Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33072.t1 | XP_013465855.1 | 89.7 | 399 | 11 | 3 | 1 | 369 | 1 | 399 | 2.90E-195 | 691 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33072.t1 | A0A072VDN8 | 89.7 | 399 | 11 | 3 | 1 | 369 | 1 | 399 | 2.1e-195 | 691.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene33072 | 0.831172 | 1.94E-55 | -1.69E-46 |
| MS.gene049170 | MS.gene33072 | 0.840162 | 1.03E-57 | -1.69E-46 |
| MS.gene049257 | MS.gene33072 | 0.823668 | 1.22E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene33072 | 0.829298 | 5.57E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene33072 | 0.812527 | 4.05E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene33072 | 0.804215 | 2.40E-49 | -1.69E-46 |
| MS.gene050133 | MS.gene33072 | -0.81355 | 2.42E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene33072 | 0.855766 | 5.06E-62 | -1.69E-46 |
| MS.gene050400 | MS.gene33072 | 0.865282 | 6.61E-65 | -1.69E-46 |
| MS.gene050426 | MS.gene33072 | -0.875747 | 2.41E-68 | -1.69E-46 |
| MS.gene050553 | MS.gene33072 | 0.800272 | 1.56E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene33072 | 0.831777 | 1.38E-55 | -1.69E-46 |
| MS.gene050625 | MS.gene33072 | 0.852385 | 4.78E-61 | -1.69E-46 |
| MS.gene050670 | MS.gene33072 | 0.906044 | 2.26E-80 | -1.69E-46 |
| MS.gene050747 | MS.gene33072 | 0.829836 | 4.12E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene33072 | 0.821804 | 3.32E-53 | -1.69E-46 |
| MS.gene05081 | MS.gene33072 | 0.852775 | 3.70E-61 | -1.69E-46 |
| MS.gene050950 | MS.gene33072 | 0.823212 | 1.56E-53 | -1.69E-46 |
| MS.gene050971 | MS.gene33072 | 0.813609 | 2.35E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene33072 | 0.856018 | 4.27E-62 | -1.69E-46 |
| MS.gene051208 | MS.gene33072 | 0.80311 | 4.08E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene33072 | 0.843457 | 1.39E-58 | -1.69E-46 |
| MS.gene051521 | MS.gene33072 | 0.812106 | 5.01E-51 | -1.69E-46 |
| MS.gene051525 | MS.gene33072 | 0.952599 | 1.71E-110 | -1.69E-46 |
| MS.gene051552 | MS.gene33072 | -0.837686 | 4.49E-57 | -1.69E-46 |
| MS.gene051582 | MS.gene33072 | 0.853494 | 2.30E-61 | -1.69E-46 |
| MS.gene051588 | MS.gene33072 | 0.829162 | 6.01E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene33072 | 0.816926 | 4.30E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene33072 | 0.864066 | 1.59E-64 | -1.69E-46 |
| MS.gene051941 | MS.gene33072 | 0.811417 | 7.07E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene33072 | -0.900409 | 7.54E-78 | -1.69E-46 |
| MS.gene052077 | MS.gene33072 | 0.811381 | 7.20E-51 | -1.69E-46 |
| MS.gene052128 | MS.gene33072 | -0.843997 | 9.93E-59 | -1.69E-46 |
| MS.gene052134 | MS.gene33072 | 0.857534 | 1.53E-62 | -1.69E-46 |
| MS.gene052135 | MS.gene33072 | 0.854401 | 1.26E-61 | -1.69E-46 |
| MS.gene052136 | MS.gene33072 | 0.830036 | 3.68E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene33072 | 0.840483 | 8.46E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene33072 | 0.874874 | 4.80E-68 | -1.69E-46 |
| MS.gene052310 | MS.gene33072 | 0.808371 | 3.20E-50 | -1.69E-46 |
| MS.gene052322 | MS.gene33072 | 0.834797 | 2.43E-56 | -1.69E-46 |
| MS.gene052340 | MS.gene33072 | 0.82656 | 2.54E-54 | -1.69E-46 |
| MS.gene052346 | MS.gene33072 | 0.879305 | 1.39E-69 | -1.69E-46 |
| MS.gene052414 | MS.gene33072 | 0.884391 | 2.00E-71 | -1.69E-46 |
| MS.gene052421 | MS.gene33072 | 0.843328 | 1.50E-58 | -1.69E-46 |
| MS.gene052469 | MS.gene33072 | 0.856843 | 2.45E-62 | -1.69E-46 |
| MS.gene052481 | MS.gene33072 | 0.864092 | 1.56E-64 | -1.69E-46 |
| MS.gene052484 | MS.gene33072 | 0.804351 | 2.25E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene33072 | 0.845152 | 4.85E-59 | -1.69E-46 |
| MS.gene052501 | MS.gene33072 | 0.857482 | 1.58E-62 | -1.69E-46 |
| MS.gene052505 | MS.gene33072 | 0.856169 | 3.86E-62 | -1.69E-46 |
| MS.gene052589 | MS.gene33072 | 0.806576 | 7.69E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene33072 | 0.802242 | 6.16E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene33072 | 0.892647 | 1.31E-74 | -1.69E-46 |
| MS.gene052999 | MS.gene33072 | 0.824383 | 8.32E-54 | -1.69E-46 |
| MS.gene053169 | MS.gene33072 | 0.87276 | 2.48E-67 | -1.69E-46 |
| MS.gene053318 | MS.gene33072 | 0.813226 | 2.85E-51 | -1.69E-46 |
| MS.gene053330 | MS.gene33072 | 0.845367 | 4.24E-59 | -1.69E-46 |
| MS.gene05335 | MS.gene33072 | 0.822352 | 2.48E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene33072 | 0.809669 | 1.69E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene33072 | 0.831972 | 1.23E-55 | -1.69E-46 |
| MS.gene053873 | MS.gene33072 | 0.807589 | 4.69E-50 | -1.69E-46 |
| MS.gene053928 | MS.gene33072 | 0.803196 | 3.91E-49 | -1.69E-46 |
| MS.gene054102 | MS.gene33072 | 0.820276 | 7.47E-53 | -1.69E-46 |
| MS.gene054107 | MS.gene33072 | 0.826003 | 3.44E-54 | -1.69E-46 |
| MS.gene054110 | MS.gene33072 | 0.810807 | 9.59E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene33072 | 0.858245 | 9.40E-63 | -1.69E-46 |
| MS.gene054349 | MS.gene33072 | 0.811994 | 5.30E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene33072 | 0.801245 | 9.86E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene33072 | 0.882919 | 6.95E-71 | -1.69E-46 |
| MS.gene054719 | MS.gene33072 | 0.868612 | 5.74E-66 | -1.69E-46 |
| MS.gene054742 | MS.gene33072 | -0.80404 | 2.61E-49 | -1.69E-46 |
| MS.gene054884 | MS.gene33072 | -0.836732 | 7.87E-57 | -1.69E-46 |
| MS.gene054917 | MS.gene33072 | 0.808316 | 3.29E-50 | -1.69E-46 |
| MS.gene054920 | MS.gene33072 | 0.838107 | 3.50E-57 | -1.69E-46 |
| MS.gene054927 | MS.gene33072 | 0.835324 | 1.79E-56 | -1.69E-46 |
| MS.gene05494 | MS.gene33072 | 0.811434 | 7.01E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene33072 | 0.806624 | 7.52E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene33072 | 0.847002 | 1.52E-59 | -1.69E-46 |
| MS.gene055159 | MS.gene33072 | -0.831605 | 1.52E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene33072 | 0.803348 | 3.64E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene33072 | 0.804078 | 2.57E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene33072 | 0.810304 | 1.23E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene33072 | 0.876532 | 1.30E-68 | -1.69E-46 |
| MS.gene055370 | MS.gene33072 | 0.832192 | 1.09E-55 | -1.69E-46 |
| MS.gene055539 | MS.gene33072 | 0.895219 | 1.18E-75 | -1.69E-46 |
| MS.gene05553 | MS.gene33072 | 0.870808 | 1.10E-66 | -1.69E-46 |
| MS.gene05556 | MS.gene33072 | 0.859622 | 3.64E-63 | -1.69E-46 |
| MS.gene055741 | MS.gene33072 | 0.884525 | 1.78E-71 | -1.69E-46 |
| MS.gene055744 | MS.gene33072 | 0.890579 | 8.67E-74 | -1.69E-46 |
| MS.gene055892 | MS.gene33072 | 0.813268 | 2.79E-51 | -1.69E-46 |
| MS.gene055893 | MS.gene33072 | 0.818166 | 2.26E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene33072 | 0.84302 | 1.81E-58 | -1.69E-46 |
| MS.gene055911 | MS.gene33072 | 0.849277 | 3.58E-60 | -1.69E-46 |
| MS.gene05594 | MS.gene33072 | 0.822905 | 1.84E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene33072 | 0.817349 | 3.45E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene33072 | 0.820635 | 6.18E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene33072 | 0.830246 | 3.27E-55 | -1.69E-46 |
| MS.gene056514 | MS.gene33072 | 0.880922 | 3.68E-70 | -1.69E-46 |
| MS.gene056633 | MS.gene33072 | 0.808929 | 2.43E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene33072 | 0.81628 | 6.00E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene33072 | 0.831971 | 1.23E-55 | -1.69E-46 |
| MS.gene056782 | MS.gene33072 | 0.82572 | 4.02E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene33072 | 0.824969 | 6.05E-54 | -1.69E-46 |
| MS.gene056877 | MS.gene33072 | 0.876477 | 1.35E-68 | -1.69E-46 |
| MS.gene056899 | MS.gene33072 | -0.807366 | 5.23E-50 | -1.69E-46 |
| MS.gene057019 | MS.gene33072 | 0.850918 | 1.24E-60 | -1.69E-46 |
| MS.gene057048 | MS.gene33072 | 0.825908 | 3.63E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene33072 | 0.880635 | 4.66E-70 | -1.69E-46 |
| MS.gene057196 | MS.gene33072 | 0.82612 | 3.23E-54 | -1.69E-46 |
| MS.gene057289 | MS.gene33072 | 0.82617 | 3.14E-54 | -1.69E-46 |
| MS.gene057332 | MS.gene33072 | 0.814203 | 1.74E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene33072 | 0.824266 | 8.86E-54 | -1.69E-46 |
| MS.gene057476 | MS.gene33072 | 0.836861 | 7.30E-57 | -1.69E-46 |
| MS.gene057658 | MS.gene33072 | 0.82218 | 2.72E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene33072 | 0.854322 | 1.33E-61 | -1.69E-46 |
| MS.gene057823 | MS.gene33072 | 0.854202 | 1.44E-61 | -1.69E-46 |
| MS.gene057825 | MS.gene33072 | 0.830269 | 3.23E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene33072 | 0.831388 | 1.72E-55 | -1.69E-46 |
| MS.gene057888 | MS.gene33072 | 0.839747 | 1.32E-57 | -1.69E-46 |
| MS.gene058007 | MS.gene33072 | 0.863151 | 3.05E-64 | -1.69E-46 |
| MS.gene05811 | MS.gene33072 | 0.804988 | 1.66E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene33072 | 0.813797 | 2.13E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene33072 | 0.806052 | 9.92E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene33072 | 0.808124 | 3.61E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene33072 | 0.821616 | 3.67E-53 | -1.69E-46 |
| MS.gene058376 | MS.gene33072 | 0.885079 | 1.11E-71 | -1.69E-46 |
| MS.gene05837 | MS.gene33072 | 0.810005 | 1.43E-50 | -1.69E-46 |
| MS.gene058418 | MS.gene33072 | -0.822223 | 2.66E-53 | -1.69E-46 |
| MS.gene058444 | MS.gene33072 | 0.934673 | 2.80E-96 | -1.69E-46 |
| MS.gene058700 | MS.gene33072 | 0.907625 | 4.14E-81 | -1.69E-46 |
| MS.gene058838 | MS.gene33072 | 0.831273 | 1.83E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene33072 | 0.834341 | 3.17E-56 | -1.69E-46 |
| MS.gene058948 | MS.gene33072 | 0.835919 | 1.27E-56 | -1.69E-46 |
| MS.gene059011 | MS.gene33072 | 0.827921 | 1.20E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene33072 | 0.816926 | 4.30E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene33072 | 0.817103 | 3.92E-52 | -1.69E-46 |
| MS.gene059082 | MS.gene33072 | 0.837892 | 3.97E-57 | -1.69E-46 |
| MS.gene059141 | MS.gene33072 | 0.854881 | 9.16E-62 | -1.69E-46 |
| MS.gene059247 | MS.gene33072 | 0.816038 | 6.79E-52 | -1.69E-46 |
| MS.gene059303 | MS.gene33072 | 0.826066 | 3.33E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene33072 | 0.900273 | 8.64E-78 | -1.69E-46 |
| MS.gene059462 | MS.gene33072 | 0.827878 | 1.23E-54 | -1.69E-46 |
| MS.gene059512 | MS.gene33072 | 0.85699 | 2.21E-62 | -1.69E-46 |
| MS.gene059683 | MS.gene33072 | 0.824232 | 9.02E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene33072 | 0.83762 | 4.67E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene33072 | 0.814459 | 1.52E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene33072 | 0.820819 | 5.61E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene33072 | 0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene059933 | MS.gene33072 | 0.800957 | 1.13E-48 | -1.69E-46 |
| MS.gene060087 | MS.gene33072 | -0.806218 | 9.15E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene33072 | 0.835003 | 2.16E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene33072 | 0.870477 | 1.42E-66 | -1.69E-46 |
| MS.gene060485 | MS.gene33072 | 0.833125 | 6.38E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene33072 | 0.819607 | 1.06E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene33072 | 0.844257 | 8.46E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene33072 | 0.831301 | 1.80E-55 | -1.69E-46 |
| MS.gene060986 | MS.gene33072 | 0.828458 | 8.89E-55 | -1.69E-46 |
| MS.gene061154 | MS.gene33072 | 0.905619 | 3.55E-80 | -1.69E-46 |
| MS.gene061214 | MS.gene33072 | 0.832213 | 1.07E-55 | -1.69E-46 |
| MS.gene061215 | MS.gene33072 | 0.831392 | 1.71E-55 | -1.69E-46 |
| MS.gene061231 | MS.gene33072 | 0.803611 | 3.21E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33072.t1 | MTR_1g014730 | 89.724 | 399 | 11 | 3 | 1 | 369 | 1 | 399 | 0.0 | 720 |
| MS.gene33072.t1 | MTR_1g014730 | 86.859 | 312 | 11 | 3 | 1 | 282 | 1 | 312 | 0.0 | 525 |
| MS.gene33072.t1 | MTR_8g070480 | 32.051 | 312 | 182 | 10 | 18 | 325 | 81 | 366 | 1.69e-42 | 153 |
| MS.gene33072.t1 | MTR_8g070480 | 32.051 | 312 | 182 | 10 | 18 | 325 | 81 | 366 | 2.51e-42 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33072.t1 | AT3G43540 | 64.722 | 360 | 121 | 2 | 11 | 369 | 19 | 373 | 1.05e-175 | 493 |
| MS.gene33072.t1 | AT3G43540 | 67.586 | 290 | 94 | 0 | 80 | 369 | 12 | 301 | 2.76e-155 | 439 |
| MS.gene33072.t1 | AT5G47860 | 30.645 | 248 | 151 | 5 | 53 | 299 | 100 | 327 | 1.32e-35 | 135 |
Find 71 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGATATCTTATAGAGTTAT+TGG | 0.155973 | 1.1:-6928366 | MS.gene33072:CDS |
| GCTATTCCTCAACTTACTTA+TGG | 0.167683 | 1.1:-6928505 | MS.gene33072:CDS |
| CAATGTCAAACACACATTAT+TGG | 0.223972 | 1.1:-6925128 | MS.gene33072:intron |
| TTTCTAGCTATCGAGTAAAT+TGG | 0.225245 | 1.1:+6926706 | None:intergenic |
| TTGGATACACTGCTGACATC+TGG | 0.290255 | 1.1:-6928248 | MS.gene33072:CDS |
| ATTGGATTTGCTTCCACTAT+TGG | 0.306024 | 1.1:+6926724 | None:intergenic |
| TGATCAAATGTCACATTATA+AGG | 0.308290 | 1.1:+6928314 | None:intergenic |
| AATGGTTCTGGCAAGGATTC+TGG | 0.311836 | 1.1:+6924703 | None:intergenic |
| CTATTCCTCAACTTACTTAT+GGG | 0.335315 | 1.1:-6928504 | MS.gene33072:intron |
| TGACAAGTTTCATTCTTGTT+TGG | 0.336611 | 1.1:-6928267 | MS.gene33072:CDS |
| AACTTACCTACTTGCCATCT+TGG | 0.343767 | 1.1:+6924782 | None:intergenic |
| CTTCCACTATTGGCATCATC+TGG | 0.351852 | 1.1:+6926734 | None:intergenic |
| TAAGGAACCGCCTCTGTTGC+TGG | 0.371759 | 1.1:+6927570 | None:intergenic |
| GAACCAGTCACTAATGGTTC+TGG | 0.372121 | 1.1:+6924691 | None:intergenic |
| CTATGACCAACAGAGAAAAT+AGG | 0.381688 | 1.1:+6928182 | None:intergenic |
| AAGCTGAGCAGGTGACAAAT+TGG | 0.383955 | 1.1:+6928214 | None:intergenic |
| CTCTCCCTTTGAAGAATACT+AGG | 0.391651 | 1.1:-6928771 | MS.gene33072:intron |
| ATTTGTTGATCAGCTGCCTT+TGG | 0.398100 | 1.1:-6925863 | MS.gene33072:CDS |
| ACGTTTGAACCAGTCACTAA+TGG | 0.412105 | 1.1:+6924685 | None:intergenic |
| ATGAATTTGATTATAGCTCT+TGG | 0.412859 | 1.1:+6928547 | None:intergenic |
| TTGTCACCTGCTCAGCTTGG+AGG | 0.413742 | 1.1:-6928209 | MS.gene33072:CDS |
| TTTGATTATAGCTCTTGGTT+TGG | 0.424188 | 1.1:+6928552 | None:intergenic |
| AAGCCTCGTGTGGAGTCCTT+TGG | 0.443070 | 1.1:-6924957 | MS.gene33072:CDS |
| GGCGGTTCCTTACTTTGAGC+AGG | 0.447793 | 1.1:-6927559 | MS.gene33072:intron |
| GTTAATACCTGCTCAAAGTA+AGG | 0.449253 | 1.1:+6927552 | None:intergenic |
| GAGAGTGAATTTGAAATTTG+AGG | 0.453792 | 1.1:+6928789 | None:intergenic |
| GATTATAGCTCTTGGTTTGG+TGG | 0.459125 | 1.1:+6928555 | None:intergenic |
| TTCTGTTGGATCAATTCTGC+AGG | 0.463556 | 1.1:-6925920 | MS.gene33072:CDS |
| CCTCGTGTGGAGTCCTTTGG+TGG | 0.479547 | 1.1:-6924954 | MS.gene33072:CDS |
| AGAGCTATAATCAAATTCAT+TGG | 0.482982 | 1.1:-6928544 | MS.gene33072:CDS |
| TGGATACACTGCTGACATCT+GGG | 0.483570 | 1.1:-6928247 | MS.gene33072:CDS |
| ACAACACTTCACAATGGAAA+TGG | 0.484931 | 1.1:-6928815 | None:intergenic |
| ATAGCTTCTGATATGTATGT+TGG | 0.489993 | 1.1:-6928643 | MS.gene33072:CDS |
| CAGCCAGATGATGCCAATAG+TGG | 0.500596 | 1.1:-6926737 | MS.gene33072:CDS |
| GGAAGACCTCCAAGCTGAGC+AGG | 0.505657 | 1.1:+6928203 | None:intergenic |
| CTTTGAGCTACAGCATCTGC+TGG | 0.508415 | 1.1:+6924752 | None:intergenic |
| AATTTGTCACCTGCTCAGCT+TGG | 0.510625 | 1.1:-6928212 | MS.gene33072:CDS |
| TTCATTGGTGGTGCTTTCGT+TGG | 0.512277 | 1.1:-6928529 | MS.gene33072:CDS |
| GCTCTTGGTTTGGTGGAAGT+AGG | 0.513990 | 1.1:+6928562 | None:intergenic |
| AAGATGGTTCTTGATTCTGT+TGG | 0.514302 | 1.1:-6925934 | MS.gene33072:CDS |
| GGTTTGGTGGAAGTAGGTGG+TGG | 0.514744 | 1.1:+6928568 | None:intergenic |
| GGCATCATCTGGCTGACAGC+AGG | 0.516429 | 1.1:+6926745 | None:intergenic |
| ATTTGTTTCATCAATTGTGT+CGG | 0.531303 | 1.1:+6924998 | None:intergenic |
| TCTTATAGAGTTATTGGCTA+AGG | 0.533548 | 1.1:-6928360 | MS.gene33072:CDS |
| CTTGGTTTGGTGGAAGTAGG+TGG | 0.537073 | 1.1:+6928565 | None:intergenic |
| AAGTACCTAGTATTCTTCAA+AGG | 0.548004 | 1.1:+6928766 | None:intergenic |
| CCACATCACACCATGCATCC+AGG | 0.548875 | 1.1:-6924901 | MS.gene33072:intron |
| AGTACCTAGTATTCTTCAAA+GGG | 0.551616 | 1.1:+6928767 | None:intergenic |
| ATAGAGTTATTGGCTAAGGA+AGG | 0.552106 | 1.1:-6928356 | MS.gene33072:CDS |
| TTGCCAGAACCATTAGTGAC+TGG | 0.559081 | 1.1:-6924694 | MS.gene33072:CDS |
| GCTATAATCAAATTCATTGG+TGG | 0.569849 | 1.1:-6928541 | MS.gene33072:CDS |
| CAGCAGATGCTGTAGCTCAA+AGG | 0.573497 | 1.1:-6924751 | MS.gene33072:CDS |
| CCTGGATGCATGGTGTGATG+TGG | 0.584311 | 1.1:+6924901 | None:intergenic |
| GCTGCCTTTGGTAATGAATG+AGG | 0.584490 | 1.1:-6925851 | MS.gene33072:intron |
| CTCGTGTGGAGTCCTTTGGT+GGG | 0.599565 | 1.1:-6924953 | MS.gene33072:CDS |
| TGTAGGAGATGCATGGAAGA+TGG | 0.609050 | 1.1:-6925950 | MS.gene33072:intron |
| CAGGAACCAAGATGGCAAGT+AGG | 0.610138 | 1.1:-6924788 | MS.gene33072:CDS |
| GCACTTCTTCAAGTACTCAC+AGG | 0.613217 | 1.1:-6927903 | MS.gene33072:CDS |
| ACTGAAATCAGGAACCAAGA+TGG | 0.615679 | 1.1:-6924796 | MS.gene33072:intron |
| CAATACCCATAAGTAAGTTG+AGG | 0.622732 | 1.1:+6928499 | None:intergenic |
| GCAGGTGACAAATTGGATTG+AGG | 0.624270 | 1.1:+6928221 | None:intergenic |
| AGAAACACTCAAGCCTCGTG+TGG | 0.629689 | 1.1:-6924967 | MS.gene33072:CDS |
| AGTCACTAATGGTTCTGGCA+AGG | 0.630771 | 1.1:+6924696 | None:intergenic |
| AATTCTGCAGGAAAGCGAGA+AGG | 0.631851 | 1.1:-6925908 | MS.gene33072:CDS |
| CAACGTGTGTAGGAGATGCA+TGG | 0.637363 | 1.1:-6925957 | MS.gene33072:intron |
| CATACCTCATTCATTACCAA+AGG | 0.639421 | 1.1:+6925847 | None:intergenic |
| CAACAACAGACCAGCAACAG+AGG | 0.640280 | 1.1:-6927580 | MS.gene33072:CDS |
| CCACCAAAGGACTCCACACG+AGG | 0.646706 | 1.1:+6924954 | None:intergenic |
| TCGATAGCTAGAAATGCACC+AGG | 0.665256 | 1.1:-6926697 | MS.gene33072:intron |
| TCTCTCTGTCAGGTTACACA+AGG | 0.677567 | 1.1:-6925208 | MS.gene33072:intron |
| CAACAGACCAGCAACAGAGG+CGG | 0.696154 | 1.1:-6927577 | MS.gene33072:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACATTAAAATAAACAAAA+GGG | + | chr1.1:6925018-6925037 | None:intergenic | 10.0% |
| !! | TTTACATTAAAATAAACAAA+AGG | + | chr1.1:6925019-6925038 | None:intergenic | 10.0% |
| !! | AATGAAATGAAATGATTTAT+AGG | + | chr1.1:6928619-6928638 | None:intergenic | 15.0% |
| !! | GATTATAAAACTTTATAATC+TGG | - | chr1.1:6925704-6925723 | MS.gene33072:intron | 15.0% |
| !!! | AAACAATGTTTTATACTTTT+AGG | + | chr1.1:6926144-6926163 | None:intergenic | 15.0% |
| !!! | AAAGTTAAAATTTAGTTTGA+AGG | - | chr1.1:6926101-6926120 | MS.gene33072:intron | 15.0% |
| !!! | TAAAAGTATAAAACATTGTT+TGG | - | chr1.1:6926143-6926162 | MS.gene33072:intron | 15.0% |
| !!! | TTCAATAATAACTAGTATTT+TGG | - | chr1.1:6927691-6927710 | MS.gene33072:intron | 15.0% |
| !!! | TTTCTTTTTCTTTTTTTTGA+GGG | - | chr1.1:6926906-6926925 | MS.gene33072:intron | 15.0% |
| !!! | TTTTCTTTTTCTTTTTTTTG+AGG | - | chr1.1:6926905-6926924 | MS.gene33072:intron | 15.0% |
| !! | AAAAATCAATCACTCTATTA+AGG | + | chr1.1:6926010-6926029 | None:intergenic | 20.0% |
| !! | AAAAGTAAGTTATGAGATAT+AGG | + | chr1.1:6928385-6928404 | None:intergenic | 20.0% |
| !! | AAAGTAAGTTATGAGATATA+GGG | + | chr1.1:6928384-6928403 | None:intergenic | 20.0% |
| !! | AAATGAAATGATTTATAGGA+TGG | + | chr1.1:6928615-6928634 | None:intergenic | 20.0% |
| !! | CTATTGTTTGAATAAATTAG+AGG | - | chr1.1:6927172-6927191 | MS.gene33072:intron | 20.0% |
| !! | CTTATAGTTATATCAATTCA+AGG | - | chr1.1:6925818-6925837 | MS.gene33072:intron | 20.0% |
| !! | TAGATATCTTATAGAGTTAT+TGG | - | chr1.1:6925109-6925128 | MS.gene33072:intron | 20.0% |
| !! | TATTAGTAATTCTTAATGAG+AGG | - | chr1.1:6927370-6927389 | MS.gene33072:intron | 20.0% |
| !! | TCAATTAGTATAAGCATTAT+CGG | - | chr1.1:6926442-6926461 | MS.gene33072:intron | 20.0% |
| !! | TCTCATTAAGAATTACTAAT+AGG | + | chr1.1:6927371-6927390 | None:intergenic | 20.0% |
| !! | TGTGTAAATATATATTATCC+AGG | + | chr1.1:6926197-6926216 | None:intergenic | 20.0% |
| !! | TTTACACAAAGTAATTAAAG+TGG | - | chr1.1:6926209-6926228 | MS.gene33072:intron | 20.0% |
| !! | TTTCATAACAAAACTTTATG+CGG | + | chr1.1:6926084-6926103 | None:intergenic | 20.0% |
| !!! | AAGTTTGATTTTTTTCATGT+TGG | - | chr1.1:6925037-6925056 | MS.gene33072:intron | 20.0% |
| !!! | ATCTAAGATTCTTTAGTATA+GGG | - | chr1.1:6925982-6926001 | MS.gene33072:intron | 20.0% |
| !!! | TATCTAAGATTCTTTAGTAT+AGG | - | chr1.1:6925981-6926000 | MS.gene33072:intron | 20.0% |
| !!! | TCATTTTCTCAAATTATCAT+TGG | - | chr1.1:6925424-6925443 | MS.gene33072:intron | 20.0% |
| !!! | TGTTCGAATGTTTTAATTTA+TGG | - | chr1.1:6925745-6925764 | MS.gene33072:intron | 20.0% |
| !!! | TTAAAATTTAGTTTGAAGGA+TGG | - | chr1.1:6926105-6926124 | MS.gene33072:intron | 20.0% |
| !!! | TTCTTTTTCTTTTTTTTGAG+GGG | - | chr1.1:6926907-6926926 | MS.gene33072:intron | 20.0% |
| ! | AAAGTAATTAAAGTGGTGAA+TGG | - | chr1.1:6926216-6926235 | MS.gene33072:intron | 25.0% |
| ! | AACAATAATAAAGCACATTC+AGG | + | chr1.1:6926297-6926316 | None:intergenic | 25.0% |
| ! | AAGGGATTATAAACTTCAAA+TGG | + | chr1.1:6927896-6927915 | None:intergenic | 25.0% |
| ! | AATCTCTAAATTCACTACAT+AGG | + | chr1.1:6927033-6927052 | None:intergenic | 25.0% |
| ! | AGAGCTATAATCAAATTCAT+TGG | - | chr1.1:6924931-6924950 | MS.gene33072:CDS | 25.0% |
| ! | ATGAATTTGATTATAGCTCT+TGG | + | chr1.1:6924931-6924950 | None:intergenic | 25.0% |
| ! | ATTTGTTTCATCAATTGTGT+CGG | + | chr1.1:6928480-6928499 | None:intergenic | 25.0% |
| ! | CATTAAGAATTACTAATAGG+AGG | + | chr1.1:6927368-6927387 | None:intergenic | 25.0% |
| ! | CATTTCAGAGATTAACTATA+AGG | - | chr1.1:6927452-6927471 | MS.gene33072:intron | 25.0% |
| ! | CTAAATATAACCACATATAC+TGG | + | chr1.1:6925399-6925418 | None:intergenic | 25.0% |
| ! | GCTTTCTTAAGCATATTTAT+AGG | + | chr1.1:6926379-6926398 | None:intergenic | 25.0% |
| ! | GTATATCTGTGCAAATAAAT+GGG | - | chr1.1:6926350-6926369 | MS.gene33072:intron | 25.0% |
| ! | GTATGAAGATGAATGATATA+AGG | + | chr1.1:6926626-6926645 | None:intergenic | 25.0% |
| ! | TATCTATCTATGAACAAAAG+AGG | - | chr1.1:6925660-6925679 | MS.gene33072:intron | 25.0% |
| ! | TGATCAAATGTCACATTATA+AGG | + | chr1.1:6925164-6925183 | None:intergenic | 25.0% |
| ! | TGTATATCTGTGCAAATAAA+TGG | - | chr1.1:6926349-6926368 | MS.gene33072:intron | 25.0% |
| ! | TGTTTGAATAAATTAGAGGA+AGG | - | chr1.1:6927176-6927195 | MS.gene33072:intron | 25.0% |
| ! | TTAAAATCAGTTAATGCGAT+AGG | - | chr1.1:6927112-6927131 | MS.gene33072:intron | 25.0% |
| !! | AAAGCTTATGATGATCTTTT+TGG | - | chr1.1:6927929-6927948 | MS.gene33072:intron | 25.0% |
| !! | AATACTGGTTATGAATATGT+TGG | - | chr1.1:6926264-6926283 | MS.gene33072:intron | 25.0% |
| !! | CAGTAATTTGTAAAAAGAGT+GGG | + | chr1.1:6928181-6928200 | None:intergenic | 25.0% |
| !! | CTTCCTGACTTAATTTTATA+TGG | - | chr1.1:6926600-6926619 | MS.gene33072:intron | 25.0% |
| !! | TTGTTTTCAATTTGTAGCAA+TGG | - | chr1.1:6925548-6925567 | MS.gene33072:intron | 25.0% |
| !! | TTTGAAGTTTATAATCCCTT+AGG | - | chr1.1:6927896-6927915 | MS.gene33072:CDS | 25.0% |
| !!! | AATAGAGTGATTGATTTTTG+TGG | - | chr1.1:6926011-6926030 | MS.gene33072:intron | 25.0% |
| !!! | CATAACTTACTTTTGAAAGA+CGG | - | chr1.1:6928391-6928410 | MS.gene33072:intron | 25.0% |
| !!! | CATTTTTTGAATGTACAGTT+TGG | - | chr1.1:6926818-6926837 | MS.gene33072:intron | 25.0% |
| !!! | TATGTGTTAACTGTTGATTT+TGG | - | chr1.1:6927647-6927666 | MS.gene33072:intron | 25.0% |
| AACAATATGTCAGAGAGATT+TGG | - | chr1.1:6927282-6927301 | MS.gene33072:intron | 30.0% | |
| AAGTACCTAGTATTCTTCAA+AGG | + | chr1.1:6924712-6924731 | None:intergenic | 30.0% | |
| AATCTAAGCATGCTAAATAC+TGG | - | chr1.1:6926249-6926268 | MS.gene33072:intron | 30.0% | |
| AGGCCATATAAAATTAAGTC+AGG | + | chr1.1:6926606-6926625 | None:intergenic | 30.0% | |
| AGTACCTAGTATTCTTCAAA+GGG | + | chr1.1:6924711-6924730 | None:intergenic | 30.0% | |
| ATAGAAAAAGTAGGATTGAG+TGG | - | chr1.1:6928548-6928567 | MS.gene33072:CDS | 30.0% | |
| ATAGCTTCTGATATGTATGT+TGG | - | chr1.1:6924832-6924851 | MS.gene33072:intron | 30.0% | |
| ATTCAAGGAATGTGATGAAA+AGG | - | chr1.1:6925833-6925852 | MS.gene33072:intron | 30.0% | |
| ATTGAATGTAACACATGTGT+TGG | - | chr1.1:6928040-6928059 | MS.gene33072:intron | 30.0% | |
| ATTGCATCTGCATGTATAAA+TGG | + | chr1.1:6926417-6926436 | None:intergenic | 30.0% | |
| CAATGTCAAACACACATTAT+TGG | - | chr1.1:6928347-6928366 | MS.gene33072:CDS | 30.0% | |
| CACTACATAGGAAATATAAC+AGG | + | chr1.1:6927021-6927040 | None:intergenic | 30.0% | |
| CAGAAAAATAACCAAACCTT+AGG | + | chr1.1:6925620-6925639 | None:intergenic | 30.0% | |
| CAGAATTACATTATTAGACC+AGG | + | chr1.1:6927089-6927108 | None:intergenic | 30.0% | |
| CTATTCCTCAACTTACTTAT+GGG | - | chr1.1:6924971-6924990 | MS.gene33072:CDS | 30.0% | |
| GCTATAATCAAATTCATTGG+TGG | - | chr1.1:6924934-6924953 | MS.gene33072:CDS | 30.0% | |
| TACCAATCTTACTGGAATTA+AGG | - | chr1.1:6925506-6925525 | MS.gene33072:intron | 30.0% | |
| TACCTTAATTCCAGTAAGAT+TGG | + | chr1.1:6925511-6925530 | None:intergenic | 30.0% | |
| TAGTTTAGTACCAATCTTAC+TGG | - | chr1.1:6925498-6925517 | MS.gene33072:intron | 30.0% | |
| TCATAGATCATAATAGACCA+TGG | + | chr1.1:6927955-6927974 | None:intergenic | 30.0% | |
| TGACAAGTTTCATTCTTGTT+TGG | - | chr1.1:6925208-6925227 | MS.gene33072:intron | 30.0% | |
| TGTTGAATGAATTTGAGTGT+TGG | + | chr1.1:6924759-6924778 | None:intergenic | 30.0% | |
| TTTGATTATAGCTCTTGGTT+TGG | + | chr1.1:6924926-6924945 | None:intergenic | 30.0% | |
| ! | AAGAAAAGAACACTTCCTTT+TGG | + | chr1.1:6926892-6926911 | None:intergenic | 30.0% |
| ! | ACATTAAATTTTGCTGCTGA+TGG | - | chr1.1:6926514-6926533 | MS.gene33072:intron | 30.0% |
| ! | CCACTCTTTTTACAAATTAC+TGG | - | chr1.1:6928179-6928198 | MS.gene33072:intron | 30.0% |
| ! | CCAGTAATTTGTAAAAAGAG+TGG | + | chr1.1:6928182-6928201 | None:intergenic | 30.0% |
| ! | GAAAAGGTATGTATCTCTTA+TGG | - | chr1.1:6925849-6925868 | MS.gene33072:intron | 30.0% |
| ! | GAGAGTGAATTTGAAATTTG+AGG | + | chr1.1:6924689-6924708 | None:intergenic | 30.0% |
| ! | GATTTTTGTGGTTGTGATTA+AGG | - | chr1.1:6926023-6926042 | MS.gene33072:intron | 30.0% |
| ! | GTCTTTCTTTTTGTCTCTTA+AGG | - | chr1.1:6928442-6928461 | MS.gene33072:intron | 30.0% |
| ! | TAAACTTTCCAGTAAGTTGA+TGG | + | chr1.1:6926472-6926491 | None:intergenic | 30.0% |
| ! | TACTGATGAAGTTTTCCAAA+AGG | - | chr1.1:6926874-6926893 | MS.gene33072:intron | 30.0% |
| ! | TCTTATAGAGTTATTGGCTA+AGG | - | chr1.1:6925115-6925134 | MS.gene33072:intron | 30.0% |
| ! | TGTTCTAAATTCAAAAGTCC+TGG | - | chr1.1:6927068-6927087 | MS.gene33072:intron | 30.0% |
| ! | TTGACATTTTGTGTTTAACC+TGG | - | chr1.1:6926176-6926195 | MS.gene33072:intron | 30.0% |
| !! | ATTTTCTGAGAAACTACCTA+AGG | - | chr1.1:6925601-6925620 | MS.gene33072:intron | 30.0% |
| !! | GTTTTGAATCACAATTGACA+CGG | + | chr1.1:6926684-6926703 | None:intergenic | 30.0% |
| !! | TTTCTAGCTATCGAGTAAAT+TGG | + | chr1.1:6926772-6926791 | None:intergenic | 30.0% |
| !!! | AGCTTTTATAGATTAGCCTA+AGG | + | chr1.1:6927915-6927934 | None:intergenic | 30.0% |
| !!! | CTAAGGTTTGGTTATTTTTC+TGG | - | chr1.1:6925618-6925637 | MS.gene33072:intron | 30.0% |
| !!! | GCTTTTATAGATTAGCCTAA+GGG | + | chr1.1:6927914-6927933 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTTTGAGGGGAAA+AGG | - | chr1.1:6926913-6926932 | MS.gene33072:intron | 30.0% |
| !!! | TTGCTGTTGGTTTTTTCTAT+AGG | - | chr1.1:6927721-6927740 | MS.gene33072:intron | 30.0% |
| AAGATGGTTCTTGATTCTGT+TGG | - | chr1.1:6927541-6927560 | MS.gene33072:intron | 35.0% | |
| AGAATTACTAATAGGAGGAG+AGG | + | chr1.1:6927363-6927382 | None:intergenic | 35.0% | |
| AGGTACTTGTCTATGTTTCA+TGG | - | chr1.1:6924724-6924743 | MS.gene33072:CDS | 35.0% | |
| AGGTATGTATCTCTTATGGA+AGG | - | chr1.1:6925853-6925872 | MS.gene33072:CDS | 35.0% | |
| ATTAAAGTGGTGAATGGTGA+TGG | - | chr1.1:6926222-6926241 | MS.gene33072:intron | 35.0% | |
| CAATACCCATAAGTAAGTTG+AGG | + | chr1.1:6924979-6924998 | None:intergenic | 35.0% | |
| CACATTCTTGTGGAATTCAT+TGG | - | chr1.1:6927398-6927417 | MS.gene33072:intron | 35.0% | |
| CATACCTCATTCATTACCAA+AGG | + | chr1.1:6927631-6927650 | None:intergenic | 35.0% | |
| CATAGGAAATATAACAGGAG+TGG | + | chr1.1:6927016-6927035 | None:intergenic | 35.0% | |
| CGAAATATCAATGTCGTGTT+TGG | - | chr1.1:6925450-6925469 | MS.gene33072:intron | 35.0% | |
| CTATGACCAACAGAGAAAAT+AGG | + | chr1.1:6925296-6925315 | None:intergenic | 35.0% | |
| GCTATTCCTCAACTTACTTA+TGG | - | chr1.1:6924970-6924989 | MS.gene33072:CDS | 35.0% | |
| GGCAAATCTTAGTAAGTTTG+TGG | - | chr1.1:6927742-6927761 | MS.gene33072:intron | 35.0% | |
| GTTAATACCTGCTCAAAGTA+AGG | + | chr1.1:6925926-6925945 | None:intergenic | 35.0% | |
| TAACAATATTTGTCCCACGA+AGG | + | chr1.1:6927847-6927866 | None:intergenic | 35.0% | |
| TACTGGACAGTTAGAGTAAA+GGG | + | chr1.1:6926552-6926571 | None:intergenic | 35.0% | |
| TGTATATATCTCTCTCTGTC+AGG | - | chr1.1:6928257-6928276 | MS.gene33072:CDS | 35.0% | |
| TTCAAAAAATGCGCAATCTC+AGG | + | chr1.1:6926809-6926828 | None:intergenic | 35.0% | |
| ! | AAGAGGCTTTTATTGAGACA+TGG | - | chr1.1:6925677-6925696 | MS.gene33072:intron | 35.0% |
| ! | AAGCAATCACGATTTTCAGA+TGG | + | chr1.1:6928315-6928334 | None:intergenic | 35.0% |
| ! | AGGAAGCATGTTTATTTGAG+TGG | + | chr1.1:6926586-6926605 | None:intergenic | 35.0% |
| ! | ATAGAGTTATTGGCTAAGGA+AGG | - | chr1.1:6925119-6925138 | MS.gene33072:intron | 35.0% |
| ! | ATTGGATTTGCTTCCACTAT+TGG | + | chr1.1:6926754-6926773 | None:intergenic | 35.0% |
| ! | CTATTTTCTCTGTTGGTCAT+AGG | - | chr1.1:6925294-6925313 | MS.gene33072:intron | 35.0% |
| ! | TGTAACACATGTGTTGGTAA+CGG | - | chr1.1:6928046-6928065 | MS.gene33072:intron | 35.0% |
| ! | TTTTGGTCAGATATTGCTGT+TGG | - | chr1.1:6927708-6927727 | MS.gene33072:intron | 35.0% |
| ! | TTTTTCTATTGTCCCACCAA+AGG | + | chr1.1:6928537-6928556 | None:intergenic | 35.0% |
| !! | AAAGTCAGTTTTGACCTTCT+CGG | - | chr1.1:6927337-6927356 | MS.gene33072:intron | 35.0% |
| !! | ACTGACTTTGGTCAGTTTTA+TGG | + | chr1.1:6927326-6927345 | None:intergenic | 35.0% |
| !! | GTTGCTTCTTTTTCACTGAT+TGG | - | chr1.1:6928649-6928668 | MS.gene33072:CDS | 35.0% |
| !! | TATGATGATCTTTTTGGCCA+TGG | - | chr1.1:6927935-6927954 | MS.gene33072:intron | 35.0% |
| !! | TTAGTTTCTGAGATCAAACC+CGG | - | chr1.1:6927770-6927789 | MS.gene33072:intron | 35.0% |
| !!! | ACAATGAAGGAGTTTTAAGC+CGG | + | chr1.1:6927801-6927820 | None:intergenic | 35.0% |
| !!! | TAAGGAAGGTTTTGTTGTTG+TGG | - | chr1.1:6925133-6925152 | MS.gene33072:CDS | 35.0% |
| !!! | TTCAAACGTTTTGAGGATTG+AGG | - | chr1.1:6928804-6928823 | MS.gene33072:CDS | 35.0% |
| AACTTACCTACTTGCCATCT+TGG | + | chr1.1:6928696-6928715 | None:intergenic | 40.0% | |
| ACGTTTGAACCAGTCACTAA+TGG | + | chr1.1:6928793-6928812 | None:intergenic | 40.0% | |
| ACTGAAATCAGGAACCAAGA+TGG | - | chr1.1:6928679-6928698 | MS.gene33072:intron | 40.0% | |
| ACTGGACAGTTAGAGTAAAG+GGG | + | chr1.1:6926551-6926570 | None:intergenic | 40.0% | |
| AGAGGTCTAACACATTCTTG+TGG | - | chr1.1:6927388-6927407 | MS.gene33072:intron | 40.0% | |
| CTGAGAAACTACCTAAGGTT+TGG | - | chr1.1:6925606-6925625 | MS.gene33072:intron | 40.0% | |
| GCAAGGCATATAGAGTCTAT+TGG | + | chr1.1:6926055-6926074 | None:intergenic | 40.0% | |
| GGTGGGACAATAGAAAAAGT+AGG | - | chr1.1:6928539-6928558 | MS.gene33072:CDS | 40.0% | |
| GTACTGGACAGTTAGAGTAA+AGG | + | chr1.1:6926553-6926572 | None:intergenic | 40.0% | |
| TCTAAGTGACACCTAGACTT+CGG | + | chr1.1:6928092-6928111 | None:intergenic | 40.0% | |
| TGACAAGACACCAGTATATG+TGG | - | chr1.1:6925386-6925405 | MS.gene33072:intron | 40.0% | |
| TTCCTTGCAAGACGTATGTT+GGG | + | chr1.1:6928136-6928155 | None:intergenic | 40.0% | |
| TTCTGTTGGATCAATTCTGC+AGG | - | chr1.1:6927555-6927574 | MS.gene33072:intron | 40.0% | |
| TTTCCTTGCAAGACGTATGT+TGG | + | chr1.1:6928137-6928156 | None:intergenic | 40.0% | |
| ! | AGAAGTTTTACCTGGATGCA+TGG | + | chr1.1:6928587-6928606 | None:intergenic | 40.0% |
| ! | AGATACCAGTTCTAGCAGAA+TGG | + | chr1.1:6927154-6927173 | None:intergenic | 40.0% |
| ! | AGGAGTGGTAATGAATGTGT+AGG | + | chr1.1:6927001-6927020 | None:intergenic | 40.0% |
| ! | ATTTGTTGATCAGCTGCCTT+TGG | - | chr1.1:6927612-6927631 | MS.gene33072:intron | 40.0% |
| ! | CTCTCCCTTTGAAGAATACT+AGG | - | chr1.1:6924704-6924723 | MS.gene33072:CDS | 40.0% |
| ! | GAGAAGGTCAAAACTGACTT+TGG | + | chr1.1:6927338-6927357 | None:intergenic | 40.0% |
| ! | GGTCTTCCTATTTTCTCTGT+TGG | - | chr1.1:6925287-6925306 | MS.gene33072:intron | 40.0% |
| ! | GTACTGACACTTCAGATTCA+AGG | - | chr1.1:6925327-6925346 | MS.gene33072:intron | 40.0% |
| ! | TCACGATTTTCAGATGGTGT+TGG | + | chr1.1:6928309-6928328 | None:intergenic | 40.0% |
| !! | GATTATAGCTCTTGGTTTGG+TGG | + | chr1.1:6924923-6924942 | None:intergenic | 40.0% |
| !! | TAGTTTCTGAGATCAAACCC+GGG | - | chr1.1:6927771-6927790 | MS.gene33072:intron | 40.0% |
| !! | TGACTGGTTCAAACGTTTTG+AGG | - | chr1.1:6928797-6928816 | MS.gene33072:CDS | 40.0% |
| !! | TTTTGAAAGACGGCTAGCAT+TGG | - | chr1.1:6928401-6928420 | MS.gene33072:intron | 40.0% |
| !!! | GGTTATTTTTCTGGCTGCTA+GGG | - | chr1.1:6925627-6925646 | MS.gene33072:intron | 40.0% |
| !!! | TGGTTATTTTTCTGGCTGCT+AGG | - | chr1.1:6925626-6925645 | MS.gene33072:intron | 40.0% |
| AAGCTGAGCAGGTGACAAAT+TGG | + | chr1.1:6925264-6925283 | None:intergenic | 45.0% | |
| AATTCTGCAGGAAAGCGAGA+AGG | - | chr1.1:6927567-6927586 | MS.gene33072:CDS | 45.0% | |
| AATTTGTCACCTGCTCAGCT+TGG | - | chr1.1:6925263-6925282 | MS.gene33072:intron | 45.0% | |
| ACAAAACTTTATGCGGCGAC+TGG | + | chr1.1:6926077-6926096 | None:intergenic | 45.0% | |
| ATGTCATCTGCAACGTGTGT+AGG | - | chr1.1:6927508-6927527 | MS.gene33072:intron | 45.0% | |
| CTCAACCATTCTGCTAGAAC+TGG | - | chr1.1:6927146-6927165 | MS.gene33072:intron | 45.0% | |
| CTTCAGATTCAAGGCGTATC+CGG | - | chr1.1:6925336-6925355 | MS.gene33072:intron | 45.0% | |
| CTTCCACTATTGGCATCATC+TGG | + | chr1.1:6926744-6926763 | None:intergenic | 45.0% | |
| GAACCAGTCACTAATGGTTC+TGG | + | chr1.1:6928787-6928806 | None:intergenic | 45.0% | |
| GCACTTCTTCAAGTACTCAC+AGG | - | chr1.1:6925572-6925591 | MS.gene33072:intron | 45.0% | |
| GCAGGTGACAAATTGGATTG+AGG | + | chr1.1:6925257-6925276 | None:intergenic | 45.0% | |
| GGTGAGATAAGGGACAATGA+AGG | + | chr1.1:6927814-6927833 | None:intergenic | 45.0% | |
| TCGATAGCTAGAAATGCACC+AGG | - | chr1.1:6926778-6926797 | MS.gene33072:intron | 45.0% | |
| TCGGCATACCATCAACTTAC+TGG | - | chr1.1:6926461-6926480 | MS.gene33072:intron | 45.0% | |
| TCTCTCTGTCAGGTTACACA+AGG | - | chr1.1:6928267-6928286 | MS.gene33072:CDS | 45.0% | |
| TGGATACACTGCTGACATCT+GGG | - | chr1.1:6925228-6925247 | MS.gene33072:intron | 45.0% | |
| TGTAGGAGATGCATGGAAGA+TGG | - | chr1.1:6927525-6927544 | MS.gene33072:intron | 45.0% | |
| TTGCCAGAACCATTAGTGAC+TGG | - | chr1.1:6928781-6928800 | MS.gene33072:CDS | 45.0% | |
| TTGGATACACTGCTGACATC+TGG | - | chr1.1:6925227-6925246 | MS.gene33072:intron | 45.0% | |
| ! | TGGTGCAGAGAAGTTTTACC+TGG | + | chr1.1:6928595-6928614 | None:intergenic | 45.0% |
| !! | AATGGTTCTGGCAAGGATTC+TGG | + | chr1.1:6928775-6928794 | None:intergenic | 45.0% |
| !! | AGTCACTAATGGTTCTGGCA+AGG | + | chr1.1:6928782-6928801 | None:intergenic | 45.0% |
| !! | GCTGCCTTTGGTAATGAATG+AGG | - | chr1.1:6927624-6927643 | MS.gene33072:intron | 45.0% |
| !! | TAGCTCGGTTGGTGAGATAA+GGG | + | chr1.1:6927824-6927843 | None:intergenic | 45.0% |
| !! | TTCATTGGTGGTGCTTTCGT+TGG | - | chr1.1:6924946-6924965 | MS.gene33072:CDS | 45.0% |
| !!! | ATGAAGGAGTTTTAAGCCGG+AGG | + | chr1.1:6927798-6927817 | None:intergenic | 45.0% |
| !!! | GGAAGGTTTTGTTGTTGTGG+TGG | - | chr1.1:6925136-6925155 | MS.gene33072:CDS | 45.0% |
| !!! | CTATTTTATAAAATTATTAT+CGG | + | chr1.1:6928015-6928034 | None:intergenic | 5.0% |
| ACACCTACAGTCCGAAGTCT+AGG | - | chr1.1:6928078-6928097 | MS.gene33072:intron | 50.0% | |
| ACACCTAGACTTCGGACTGT+AGG | + | chr1.1:6928084-6928103 | None:intergenic | 50.0% | |
| AGAAACACTCAAGCCTCGTG+TGG | - | chr1.1:6928508-6928527 | MS.gene33072:CDS | 50.0% | |
| AGCCCAACATACGTCTTGCA+AGG | - | chr1.1:6928131-6928150 | MS.gene33072:intron | 50.0% | |
| ATCCGGTGTTCGACACATGT+CGG | - | chr1.1:6925353-6925372 | MS.gene33072:intron | 50.0% | |
| CAACAACAGACCAGCAACAG+AGG | - | chr1.1:6925895-6925914 | MS.gene33072:CDS | 50.0% | |
| CAACGTGTGTAGGAGATGCA+TGG | - | chr1.1:6927518-6927537 | MS.gene33072:intron | 50.0% | |
| CAGCAGATGCTGTAGCTCAA+AGG | - | chr1.1:6928724-6928743 | MS.gene33072:intron | 50.0% | |
| CAGCCAGATGATGCCAATAG+TGG | - | chr1.1:6926738-6926757 | MS.gene33072:CDS | 50.0% | |
| CAGGAACCAAGATGGCAAGT+AGG | - | chr1.1:6928687-6928706 | MS.gene33072:intron | 50.0% | |
| CTTCGGACTGTAGGTGTCTT+TGG | + | chr1.1:6928075-6928094 | None:intergenic | 50.0% | |
| CTTTGAGCTACAGCATCTGC+TGG | + | chr1.1:6928726-6928745 | None:intergenic | 50.0% | |
| TTTGTCCCACGAAGGTAGCT+CGG | + | chr1.1:6927839-6927858 | None:intergenic | 50.0% | |
| ! | TGCATTGATGTCCTGCAGCT+AGG | - | chr1.1:6926706-6926725 | MS.gene33072:CDS | 50.0% |
| !! | CTTGGTTTGGTGGAAGTAGG+TGG | + | chr1.1:6924913-6924932 | None:intergenic | 50.0% |
| !! | GAGTGGTTCTGATGCTGTAC+TGG | + | chr1.1:6926569-6926588 | None:intergenic | 50.0% |
| !! | GCTCTTGGTTTGGTGGAAGT+AGG | + | chr1.1:6924916-6924935 | None:intergenic | 50.0% |
| !! | GTAGCTCGGTTGGTGAGATA+AGG | + | chr1.1:6927825-6927844 | None:intergenic | 50.0% |
| AAGCCTCGTGTGGAGTCCTT+TGG | - | chr1.1:6928518-6928537 | MS.gene33072:CDS | 55.0% | |
| AATAGGAGGAGAGGCCGAGA+AGG | + | chr1.1:6927354-6927373 | None:intergenic | 55.0% | |
| ACCAACCGAGCTACCTTCGT+GGG | - | chr1.1:6927831-6927850 | MS.gene33072:intron | 55.0% | |
| ACTTTATGCGGCGACTGGCA+AGG | + | chr1.1:6926072-6926091 | None:intergenic | 55.0% | |
| CAACAGACCAGCAACAGAGG+CGG | - | chr1.1:6925898-6925917 | MS.gene33072:CDS | 55.0% | |
| CACCGACATGTGTCGAACAC+CGG | + | chr1.1:6925358-6925377 | None:intergenic | 55.0% | |
| CCACATCACACCATGCATCC+AGG | - | chr1.1:6928574-6928593 | MS.gene33072:CDS | 55.0% | |
| CCTGGATGCATGGTGTGATG+TGG | + | chr1.1:6928577-6928596 | None:intergenic | 55.0% | |
| CTCGTGTGGAGTCCTTTGGT+GGG | - | chr1.1:6928522-6928541 | MS.gene33072:CDS | 55.0% | |
| GCGCAATCTCAGGTGATACC+TGG | + | chr1.1:6926799-6926818 | None:intergenic | 55.0% | |
| GGCGGTTCCTTACTTTGAGC+AGG | - | chr1.1:6925916-6925935 | MS.gene33072:CDS | 55.0% | |
| TAAGGAACCGCCTCTGTTGC+TGG | + | chr1.1:6925908-6925927 | None:intergenic | 55.0% | |
| TTGTCACCTGCTCAGCTTGG+AGG | - | chr1.1:6925266-6925285 | MS.gene33072:intron | 55.0% | |
| !! | GGTTTGGTGGAAGTAGGTGG+TGG | + | chr1.1:6924910-6924929 | None:intergenic | 55.0% |
| !!! | AGTTTTAAGCCGGAGGTCCC+GGG | + | chr1.1:6927791-6927810 | None:intergenic | 55.0% |
| !!! | GAGTTTTAAGCCGGAGGTCC+CGG | + | chr1.1:6927792-6927811 | None:intergenic | 55.0% |
| CACCAACCGAGCTACCTTCG+TGG | - | chr1.1:6927830-6927849 | MS.gene33072:intron | 60.0% | |
| CCACCAAAGGACTCCACACG+AGG | + | chr1.1:6928524-6928543 | None:intergenic | 60.0% | |
| CCTCGTGTGGAGTCCTTTGG+TGG | - | chr1.1:6928521-6928540 | MS.gene33072:CDS | 60.0% | |
| GAGATCAAACCCGGGACCTC+CGG | - | chr1.1:6927779-6927798 | MS.gene33072:intron | 60.0% | |
| GGAAGACCTCCAAGCTGAGC+AGG | + | chr1.1:6925275-6925294 | None:intergenic | 60.0% | |
| GGCATCATCTGGCTGACAGC+AGG | + | chr1.1:6926733-6926752 | None:intergenic | 60.0% | |
| TCCCACGAAGGTAGCTCGGT+TGG | + | chr1.1:6927835-6927854 | None:intergenic | 60.0% | |
| TGACAGCAGGACCTAGCTGC+AGG | + | chr1.1:6926720-6926739 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 6924673 | 6928824 | 6924673 | ID=MS.gene33072 |
| chr1.1 | mRNA | 6924673 | 6928824 | 6924673 | ID=MS.gene33072.t1;Parent=MS.gene33072 |
| chr1.1 | exon | 6928772 | 6928824 | 6928772 | ID=MS.gene33072.t1.exon1;Parent=MS.gene33072.t1 |
| chr1.1 | CDS | 6928772 | 6928824 | 6928772 | ID=cds.MS.gene33072.t1;Parent=MS.gene33072.t1 |
| chr1.1 | exon | 6928505 | 6928687 | 6928505 | ID=MS.gene33072.t1.exon2;Parent=MS.gene33072.t1 |
| chr1.1 | CDS | 6928505 | 6928687 | 6928505 | ID=cds.MS.gene33072.t1;Parent=MS.gene33072.t1 |
| chr1.1 | exon | 6928182 | 6928385 | 6928182 | ID=MS.gene33072.t1.exon3;Parent=MS.gene33072.t1 |
| chr1.1 | CDS | 6928182 | 6928385 | 6928182 | ID=cds.MS.gene33072.t1;Parent=MS.gene33072.t1 |
| chr1.1 | exon | 6927875 | 6927932 | 6927875 | ID=MS.gene33072.t1.exon4;Parent=MS.gene33072.t1 |
| chr1.1 | CDS | 6927875 | 6927932 | 6927875 | ID=cds.MS.gene33072.t1;Parent=MS.gene33072.t1 |
| chr1.1 | exon | 6927560 | 6927622 | 6927560 | ID=MS.gene33072.t1.exon5;Parent=MS.gene33072.t1 |
| chr1.1 | CDS | 6927560 | 6927622 | 6927560 | ID=cds.MS.gene33072.t1;Parent=MS.gene33072.t1 |
| chr1.1 | exon | 6926698 | 6926773 | 6926698 | ID=MS.gene33072.t1.exon6;Parent=MS.gene33072.t1 |
| chr1.1 | CDS | 6926698 | 6926773 | 6926698 | ID=cds.MS.gene33072.t1;Parent=MS.gene33072.t1 |
| chr1.1 | exon | 6925852 | 6925967 | 6925852 | ID=MS.gene33072.t1.exon7;Parent=MS.gene33072.t1 |
| chr1.1 | CDS | 6925852 | 6925967 | 6925852 | ID=cds.MS.gene33072.t1;Parent=MS.gene33072.t1 |
| chr1.1 | exon | 6925129 | 6925218 | 6925129 | ID=MS.gene33072.t1.exon8;Parent=MS.gene33072.t1 |
| chr1.1 | CDS | 6925129 | 6925218 | 6925129 | ID=cds.MS.gene33072.t1;Parent=MS.gene33072.t1 |
| chr1.1 | exon | 6924902 | 6925033 | 6924902 | ID=MS.gene33072.t1.exon9;Parent=MS.gene33072.t1 |
| chr1.1 | CDS | 6924902 | 6925033 | 6924902 | ID=cds.MS.gene33072.t1;Parent=MS.gene33072.t1 |
| chr1.1 | exon | 6924673 | 6924807 | 6924673 | ID=MS.gene33072.t1.exon10;Parent=MS.gene33072.t1 |
| chr1.1 | CDS | 6924673 | 6924807 | 6924673 | ID=cds.MS.gene33072.t1;Parent=MS.gene33072.t1 |
| Gene Sequence |
| Protein sequence |
