Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33017.t1 | XP_013465889.1 | 97.6 | 452 | 7 | 1 | 1 | 448 | 1 | 452 | 6.20E-256 | 892.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33017.t1 | Q8H1F5 | 58.2 | 318 | 86 | 8 | 11 | 288 | 21 | 331 | 7.7e-90 | 332.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33017.t1 | A0A072VP83 | 97.6 | 452 | 7 | 1 | 1 | 448 | 1 | 452 | 4.5e-256 | 892.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene33017.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene33017 | 0.81488 | 1.23E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene33017 | 0.833569 | 4.95E-56 | -1.69E-46 |
| MS.gene049396 | MS.gene33017 | 0.826942 | 2.06E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene33017 | 0.843288 | 1.54E-58 | -1.69E-46 |
| MS.gene049633 | MS.gene33017 | 0.81529 | 9.97E-52 | -1.69E-46 |
| MS.gene049794 | MS.gene33017 | 0.815257 | 1.01E-51 | -1.69E-46 |
| MS.gene050122 | MS.gene33017 | 0.800087 | 1.70E-48 | -1.69E-46 |
| MS.gene050170 | MS.gene33017 | 0.840543 | 8.16E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene33017 | 0.824475 | 7.91E-54 | -1.69E-46 |
| MS.gene050499 | MS.gene33017 | 0.812824 | 3.49E-51 | -1.69E-46 |
| MS.gene050502 | MS.gene33017 | 0.817984 | 2.48E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene33017 | 0.811583 | 6.51E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene33017 | 0.837131 | 6.23E-57 | -1.69E-46 |
| MS.gene050553 | MS.gene33017 | 0.830637 | 2.62E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene33017 | 0.805105 | 1.57E-49 | -1.69E-46 |
| MS.gene050647 | MS.gene33017 | -0.802026 | 6.82E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene33017 | 0.805143 | 1.54E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene33017 | 0.865559 | 5.41E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene33017 | 0.813355 | 2.67E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene33017 | 0.85184 | 6.83E-61 | -1.69E-46 |
| MS.gene05081 | MS.gene33017 | 0.848 | 8.10E-60 | -1.69E-46 |
| MS.gene050868 | MS.gene33017 | 0.867942 | 9.43E-66 | -1.69E-46 |
| MS.gene050871 | MS.gene33017 | 0.871708 | 5.56E-67 | -1.69E-46 |
| MS.gene050950 | MS.gene33017 | 0.860398 | 2.12E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene33017 | 0.804774 | 1.84E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene33017 | 0.824117 | 9.60E-54 | -1.69E-46 |
| MS.gene051588 | MS.gene33017 | 0.813303 | 2.74E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene33017 | 0.803053 | 4.19E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene33017 | 0.843993 | 9.95E-59 | -1.69E-46 |
| MS.gene051838 | MS.gene33017 | 0.884471 | 1.86E-71 | -1.69E-46 |
| MS.gene051858 | MS.gene33017 | 0.80305 | 4.20E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene33017 | 0.822796 | 1.96E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene33017 | 0.820997 | 5.10E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene33017 | 0.870328 | 1.59E-66 | -1.69E-46 |
| MS.gene052346 | MS.gene33017 | 0.84554 | 3.81E-59 | -1.69E-46 |
| MS.gene05240 | MS.gene33017 | -0.805361 | 1.39E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene33017 | 0.865427 | 5.95E-65 | -1.69E-46 |
| MS.gene052482 | MS.gene33017 | 0.805577 | 1.25E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene33017 | 0.812917 | 3.33E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene33017 | 0.836271 | 1.03E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene33017 | 0.850492 | 1.64E-60 | -1.69E-46 |
| MS.gene052505 | MS.gene33017 | 0.829919 | 3.93E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene33017 | 0.816762 | 4.68E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene33017 | 0.849151 | 3.89E-60 | -1.69E-46 |
| MS.gene052825 | MS.gene33017 | 0.851895 | 6.59E-61 | -1.69E-46 |
| MS.gene052966 | MS.gene33017 | 0.830491 | 2.85E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene33017 | 0.851394 | 9.13E-61 | -1.69E-46 |
| MS.gene053203 | MS.gene33017 | 0.840752 | 7.20E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene33017 | 0.817261 | 3.61E-52 | -1.69E-46 |
| MS.gene053318 | MS.gene33017 | 0.85153 | 8.36E-61 | -1.69E-46 |
| MS.gene053436 | MS.gene33017 | 0.826794 | 2.23E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene33017 | 0.823813 | 1.13E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene33017 | 0.834747 | 2.51E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene33017 | 0.858909 | 5.96E-63 | -1.69E-46 |
| MS.gene053626 | MS.gene33017 | 0.861344 | 1.10E-63 | -1.69E-46 |
| MS.gene053632 | MS.gene33017 | 0.801232 | 9.92E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene33017 | 0.863703 | 2.06E-64 | -1.69E-46 |
| MS.gene054003 | MS.gene33017 | 0.837483 | 5.06E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene33017 | 0.845686 | 3.48E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene33017 | 0.825095 | 5.65E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene33017 | 0.805692 | 1.18E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene33017 | -0.811733 | 6.04E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene33017 | 0.831375 | 1.73E-55 | -1.69E-46 |
| MS.gene054742 | MS.gene33017 | -0.8045 | 2.10E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene33017 | 0.85873 | 6.74E-63 | -1.69E-46 |
| MS.gene05494 | MS.gene33017 | 0.852573 | 4.22E-61 | -1.69E-46 |
| MS.gene05505 | MS.gene33017 | 0.80616 | 9.41E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene33017 | 0.824324 | 8.59E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene33017 | 0.82001 | 8.60E-53 | -1.69E-46 |
| MS.gene055486 | MS.gene33017 | 0.806 | 1.02E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene33017 | 0.816935 | 4.28E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene33017 | 0.855123 | 7.79E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene33017 | 0.809113 | 2.22E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene33017 | 0.864484 | 1.18E-64 | -1.69E-46 |
| MS.gene055744 | MS.gene33017 | 0.860533 | 1.93E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene33017 | 0.806529 | 7.87E-50 | -1.69E-46 |
| MS.gene055892 | MS.gene33017 | 0.802506 | 5.43E-49 | -1.69E-46 |
| MS.gene055893 | MS.gene33017 | 0.828082 | 1.10E-54 | -1.69E-46 |
| MS.gene055894 | MS.gene33017 | 0.811843 | 5.72E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene33017 | 0.854331 | 1.32E-61 | -1.69E-46 |
| MS.gene055909 | MS.gene33017 | 0.822333 | 2.51E-53 | -1.69E-46 |
| MS.gene055911 | MS.gene33017 | 0.822292 | 2.56E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene33017 | 0.815299 | 9.93E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene33017 | 0.835938 | 1.25E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene33017 | 0.884859 | 1.34E-71 | -1.69E-46 |
| MS.gene056313 | MS.gene33017 | -0.802377 | 5.77E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene33017 | 0.835284 | 1.84E-56 | -1.69E-46 |
| MS.gene056422 | MS.gene33017 | 0.802305 | 5.98E-49 | -1.69E-46 |
| MS.gene056446 | MS.gene33017 | 0.808188 | 3.50E-50 | -1.69E-46 |
| MS.gene056448 | MS.gene33017 | 0.817705 | 2.87E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene33017 | 0.826215 | 3.07E-54 | -1.69E-46 |
| MS.gene05666 | MS.gene33017 | 0.806611 | 7.56E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene33017 | 0.803927 | 2.76E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene33017 | 0.820232 | 7.65E-53 | -1.69E-46 |
| MS.gene057048 | MS.gene33017 | 0.840775 | 7.10E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene33017 | 0.817545 | 3.12E-52 | -1.69E-46 |
| MS.gene057086 | MS.gene33017 | 0.832657 | 8.34E-56 | -1.69E-46 |
| MS.gene057289 | MS.gene33017 | 0.85748 | 1.59E-62 | -1.69E-46 |
| MS.gene057658 | MS.gene33017 | 0.833372 | 5.54E-56 | -1.69E-46 |
| MS.gene057734 | MS.gene33017 | 0.823216 | 1.56E-53 | -1.69E-46 |
| MS.gene057856 | MS.gene33017 | 0.81831 | 2.10E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene33017 | 0.848489 | 5.93E-60 | -1.69E-46 |
| MS.gene058120 | MS.gene33017 | 0.843572 | 1.29E-58 | -1.69E-46 |
| MS.gene058130 | MS.gene33017 | 0.862534 | 4.74E-64 | -1.69E-46 |
| MS.gene058157 | MS.gene33017 | 0.876986 | 9.02E-69 | -1.69E-46 |
| MS.gene058338 | MS.gene33017 | 0.834217 | 3.41E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene33017 | 0.844584 | 6.90E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene33017 | 0.871924 | 4.72E-67 | -1.69E-46 |
| MS.gene058420 | MS.gene33017 | 0.801119 | 1.05E-48 | -1.69E-46 |
| MS.gene058444 | MS.gene33017 | 0.834683 | 2.60E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene33017 | 0.806797 | 6.91E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene33017 | 0.817926 | 2.56E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene33017 | 0.835149 | 1.99E-56 | -1.69E-46 |
| MS.gene058948 | MS.gene33017 | 0.836976 | 6.82E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene33017 | 0.848559 | 5.68E-60 | -1.69E-46 |
| MS.gene05913 | MS.gene33017 | 0.802845 | 4.62E-49 | -1.69E-46 |
| MS.gene059303 | MS.gene33017 | 0.8203 | 7.38E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene33017 | 0.80288 | 4.55E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene33017 | 0.837805 | 4.18E-57 | -1.69E-46 |
| MS.gene059368 | MS.gene33017 | 0.828335 | 9.52E-55 | -1.69E-46 |
| MS.gene059517 | MS.gene33017 | 0.81929 | 1.26E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene33017 | 0.87337 | 1.55E-67 | -1.69E-46 |
| MS.gene059718 | MS.gene33017 | 0.827276 | 1.71E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene33017 | 0.815413 | 9.36E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene33017 | 0.807985 | 3.87E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene33017 | 0.805654 | 1.20E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene33017 | 0.837038 | 6.58E-57 | -1.69E-46 |
| MS.gene060372 | MS.gene33017 | 0.831917 | 1.27E-55 | -1.69E-46 |
| MS.gene060482 | MS.gene33017 | 0.824462 | 7.97E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene33017 | 0.825912 | 3.62E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene33017 | 0.842079 | 3.22E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene33017 | 0.830552 | 2.75E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene33017 | 0.831442 | 1.67E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene33017 | 0.845022 | 5.26E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene33017 | 0.827412 | 1.59E-54 | -1.69E-46 |
| MS.gene06097 | MS.gene33017 | 0.81617 | 6.35E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene33017 | 0.822087 | 2.86E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33017.t1 | MTR_1g016010 | 97.566 | 452 | 7 | 1 | 1 | 448 | 1 | 452 | 0.0 | 922 |
| MS.gene33017.t1 | MTR_2g099990 | 48.984 | 492 | 170 | 17 | 11 | 448 | 1 | 465 | 1.98e-133 | 392 |
| MS.gene33017.t1 | MTR_8g017210 | 47.129 | 505 | 187 | 14 | 1 | 433 | 1 | 497 | 4.36e-130 | 386 |
| MS.gene33017.t1 | MTR_2g099990 | 49.409 | 423 | 148 | 16 | 65 | 448 | 1 | 396 | 1.87e-113 | 339 |
| MS.gene33017.t1 | MTR_4g059870 | 73.711 | 194 | 50 | 1 | 16 | 208 | 12 | 205 | 4.01e-105 | 321 |
| MS.gene33017.t1 | MTR_2g093960 | 45.038 | 393 | 161 | 10 | 40 | 420 | 31 | 380 | 1.65e-102 | 311 |
| MS.gene33017.t1 | MTR_1g094115 | 76.216 | 185 | 41 | 3 | 38 | 222 | 45 | 226 | 7.08e-102 | 314 |
| MS.gene33017.t1 | MTR_1g112270 | 81.013 | 158 | 29 | 1 | 44 | 201 | 47 | 203 | 1.31e-97 | 304 |
| MS.gene33017.t1 | MTR_1g112270 | 75.740 | 169 | 29 | 2 | 44 | 201 | 47 | 214 | 7.44e-94 | 295 |
| MS.gene33017.t1 | MTR_2g090745 | 79.618 | 157 | 31 | 1 | 51 | 207 | 17 | 172 | 9.22e-92 | 285 |
| MS.gene33017.t1 | MTR_1g094115 | 69.189 | 185 | 37 | 4 | 38 | 222 | 45 | 209 | 1.46e-86 | 274 |
| MS.gene33017.t1 | MTR_2g017720 | 72.727 | 121 | 27 | 2 | 46 | 166 | 318 | 432 | 1.94e-52 | 182 |
| MS.gene33017.t1 | MTR_3g102000 | 48.193 | 166 | 68 | 5 | 68 | 229 | 36 | 187 | 3.23e-36 | 133 |
| MS.gene33017.t1 | MTR_5g030560 | 72.000 | 50 | 14 | 0 | 46 | 95 | 11 | 60 | 2.39e-21 | 88.2 |
| MS.gene33017.t1 | MTR_1g093095 | 34.161 | 161 | 91 | 6 | 47 | 194 | 91 | 249 | 1.91e-19 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33017.t1 | AT1G55110 | 59.752 | 323 | 93 | 7 | 7 | 294 | 17 | 337 | 2.10e-120 | 359 |
| MS.gene33017.t1 | AT1G55110 | 59.752 | 323 | 93 | 7 | 7 | 294 | 17 | 337 | 2.10e-120 | 359 |
| MS.gene33017.t1 | AT1G55110 | 59.752 | 323 | 93 | 7 | 7 | 294 | 17 | 337 | 2.10e-120 | 359 |
| MS.gene33017.t1 | AT5G66730 | 75.000 | 196 | 41 | 3 | 10 | 203 | 4 | 193 | 5.88e-106 | 323 |
| MS.gene33017.t1 | AT3G50700 | 72.864 | 199 | 50 | 2 | 5 | 203 | 1 | 195 | 2.29e-105 | 320 |
| MS.gene33017.t1 | AT3G13810 | 69.444 | 216 | 46 | 2 | 8 | 203 | 17 | 232 | 2.02e-104 | 320 |
| MS.gene33017.t1 | AT3G13810 | 69.444 | 216 | 46 | 2 | 8 | 203 | 17 | 232 | 2.02e-104 | 320 |
| MS.gene33017.t1 | AT3G13810 | 69.444 | 216 | 46 | 2 | 8 | 203 | 12 | 227 | 2.36e-104 | 320 |
| MS.gene33017.t1 | AT3G45260 | 79.532 | 171 | 35 | 0 | 40 | 210 | 38 | 208 | 2.28e-103 | 315 |
| MS.gene33017.t1 | AT3G45260 | 79.532 | 171 | 35 | 0 | 40 | 210 | 38 | 208 | 2.28e-103 | 315 |
| MS.gene33017.t1 | AT1G03840 | 77.841 | 176 | 38 | 1 | 38 | 213 | 38 | 212 | 1.50e-102 | 315 |
| MS.gene33017.t1 | AT5G03150 | 76.966 | 178 | 38 | 1 | 40 | 214 | 52 | 229 | 1.64e-102 | 315 |
| MS.gene33017.t1 | AT4G02670 | 47.230 | 379 | 146 | 10 | 41 | 399 | 53 | 397 | 3.04e-102 | 310 |
| MS.gene33017.t1 | AT4G02670 | 47.230 | 379 | 146 | 10 | 41 | 399 | 55 | 399 | 3.20e-102 | 310 |
| MS.gene33017.t1 | AT3G13810 | 69.014 | 213 | 46 | 2 | 11 | 203 | 1 | 213 | 4.85e-102 | 313 |
| MS.gene33017.t1 | AT2G02080 | 42.558 | 430 | 140 | 11 | 38 | 371 | 51 | 469 | 8.39e-102 | 313 |
| MS.gene33017.t1 | AT2G02080 | 42.558 | 430 | 140 | 11 | 38 | 371 | 51 | 469 | 8.39e-102 | 313 |
| MS.gene33017.t1 | AT2G02080 | 42.558 | 430 | 140 | 11 | 38 | 371 | 51 | 469 | 8.39e-102 | 313 |
| MS.gene33017.t1 | AT2G02080 | 42.558 | 430 | 140 | 11 | 38 | 371 | 51 | 469 | 8.39e-102 | 313 |
| MS.gene33017.t1 | AT5G44160 | 75.000 | 188 | 46 | 1 | 24 | 211 | 20 | 206 | 2.03e-101 | 311 |
| MS.gene33017.t1 | AT1G14580 | 74.566 | 173 | 43 | 1 | 31 | 203 | 43 | 214 | 5.28e-101 | 310 |
| MS.gene33017.t1 | AT1G14580 | 74.566 | 173 | 43 | 1 | 31 | 203 | 43 | 214 | 5.28e-101 | 310 |
| MS.gene33017.t1 | AT1G14580 | 74.566 | 173 | 43 | 1 | 31 | 203 | 57 | 228 | 1.23e-100 | 309 |
| MS.gene33017.t1 | AT1G03840 | 76.705 | 176 | 38 | 2 | 38 | 213 | 38 | 210 | 6.63e-99 | 305 |
| MS.gene33017.t1 | AT2G02070 | 80.368 | 163 | 31 | 1 | 41 | 203 | 52 | 213 | 1.33e-98 | 308 |
| MS.gene33017.t1 | AT2G02070 | 80.368 | 163 | 31 | 1 | 41 | 203 | 52 | 213 | 1.33e-98 | 308 |
| MS.gene33017.t1 | AT5G60470 | 74.405 | 168 | 43 | 0 | 41 | 208 | 44 | 211 | 1.20e-96 | 298 |
| MS.gene33017.t1 | AT5G60470 | 74.405 | 168 | 43 | 0 | 41 | 208 | 40 | 207 | 1.23e-96 | 298 |
| MS.gene33017.t1 | AT3G13810 | 64.414 | 222 | 53 | 2 | 8 | 203 | 12 | 233 | 7.62e-95 | 295 |
| MS.gene33017.t1 | AT5G44160 | 79.141 | 163 | 33 | 1 | 49 | 211 | 6 | 167 | 2.77e-94 | 291 |
| MS.gene33017.t1 | AT3G13810 | 83.553 | 152 | 25 | 0 | 52 | 203 | 68 | 219 | 3.10e-94 | 293 |
| MS.gene33017.t1 | AT5G60470 | 73.885 | 157 | 41 | 0 | 52 | 208 | 46 | 202 | 5.92e-89 | 278 |
| MS.gene33017.t1 | AT2G02080 | 41.439 | 403 | 129 | 11 | 65 | 371 | 1 | 392 | 3.86e-88 | 276 |
| MS.gene33017.t1 | AT2G02080 | 41.439 | 403 | 129 | 11 | 65 | 371 | 1 | 392 | 3.86e-88 | 276 |
| MS.gene33017.t1 | AT1G68130 | 63.529 | 170 | 56 | 2 | 29 | 197 | 34 | 198 | 6.63e-75 | 241 |
| MS.gene33017.t1 | AT2G01940 | 62.722 | 169 | 61 | 2 | 28 | 195 | 32 | 199 | 2.79e-73 | 237 |
| MS.gene33017.t1 | AT1G25250 | 57.895 | 190 | 71 | 4 | 10 | 197 | 9 | 191 | 4.14e-72 | 232 |
| MS.gene33017.t1 | AT2G01940 | 61.765 | 170 | 62 | 3 | 28 | 195 | 32 | 200 | 1.06e-69 | 228 |
| MS.gene33017.t1 | AT1G25250 | 63.758 | 149 | 52 | 2 | 51 | 197 | 20 | 168 | 4.09e-68 | 221 |
| MS.gene33017.t1 | AT1G68130 | 64.286 | 112 | 39 | 1 | 87 | 197 | 1 | 112 | 1.42e-47 | 167 |
| MS.gene33017.t1 | AT1G25250 | 61.947 | 113 | 41 | 2 | 87 | 197 | 1 | 113 | 3.74e-45 | 159 |
| MS.gene33017.t1 | AT2G01940 | 62.727 | 110 | 40 | 1 | 87 | 195 | 1 | 110 | 1.28e-44 | 159 |
| MS.gene33017.t1 | AT1G34370 | 34.810 | 158 | 90 | 4 | 50 | 194 | 14 | 171 | 1.03e-22 | 98.2 |
| MS.gene33017.t1 | AT1G34370 | 34.810 | 158 | 90 | 4 | 50 | 194 | 224 | 381 | 3.55e-22 | 99.4 |
| MS.gene33017.t1 | AT1G34370 | 34.810 | 158 | 90 | 4 | 50 | 194 | 224 | 381 | 3.55e-22 | 99.4 |
| MS.gene33017.t1 | AT5G22890 | 31.395 | 172 | 103 | 4 | 36 | 194 | 185 | 354 | 4.33e-22 | 97.8 |
| MS.gene33017.t1 | AT1G13290 | 34.395 | 157 | 92 | 5 | 62 | 208 | 93 | 248 | 8.02e-20 | 90.1 |
| MS.gene33017.t1 | AT3G57670 | 32.749 | 171 | 96 | 6 | 62 | 215 | 209 | 377 | 3.60e-19 | 89.4 |
| MS.gene33017.t1 | AT3G20880 | 31.902 | 163 | 93 | 6 | 62 | 208 | 248 | 408 | 8.67e-19 | 88.6 |
| MS.gene33017.t1 | AT1G51220 | 33.803 | 142 | 83 | 5 | 62 | 194 | 170 | 309 | 1.09e-18 | 87.4 |
| MS.gene33017.t1 | AT1G34790 | 32.571 | 175 | 105 | 5 | 28 | 194 | 107 | 276 | 2.21e-17 | 82.8 |
| MS.gene33017.t1 | AT1G08290 | 34.507 | 142 | 83 | 4 | 62 | 194 | 172 | 312 | 2.21e-17 | 83.6 |
Find 83 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTAGTGCCACAAATTT+TGG | 0.055414 | 1.1:+6081549 | None:intergenic |
| TCTCATTGTTTGGCTTCTTA+TGG | 0.135453 | 1.1:-6080379 | MS.gene33017:CDS |
| GAGGAACAATATTCCCATTT+TGG | 0.167286 | 1.1:-6080196 | MS.gene33017:CDS |
| AACCATGGCTTTGATGAAAT+TGG | 0.176098 | 1.1:+6080716 | None:intergenic |
| CTCATTGTTTGGCTTCTTAT+GGG | 0.236544 | 1.1:-6080378 | MS.gene33017:CDS |
| AGTAACCATGATGGAATTTC+TGG | 0.247409 | 1.1:+6080649 | None:intergenic |
| TTTGAGTTGAAAGAATTATT+AGG | 0.263924 | 1.1:+6080577 | None:intergenic |
| AGGAAGATTTCTCTTCCTTT+TGG | 0.267985 | 1.1:+6082477 | None:intergenic |
| AGAGACTTGTTCAATATATC+TGG | 0.300064 | 1.1:-6080091 | MS.gene33017:CDS |
| GGAAACAAAGTTGTAGGGTT+AGG | 0.304016 | 1.1:+6080598 | None:intergenic |
| TGTTTGTTGCTAAGAGAGTT+TGG | 0.304831 | 1.1:+6081863 | None:intergenic |
| ATGCAAACTCACGTGCCTTC+AGG | 0.323277 | 1.1:-6080445 | MS.gene33017:CDS |
| GTTTGTTGCTAAGAGAGTTT+GGG | 0.340724 | 1.1:+6081864 | None:intergenic |
| TTCAATATATCTGGAATTGA+TGG | 0.346876 | 1.1:-6080082 | MS.gene33017:CDS |
| ACCATGGCTTTGATGAAATT+GGG | 0.358760 | 1.1:+6080717 | None:intergenic |
| ATGGCTTCACGTGAAGAAAT+AGG | 0.371641 | 1.1:-6080415 | MS.gene33017:CDS |
| TTATTAGGAAACAAAGTTGT+AGG | 0.372201 | 1.1:+6080592 | None:intergenic |
| AGGGCACTTGGTGACCTAAC+TGG | 0.384172 | 1.1:-6081670 | MS.gene33017:CDS |
| GAAACAAAGTTGTAGGGTTA+GGG | 0.390096 | 1.1:+6080599 | None:intergenic |
| AAAGCTAGCACTTGTGCCTC+AGG | 0.393473 | 1.1:+6081892 | None:intergenic |
| AGTGCTTCTTGATTCCAGTT+AGG | 0.403331 | 1.1:+6081656 | None:intergenic |
| GATAATGGTTCAAATGGGTT+GGG | 0.421089 | 1.1:+6080626 | None:intergenic |
| TGGGAGTGAGAAGAGAATAG+AGG | 0.421836 | 1.1:+6080736 | None:intergenic |
| TGATAATGGTTCAAATGGGT+TGG | 0.442086 | 1.1:+6080625 | None:intergenic |
| GGGAGTGAGAAGAGAATAGA+GGG | 0.447356 | 1.1:+6080737 | None:intergenic |
| GCACGTGAGTTTGCATTAAG+TGG | 0.454018 | 1.1:+6080452 | None:intergenic |
| TCTTGTCATCTCATCATCAT+TGG | 0.457129 | 1.1:+6080144 | None:intergenic |
| GCTTCTTCAGCAACCAAGAA+TGG | 0.463212 | 1.1:-6082529 | MS.gene33017:CDS |
| GTGTTCACCATGACCCTTCA+AGG | 0.470912 | 1.1:-6081690 | MS.gene33017:CDS |
| GAGAGATAATAATAACTTTG+AGG | 0.471825 | 1.1:-6080215 | MS.gene33017:CDS |
| CGTGAAGAAATAGGAACTAC+TGG | 0.478841 | 1.1:-6080406 | MS.gene33017:CDS |
| AAAAGGAAGAGAAATCTTCC+TGG | 0.478919 | 1.1:-6082475 | MS.gene33017:CDS |
| TGCATTAAGTGGGGTCTACA+AGG | 0.485099 | 1.1:+6080463 | None:intergenic |
| TATTAGGAAACAAAGTTGTA+GGG | 0.486072 | 1.1:+6080593 | None:intergenic |
| AAAGCTCATTCCAAAATTTG+TGG | 0.492046 | 1.1:-6081559 | MS.gene33017:CDS |
| AAAAGCAACATTATAAAGAA+TGG | 0.495322 | 1.1:-6080172 | MS.gene33017:CDS |
| AAACTCTCTTAGCAACAAAC+AGG | 0.496554 | 1.1:-6081861 | MS.gene33017:CDS |
| GTAAGCAAAATCAAACTCCT+TGG | 0.497139 | 1.1:-6080042 | MS.gene33017:CDS |
| AGATTCTTACCTTGAGAAGA+GGG | 0.498855 | 1.1:+6081507 | None:intergenic |
| GGAAGCACGGTGAGAAGAAG+TGG | 0.500086 | 1.1:-6081627 | MS.gene33017:CDS |
| CACGTGAGTTTGCATTAAGT+GGG | 0.505578 | 1.1:+6080453 | None:intergenic |
| ATCTAGAACCACAAGCCAAA+AGG | 0.506626 | 1.1:-6082492 | MS.gene33017:CDS |
| AACTCACGTGCCTTCAGGAA+TGG | 0.523050 | 1.1:-6080440 | MS.gene33017:CDS |
| AGAGATGATGAAAGGTTTGT+CGG | 0.525812 | 1.1:-6082599 | None:intergenic |
| TGGTGAACACATGTTGGCTC+TGG | 0.526908 | 1.1:+6081703 | None:intergenic |
| CATGACCCTTCAAGGGCACT+TGG | 0.527782 | 1.1:-6081682 | MS.gene33017:CDS |
| TCCCAATTTCATCAAAGCCA+TGG | 0.529104 | 1.1:-6080718 | MS.gene33017:CDS |
| GTTATGCAGTTCAGTCGGAT+TGG | 0.535164 | 1.1:-6081582 | MS.gene33017:CDS |
| CGTGCCTTCAGGAATGGCTA+TGG | 0.546913 | 1.1:-6080434 | MS.gene33017:CDS |
| TGCTTACCATGCAAACTCAA+AGG | 0.555451 | 1.1:+6080058 | None:intergenic |
| AGGTCACCAAGTGCCCTTGA+AGG | 0.557241 | 1.1:+6081676 | None:intergenic |
| TGAGTGATAGAGATGATGAA+AGG | 0.561148 | 1.1:-6082607 | None:intergenic |
| TAAGACCAGAAATTCCATCA+TGG | 0.562745 | 1.1:-6080654 | MS.gene33017:CDS |
| TAAACGTTATGCAGTTCAGT+CGG | 0.567043 | 1.1:-6081587 | MS.gene33017:CDS |
| AAGATTCTTACCTTGAGAAG+AGG | 0.572213 | 1.1:+6081506 | None:intergenic |
| GATGGTCCTTTGAGTTTGCA+TGG | 0.572532 | 1.1:-6080064 | MS.gene33017:CDS |
| CAAGTGCCCTTGAAGGGTCA+TGG | 0.580343 | 1.1:+6081683 | None:intergenic |
| TTACTGCTGCTATGAGCATG+AGG | 0.586599 | 1.1:-6080255 | MS.gene33017:CDS |
| GTGATAGTGGTTGAAAACCA+TGG | 0.587939 | 1.1:+6080701 | None:intergenic |
| TTTGTTGCTAAGAGAGTTTG+GGG | 0.590009 | 1.1:+6081865 | None:intergenic |
| AGAGAGGACATAATTTGCCA+TGG | 0.596190 | 1.1:-6081780 | MS.gene33017:CDS |
| ATTTGTGAGATTTGTAACAA+AGG | 0.598660 | 1.1:-6081835 | MS.gene33017:CDS |
| GGTCACCAAGTGCCCTTGAA+GGG | 0.601914 | 1.1:+6081677 | None:intergenic |
| AAGCTAGCACTTGTGCCTCA+GGG | 0.605138 | 1.1:+6081893 | None:intergenic |
| CTGTGATAAAACATCACAGA+AGG | 0.605312 | 1.1:+6080786 | None:intergenic |
| TGATGTGATGTATGGTAGTG+AGG | 0.613764 | 1.1:-6080302 | MS.gene33017:CDS |
| AATCTTCAGCTTCATAAGAG+AGG | 0.614070 | 1.1:-6081796 | MS.gene33017:CDS |
| TGTTCACCATGACCCTTCAA+GGG | 0.614167 | 1.1:-6081689 | MS.gene33017:CDS |
| GATGTGATGTATGGTAGTGA+GGG | 0.620627 | 1.1:-6080301 | MS.gene33017:CDS |
| AGCAACATTATAAAGAATGG+TGG | 0.626398 | 1.1:-6080169 | MS.gene33017:CDS |
| CAAAATCAAACTCCTTGGTG+AGG | 0.632534 | 1.1:-6080037 | None:intergenic |
| AGAAATCTTCCTGGCCACCC+AGG | 0.633086 | 1.1:-6082466 | MS.gene33017:intron |
| TGGGTTGGGAGTAACCATGA+TGG | 0.633109 | 1.1:+6080640 | None:intergenic |
| ACTGTGGAACCCTCTTCTCA+AGG | 0.634375 | 1.1:-6081516 | MS.gene33017:intron |
| GAAGCCATAGCCATTCCTGA+AGG | 0.639906 | 1.1:+6080430 | None:intergenic |
| AAAGAGTATAAGTGTGACTG+TGG | 0.643514 | 1.1:-6081532 | MS.gene33017:CDS |
| TACTGCTGCTATGAGCATGA+GGG | 0.646189 | 1.1:-6080254 | MS.gene33017:CDS |
| AAAGCAGTGGCAGACATGTG+AGG | 0.650724 | 1.1:+6080535 | None:intergenic |
| GATGATGAAAGGTTTGTCGG+TGG | 0.652402 | 1.1:-6082596 | MS.gene33017:CDS |
| ACGTGAGTTTGCATTAAGTG+GGG | 0.666291 | 1.1:+6080454 | None:intergenic |
| CCTGAATATCAGCCTCACCA+AGG | 0.685282 | 1.1:+6080025 | None:intergenic |
| GGGTCATGGTGAACACATGT+TGG | 0.693614 | 1.1:+6081697 | None:intergenic |
| ACTGCTGCTATGAGCATGAG+GGG | 0.697079 | 1.1:-6080253 | MS.gene33017:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATCTTATTAATTTAAATT+TGG | - | chr1.1:6081144-6081163 | MS.gene33017:intron | 10.0% |
| !! | AAATACAAAGAAATTAATCA+AGG | - | chr1.1:6081493-6081512 | MS.gene33017:intron | 15.0% |
| !! | AATACAAAGAAATTAATCAA+GGG | - | chr1.1:6081494-6081513 | MS.gene33017:intron | 15.0% |
| !! | AGTAATTTAAATTTAAAGGA+AGG | + | chr1.1:6081744-6081763 | None:intergenic | 15.0% |
| !! | ATTTAAAAAAGATTACCTTA+TGG | + | chr1.1:6081331-6081350 | None:intergenic | 15.0% |
| !! | CAAGAAAATAATATTACAAT+TGG | + | chr1.1:6080207-6080226 | None:intergenic | 15.0% |
| !! | CAAGAGTAATTTAAATTTAA+AGG | + | chr1.1:6081748-6081767 | None:intergenic | 15.0% |
| !! | TATATACCAATTTATATTAC+TGG | + | chr1.1:6080246-6080265 | None:intergenic | 15.0% |
| !! | TTCCCTAAAAAAAAATTAAT+AGG | + | chr1.1:6080637-6080656 | None:intergenic | 15.0% |
| !! | TTGAAAAAATATATGCATTA+TGG | + | chr1.1:6081376-6081395 | None:intergenic | 15.0% |
| !!! | AGCCTATTAATTTTTTTTTA+GGG | - | chr1.1:6080632-6080651 | MS.gene33017:CDS | 15.0% |
| !!! | TAATAAAATTTTTCGCTTAT+TGG | + | chr1.1:6081688-6081707 | None:intergenic | 15.0% |
| !!! | TACTATTAGTTTAAATTATG+AGG | + | chr1.1:6081528-6081547 | None:intergenic | 15.0% |
| !!! | TAGCCTATTAATTTTTTTTT+AGG | - | chr1.1:6080631-6080650 | MS.gene33017:CDS | 15.0% |
| !! | AAAAGCAACATTATAAAGAA+TGG | - | chr1.1:6082462-6082481 | MS.gene33017:intron | 20.0% |
| !! | ATACAAAGAAATTAATCAAG+GGG | - | chr1.1:6081495-6081514 | MS.gene33017:intron | 20.0% |
| !! | TAATATATCTAGAGACTAAT+CGG | + | chr1.1:6081636-6081655 | None:intergenic | 20.0% |
| !! | TATAAATTGGTATATACTGA+AGG | - | chr1.1:6080250-6080269 | MS.gene33017:CDS | 20.0% |
| !!! | AATTTATTTTTGATTGCAGA+AGG | - | chr1.1:6081803-6081822 | MS.gene33017:CDS | 20.0% |
| !!! | ATTTATTTTTGATTGCAGAA+GGG | - | chr1.1:6081804-6081823 | MS.gene33017:CDS | 20.0% |
| !!! | GTTTTACAATTGAATATTTG+TGG | - | chr1.1:6080685-6080704 | MS.gene33017:CDS | 20.0% |
| !!! | TATTATTTTCTTGTTCATGA+AGG | - | chr1.1:6080214-6080233 | MS.gene33017:CDS | 20.0% |
| !!! | TTGTATTTTTTCCTTGTTTA+CGG | + | chr1.1:6081481-6081500 | None:intergenic | 20.0% |
| !!! | TTTGAGTTGAAAGAATTATT+AGG | + | chr1.1:6082060-6082079 | None:intergenic | 20.0% |
| !!! | TTTTAAATAATGTACTTTGC+AGG | - | chr1.1:6081343-6081362 | MS.gene33017:intron | 20.0% |
| !!! | TTTTTTTTGTTAATGCAATG+TGG | - | chr1.1:6081304-6081323 | MS.gene33017:intron | 20.0% |
| ! | AAAAAAAGACAGGGTTTAAT+TGG | - | chr1.1:6080362-6080381 | MS.gene33017:CDS | 25.0% |
| ! | ACTGAAGGAGTTATATATAT+AGG | - | chr1.1:6080265-6080284 | MS.gene33017:CDS | 25.0% |
| ! | AGTAAATGTTTAGTATGAGT+CGG | - | chr1.1:6081544-6081563 | MS.gene33017:CDS | 25.0% |
| ! | AGTAGTCCAGTAATATAAAT+TGG | - | chr1.1:6080237-6080256 | MS.gene33017:CDS | 25.0% |
| ! | ATTTGTGAGATTTGTAACAA+AGG | - | chr1.1:6080799-6080818 | MS.gene33017:CDS | 25.0% |
| ! | GAGAGATAATAATAACTTTG+AGG | - | chr1.1:6082419-6082438 | MS.gene33017:intron | 25.0% |
| ! | GATACAAACAAACTAAATCA+TGG | - | chr1.1:6081175-6081194 | MS.gene33017:intron | 25.0% |
| ! | GGCTGAAAATATTGTTAATT+TGG | - | chr1.1:6080706-6080725 | MS.gene33017:CDS | 25.0% |
| ! | TATTAGGAAACAAAGTTGTA+GGG | + | chr1.1:6082044-6082063 | None:intergenic | 25.0% |
| ! | TTACCTATCAAAAAAAGACA+GGG | - | chr1.1:6080353-6080372 | MS.gene33017:CDS | 25.0% |
| ! | TTATTAGGAAACAAAGTTGT+AGG | + | chr1.1:6082045-6082064 | None:intergenic | 25.0% |
| !! | TTATATATATAGGAGGTGTA+GGG | - | chr1.1:6080275-6080294 | MS.gene33017:CDS | 25.0% |
| !! | TTCAATATATCTGGAATTGA+TGG | - | chr1.1:6082552-6082571 | MS.gene33017:CDS | 25.0% |
| !!! | AATGTTGCTTTTACCAAAAT+GGG | + | chr1.1:6082454-6082473 | None:intergenic | 25.0% |
| !!! | GTTTTGATAATGGTTCAAAT+GGG | + | chr1.1:6082016-6082035 | None:intergenic | 25.0% |
| !!! | TAATGTTGCTTTTACCAAAA+TGG | + | chr1.1:6082455-6082474 | None:intergenic | 25.0% |
| !!! | TGTATTTTTTCCTTGTTTAC+GGG | + | chr1.1:6081480-6081499 | None:intergenic | 25.0% |
| !!! | TGTTAGTAGTTAGTTTGTTA+GGG | + | chr1.1:6080332-6080351 | None:intergenic | 25.0% |
| AAAGCTCATTCCAAAATTTG+TGG | - | chr1.1:6081075-6081094 | MS.gene33017:intron | 30.0% | |
| AACAAATATTGCATGCTCTT+TGG | + | chr1.1:6081599-6081618 | None:intergenic | 30.0% | |
| AGCAACATTATAAAGAATGG+TGG | - | chr1.1:6082465-6082484 | MS.gene33017:intron | 30.0% | |
| CAATATATCACCTAAATCCA+TGG | + | chr1.1:6080426-6080445 | None:intergenic | 30.0% | |
| CTTACCTATCAAAAAAAGAC+AGG | - | chr1.1:6080352-6080371 | MS.gene33017:CDS | 30.0% | |
| GAAGGAGTTATATATATAGG+AGG | - | chr1.1:6080268-6080287 | MS.gene33017:CDS | 30.0% | |
| TCAACCACTATCACTAAAAA+AGG | - | chr1.1:6081942-6081961 | MS.gene33017:intron | 30.0% | |
| TGGATTTAGGTGATATATTG+TGG | - | chr1.1:6080426-6080445 | MS.gene33017:CDS | 30.0% | |
| TTGTCATAACTCATATCTCT+TGG | + | chr1.1:6080403-6080422 | None:intergenic | 30.0% | |
| ! | AGAGACTTGTTCAATATATC+TGG | - | chr1.1:6082543-6082562 | MS.gene33017:CDS | 30.0% |
| ! | ATTGGTGTGATTTTATTACC+TGG | + | chr1.1:6080189-6080208 | None:intergenic | 30.0% |
| ! | GTTATATATATAGGAGGTGT+AGG | - | chr1.1:6080274-6080293 | MS.gene33017:CDS | 30.0% |
| ! | TTGGTGTGATTTTATTACCT+GGG | + | chr1.1:6080188-6080207 | None:intergenic | 30.0% |
| !! | GTGTTAGTAGTTAGTTTGTT+AGG | + | chr1.1:6080333-6080352 | None:intergenic | 30.0% |
| !! | TTTCTTTTCTTTAGCTTCCA+TGG | + | chr1.1:6080874-6080893 | None:intergenic | 30.0% |
| !!! | AAACCCTGTCTTTTTTTGAT+AGG | + | chr1.1:6080359-6080378 | None:intergenic | 30.0% |
| !!! | ACAAGAGATTTTTTGAGTCT+TGG | - | chr1.1:6082507-6082526 | MS.gene33017:CDS | 30.0% |
| !!! | GGTTTTGATAATGGTTCAAA+TGG | + | chr1.1:6082017-6082036 | None:intergenic | 30.0% |
| !!! | TACTGGTTTTTCTCATTGTT+TGG | - | chr1.1:6082245-6082264 | MS.gene33017:intron | 30.0% |
| !!! | TGTTCCTTTTTTAGTGATAG+TGG | + | chr1.1:6081949-6081968 | None:intergenic | 30.0% |
| AAAAGGAAGAGAAATCTTCC+TGG | - | chr1.1:6080159-6080178 | MS.gene33017:CDS | 35.0% | |
| AAACTCTCTTAGCAACAAAC+AGG | - | chr1.1:6080773-6080792 | MS.gene33017:CDS | 35.0% | |
| AAGATTCTTACCTTGAGAAG+AGG | + | chr1.1:6081131-6081150 | None:intergenic | 35.0% | |
| AATCTTCAGCTTCATAAGAG+AGG | - | chr1.1:6080838-6080857 | MS.gene33017:intron | 35.0% | |
| ACAAAGAAAAGTAGTAGCCA+AGG | + | chr1.1:6080575-6080594 | None:intergenic | 35.0% | |
| AGATTCTTACCTTGAGAAGA+GGG | + | chr1.1:6081130-6081149 | None:intergenic | 35.0% | |
| CAAAGAAAAGTAGTAGCCAA+GGG | + | chr1.1:6080574-6080593 | None:intergenic | 35.0% | |
| CTGTGATAAAACATCACAGA+AGG | + | chr1.1:6081851-6081870 | None:intergenic | 35.0% | |
| GAAACAAAGTTGTAGGGTTA+GGG | + | chr1.1:6082038-6082057 | None:intergenic | 35.0% | |
| GATATGAGTTATGACAACCA+TGG | - | chr1.1:6080406-6080425 | MS.gene33017:CDS | 35.0% | |
| GTAAGCAAAATCAAACTCCT+TGG | - | chr1.1:6082592-6082611 | MS.gene33017:CDS | 35.0% | |
| GTTATGACAACCATGGATTT+AGG | - | chr1.1:6080413-6080432 | MS.gene33017:CDS | 35.0% | |
| TAAACGTTATGCAGTTCAGT+CGG | - | chr1.1:6081047-6081066 | MS.gene33017:intron | 35.0% | |
| TAAGACCAGAAATTCCATCA+TGG | - | chr1.1:6081980-6081999 | MS.gene33017:intron | 35.0% | |
| TCTTGTCATCTCATCATCAT+TGG | + | chr1.1:6082493-6082512 | None:intergenic | 35.0% | |
| TTAATGCAATGTGGTCCATA+AGG | - | chr1.1:6081313-6081332 | MS.gene33017:intron | 35.0% | |
| TTCGCTTATTGGAGATGAAT+TGG | + | chr1.1:6081677-6081696 | None:intergenic | 35.0% | |
| TTTGTTGCTAAGAGAGTTTG+GGG | + | chr1.1:6080772-6080791 | None:intergenic | 35.0% | |
| ! | AAAGAGTATAAGTGTGACTG+TGG | - | chr1.1:6081102-6081121 | MS.gene33017:intron | 35.0% |
| ! | AGGAAGATTTCTCTTCCTTT+TGG | + | chr1.1:6080160-6080179 | None:intergenic | 35.0% |
| ! | AGTAACCATGATGGAATTTC+TGG | + | chr1.1:6081988-6082007 | None:intergenic | 35.0% |
| ! | CTCATTGTTTGGCTTCTTAT+GGG | - | chr1.1:6082256-6082275 | MS.gene33017:intron | 35.0% |
| ! | CTCTTTAGTGCCACAAATTT+TGG | + | chr1.1:6081088-6081107 | None:intergenic | 35.0% |
| ! | CTTCTGTGATGTTTTATCAC+AGG | - | chr1.1:6081849-6081868 | MS.gene33017:CDS | 35.0% |
| ! | CTTTTGCATGATGTGATGTA+TGG | - | chr1.1:6082324-6082343 | MS.gene33017:intron | 35.0% |
| ! | GAGGAACAATATTCCCATTT+TGG | - | chr1.1:6082438-6082457 | MS.gene33017:intron | 35.0% |
| ! | GATAATGGTTCAAATGGGTT+GGG | + | chr1.1:6082011-6082030 | None:intergenic | 35.0% |
| ! | GTCTCTCTCTTATCTCTTTT+TGG | + | chr1.1:6081229-6081248 | None:intergenic | 35.0% |
| ! | GTTTGTTGCTAAGAGAGTTT+GGG | + | chr1.1:6080773-6080792 | None:intergenic | 35.0% |
| ! | TCTCATTGTTTGGCTTCTTA+TGG | - | chr1.1:6082255-6082274 | MS.gene33017:intron | 35.0% |
| ! | TGTTGAAGCTTTTCCATTCT+TGG | + | chr1.1:6080121-6080140 | None:intergenic | 35.0% |
| ! | TGTTTGTTGCTAAGAGAGTT+TGG | + | chr1.1:6080774-6080793 | None:intergenic | 35.0% |
| !! | AACCATGGCTTTGATGAAAT+TGG | + | chr1.1:6081921-6081940 | None:intergenic | 35.0% |
| !! | ACCATGGCTTTGATGAAATT+GGG | + | chr1.1:6081920-6081939 | None:intergenic | 35.0% |
| !! | CTGCAAAAAGCATCACAAAT+AGG | - | chr1.1:6082123-6082142 | MS.gene33017:intron | 35.0% |
| !! | TAGGGTTAGGGTTTTGATAA+TGG | + | chr1.1:6082026-6082045 | None:intergenic | 35.0% |
| !! | TAGTTAGTTTGTTAGGGAAG+TGG | + | chr1.1:6080326-6080345 | None:intergenic | 35.0% |
| !! | TGATAATGGTTCAAATGGGT+TGG | + | chr1.1:6082012-6082031 | None:intergenic | 35.0% |
| !!! | GAATCAAGAAGCACTTTTTC+AGG | - | chr1.1:6080986-6081005 | MS.gene33017:intron | 35.0% |
| ACACTGATGCATAGTCACAT+AGG | - | chr1.1:6080531-6080550 | MS.gene33017:CDS | 40.0% | |
| ACGTGAGTTTGCATTAAGTG+GGG | + | chr1.1:6082183-6082202 | None:intergenic | 40.0% | |
| AGGTATGACATATAGTCGCT+TGG | + | chr1.1:6081724-6081743 | None:intergenic | 40.0% | |
| AGTGCTTCTTGATTCCAGTT+AGG | + | chr1.1:6080981-6081000 | None:intergenic | 40.0% | |
| ATGGCTTCACGTGAAGAAAT+AGG | - | chr1.1:6082219-6082238 | MS.gene33017:intron | 40.0% | |
| CACGTGAGTTTGCATTAAGT+GGG | + | chr1.1:6082184-6082203 | None:intergenic | 40.0% | |
| CGTGAAGAAATAGGAACTAC+TGG | - | chr1.1:6082228-6082247 | MS.gene33017:intron | 40.0% | |
| GGAAACAAAGTTGTAGGGTT+AGG | + | chr1.1:6082039-6082058 | None:intergenic | 40.0% | |
| GGTATGACATATAGTCGCTT+GGG | + | chr1.1:6081723-6081742 | None:intergenic | 40.0% | |
| TCCCAATTTCATCAAAGCCA+TGG | - | chr1.1:6081916-6081935 | MS.gene33017:intron | 40.0% | |
| TCTGATGATCGTGTTAGAGT+CGG | + | chr1.1:6080468-6080487 | None:intergenic | 40.0% | |
| TGCTTACCATGCAAACTCAA+AGG | + | chr1.1:6082579-6082598 | None:intergenic | 40.0% | |
| ! | AGAGAGGACATAATTTGCCA+TGG | - | chr1.1:6080854-6080873 | MS.gene33017:intron | 40.0% |
| ! | ATCTAGAACCACAAGCCAAA+AGG | - | chr1.1:6080142-6080161 | MS.gene33017:CDS | 40.0% |
| ! | GATGTGATGTATGGTAGTGA+GGG | - | chr1.1:6082333-6082352 | MS.gene33017:intron | 40.0% |
| ! | GTGTGATTTTATTACCTGGG+TGG | + | chr1.1:6080185-6080204 | None:intergenic | 40.0% |
| ! | TGATGTGATGTATGGTAGTG+AGG | - | chr1.1:6082332-6082351 | MS.gene33017:intron | 40.0% |
| !! | GTGATAGTGGTTGAAAACCA+TGG | + | chr1.1:6081936-6081955 | None:intergenic | 40.0% |
| !!! | AAGCACTTTTTCAGGAAGCA+CGG | - | chr1.1:6080994-6081013 | MS.gene33017:intron | 40.0% |
| !!! | TTTCTCTTCCTTTTGGCTTG+TGG | + | chr1.1:6080153-6080172 | None:intergenic | 40.0% |
| AGAGCTTAAGCCCGTAAACA+AGG | - | chr1.1:6081467-6081486 | MS.gene33017:intron | 45.0% | |
| GCACGTGAGTTTGCATTAAG+TGG | + | chr1.1:6082185-6082204 | None:intergenic | 45.0% | |
| GCTTCTTCAGCAACCAAGAA+TGG | - | chr1.1:6080105-6080124 | MS.gene33017:CDS | 45.0% | |
| GGGAGTGAGAAGAGAATAGA+GGG | + | chr1.1:6081900-6081919 | None:intergenic | 45.0% | |
| GTTATGCAGTTCAGTCGGAT+TGG | - | chr1.1:6081052-6081071 | MS.gene33017:intron | 45.0% | |
| TACTGCTGCTATGAGCATGA+GGG | - | chr1.1:6082380-6082399 | MS.gene33017:intron | 45.0% | |
| TGCATTAAGTGGGGTCTACA+AGG | + | chr1.1:6082174-6082193 | None:intergenic | 45.0% | |
| TGGGAGTGAGAAGAGAATAG+AGG | + | chr1.1:6081901-6081920 | None:intergenic | 45.0% | |
| TGTTCACCATGACCCTTCAA+GGG | - | chr1.1:6080945-6080964 | MS.gene33017:intron | 45.0% | |
| TTACTGCTGCTATGAGCATG+AGG | - | chr1.1:6082379-6082398 | MS.gene33017:intron | 45.0% | |
| ! | ATTTTATTACCTGGGTGGCC+AGG | + | chr1.1:6080180-6080199 | None:intergenic | 45.0% |
| ! | GATGGTCCTTTGAGTTTGCA+TGG | - | chr1.1:6082570-6082589 | MS.gene33017:CDS | 45.0% |
| !! | TGCTTTTTGCAGCAAAGCAG+TGG | + | chr1.1:6082115-6082134 | None:intergenic | 45.0% |
| !!! | TGGTTTTGTTTCAGACCCTG+AGG | - | chr1.1:6080726-6080745 | MS.gene33017:CDS | 45.0% |
| !! | ATAAAAAAAAATAAAAATCA+AGG | + | chr1.1:6081440-6081459 | None:intergenic | 5.0% |
| !! | ATATAACATTAATATATAAT+AGG | + | chr1.1:6080664-6080683 | None:intergenic | 5.0% |
| AAAGCAGTGGCAGACATGTG+AGG | + | chr1.1:6082102-6082121 | None:intergenic | 50.0% | |
| AAAGCTAGCACTTGTGCCTC+AGG | + | chr1.1:6080745-6080764 | None:intergenic | 50.0% | |
| AACTCACGTGCCTTCAGGAA+TGG | - | chr1.1:6082194-6082213 | MS.gene33017:intron | 50.0% | |
| AAGCTAGCACTTGTGCCTCA+GGG | + | chr1.1:6080744-6080763 | None:intergenic | 50.0% | |
| ACTGCTGCTATGAGCATGAG+GGG | - | chr1.1:6082381-6082400 | MS.gene33017:intron | 50.0% | |
| ACTGTGGAACCCTCTTCTCA+AGG | - | chr1.1:6081118-6081137 | MS.gene33017:intron | 50.0% | |
| ATGCAAACTCACGTGCCTTC+AGG | - | chr1.1:6082189-6082208 | MS.gene33017:intron | 50.0% | |
| GAAGCCATAGCCATTCCTGA+AGG | + | chr1.1:6082207-6082226 | None:intergenic | 50.0% | |
| GGGTCATGGTGAACACATGT+TGG | + | chr1.1:6080940-6080959 | None:intergenic | 50.0% | |
| GTCACATAGGTAGCACCATG+AGG | - | chr1.1:6080544-6080563 | MS.gene33017:CDS | 50.0% | |
| GTGTTCACCATGACCCTTCA+AGG | - | chr1.1:6080944-6080963 | MS.gene33017:intron | 50.0% | |
| ! | TGGGTTGGGAGTAACCATGA+TGG | + | chr1.1:6081997-6082016 | None:intergenic | 50.0% |
| !! | TGGTGAACACATGTTGGCTC+TGG | + | chr1.1:6080934-6080953 | None:intergenic | 50.0% |
| AGAAATCTTCCTGGCCACCC+AGG | - | chr1.1:6080168-6080187 | MS.gene33017:CDS | 55.0% | |
| AGGTCACCAAGTGCCCTTGA+AGG | + | chr1.1:6080961-6080980 | None:intergenic | 55.0% | |
| CAAGTGCCCTTGAAGGGTCA+TGG | + | chr1.1:6080954-6080973 | None:intergenic | 55.0% | |
| CGTGCCTTCAGGAATGGCTA+TGG | - | chr1.1:6082200-6082219 | MS.gene33017:intron | 55.0% | |
| GGTCACCAAGTGCCCTTGAA+GGG | + | chr1.1:6080960-6080979 | None:intergenic | 55.0% | |
| TAGTCGCTTGGGTAGAGCGT+TGG | + | chr1.1:6081712-6081731 | None:intergenic | 55.0% | |
| ! | AGGGCACTTGGTGACCTAAC+TGG | - | chr1.1:6080964-6080983 | MS.gene33017:intron | 55.0% |
| ! | GGAAGCACGGTGAGAAGAAG+TGG | - | chr1.1:6081007-6081026 | MS.gene33017:intron | 55.0% |
| !! | CATGACCCTTCAAGGGCACT+TGG | - | chr1.1:6080952-6080971 | MS.gene33017:intron | 55.0% |
| ! | AGCACCATGAGGTGCTCCCT+TGG | - | chr1.1:6080555-6080574 | MS.gene33017:CDS | 60.0% |
| !! | GTAGCCAAGGGAGCACCTCA+TGG | + | chr1.1:6080562-6080581 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 6080039 | 6082617 | 6080039 | ID=MS.gene33017 |
| chr1.1 | mRNA | 6080039 | 6082617 | 6080039 | ID=MS.gene33017.t1;Parent=MS.gene33017 |
| chr1.1 | exon | 6082467 | 6082617 | 6082467 | ID=MS.gene33017.t1.exon1;Parent=MS.gene33017.t1 |
| chr1.1 | CDS | 6082467 | 6082617 | 6082467 | ID=cds.MS.gene33017.t1;Parent=MS.gene33017.t1 |
| chr1.1 | exon | 6081517 | 6081916 | 6081517 | ID=MS.gene33017.t1.exon2;Parent=MS.gene33017.t1 |
| chr1.1 | CDS | 6081517 | 6081916 | 6081517 | ID=cds.MS.gene33017.t1;Parent=MS.gene33017.t1 |
| chr1.1 | exon | 6080039 | 6080834 | 6080039 | ID=MS.gene33017.t1.exon3;Parent=MS.gene33017.t1 |
| chr1.1 | CDS | 6080039 | 6080834 | 6080039 | ID=cds.MS.gene33017.t1;Parent=MS.gene33017.t1 |
| Gene Sequence |
| Protein sequence |
