | - | chr5.2:81367725-81367744 | None:intergenic | 50.0% | |
| CTGCGGTCTTGCATATCAGA+AGG | + | chr5.2:81368566-81368585 | MS.gene81254:CDS | 50.0% | |
| GATGGCTACTGGGAAGACAT+TGG | + | chr5.2:81368119-81368138 | MS.gene81254:CDS | 50.0% | |
| GCAAAACCAGCTGTTCCTCT+TGG | + | chr5.2:81366631-81366650 | MS.gene81254:CDS | 50.0% | |
| GCATCAAGCATCTTCGATGG+AGG | - | chr5.2:81368353-81368372 | None:intergenic | 50.0% | |
| GCTTATGCAAGCAACCTTGG+TGG | + | chr5.2:81366769-81366788 | MS.gene81254:CDS | 50.0% | |
| TTAGCTCCAAGAGGAACAGC+TGG | - | chr5.2:81366640-81366659 | None:intergenic | 50.0% | |
| TTGCTTCGCGACCAATTTCC+TGG | + | chr5.2:81367704-81367723 | MS.gene81254:CDS | 50.0% | |
| ! | AGACACTTTGTTGATGGGCG+CGG | + | chr5.2:81368601-81368620 | MS.gene81254:CDS | 50.0% |
| ! | GATGGGCGCGGATTATTATG+AGG | + | chr5.2:81368613-81368632 | MS.gene81254:CDS | 50.0% |
| ! | GTTGCACGCTTTTCGTCCAT+TGG | - | chr5.2:81367426-81367445 | None:intergenic | 50.0% |
| !! | GCTTGCAACTGGTCTCCTTT+TGG | - | chr5.2:81367507-81367526 | None:intergenic | 50.0% |
| !! | GTTACAGTTTCTGGTGGTGC+AGG | + | chr5.2:81366084-81366103 | MS.gene81254:CDS | 50.0% |
| CACTGTGGCTGCATTGCCAA+TGG | + | chr5.2:81367407-81367426 | MS.gene81254:CDS | 55.0% | |
| CGAACACTGACACACCGACA+CGG | - | chr5.2:81366334-81366353 | None:intergenic | 55.0% | |
| CTCTGCTAGCGTCAGGATCA+AGG | - | chr5.2:81366185-81366204 | None:intergenic | 55.0% | |
| GAACACTGACACACCGACAC+GGG | - | chr5.2:81366333-81366352 | None:intergenic | 55.0% | |
| !! | AGGGTACTGCAGATGCTGTG+AGG | + | chr5.2:81367262-81367281 | MS.gene81254:intron | 55.0% |
| !! | GTTTCTGGTGGTGCAGGAAG+AGG | + | chr5.2:81366090-81366109 | MS.gene81254:CDS | 55.0% |
| TCCATTCTGTGGTCGGGCTG+CGG | + | chr5.2:81368549-81368568 | MS.gene81254:CDS | 60.0% | |
| ACCGCAGCCCGACCACAGAA+TGG | - | chr5.2:81368553-81368572 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 81365952 | 81369677 | 81365952 | ID=MS.gene81254 |
| chr5.2 | mRNA | 81365952 | 81369677 | 81365952 | ID=MS.gene81254.t1;Parent=MS.gene81254 |
| chr5.2 | exon | 81365952 | 81366203 | 81365952 | ID=MS.gene81254.t1.exon1;Parent=MS.gene81254.t1 |
| chr5.2 | CDS | 81365952 | 81366203 | 81365952 | ID=cds.MS.gene81254.t1;Parent=MS.gene81254.t1 |
| chr5.2 | exon | 81366565 | 81366861 | 81366565 | ID=MS.gene81254.t1.exon2;Parent=MS.gene81254.t1 |
| chr5.2 | CDS | 81366565 | 81366861 | 81366565 | ID=cds.MS.gene81254.t1;Parent=MS.gene81254.t1 |
| chr5.2 | exon | 81367264 | 81367533 | 81367264 | ID=MS.gene81254.t1.exon3;Parent=MS.gene81254.t1 |
| chr5.2 | CDS | 81367264 | 81367533 | 81367264 | ID=cds.MS.gene81254.t1;Parent=MS.gene81254.t1 |
| chr5.2 | exon | 81367602 | 81367781 | 81367602 | ID=MS.gene81254.t1.exon4;Parent=MS.gene81254.t1 |
| chr5.2 | CDS | 81367602 | 81367781 | 81367602 | ID=cds.MS.gene81254.t1;Parent=MS.gene81254.t1 |
| chr5.2 | exon | 81368101 | 81368204 | 81368101 | ID=MS.gene81254.t1.exon5;Parent=MS.gene81254.t1 |
| chr5.2 | CDS | 81368101 | 81368204 | 81368101 | ID=cds.MS.gene81254.t1;Parent=MS.gene81254.t1 |
| chr5.2 | exon | 81368304 | 81368415 | 81368304 | ID=MS.gene81254.t1.exon6;Parent=MS.gene81254.t1 |
| chr5.2 | CDS | 81368304 | 81368415 | 81368304 | ID=cds.MS.gene81254.t1;Parent=MS.gene81254.t1 |
| chr5.2 | exon | 81368536 | 81368634 | 81368536 | ID=MS.gene81254.t1.exon7;Parent=MS.gene81254.t1 |
| chr5.2 | CDS | 81368536 | 81368634 | 81368536 | ID=cds.MS.gene81254.t1;Parent=MS.gene81254.t1 |
| chr5.2 | exon | 81368810 | 81368929 | 81368810 | ID=MS.gene81254.t1.exon8;Parent=MS.gene81254.t1 |
| chr5.2 | CDS | 81368810 | 81368929 | 81368810 | ID=cds.MS.gene81254.t1;Parent=MS.gene81254.t1 |
| chr5.2 | exon | 81369561 | 81369677 | 81369561 | ID=MS.gene81254.t1.exon9;Parent=MS.gene81254.t1 |
| chr5.2 | CDS | 81369561 | 81369677 | 81369561 | ID=cds.MS.gene81254.t1;Parent=MS.gene81254.t1 |
| Gene Sequence |
| Protein sequence |
