Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70154.t1 | XP_003630390.1 | 97.3 | 641 | 16 | 1 | 1 | 641 | 1 | 640 | 0.00E+00 | 1143.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70154.t1 | G7LFS2 | 97.3 | 641 | 16 | 1 | 1 | 641 | 1 | 640 | 0.0e+00 | 1143.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene70154 | 0.856639 | 2.81E-62 | -1.69E-46 |
| MS.gene04919 | MS.gene70154 | 0.847189 | 1.35E-59 | -1.69E-46 |
| MS.gene04920 | MS.gene70154 | 0.868274 | 7.38E-66 | -1.69E-46 |
| MS.gene049254 | MS.gene70154 | 0.803377 | 3.59E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene70154 | 0.886146 | 4.41E-72 | -1.69E-46 |
| MS.gene049368 | MS.gene70154 | 0.83 | 3.76E-55 | -1.69E-46 |
| MS.gene049419 | MS.gene70154 | -0.831867 | 1.31E-55 | -1.69E-46 |
| MS.gene049499 | MS.gene70154 | 0.86017 | 2.49E-63 | -1.69E-46 |
| MS.gene049680 | MS.gene70154 | 0.842592 | 2.35E-58 | -1.69E-46 |
| MS.gene049983 | MS.gene70154 | 0.860343 | 2.21E-63 | -1.69E-46 |
| MS.gene04998 | MS.gene70154 | 0.822246 | 2.62E-53 | -1.69E-46 |
| MS.gene050085 | MS.gene70154 | 0.805019 | 1.63E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene70154 | 0.825863 | 3.72E-54 | -1.69E-46 |
| MS.gene050414 | MS.gene70154 | 0.830779 | 2.42E-55 | -1.69E-46 |
| MS.gene050571 | MS.gene70154 | 0.811727 | 6.06E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene70154 | 0.844806 | 6.02E-59 | -1.69E-46 |
| MS.gene050654 | MS.gene70154 | 0.862256 | 5.76E-64 | -1.69E-46 |
| MS.gene050941 | MS.gene70154 | 0.831768 | 1.38E-55 | -1.69E-46 |
| MS.gene050945 | MS.gene70154 | 0.84693 | 1.59E-59 | -1.69E-46 |
| MS.gene051003 | MS.gene70154 | 0.866797 | 2.19E-65 | -1.69E-46 |
| MS.gene051043 | MS.gene70154 | 0.834451 | 2.97E-56 | -1.69E-46 |
| MS.gene051154 | MS.gene70154 | 0.832255 | 1.05E-55 | -1.69E-46 |
| MS.gene051184 | MS.gene70154 | 0.824943 | 6.14E-54 | -1.69E-46 |
| MS.gene051234 | MS.gene70154 | 0.841941 | 3.50E-58 | -1.69E-46 |
| MS.gene051275 | MS.gene70154 | 0.80279 | 4.75E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene70154 | 0.851097 | 1.11E-60 | -1.69E-46 |
| MS.gene051597 | MS.gene70154 | 0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene051637 | MS.gene70154 | 0.801888 | 7.28E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene70154 | 0.819566 | 1.09E-52 | -1.69E-46 |
| MS.gene051699 | MS.gene70154 | 0.856848 | 2.44E-62 | -1.69E-46 |
| MS.gene051831 | MS.gene70154 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene051848 | MS.gene70154 | -0.826608 | 2.47E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene70154 | 0.800795 | 1.22E-48 | -1.69E-46 |
| MS.gene051902 | MS.gene70154 | 0.806799 | 6.90E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene70154 | 0.839953 | 1.16E-57 | -1.69E-46 |
| MS.gene052016 | MS.gene70154 | 0.805918 | 1.06E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene70154 | 0.831188 | 1.92E-55 | -1.69E-46 |
| MS.gene052118 | MS.gene70154 | 0.831765 | 1.39E-55 | -1.69E-46 |
| MS.gene052242 | MS.gene70154 | -0.805889 | 1.07E-49 | -1.69E-46 |
| MS.gene052296 | MS.gene70154 | 0.829422 | 5.19E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene70154 | 0.829325 | 5.48E-55 | -1.69E-46 |
| MS.gene052342 | MS.gene70154 | 0.834249 | 3.34E-56 | -1.69E-46 |
| MS.gene052434 | MS.gene70154 | 0.81159 | 6.49E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene70154 | 0.81368 | 2.26E-51 | -1.69E-46 |
| MS.gene052518 | MS.gene70154 | 0.845247 | 4.57E-59 | -1.69E-46 |
| MS.gene052533 | MS.gene70154 | 0.835887 | 1.29E-56 | -1.69E-46 |
| MS.gene052793 | MS.gene70154 | 0.806112 | 9.63E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene70154 | 0.80902 | 2.33E-50 | -1.69E-46 |
| MS.gene052888 | MS.gene70154 | 0.815074 | 1.11E-51 | -1.69E-46 |
| MS.gene052889 | MS.gene70154 | 0.828975 | 6.67E-55 | -1.69E-46 |
| MS.gene052890 | MS.gene70154 | 0.803178 | 3.95E-49 | -1.69E-46 |
| MS.gene052932 | MS.gene70154 | 0.812938 | 3.30E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene70154 | 0.827391 | 1.61E-54 | -1.69E-46 |
| MS.gene053228 | MS.gene70154 | 0.824869 | 6.39E-54 | -1.69E-46 |
| MS.gene053272 | MS.gene70154 | -0.83384 | 4.23E-56 | -1.69E-46 |
| MS.gene053295 | MS.gene70154 | 0.8235 | 1.34E-53 | -1.69E-46 |
| MS.gene053298 | MS.gene70154 | 0.837431 | 5.22E-57 | -1.69E-46 |
| MS.gene053456 | MS.gene70154 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene053564 | MS.gene70154 | 0.830249 | 3.27E-55 | -1.69E-46 |
| MS.gene053575 | MS.gene70154 | 0.80039 | 1.47E-48 | -1.69E-46 |
| MS.gene053726 | MS.gene70154 | 0.830154 | 3.45E-55 | -1.69E-46 |
| MS.gene053879 | MS.gene70154 | 0.878966 | 1.83E-69 | -1.69E-46 |
| MS.gene053931 | MS.gene70154 | 0.824534 | 7.66E-54 | -1.69E-46 |
| MS.gene053963 | MS.gene70154 | 0.834851 | 2.36E-56 | -1.69E-46 |
| MS.gene054004 | MS.gene70154 | 0.836312 | 1.01E-56 | -1.69E-46 |
| MS.gene054178 | MS.gene70154 | 0.806676 | 7.33E-50 | -1.69E-46 |
| MS.gene054222 | MS.gene70154 | 0.824749 | 6.82E-54 | -1.69E-46 |
| MS.gene054403 | MS.gene70154 | 0.802562 | 5.29E-49 | -1.69E-46 |
| MS.gene054413 | MS.gene70154 | 0.810508 | 1.11E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene70154 | 0.81844 | 1.96E-52 | -1.69E-46 |
| MS.gene05469 | MS.gene70154 | 0.826915 | 2.09E-54 | -1.69E-46 |
| MS.gene054892 | MS.gene70154 | 0.879147 | 1.58E-69 | -1.69E-46 |
| MS.gene054893 | MS.gene70154 | 0.890854 | 6.76E-74 | -1.69E-46 |
| MS.gene054957 | MS.gene70154 | 0.8507 | 1.43E-60 | -1.69E-46 |
| MS.gene055147 | MS.gene70154 | 0.805545 | 1.27E-49 | -1.69E-46 |
| MS.gene055148 | MS.gene70154 | 0.80028 | 1.55E-48 | -1.69E-46 |
| MS.gene055150 | MS.gene70154 | 0.869661 | 2.62E-66 | -1.69E-46 |
| MS.gene05517 | MS.gene70154 | 0.80087 | 1.18E-48 | -1.69E-46 |
| MS.gene055222 | MS.gene70154 | 0.819049 | 1.42E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene70154 | 0.841763 | 3.90E-58 | -1.69E-46 |
| MS.gene055841 | MS.gene70154 | 0.818082 | 2.36E-52 | -1.69E-46 |
| MS.gene055864 | MS.gene70154 | 0.808038 | 3.77E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene70154 | 0.815814 | 7.62E-52 | -1.69E-46 |
| MS.gene056071 | MS.gene70154 | 0.830848 | 2.33E-55 | -1.69E-46 |
| MS.gene056181 | MS.gene70154 | 0.817049 | 4.03E-52 | -1.69E-46 |
| MS.gene05624 | MS.gene70154 | 0.83446 | 2.96E-56 | -1.69E-46 |
| MS.gene056677 | MS.gene70154 | 0.805182 | 1.51E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene70154 | 0.844778 | 6.12E-59 | -1.69E-46 |
| MS.gene056787 | MS.gene70154 | 0.801813 | 7.54E-49 | -1.69E-46 |
| MS.gene056831 | MS.gene70154 | 0.806239 | 9.06E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene70154 | 0.818778 | 1.64E-52 | -1.69E-46 |
| MS.gene05689 | MS.gene70154 | 0.821704 | 3.51E-53 | -1.69E-46 |
| MS.gene05690 | MS.gene70154 | 0.818463 | 1.94E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene70154 | 0.838713 | 2.44E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene70154 | 0.868046 | 8.73E-66 | -1.69E-46 |
| MS.gene057155 | MS.gene70154 | 0.812804 | 3.52E-51 | -1.69E-46 |
| MS.gene057174 | MS.gene70154 | 0.812925 | 3.32E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene70154 | 0.850225 | 1.95E-60 | -1.69E-46 |
| MS.gene057622 | MS.gene70154 | 0.867113 | 1.74E-65 | -1.69E-46 |
| MS.gene057890 | MS.gene70154 | -0.852114 | 5.71E-61 | -1.69E-46 |
| MS.gene057893 | MS.gene70154 | -0.824087 | 9.76E-54 | -1.69E-46 |
| MS.gene057999 | MS.gene70154 | 0.828081 | 1.10E-54 | -1.69E-46 |
| MS.gene058008 | MS.gene70154 | 0.821685 | 3.54E-53 | -1.69E-46 |
| MS.gene058095 | MS.gene70154 | 0.867572 | 1.24E-65 | -1.69E-46 |
| MS.gene058159 | MS.gene70154 | 0.876435 | 1.40E-68 | -1.69E-46 |
| MS.gene058279 | MS.gene70154 | 0.818711 | 1.70E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene70154 | 0.814839 | 1.26E-51 | -1.69E-46 |
| MS.gene058429 | MS.gene70154 | 0.834511 | 2.87E-56 | -1.69E-46 |
| MS.gene058592 | MS.gene70154 | 0.872198 | 3.82E-67 | -1.69E-46 |
| MS.gene058708 | MS.gene70154 | -0.804149 | 2.48E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene70154 | 0.84579 | 3.26E-59 | -1.69E-46 |
| MS.gene058783 | MS.gene70154 | 0.814043 | 1.88E-51 | -1.69E-46 |
| MS.gene05878 | MS.gene70154 | 0.854752 | 9.98E-62 | -1.69E-46 |
| MS.gene059144 | MS.gene70154 | 0.801429 | 9.04E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene70154 | 0.881532 | 2.22E-70 | -1.69E-46 |
| MS.gene059170 | MS.gene70154 | 0.843762 | 1.15E-58 | -1.69E-46 |
| MS.gene05952 | MS.gene70154 | 0.898657 | 4.28E-77 | -1.69E-46 |
| MS.gene05956 | MS.gene70154 | 0.837495 | 5.03E-57 | -1.69E-46 |
| MS.gene05985 | MS.gene70154 | -0.889223 | 2.93E-73 | -1.69E-46 |
| MS.gene059901 | MS.gene70154 | -0.866534 | 2.66E-65 | -1.69E-46 |
| MS.gene06011 | MS.gene70154 | 0.825016 | 5.90E-54 | -1.69E-46 |
| MS.gene06023 | MS.gene70154 | 0.826046 | 3.36E-54 | -1.69E-46 |
| MS.gene060244 | MS.gene70154 | 0.820952 | 5.22E-53 | -1.69E-46 |
| MS.gene060259 | MS.gene70154 | 0.856675 | 2.74E-62 | -1.69E-46 |
| MS.gene060365 | MS.gene70154 | 0.81002 | 1.42E-50 | -1.69E-46 |
| MS.gene060412 | MS.gene70154 | 0.820318 | 7.31E-53 | -1.69E-46 |
| MS.gene060435 | MS.gene70154 | 0.814971 | 1.17E-51 | -1.69E-46 |
| MS.gene060522 | MS.gene70154 | 0.834808 | 2.42E-56 | -1.69E-46 |
| MS.gene060763 | MS.gene70154 | 0.830204 | 3.35E-55 | -1.69E-46 |
| MS.gene060777 | MS.gene70154 | 0.819727 | 9.98E-53 | -1.69E-46 |
| MS.gene060840 | MS.gene70154 | 0.814024 | 1.90E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene70154 | 0.85264 | 4.04E-61 | -1.69E-46 |
| MS.gene060933 | MS.gene70154 | 0.85147 | 8.69E-61 | -1.69E-46 |
| MS.gene060935 | MS.gene70154 | 0.866148 | 3.52E-65 | -1.69E-46 |
| MS.gene060937 | MS.gene70154 | 0.882724 | 8.19E-71 | -1.69E-46 |
| MS.gene061100 | MS.gene70154 | 0.88649 | 3.27E-72 | -1.69E-46 |
| MS.gene061160 | MS.gene70154 | 0.848017 | 8.01E-60 | -1.69E-46 |
| MS.gene061188 | MS.gene70154 | 0.822218 | 2.66E-53 | -1.69E-46 |
| MS.gene061243 | MS.gene70154 | 0.800872 | 1.18E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70154.t1 | MTR_8g095080 | 97.504 | 641 | 15 | 1 | 1 | 641 | 1 | 640 | 0.0 | 1280 |
| MS.gene70154.t1 | MTR_8g095080 | 98.097 | 473 | 8 | 1 | 1 | 473 | 1 | 472 | 0.0 | 954 |
| MS.gene70154.t1 | MTR_3g097240 | 71.479 | 568 | 145 | 6 | 74 | 641 | 73 | 623 | 0.0 | 766 |
| MS.gene70154.t1 | MTR_1g096970 | 63.838 | 542 | 184 | 6 | 102 | 638 | 2 | 536 | 0.0 | 672 |
| MS.gene70154.t1 | MTR_3g097240 | 75.584 | 385 | 80 | 4 | 74 | 458 | 73 | 443 | 0.0 | 585 |
| MS.gene70154.t1 | MTR_3g097240 | 74.167 | 360 | 79 | 4 | 74 | 433 | 73 | 418 | 0.0 | 535 |
| MS.gene70154.t1 | MTR_3g114010 | 45.908 | 501 | 233 | 7 | 101 | 579 | 76 | 560 | 1.26e-143 | 431 |
| MS.gene70154.t1 | MTR_1g025340 | 49.268 | 410 | 200 | 3 | 106 | 513 | 86 | 489 | 6.66e-126 | 385 |
| MS.gene70154.t1 | MTR_0318s0020 | 25.551 | 454 | 257 | 12 | 151 | 532 | 128 | 572 | 4.51e-28 | 119 |
| MS.gene70154.t1 | MTR_1g044135 | 29.187 | 209 | 138 | 2 | 151 | 356 | 43 | 244 | 9.57e-17 | 84.3 |
| MS.gene70154.t1 | MTR_1g044135 | 28.966 | 145 | 90 | 3 | 374 | 514 | 440 | 575 | 2.54e-13 | 73.6 |
| MS.gene70154.t1 | MTR_1g073890 | 27.907 | 215 | 146 | 2 | 151 | 362 | 46 | 254 | 1.84e-16 | 83.6 |
| MS.gene70154.t1 | MTR_1g073890 | 30.137 | 146 | 87 | 3 | 374 | 514 | 410 | 545 | 1.07e-12 | 71.6 |
| MS.gene70154.t1 | MTR_6g461910 | 27.570 | 214 | 147 | 3 | 151 | 360 | 36 | 245 | 1.68e-13 | 73.9 |
| MS.gene70154.t1 | MTR_6g461910 | 33.333 | 141 | 83 | 3 | 374 | 511 | 356 | 488 | 4.15e-13 | 72.4 |
| MS.gene70154.t1 | MTR_1g092540 | 24.528 | 212 | 148 | 4 | 150 | 356 | 25 | 229 | 1.87e-13 | 73.9 |
| MS.gene70154.t1 | MTR_1g092540 | 31.250 | 144 | 86 | 3 | 372 | 511 | 433 | 567 | 2.74e-13 | 73.6 |
| MS.gene70154.t1 | MTR_1g061540 | 30.070 | 143 | 87 | 3 | 374 | 514 | 387 | 518 | 9.56e-13 | 71.6 |
| MS.gene70154.t1 | MTR_3g091180 | 29.801 | 151 | 88 | 4 | 372 | 514 | 424 | 564 | 1.90e-11 | 67.4 |
| MS.gene70154.t1 | MTR_7g103490 | 37.500 | 88 | 55 | 0 | 151 | 238 | 29 | 116 | 4.86e-11 | 66.2 |
| MS.gene70154.t1 | MTR_4g021260 | 27.189 | 217 | 144 | 4 | 151 | 357 | 19 | 231 | 9.80e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70154.t1 | AT1G34320 | 56.297 | 659 | 266 | 10 | 1 | 641 | 1 | 655 | 0.0 | 701 |
| MS.gene70154.t1 | AT1G34320 | 56.297 | 659 | 266 | 10 | 1 | 641 | 1 | 655 | 0.0 | 701 |
| MS.gene70154.t1 | AT5G08660 | 52.824 | 655 | 276 | 8 | 1 | 641 | 1 | 636 | 0.0 | 616 |
| MS.gene70154.t1 | AT5G08660 | 52.824 | 655 | 276 | 8 | 1 | 641 | 1 | 636 | 0.0 | 616 |
| MS.gene70154.t1 | AT5G08660 | 52.824 | 655 | 276 | 8 | 1 | 641 | 1 | 636 | 0.0 | 616 |
| MS.gene70154.t1 | AT5G08660 | 57.231 | 484 | 183 | 4 | 1 | 473 | 1 | 471 | 3.96e-179 | 516 |
| MS.gene70154.t1 | AT1G30755 | 48.723 | 470 | 228 | 5 | 101 | 563 | 83 | 546 | 7.64e-143 | 429 |
| MS.gene70154.t1 | AT1G30755 | 48.723 | 470 | 228 | 5 | 101 | 563 | 83 | 546 | 7.64e-143 | 429 |
| MS.gene70154.t1 | AT1G30755 | 48.723 | 470 | 228 | 5 | 101 | 563 | 83 | 546 | 7.64e-143 | 429 |
| MS.gene70154.t1 | AT1G30755 | 52.279 | 373 | 175 | 2 | 101 | 472 | 83 | 453 | 1.06e-128 | 387 |
| MS.gene70154.t1 | AT1G30755 | 51.253 | 359 | 172 | 2 | 101 | 458 | 83 | 439 | 3.13e-117 | 357 |
| MS.gene70154.t1 | AT1G30755 | 51.253 | 359 | 172 | 2 | 101 | 458 | 83 | 439 | 3.13e-117 | 357 |
| MS.gene70154.t1 | AT5G51670 | 24.235 | 425 | 260 | 7 | 146 | 513 | 32 | 451 | 7.17e-23 | 102 |
| MS.gene70154.t1 | AT5G51670 | 24.235 | 425 | 260 | 7 | 146 | 513 | 32 | 451 | 7.17e-23 | 102 |
| MS.gene70154.t1 | AT3G23160 | 28.708 | 209 | 140 | 2 | 151 | 356 | 43 | 245 | 1.05e-16 | 84.0 |
| MS.gene70154.t1 | AT3G23160 | 31.724 | 145 | 87 | 3 | 374 | 514 | 361 | 497 | 1.75e-13 | 73.9 |
Find 114 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATAGTGTTCTTCCTTCT+TGG | 0.214550 | 4.1:+7599290 | None:intergenic |
| TTGCTGATGGTTCGAATAAA+TGG | 0.240623 | 4.1:+7594415 | None:intergenic |
| AGTGCTTAACCTGCTTCTTT+TGG | 0.267827 | 4.1:+7595124 | None:intergenic |
| TGCAGAGCGCATCACGGTTT+TGG | 0.282124 | 4.1:-7593113 | MS.gene70154:intron |
| GGACTTTGACAGTCTGAAAA+TGG | 0.283201 | 4.1:-7592636 | MS.gene70154:CDS |
| AGTAACAAAATTCCTGTTAG+AGG | 0.287347 | 4.1:-7592680 | MS.gene70154:CDS |
| AGATTTAGTATCAAAGGATA+TGG | 0.300423 | 4.1:-7597236 | MS.gene70154:CDS |
| GGGTGTGGATAGTAAGAAAA+AGG | 0.306250 | 4.1:-7599196 | MS.gene70154:CDS |
| GGCTACCTCCTCCAAACTTC+TGG | 0.310516 | 4.1:+7595080 | None:intergenic |
| TCTGATGAGGTGATTCGTTT+TGG | 0.312370 | 4.1:-7597058 | MS.gene70154:CDS |
| AACATGAAATGTAGGTAATT+TGG | 0.317265 | 4.1:+7593823 | None:intergenic |
| GTCACTCTGGTCCAGAAGTT+TGG | 0.335880 | 4.1:-7595091 | MS.gene70154:CDS |
| AGTGTATCCCTTGTATTTGC+AGG | 0.358116 | 4.1:+7593887 | None:intergenic |
| AGCATGACAAATTTAAATTC+TGG | 0.359223 | 4.1:-7597421 | MS.gene70154:CDS |
| CTAGGCAGAGCTGGCACTAT+TGG | 0.364186 | 4.1:-7597484 | MS.gene70154:CDS |
| CAAGTCTACAAAAGGTAATA+AGG | 0.364781 | 4.1:-7599319 | MS.gene70154:CDS |
| AGGATATGGACGAACTTCTA+AGG | 0.365311 | 4.1:-7597222 | MS.gene70154:CDS |
| TCTGGCGGTGGCTTTGCATA+TGG | 0.369637 | 4.1:-7597403 | MS.gene70154:CDS |
| TCTCTTGTGGCTTCACCGCT+TGG | 0.373772 | 4.1:-7592855 | MS.gene70154:CDS |
| CACTATGGTAATCATAAATC+TGG | 0.382794 | 4.1:-7599276 | MS.gene70154:CDS |
| ATACCATGAGTTACATGCTT+TGG | 0.387151 | 4.1:-7595605 | MS.gene70154:CDS |
| AGAAGAGGTGCTTAAGTTAG+AGG | 0.388917 | 4.1:-7597266 | MS.gene70154:CDS |
| GCCCTGCAGGACCCAATCTT+TGG | 0.389603 | 4.1:+7594389 | None:intergenic |
| CATCAGCAATCGCCAAAGAT+TGG | 0.396750 | 4.1:-7594401 | MS.gene70154:CDS |
| AGAGCTGGCACTATTGGATT+CGG | 0.398439 | 4.1:-7597478 | MS.gene70154:CDS |
| CGCCAAAGATTGGGTCCTGC+AGG | 0.405769 | 4.1:-7594391 | MS.gene70154:CDS |
| TGGTTCGAATAAATGGTTTA+CGG | 0.411166 | 4.1:+7594422 | None:intergenic |
| AGGAATGATGATTTCTATGA+TGG | 0.418073 | 4.1:-7599129 | MS.gene70154:CDS |
| TACTTACTAGAGTATCCATT+TGG | 0.418537 | 4.1:+7594338 | None:intergenic |
| TTGGAGATAAATAAAGCCTT+TGG | 0.420581 | 4.1:-7594806 | MS.gene70154:CDS |
| GTTGGAGAGTGGGCAAGCAC+TGG | 0.422682 | 4.1:-7593086 | MS.gene70154:CDS |
| TTGGCTGTGTTTGTAGCAAT+TGG | 0.429155 | 4.1:+7593258 | None:intergenic |
| TGTATTTGCAGGCATAGAAC+TGG | 0.429803 | 4.1:+7593898 | None:intergenic |
| CGATAGCCTGTCAATCTTGA+AGG | 0.439047 | 4.1:-7595160 | MS.gene70154:CDS |
| GAGCTGGCACTATTGGATTC+GGG | 0.443156 | 4.1:-7597477 | MS.gene70154:CDS |
| GAATAGTCCCATATATTATC+TGG | 0.443168 | 4.1:+7592454 | None:intergenic |
| CTTGTGGCTTCACCGCTTGG+CGG | 0.452374 | 4.1:-7592852 | MS.gene70154:CDS |
| CACTGTAGCAGATATTAAAC+AGG | 0.455035 | 4.1:-7593310 | MS.gene70154:CDS |
| CAATCTTTGGCGATTGCTGA+TGG | 0.459530 | 4.1:+7594402 | None:intergenic |
| TGCAAATATAGTGCTCCAAA+TGG | 0.466071 | 4.1:-7594353 | MS.gene70154:CDS |
| ATCAGCAATCGCCAAAGATT+GGG | 0.466852 | 4.1:-7594400 | MS.gene70154:CDS |
| CTTTGTTCCAAGTCTACAAA+AGG | 0.469105 | 4.1:-7599327 | MS.gene70154:CDS |
| TGCAGGCATAGAACTGGATC+TGG | 0.477034 | 4.1:+7593904 | None:intergenic |
| AATAAAGCCTTTGGCAGTGC+AGG | 0.481849 | 4.1:-7594797 | MS.gene70154:intron |
| GATCATTAAAAGTAAAAGCT+TGG | 0.481852 | 4.1:-7592657 | MS.gene70154:CDS |
| TACATTTCATGTTGCAGAAG+AGG | 0.484223 | 4.1:-7593813 | MS.gene70154:intron |
| GGATCCTCAGTGGCACAACT+TGG | 0.485426 | 4.1:-7597023 | MS.gene70154:CDS |
| GTTCTGCCTTCAAGATTGAC+AGG | 0.490831 | 4.1:+7595154 | None:intergenic |
| GCATATGGAGCTGTAACAAA+GGG | 0.491949 | 4.1:-7597388 | MS.gene70154:CDS |
| AGTTCACGCCTAGGCAGAGC+TGG | 0.493448 | 4.1:-7597493 | MS.gene70154:CDS |
| CCGCTTGGCGGTCAAAAGTA+AGG | 0.494542 | 4.1:-7592840 | MS.gene70154:CDS |
| GTTCTATGCCTGCAAATACA+AGG | 0.505891 | 4.1:-7593895 | MS.gene70154:CDS |
| TGTCAAGGGCTTTAGTCTCA+TGG | 0.508920 | 4.1:-7597323 | MS.gene70154:CDS |
| AAGACAAGCTGCTGTTGCTA+AGG | 0.512156 | 4.1:-7599055 | MS.gene70154:intron |
| GACTTCTCCAACATCACCTC+CGG | 0.514412 | 4.1:+7592817 | None:intergenic |
| ACTTAGAAGCCAAAAGAAGC+AGG | 0.515237 | 4.1:-7595133 | MS.gene70154:CDS |
| TCTTCTGCAACATGAAATGT+AGG | 0.515563 | 4.1:+7593815 | None:intergenic |
| AGTAAGGCCGGAGGTGATGT+TGG | 0.515673 | 4.1:-7592824 | MS.gene70154:CDS |
| TAATGCAAAGAGAGCCCTGC+AGG | 0.516772 | 4.1:+7594376 | None:intergenic |
| AGCAGATATTAAACAGGAGA+TGG | 0.519050 | 4.1:-7593304 | MS.gene70154:CDS |
| GATGAGTTTAGTTCAACATA+CGG | 0.524002 | 4.1:-7596808 | MS.gene70154:CDS |
| TTGGTGTTGCTGCAGAAACT+AGG | 0.524480 | 4.1:-7599149 | MS.gene70154:CDS |
| ACCAAGAAGGAAGAACACTA+TGG | 0.524865 | 4.1:-7599291 | MS.gene70154:CDS |
| TCACCATGCAGATAAAGAAA+AGG | 0.528930 | 4.1:-7592900 | MS.gene70154:CDS |
| TATTAAACATTTGAAAGAAG+AGG | 0.530195 | 4.1:-7597281 | MS.gene70154:CDS |
| TGTTCAAGATTTAGTATCAA+AGG | 0.536250 | 4.1:-7597242 | MS.gene70154:CDS |
| GTAACAAAGGGGAACGAAGT+TGG | 0.536469 | 4.1:-7597376 | MS.gene70154:CDS |
| GGTAATCATAAATCTGGTGT+TGG | 0.537321 | 4.1:-7599270 | MS.gene70154:CDS |
| TGCTCATCGGTTGTTAGCAA+TGG | 0.540892 | 4.1:+7592722 | None:intergenic |
| CAATAGTGCCAGCTCTGCCT+AGG | 0.543379 | 4.1:+7597485 | None:intergenic |
| TTGGAGAGTGGGCAAGCACT+GGG | 0.543558 | 4.1:-7593085 | MS.gene70154:intron |
| TGCATATGGAGCTGTAACAA+AGG | 0.543642 | 4.1:-7597389 | MS.gene70154:CDS |
| TGTTTCAATCCGCATTACTT+CGG | 0.546642 | 4.1:+7592925 | None:intergenic |
| GACAAGTGCAAAGGAGGGTG+TGG | 0.549385 | 4.1:-7599211 | MS.gene70154:CDS |
| ACAAATTTAAATTCTGGCGG+TGG | 0.549754 | 4.1:-7597415 | MS.gene70154:CDS |
| TGATTTGACAAGTGCAAAGG+AGG | 0.552376 | 4.1:-7599217 | MS.gene70154:CDS |
| CTTCAGCATGATCTGCTCAT+CGG | 0.555626 | 4.1:+7592709 | None:intergenic |
| ATATTCTTGAACTTCTCTTG+TGG | 0.555712 | 4.1:-7592868 | MS.gene70154:CDS |
| TCAAAGACAAACAAAAGAAG+AGG | 0.561166 | 4.1:-7596853 | MS.gene70154:CDS |
| TATCCAAAGCATGTAACTCA+TGG | 0.568232 | 4.1:+7595602 | None:intergenic |
| GTAACAAAATTCCTGTTAGA+GGG | 0.569393 | 4.1:-7592679 | MS.gene70154:CDS |
| TAATAAGGCTTTAACCAAGA+AGG | 0.570936 | 4.1:-7599304 | MS.gene70154:CDS |
| TTGGCGGTCAAAAGTAAGGC+CGG | 0.572795 | 4.1:-7592836 | MS.gene70154:CDS |
| GGTTGCAAACACTATTGTCA+AGG | 0.574498 | 4.1:-7597338 | MS.gene70154:CDS |
| GGAATGATGATTTCTATGAT+GGG | 0.579366 | 4.1:-7599128 | MS.gene70154:CDS |
| ACTCTGGTCCAGAAGTTTGG+AGG | 0.584664 | 4.1:-7595088 | MS.gene70154:CDS |
| GTTGACGTTCTAGACACACT+TGG | 0.587915 | 4.1:-7597448 | MS.gene70154:CDS |
| ACTTGAAGAAGAAGTCACTC+TGG | 0.601104 | 4.1:-7595104 | MS.gene70154:CDS |
| CGATGAGCAGATCATGCTGA+AGG | 0.606428 | 4.1:-7592708 | MS.gene70154:CDS |
| TAGTGATTTGACAAGTGCAA+AGG | 0.607913 | 4.1:-7599220 | MS.gene70154:CDS |
| GTTGCAAACACTATTGTCAA+GGG | 0.609003 | 4.1:-7597337 | MS.gene70154:CDS |
| GGATTGTTGCTGCAGACAAG+AGG | 0.610168 | 4.1:-7597201 | MS.gene70154:intron |
| CTCAACGACAAGTAGAAGCA+AGG | 0.611322 | 4.1:-7592573 | MS.gene70154:CDS |
| GTACATACCTGCACTGCCAA+AGG | 0.611468 | 4.1:+7594790 | None:intergenic |
| CTGGTCCAGAAGTTTGGAGG+AGG | 0.611782 | 4.1:-7595085 | MS.gene70154:intron |
| TTGACGTTCTAGACACACTT+GGG | 0.616300 | 4.1:-7597447 | MS.gene70154:CDS |
| GCCAAAGATTGGGTCCTGCA+GGG | 0.618606 | 4.1:-7594390 | MS.gene70154:CDS |
| ATGACAAATTTAAATTCTGG+CGG | 0.623658 | 4.1:-7597418 | MS.gene70154:CDS |
| GCCTAGGCGTGAACTCACCT+CGG | 0.624055 | 4.1:+7597501 | None:intergenic |
| TCAGCATAAGCGTGATGAGG+AGG | 0.627680 | 4.1:-7595563 | MS.gene70154:CDS |
| TCTGTCATAAAGTCTCATGT+TGG | 0.633215 | 4.1:-7592791 | MS.gene70154:CDS |
| GATTTGACAAGTGCAAAGGA+GGG | 0.634502 | 4.1:-7599216 | MS.gene70154:CDS |
| TTCTATGCCTGCAAATACAA+GGG | 0.637331 | 4.1:-7593894 | MS.gene70154:CDS |
| CTTTCTATTTCAGGTCTCCG+AGG | 0.639149 | 4.1:-7597518 | MS.gene70154:intron |
| TCCGAGGTGAGTTCACGCCT+AGG | 0.646167 | 4.1:-7597502 | MS.gene70154:CDS |
| CGATCCAAGTTGTGCCACTG+AGG | 0.655867 | 4.1:+7597019 | None:intergenic |
| CTATGAAGACCGAAGTAATG+CGG | 0.659298 | 4.1:-7592934 | MS.gene70154:CDS |
| TTATCAGCATAAGCGTGATG+AGG | 0.663554 | 4.1:-7595566 | MS.gene70154:CDS |
| AATTGATGCAGAGCGCATCA+CGG | 0.675237 | 4.1:-7593119 | MS.gene70154:intron |
| GCGGTCAAAAGTAAGGCCGG+AGG | 0.707260 | 4.1:-7592833 | MS.gene70154:CDS |
| CATATGGAGCTGTAACAAAG+GGG | 0.707348 | 4.1:-7597387 | MS.gene70154:CDS |
| ATCGGTCAAAGGATCCTCAG+TGG | 0.720581 | 4.1:-7597033 | MS.gene70154:CDS |
| AATTCAAGTGCAGCTCAAAG+CGG | 0.724106 | 4.1:-7595538 | MS.gene70154:intron |
| GAGTTTAGTTCAACATACGG+CGG | 0.743997 | 4.1:-7596805 | MS.gene70154:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 7592469 | 7599358 | 7592469 | ID=MS.gene70154 |
| chr4.1 | mRNA | 7592469 | 7599358 | 7592469 | ID=MS.gene70154.t1;Parent=MS.gene70154 |
| chr4.1 | exon | 7599056 | 7599358 | 7599056 | ID=MS.gene70154.t1.exon1;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7599056 | 7599358 | 7599056 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7597202 | 7597527 | 7597202 | ID=MS.gene70154.t1.exon2;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7597202 | 7597527 | 7597202 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7597007 | 7597099 | 7597007 | ID=MS.gene70154.t1.exon3;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7597007 | 7597099 | 7597007 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7596806 | 7596896 | 7596806 | ID=MS.gene70154.t1.exon4;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7596806 | 7596896 | 7596806 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7595539 | 7595632 | 7595539 | ID=MS.gene70154.t1.exon5;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7595539 | 7595632 | 7595539 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7595086 | 7595183 | 7595086 | ID=MS.gene70154.t1.exon6;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7595086 | 7595183 | 7595086 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7594798 | 7594867 | 7594798 | ID=MS.gene70154.t1.exon7;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7594798 | 7594867 | 7594798 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7594345 | 7594448 | 7594345 | ID=MS.gene70154.t1.exon8;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7594345 | 7594448 | 7594345 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7593814 | 7593930 | 7593814 | ID=MS.gene70154.t1.exon9;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7593814 | 7593930 | 7593814 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7593258 | 7593334 | 7593258 | ID=MS.gene70154.t1.exon10;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7593258 | 7593334 | 7593258 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7593086 | 7593130 | 7593086 | ID=MS.gene70154.t1.exon11;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7593086 | 7593130 | 7593086 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| chr4.1 | exon | 7592469 | 7592976 | 7592469 | ID=MS.gene70154.t1.exon12;Parent=MS.gene70154.t1 |
| chr4.1 | CDS | 7592469 | 7592976 | 7592469 | ID=cds.MS.gene70154.t1;Parent=MS.gene70154.t1 |
| Gene Sequence |
| Protein sequence |
