Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53070.t1 | XP_003613882.1 | 97.1 | 171 | 5 | 0 | 1 | 171 | 1 | 171 | 5.70E-88 | 334 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53070.t1 | Q99LX5 | 41.0 | 173 | 89 | 5 | 1 | 166 | 1 | 167 | 1.6e-22 | 107.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53070.t1 | G7JWG8 | 97.1 | 171 | 5 | 0 | 1 | 171 | 1 | 171 | 4.1e-88 | 334.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene53070 | 0.80044 | 1.44E-48 | -1.69E-46 |
| MS.gene049283 | MS.gene53070 | 0.805712 | 1.17E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene53070 | 0.824722 | 6.92E-54 | -1.69E-46 |
| MS.gene049680 | MS.gene53070 | 0.816757 | 4.69E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene53070 | 0.835567 | 1.56E-56 | -1.69E-46 |
| MS.gene050085 | MS.gene53070 | 0.809468 | 1.86E-50 | -1.69E-46 |
| MS.gene050317 | MS.gene53070 | 0.811005 | 8.69E-51 | -1.69E-46 |
| MS.gene050386 | MS.gene53070 | 0.803584 | 3.25E-49 | -1.69E-46 |
| MS.gene050437 | MS.gene53070 | 0.8095 | 1.84E-50 | -1.69E-46 |
| MS.gene050571 | MS.gene53070 | 0.809654 | 1.70E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene53070 | 0.835592 | 1.53E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene53070 | 0.852149 | 5.58E-61 | -1.69E-46 |
| MS.gene050689 | MS.gene53070 | 0.822418 | 2.39E-53 | -1.69E-46 |
| MS.gene050737 | MS.gene53070 | 0.812438 | 4.24E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene53070 | 0.86561 | 5.21E-65 | -1.69E-46 |
| MS.gene050838 | MS.gene53070 | 0.812682 | 3.75E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene53070 | 0.863738 | 2.01E-64 | -1.69E-46 |
| MS.gene050955 | MS.gene53070 | 0.852296 | 5.07E-61 | -1.69E-46 |
| MS.gene051003 | MS.gene53070 | 0.905542 | 3.85E-80 | -1.69E-46 |
| MS.gene051184 | MS.gene53070 | 0.80836 | 3.22E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene53070 | 0.818375 | 2.03E-52 | -1.69E-46 |
| MS.gene051243 | MS.gene53070 | 0.801822 | 7.51E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene53070 | 0.819022 | 1.44E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene53070 | 0.84633 | 2.32E-59 | -1.69E-46 |
| MS.gene051452 | MS.gene53070 | 0.812855 | 3.44E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene53070 | 0.805857 | 1.09E-49 | -1.69E-46 |
| MS.gene051831 | MS.gene53070 | 0.802947 | 4.40E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene53070 | 0.800111 | 1.68E-48 | -1.69E-46 |
| MS.gene051975 | MS.gene53070 | 0.844065 | 9.52E-59 | -1.69E-46 |
| MS.gene052072 | MS.gene53070 | 0.821595 | 3.71E-53 | -1.69E-46 |
| MS.gene052242 | MS.gene53070 | -0.812767 | 3.59E-51 | -1.69E-46 |
| MS.gene052342 | MS.gene53070 | 0.835382 | 1.73E-56 | -1.69E-46 |
| MS.gene052434 | MS.gene53070 | 0.85057 | 1.56E-60 | -1.69E-46 |
| MS.gene052518 | MS.gene53070 | 0.840015 | 1.12E-57 | -1.69E-46 |
| MS.gene053006 | MS.gene53070 | 0.806017 | 1.01E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene53070 | 0.847858 | 8.86E-60 | -1.69E-46 |
| MS.gene053564 | MS.gene53070 | 0.801671 | 8.07E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene53070 | 0.805707 | 1.17E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene53070 | 0.822975 | 1.78E-53 | -1.69E-46 |
| MS.gene054403 | MS.gene53070 | 0.863524 | 2.34E-64 | -1.69E-46 |
| MS.gene05469 | MS.gene53070 | 0.828774 | 7.46E-55 | -1.69E-46 |
| MS.gene05517 | MS.gene53070 | 0.842903 | 1.95E-58 | -1.69E-46 |
| MS.gene055311 | MS.gene53070 | 0.814714 | 1.34E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene53070 | 0.820526 | 6.55E-53 | -1.69E-46 |
| MS.gene055623 | MS.gene53070 | 0.800368 | 1.49E-48 | -1.69E-46 |
| MS.gene056097 | MS.gene53070 | 0.800811 | 1.21E-48 | -1.69E-46 |
| MS.gene056181 | MS.gene53070 | 0.837409 | 5.29E-57 | -1.69E-46 |
| MS.gene056699 | MS.gene53070 | 0.850654 | 1.48E-60 | -1.69E-46 |
| MS.gene056787 | MS.gene53070 | 0.865071 | 7.70E-65 | -1.69E-46 |
| MS.gene056849 | MS.gene53070 | 0.803209 | 3.89E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene53070 | 0.845151 | 4.86E-59 | -1.69E-46 |
| MS.gene057102 | MS.gene53070 | 0.810832 | 9.47E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene53070 | 0.806734 | 7.12E-50 | -1.69E-46 |
| MS.gene057320 | MS.gene53070 | 0.819006 | 1.46E-52 | -1.69E-46 |
| MS.gene05781 | MS.gene53070 | 0.83698 | 6.81E-57 | -1.69E-46 |
| MS.gene057890 | MS.gene53070 | -0.835908 | 1.28E-56 | -1.69E-46 |
| MS.gene057999 | MS.gene53070 | 0.850131 | 2.07E-60 | -1.69E-46 |
| MS.gene058592 | MS.gene53070 | 0.804725 | 1.88E-49 | -1.69E-46 |
| MS.gene058646 | MS.gene53070 | 0.804506 | 2.09E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene53070 | 0.811633 | 6.35E-51 | -1.69E-46 |
| MS.gene058708 | MS.gene53070 | -0.834564 | 2.79E-56 | -1.69E-46 |
| MS.gene059146 | MS.gene53070 | 0.862203 | 5.99E-64 | -1.69E-46 |
| MS.gene059283 | MS.gene53070 | 0.810251 | 1.26E-50 | -1.69E-46 |
| MS.gene059290 | MS.gene53070 | 0.82786 | 1.24E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene53070 | 0.839133 | 1.90E-57 | -1.69E-46 |
| MS.gene06010 | MS.gene53070 | 0.828804 | 7.33E-55 | -1.69E-46 |
| MS.gene06011 | MS.gene53070 | 0.844103 | 9.30E-59 | -1.69E-46 |
| MS.gene060259 | MS.gene53070 | 0.824507 | 7.77E-54 | -1.69E-46 |
| MS.gene060763 | MS.gene53070 | 0.807863 | 4.11E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene53070 | 0.830362 | 3.06E-55 | -1.69E-46 |
| MS.gene060935 | MS.gene53070 | 0.815566 | 8.66E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene53070 | 0.818571 | 1.83E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene53070 | 0.838944 | 2.13E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53070.t1 | MTR_5g042160 | 97.380 | 229 | 6 | 0 | 1 | 229 | 1 | 229 | 3.36e-160 | 442 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53070.t1 | AT3G52220 | 64.384 | 219 | 70 | 5 | 1 | 213 | 1 | 217 | 9.84e-91 | 267 |
Find 57 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCTCCATTTCTTCATTT+TGG | 0.047448 | 5.4:+31040185 | None:intergenic |
| GATTCATCTTCAATCTTTCT+TGG | 0.204880 | 5.4:+31037814 | None:intergenic |
| ATCTTTCTTGGTGATTGATT+AGG | 0.343246 | 5.4:+31037826 | None:intergenic |
| AAAAGAGAAGACGGGAAGAA+AGG | 0.371187 | 5.4:-31037774 | MS.gene53070:CDS |
| CTCTTGCTTTCTTTCCTCAC+GGG | 0.394011 | 5.4:+31037723 | None:intergenic |
| AAAGTCCCAAAATGAAGAAA+TGG | 0.405533 | 5.4:-31040191 | MS.gene53070:CDS |
| TCAAGGCTCCTGTTGGTAGA+TGG | 0.426647 | 5.4:-31041679 | MS.gene53070:CDS |
| AAACACAGAGAGAATTATAT+AGG | 0.430798 | 5.4:-31041710 | MS.gene53070:CDS |
| GAGAAGACGGGAAGAAAGGA+AGG | 0.440522 | 5.4:-31037770 | MS.gene53070:CDS |
| CCTTTCTGCCATCTACCAAC+AGG | 0.451053 | 5.4:+31041671 | None:intergenic |
| TCTCTTGCTTTCTTTCCTCA+CGG | 0.454567 | 5.4:+31037722 | None:intergenic |
| GCTGAAGCAGCAAGGGTTCA+AGG | 0.474043 | 5.4:-31039992 | MS.gene53070:CDS |
| TGTGCAGAGAACTCCGCCCT+TGG | 0.476704 | 5.4:-31037909 | MS.gene53070:intron |
| GCAGCAAGGGTTCAAGGTGT+TGG | 0.487662 | 5.4:-31039986 | MS.gene53070:CDS |
| GGGTCTACAGCAGAAGACTT+AGG | 0.489361 | 5.4:-31040025 | MS.gene53070:CDS |
| GTGCAGAGAACTCCGCCCTT+GGG | 0.491260 | 5.4:-31037908 | MS.gene53070:intron |
| TGGTGTATGCAAGACCTTTG+AGG | 0.493293 | 5.4:+31037873 | None:intergenic |
| AATTAAGGAAGAGGAGGAGC+AGG | 0.497912 | 5.4:-31040143 | MS.gene53070:CDS |
| AGAGGAGGAGCAGGCAATGA+GGG | 0.501735 | 5.4:-31040134 | MS.gene53070:CDS |
| AAAATTCATGTTTATCAAGA+CGG | 0.507020 | 5.4:+31040065 | None:intergenic |
| AGCAAGAGAAGCGTGAGAAA+CGG | 0.508367 | 5.4:-31037708 | MS.gene53070:CDS |
| TGAGGACGACTAGCACGCTT+AGG | 0.512346 | 5.4:+31040094 | None:intergenic |
| CCAACTCGAGGTGGCGTCCG+TGG | 0.525837 | 5.4:-31042067 | MS.gene53070:CDS |
| TGCAAGACCTTTGAGGAACC+AGG | 0.527049 | 5.4:+31037880 | None:intergenic |
| AGAAAGATAAAGAGAGGAGG+AGG | 0.528808 | 5.4:-31037651 | MS.gene53070:CDS |
| TTAATGGAACAGAGTTCACT+TGG | 0.542444 | 5.4:-31041751 | MS.gene53070:intron |
| CTCCGCCCTTGGGAAGAACC+TGG | 0.543845 | 5.4:-31037898 | MS.gene53070:CDS |
| GAGGAACCAGGTTCTTCCCA+AGG | 0.547002 | 5.4:+31037892 | None:intergenic |
| AAAGATTGAAGATGAATCTG+AGG | 0.564195 | 5.4:-31037809 | MS.gene53070:CDS |
| AATGAGGGAAGCTCTCGGCT+TGG | 0.564929 | 5.4:-31040119 | MS.gene53070:CDS |
| GACACAAGAAAGATAAAGAG+AGG | 0.577049 | 5.4:-31037657 | MS.gene53070:CDS |
| AAGAGGAGGAGCAGGCAATG+AGG | 0.579166 | 5.4:-31040135 | MS.gene53070:CDS |
| CCACGGACGCCACCTCGAGT+TGG | 0.580213 | 5.4:+31042067 | None:intergenic |
| ATTCTCGTGATTCAGATGAC+AGG | 0.582090 | 5.4:-31037684 | MS.gene53070:CDS |
| TTTCAGAACTAGTAAAGAGA+GGG | 0.582339 | 5.4:-31040045 | MS.gene53070:CDS |
| GGAAGAACCTGGTTCCTCAA+AGG | 0.584885 | 5.4:-31037887 | MS.gene53070:CDS |
| AGGAACCAGGTTCTTCCCAA+GGG | 0.588462 | 5.4:+31037893 | None:intergenic |
| CCTGTTGGTAGATGGCAGAA+AGG | 0.593241 | 5.4:-31041671 | MS.gene53070:intron |
| GTCCCAAAATGAAGAAATGG+AGG | 0.596320 | 5.4:-31040188 | MS.gene53070:CDS |
| AAGGTCACGCTGAAGCAGCA+AGG | 0.608440 | 5.4:-31040000 | MS.gene53070:CDS |
| CATAGTCTCAAGGCTCCTGT+TGG | 0.611584 | 5.4:-31041686 | MS.gene53070:CDS |
| TTATATAGGTCATAGTCTCA+AGG | 0.617267 | 5.4:-31041696 | MS.gene53070:CDS |
| ACTCGAGGTGGCGTCCGTGG+CGG | 0.620619 | 5.4:-31042064 | MS.gene53070:CDS |
| AGGTCACGCTGAAGCAGCAA+GGG | 0.623464 | 5.4:-31039999 | MS.gene53070:CDS |
| ACTTACGATCTCGACCGCCA+CGG | 0.627738 | 5.4:+31042050 | None:intergenic |
| AAGCGTGCTAGTCGTCCTCA+AGG | 0.629339 | 5.4:-31040091 | MS.gene53070:CDS |
| CAGGCAATGAGGGAAGCTCT+CGG | 0.634387 | 5.4:-31040124 | MS.gene53070:CDS |
| AACCAGGTTCTTCCCAAGGG+CGG | 0.636510 | 5.4:+31037896 | None:intergenic |
| TTATCAAGACGGTTACCTTG+AGG | 0.642277 | 5.4:+31040076 | None:intergenic |
| GGTCTTGCATACACCAGCTG+AGG | 0.643578 | 5.4:-31037866 | MS.gene53070:CDS |
| TAATGGAACAGAGTTCACTT+GGG | 0.649042 | 5.4:-31041750 | MS.gene53070:intron |
| ACAGCAGAAGACTTAGGTGA+AGG | 0.653024 | 5.4:-31040019 | MS.gene53070:CDS |
| AGGAAGAGAAACGTGAAAAG+CGG | 0.661820 | 5.4:-31037750 | MS.gene53070:CDS |
| ACAAGAAAGATAAAGAGAGG+AGG | 0.663634 | 5.4:-31037654 | MS.gene53070:CDS |
| ATGTATCATCCAACTCGAGG+TGG | 0.688754 | 5.4:-31042076 | MS.gene53070:CDS |
| TGAAAAGCGGCATTCCCGTG+AGG | 0.706921 | 5.4:-31037737 | MS.gene53070:CDS |
| AACATGTATCATCCAACTCG+AGG | 0.712342 | 5.4:-31042079 | MS.gene53070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTCCTTATTTAATT+AGG | - | chr5.4:31040268-31040287 | MS.gene53070:intron | 10.0% |
| !!! | TAAGAAAATTTAATTTTAAG+AGG | + | chr5.4:31040225-31040244 | None:intergenic | 10.0% |
| !! | AAAAATAAAACAAATGAAAC+AGG | + | chr5.4:31039837-31039856 | None:intergenic | 15.0% |
| !! | AATTAAACAAAATAGGAATT+AGG | + | chr5.4:31037779-31037798 | None:intergenic | 15.0% |
| !! | AATTTGAAAAAGAGAAAAAT+TGG | + | chr5.4:31037715-31037734 | None:intergenic | 15.0% |
| !! | AGGATATCATATAAATTATT+TGG | - | chr5.4:31039857-31039876 | MS.gene53070:intron | 15.0% |
| !! | ATAAAAAGACAATTTAAAGA+TGG | + | chr5.4:31039463-31039482 | None:intergenic | 15.0% |
| !! | CAATTATTTAATATAGAAGT+TGG | - | chr5.4:31041510-31041529 | MS.gene53070:intron | 15.0% |
| !! | CATTAAATAACTAATGTATT+TGG | + | chr5.4:31038607-31038626 | None:intergenic | 15.0% |
| !! | TGAATTAAAAGGTTTAAATT+TGG | + | chr5.4:31039015-31039034 | None:intergenic | 15.0% |
| !!! | AAAACTGTTATTTCTATTAA+AGG | + | chr5.4:31041105-31041124 | None:intergenic | 15.0% |
| !!! | ATAAATCTTTTAAAAGAATC+AGG | + | chr5.4:31040544-31040563 | None:intergenic | 15.0% |
| !!! | GTTTCATTTGTTTTATTTTT+AGG | - | chr5.4:31039837-31039856 | MS.gene53070:intron | 15.0% |
| !!! | GTTTTGTATTGATATAAATA+AGG | - | chr5.4:31040298-31040317 | MS.gene53070:intron | 15.0% |
| !!! | TTATATTTAGATTTTTCTCA+TGG | - | chr5.4:31040513-31040532 | MS.gene53070:intron | 15.0% |
| !!! | TTATATTTAGGTTTTTTTCA+TGG | - | chr5.4:31039951-31039970 | MS.gene53070:intron | 15.0% |
| !!! | TTTTTCAGAAACAAAATTTT+AGG | - | chr5.4:31040956-31040975 | MS.gene53070:intron | 15.0% |
| !! | AAAATTCATGTTTATCAAGA+CGG | + | chr5.4:31039650-31039669 | None:intergenic | 20.0% |
| !! | AATAAGTTACAATAATAGCA+CGG | + | chr5.4:31041774-31041793 | None:intergenic | 20.0% |
| !! | AATTGAAATTGAAATTGAGA+TGG | + | chr5.4:31037692-31037711 | None:intergenic | 20.0% |
| !! | AGAAGAGATAAAAAGAATTA+AGG | - | chr5.4:31039554-31039573 | MS.gene53070:intron | 20.0% |
| !! | AGTAAATTGGTTGTTTAAAT+AGG | - | chr5.4:31038912-31038931 | MS.gene53070:intron | 20.0% |
| !! | CAAATCATAAATAAACAAAG+TGG | + | chr5.4:31040905-31040924 | None:intergenic | 20.0% |
| !! | CTCTAAATCCTAATTAAATA+AGG | + | chr5.4:31040279-31040298 | None:intergenic | 20.0% |
| !! | GATATTAGATTTCAATTTGA+TGG | - | chr5.4:31038934-31038953 | MS.gene53070:intron | 20.0% |
| !! | GTGGTAAAATTAAACAAAAT+AGG | + | chr5.4:31037786-31037805 | None:intergenic | 20.0% |
| !! | TAAAATTTAAGAAGCTAGAA+AGG | - | chr5.4:31039300-31039319 | MS.gene53070:intron | 20.0% |
| !! | TAAATAGCATAAGGAAATTT+CGG | + | chr5.4:31038757-31038776 | None:intergenic | 20.0% |
| !! | TATCTAAACTTACATTACAT+TGG | + | chr5.4:31039262-31039281 | None:intergenic | 20.0% |
| !! | TCTTCAAATTAAGGTTAATT+GGG | + | chr5.4:31038430-31038449 | None:intergenic | 20.0% |
| !! | TTCGCCATATAATAAATAAA+GGG | + | chr5.4:31041152-31041171 | None:intergenic | 20.0% |
| !! | TTGAAAAAAAAAGCTGATTA+GGG | + | chr5.4:31040994-31041013 | None:intergenic | 20.0% |
| !! | TTTCGCCATATAATAAATAA+AGG | + | chr5.4:31041153-31041172 | None:intergenic | 20.0% |
| !!! | AAAACAACTTTTTAGATTCA+TGG | - | chr5.4:31038550-31038569 | MS.gene53070:intron | 20.0% |
| !!! | AAATTGTCTTTTTATTCAAC+AGG | - | chr5.4:31039468-31039487 | MS.gene53070:intron | 20.0% |
| !!! | AATAAAGCTCTAAAAATCAT+TGG | + | chr5.4:31039990-31040009 | None:intergenic | 20.0% |
| !!! | AATTGTCTTTTTATTCAACA+GGG | - | chr5.4:31039469-31039488 | MS.gene53070:intron | 20.0% |
| !!! | CACTTTGTTTATTTATGATT+TGG | - | chr5.4:31040903-31040922 | MS.gene53070:intron | 20.0% |
| !!! | GAGTTCTAAAATTGTAAATA+TGG | + | chr5.4:31040376-31040395 | None:intergenic | 20.0% |
| !!! | TATTGTTTATAGTCTTGTAT+AGG | - | chr5.4:31038807-31038826 | MS.gene53070:intron | 20.0% |
| !!! | TGTAAGAATGAATAATTTTG+TGG | + | chr5.4:31037822-31037841 | None:intergenic | 20.0% |
| !!! | TTCTTATTTCTTTGTTATGA+TGG | - | chr5.4:31040239-31040258 | MS.gene53070:intron | 20.0% |
| ! | AAAATCTTGAATAAGCTGTT+AGG | + | chr5.4:31040070-31040089 | None:intergenic | 25.0% |
| ! | AAACACAGAGAGAATTATAT+AGG | - | chr5.4:31038002-31038021 | MS.gene53070:intron | 25.0% |
| ! | AAAGTAGAAAAAAGAGAAGA+CGG | - | chr5.4:31041929-31041948 | MS.gene53070:intron | 25.0% |
| ! | AATTGTAATCATGCAATTCT+TGG | + | chr5.4:31040108-31040127 | None:intergenic | 25.0% |
| ! | AGAGTAGATATCCAAAAAAT+GGG | + | chr5.4:31040788-31040807 | None:intergenic | 25.0% |
| ! | AGATATGCAATTTAGTACAA+AGG | - | chr5.4:31038171-31038190 | MS.gene53070:intron | 25.0% |
| ! | AGTAAAAGCTTAGAAATTAC+AGG | + | chr5.4:31040869-31040888 | None:intergenic | 25.0% |
| ! | ATAAACATTAGACTGTTGTT+TGG | - | chr5.4:31039415-31039434 | MS.gene53070:intron | 25.0% |
| ! | ATATAACTTTCCTATACCTA+AGG | + | chr5.4:31041390-31041409 | None:intergenic | 25.0% |
| ! | ATTCAATCAAAACTGTTGAT+CGG | - | chr5.4:31038876-31038895 | MS.gene53070:intron | 25.0% |
| ! | CATGGAATAATTAATGTATC+TGG | - | chr5.4:31038568-31038587 | MS.gene53070:intron | 25.0% |
| ! | CTTCAAATTAAGGTTAATTG+GGG | + | chr5.4:31038429-31038448 | None:intergenic | 25.0% |
| ! | CTTGAAAAAAAAAGCTGATT+AGG | + | chr5.4:31040995-31041014 | None:intergenic | 25.0% |
| ! | GAAGAAAAGTAAATAGCATA+AGG | + | chr5.4:31038766-31038785 | None:intergenic | 25.0% |
| ! | GAGTCTGATGTATTATATTT+AGG | - | chr5.4:31039939-31039958 | MS.gene53070:intron | 25.0% |
| ! | GATAAAAAGAATTAAGGAAG+AGG | - | chr5.4:31039560-31039579 | MS.gene53070:intron | 25.0% |
| ! | GATATGCAATTTAGTACAAA+GGG | - | chr5.4:31038172-31038191 | MS.gene53070:intron | 25.0% |
| ! | GTAAGGTAAGGTAAAATAAA+AGG | + | chr5.4:31038078-31038097 | None:intergenic | 25.0% |
| ! | GTCTTCAAATTAAGGTTAAT+TGG | + | chr5.4:31038431-31038450 | None:intergenic | 25.0% |
| ! | TAAACTTACATTACATTGGA+TGG | + | chr5.4:31039258-31039277 | None:intergenic | 25.0% |
| ! | TAACATATGAATGCTTAGTT+TGG | - | chr5.4:31041486-31041505 | MS.gene53070:intron | 25.0% |
| ! | TAGAGTAGATATCCAAAAAA+TGG | + | chr5.4:31040789-31040808 | None:intergenic | 25.0% |
| !! | ATAGCTGTTTGTTAAAATTC+TGG | + | chr5.4:31038144-31038163 | None:intergenic | 25.0% |
| !! | GAAATAACAGTTTTTGTAGA+AGG | - | chr5.4:31041111-31041130 | MS.gene53070:intron | 25.0% |
| !! | GAATAATTTTGTGGAAATCA+GGG | + | chr5.4:31037813-31037832 | None:intergenic | 25.0% |
| !! | TGAATAATTTTGTGGAAATC+AGG | + | chr5.4:31037814-31037833 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | + | chr5.4:31038533-31038552 | None:intergenic | 25.0% |
| !!! | AGCAAATTCTTTTAGCTTAT+AGG | - | chr5.4:31040014-31040033 | MS.gene53070:CDS | 25.0% |
| !!! | CTATTTACTTTTCTTCAACA+TGG | - | chr5.4:31038770-31038789 | MS.gene53070:intron | 25.0% |
| !!! | CTTTTAATTCAAAGCTCATA+GGG | - | chr5.4:31039024-31039043 | MS.gene53070:intron | 25.0% |
| !!! | TATTTATGATTTGGTAGAAC+AGG | - | chr5.4:31040912-31040931 | MS.gene53070:intron | 25.0% |
| !!! | TCATTTTGGTTTTATGGTTT+AGG | - | chr5.4:31039130-31039149 | MS.gene53070:intron | 25.0% |
| !!! | TGTTAGGTCTTTTATTTACT+GGG | + | chr5.4:31040054-31040073 | None:intergenic | 25.0% |
| !!! | TTTTAATTCAAAGCTCATAG+GGG | - | chr5.4:31039025-31039044 | MS.gene53070:intron | 25.0% |
| !!! | TTTTCGTCATTTTGGTTTTA+TGG | - | chr5.4:31039124-31039143 | MS.gene53070:intron | 25.0% |
| AAAAAGAATTAAGGAAGAGG+AGG | - | chr5.4:31039563-31039582 | MS.gene53070:intron | 30.0% | |
| AAACACACTGTTGAAGTTTA+GGG | + | chr5.4:31040432-31040451 | None:intergenic | 30.0% | |
| AAAGATTGAAGATGAATCTG+AGG | - | chr5.4:31041903-31041922 | MS.gene53070:intron | 30.0% | |
| AAAGTCCCAAAATGAAGAAA+TGG | - | chr5.4:31039521-31039540 | MS.gene53070:intron | 30.0% | |
| AAGTAGAAAAAAGAGAAGAC+GGG | - | chr5.4:31041930-31041949 | MS.gene53070:intron | 30.0% | |
| ACATCTATTATTTGGAAGAC+TGG | - | chr5.4:31041188-31041207 | MS.gene53070:intron | 30.0% | |
| ACTTATTTGTGCATCTTTGA+AGG | + | chr5.4:31040159-31040178 | None:intergenic | 30.0% | |
| AGTCTTCCAAATAATAGATG+TGG | + | chr5.4:31041189-31041208 | None:intergenic | 30.0% | |
| CCAAACATATACAATGCAAA+AGG | + | chr5.4:31038691-31038710 | None:intergenic | 30.0% | |
| CGCTATTTGACATGAATTAA+AGG | + | chr5.4:31038102-31038121 | None:intergenic | 30.0% | |
| GATTCATCTTCAATCTTTCT+TGG | + | chr5.4:31041901-31041920 | None:intergenic | 30.0% | |
| GGCTATTCACATCTAAATAA+GGG | - | chr5.4:31039436-31039455 | MS.gene53070:intron | 30.0% | |
| GGTATAAAGATGGAAAAGAA+AGG | + | chr5.4:31041268-31041287 | None:intergenic | 30.0% | |
| TAGACCAGCTTAACAAATAA+GGG | + | chr5.4:31041430-31041449 | None:intergenic | 30.0% | |
| TAGTCACATCATATAGTCTT+CGG | + | chr5.4:31038277-31038296 | None:intergenic | 30.0% | |
| TCAGTCTTTGCTTAGTAAAT+TGG | - | chr5.4:31038899-31038918 | MS.gene53070:intron | 30.0% | |
| TGAATTAAAGGAGTAAGGTA+AGG | + | chr5.4:31038090-31038109 | None:intergenic | 30.0% | |
| TGACATGAATTAAAGGAGTA+AGG | + | chr5.4:31038095-31038114 | None:intergenic | 30.0% | |
| TGGCTATTCACATCTAAATA+AGG | - | chr5.4:31039435-31039454 | MS.gene53070:intron | 30.0% | |
| TTAGACCAGCTTAACAAATA+AGG | + | chr5.4:31041431-31041450 | None:intergenic | 30.0% | |
| TTATATAGGTCATAGTCTCA+AGG | - | chr5.4:31038016-31038035 | MS.gene53070:intron | 30.0% | |
| TTTCAGAACTAGTAAAGAGA+GGG | - | chr5.4:31039667-31039686 | MS.gene53070:intron | 30.0% | |
| TTTGTTAGCAATATCGTTTG+CGG | - | chr5.4:31038368-31038387 | MS.gene53070:intron | 30.0% | |
| ! | AAGATCTGAAGTTTCTTCTA+CGG | - | chr5.4:31038964-31038983 | MS.gene53070:intron | 30.0% |
| ! | ACATTAGCTTGGTATAAAGA+TGG | + | chr5.4:31041278-31041297 | None:intergenic | 30.0% |
| ! | AGTTTGTGTCATTCTAACTT+TGG | - | chr5.4:31041553-31041572 | MS.gene53070:intron | 30.0% |
| ! | ATATCCCTTATTTGTTAAGC+TGG | - | chr5.4:31041423-31041442 | MS.gene53070:intron | 30.0% |
| ! | ATCTTTCTTGGTGATTGATT+AGG | + | chr5.4:31041889-31041908 | None:intergenic | 30.0% |
| ! | CCTTTTGCATTGTATATGTT+TGG | - | chr5.4:31038688-31038707 | MS.gene53070:intron | 30.0% |
| ! | CTGGCCCTTTATTTATTATA+TGG | - | chr5.4:31041145-31041164 | MS.gene53070:intron | 30.0% |
| ! | GATCTAAGGTCTTCAAATTA+AGG | + | chr5.4:31038439-31038458 | None:intergenic | 30.0% |
| ! | TAGTTTAACTTCGTAAGCAA+AGG | + | chr5.4:31041717-31041736 | None:intergenic | 30.0% |
| ! | TTTTCAGAACTAGTAAAGAG+AGG | - | chr5.4:31039666-31039685 | MS.gene53070:intron | 30.0% |
| !! | AGACTTGTTGTATTGACAAT+AGG | - | chr5.4:31038216-31038235 | MS.gene53070:intron | 30.0% |
| !! | CCTATGAGCTTTGAATTAAA+AGG | + | chr5.4:31039026-31039045 | None:intergenic | 30.0% |
| !! | CCTTTTAATTCAAAGCTCAT+AGG | - | chr5.4:31039023-31039042 | MS.gene53070:intron | 30.0% |
| !! | CTGTTAGGTCTTTTATTTAC+TGG | + | chr5.4:31040055-31040074 | None:intergenic | 30.0% |
| !! | TTAAATTTGGCTCTAGACTT+GGG | + | chr5.4:31039002-31039021 | None:intergenic | 30.0% |
| !! | TTTAAATTTGGCTCTAGACT+TGG | + | chr5.4:31039003-31039022 | None:intergenic | 30.0% |
| !!! | CAGCTTTATTTTCGTCATTT+TGG | - | chr5.4:31039116-31039135 | MS.gene53070:intron | 30.0% |
| !!! | GCAGTTGCATTTTGAAATAA+TGG | - | chr5.4:31041575-31041594 | MS.gene53070:intron | 30.0% |
| !!! | TGGTTTTATGGTTTAGGTTA+TGG | - | chr5.4:31039136-31039155 | MS.gene53070:intron | 30.0% |
| AACACCGAAACTACTTAACA+TGG | - | chr5.4:31041449-31041468 | MS.gene53070:intron | 35.0% | |
| AACATTGTGAAATCACCCTA+GGG | - | chr5.4:31041364-31041383 | MS.gene53070:intron | 35.0% | |
| AATGACACAAACTTGAAGAG+TGG | + | chr5.4:31041546-31041565 | None:intergenic | 35.0% | |
| ACAAGAAAGATAAAGAGAGG+AGG | - | chr5.4:31042058-31042077 | MS.gene53070:CDS | 35.0% | |
| ACACCGAAACTACTTAACAT+GGG | - | chr5.4:31041450-31041469 | MS.gene53070:intron | 35.0% | |
| ACGATACAGACATAAAACAG+AGG | - | chr5.4:31038334-31038353 | MS.gene53070:intron | 35.0% | |
| ACTATATGATGTGACTAGGT+AGG | - | chr5.4:31038280-31038299 | MS.gene53070:intron | 35.0% | |
| AGAAAACAGTCTAGTAAGTG+GGG | - | chr5.4:31040658-31040677 | MS.gene53070:intron | 35.0% | |
| ATGACACAAACTTGAAGAGT+GGG | + | chr5.4:31041545-31041564 | None:intergenic | 35.0% | |
| CAAACACACTGTTGAAGTTT+AGG | + | chr5.4:31040433-31040452 | None:intergenic | 35.0% | |
| CAACCCATGTTAAGTAGTTT+CGG | + | chr5.4:31041456-31041475 | None:intergenic | 35.0% | |
| CAATAATAGCACGGAATTTC+TGG | + | chr5.4:31041765-31041784 | None:intergenic | 35.0% | |
| CACTAACATAGACATTAGCT+TGG | + | chr5.4:31041289-31041308 | None:intergenic | 35.0% | |
| CAGAAAACAGTCTAGTAAGT+GGG | - | chr5.4:31040657-31040676 | MS.gene53070:intron | 35.0% | |
| GAAGACTATATGATGTGACT+AGG | - | chr5.4:31038276-31038295 | MS.gene53070:intron | 35.0% | |
| GAATGAGATGGAATTGAAGA+AGG | + | chr5.4:31037747-31037766 | None:intergenic | 35.0% | |
| GACACAAGAAAGATAAAGAG+AGG | - | chr5.4:31042055-31042074 | MS.gene53070:intron | 35.0% | |
| GCTTCAACAAATCTGAACTT+TGG | + | chr5.4:31040626-31040645 | None:intergenic | 35.0% | |
| GTTGTGTTTCTCACTCTTAA+TGG | - | chr5.4:31037945-31037964 | MS.gene53070:intron | 35.0% | |
| TAACATTGTGAAATCACCCT+AGG | - | chr5.4:31041363-31041382 | MS.gene53070:intron | 35.0% | |
| TAATGGAACAGAGTTCACTT+GGG | - | chr5.4:31037962-31037981 | MS.gene53070:intron | 35.0% | |
| TATTTGGATGAAGAACAGCT+GGG | - | chr5.4:31039873-31039892 | MS.gene53070:intron | 35.0% | |
| TCCAAATAATAGATGTGGAG+TGG | + | chr5.4:31041184-31041203 | None:intergenic | 35.0% | |
| TCCACTCCACATCTATTATT+TGG | - | chr5.4:31041180-31041199 | MS.gene53070:intron | 35.0% | |
| TCTCCTAGGTTGCTTATAAA+GGG | - | chr5.4:31039375-31039394 | MS.gene53070:intron | 35.0% | |
| TGCTTATAAATGTGACCAGA+GGG | - | chr5.4:31038645-31038664 | MS.gene53070:intron | 35.0% | |
| TGGAAAACAAACAGAAGAGA+TGG | + | chr5.4:31041745-31041764 | None:intergenic | 35.0% | |
| TTAAGGAGAAACTTAGGTGA+TGG | + | chr5.4:31039060-31039079 | None:intergenic | 35.0% | |
| TTAATGGAACAGAGTTCACT+TGG | - | chr5.4:31037961-31037980 | MS.gene53070:intron | 35.0% | |
| TTACTAGTGGTTTCAATGGA+GGG | - | chr5.4:31041309-31041328 | MS.gene53070:intron | 35.0% | |
| TTATTTGGATGAAGAACAGC+TGG | - | chr5.4:31039872-31039891 | MS.gene53070:intron | 35.0% | |
| TTCTCCTAGGTTGCTTATAA+AGG | - | chr5.4:31039374-31039393 | MS.gene53070:intron | 35.0% | |
| TTGAATCACACACATAGAAC+AGG | + | chr5.4:31038862-31038881 | None:intergenic | 35.0% | |
| TTGCTTATAAATGTGACCAG+AGG | - | chr5.4:31038644-31038663 | MS.gene53070:intron | 35.0% | |
| TTTATAAGCAACCTAGGAGA+AGG | + | chr5.4:31039375-31039394 | None:intergenic | 35.0% | |
| ! | AAGATACCCATTTTCAGTCA+AGG | - | chr5.4:31040699-31040718 | MS.gene53070:intron | 35.0% |
| ! | AGATACCCATTTTCAGTCAA+GGG | - | chr5.4:31040700-31040719 | MS.gene53070:intron | 35.0% |
| ! | AGCCTCCATTTCTTCATTTT+GGG | + | chr5.4:31039529-31039548 | None:intergenic | 35.0% |
| ! | AGGAGAAAGTATGAATGAGA+TGG | + | chr5.4:31037759-31037778 | None:intergenic | 35.0% |
| ! | AGTGTTACTAGTGGTTTCAA+TGG | - | chr5.4:31041305-31041324 | MS.gene53070:intron | 35.0% |
| ! | GTCTATGTTAGTGTTACTAG+TGG | - | chr5.4:31041296-31041315 | MS.gene53070:intron | 35.0% |
| ! | TTTGTGCATCTTTGAAGGAA+AGG | + | chr5.4:31040154-31040173 | None:intergenic | 35.0% |
| !! | AGATTTGTTGAAGCATGAGA+TGG | - | chr5.4:31040632-31040651 | MS.gene53070:intron | 35.0% |
| !! | CTTTTATTTACTGGGCTGTT+GGG | + | chr5.4:31040046-31040065 | None:intergenic | 35.0% |
| !! | TCTTTTATTTACTGGGCTGT+TGG | + | chr5.4:31040047-31040066 | None:intergenic | 35.0% |
| !!! | AAGACCTTTTTTGGTATACC+CGG | - | chr5.4:31039493-31039512 | MS.gene53070:intron | 35.0% |
| !!! | ATTTTGGGACTTTTTATCCC+GGG | + | chr5.4:31039514-31039533 | None:intergenic | 35.0% |
| !!! | CATTTTGGGACTTTTTATCC+CGG | + | chr5.4:31039515-31039534 | None:intergenic | 35.0% |
| AAAAGAGAAGACGGGAAGAA+AGG | - | chr5.4:31041938-31041957 | MS.gene53070:intron | 40.0% | |
| ACATAAAACAGAGGCTCTTG+GGG | - | chr5.4:31038343-31038362 | MS.gene53070:intron | 40.0% | |
| ACTGCATATGCTATGTTGGT+TGG | - | chr5.4:31039198-31039217 | MS.gene53070:intron | 40.0% | |
| AGAAAGATAAAGAGAGGAGG+AGG | - | chr5.4:31042061-31042080 | MS.gene53070:CDS | 40.0% | |
| AGAAGCTAGAAAGGTTGAAG+AGG | - | chr5.4:31039309-31039328 | MS.gene53070:intron | 40.0% | |
| AGACATAAAACAGAGGCTCT+TGG | - | chr5.4:31038341-31038360 | MS.gene53070:intron | 40.0% | |
| AGGAAGAGAAACGTGAAAAG+CGG | - | chr5.4:31041962-31041981 | MS.gene53070:intron | 40.0% | |
| AGGTTGCTTATAAAGGGTAG+AGG | - | chr5.4:31039381-31039400 | MS.gene53070:intron | 40.0% | |
| ATGTGACTAGGTAGGACATT+AGG | - | chr5.4:31038288-31038307 | MS.gene53070:intron | 40.0% | |
| ATTCTCGTGATTCAGATGAC+AGG | - | chr5.4:31042028-31042047 | MS.gene53070:intron | 40.0% | |
| CCAAAAAATGGGTCTGAACA+TGG | + | chr5.4:31040777-31040796 | None:intergenic | 40.0% | |
| CCAGAAAACAGTCTAGTAAG+TGG | - | chr5.4:31040656-31040675 | MS.gene53070:intron | 40.0% | |
| CTACCCTTTATAAGCAACCT+AGG | + | chr5.4:31039381-31039400 | None:intergenic | 40.0% | |
| CTTAGATCACACTCTTCAAG+TGG | - | chr5.4:31038451-31038470 | MS.gene53070:intron | 40.0% | |
| GAAGCTAGAAAGGTTGAAGA+GGG | - | chr5.4:31039310-31039329 | MS.gene53070:intron | 40.0% | |
| GACATAAAACAGAGGCTCTT+GGG | - | chr5.4:31038342-31038361 | MS.gene53070:intron | 40.0% | |
| GGTTGCTTATAAAGGGTAGA+GGG | - | chr5.4:31039382-31039401 | MS.gene53070:intron | 40.0% | |
| GTCCCAAAATGAAGAAATGG+AGG | - | chr5.4:31039524-31039543 | MS.gene53070:intron | 40.0% | |
| GTTAAAATTCTGGTGCACGA+TGG | + | chr5.4:31038134-31038153 | None:intergenic | 40.0% | |
| GTTACTAGTGGTTTCAATGG+AGG | - | chr5.4:31041308-31041327 | MS.gene53070:intron | 40.0% | |
| GTTTGCTTCTGGTCACATTT+AGG | - | chr5.4:31040448-31040467 | MS.gene53070:intron | 40.0% | |
| TACAAATGTAGCCTGAGGAT+AGG | + | chr5.4:31039096-31039115 | None:intergenic | 40.0% | |
| TACTAGTGGTTTCAATGGAG+GGG | - | chr5.4:31041310-31041329 | MS.gene53070:intron | 40.0% | |
| TAGGATAAAGTGCAGGCTTA+AGG | + | chr5.4:31039077-31039096 | None:intergenic | 40.0% | |
| TATCCCGGGTATACCAAAAA+AGG | + | chr5.4:31039500-31039519 | None:intergenic | 40.0% | |
| TCTCTTGCTTTCTTTCCTCA+CGG | + | chr5.4:31041993-31042012 | None:intergenic | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | + | chr5.4:31038529-31038548 | None:intergenic | 40.0% | |
| TGGTACCCTTGACTGAAAAT+GGG | + | chr5.4:31040708-31040727 | None:intergenic | 40.0% | |
| TGTGACTAGGTAGGACATTA+GGG | - | chr5.4:31038289-31038308 | MS.gene53070:intron | 40.0% | |
| TTATCAAGACGGTTACCTTG+AGG | + | chr5.4:31039639-31039658 | None:intergenic | 40.0% | |
| TTCAACAGTGTGTTTGCTTC+TGG | - | chr5.4:31040437-31040456 | MS.gene53070:intron | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | + | chr5.4:31038530-31038549 | None:intergenic | 40.0% | |
| ! | AAGCACTGCATATGCTATGT+TGG | - | chr5.4:31039194-31039213 | MS.gene53070:intron | 40.0% |
| ! | CACTTGAAGAGTGTGATCTA+AGG | + | chr5.4:31038453-31038472 | None:intergenic | 40.0% |
| ! | CAGCCTCCATTTCTTCATTT+TGG | + | chr5.4:31039530-31039549 | None:intergenic | 40.0% |
| ! | CCACTTACTAGACTGTTTTC+TGG | + | chr5.4:31040659-31040678 | None:intergenic | 40.0% |
| ! | GATACATTTTCTACCTCAGC+TGG | + | chr5.4:31041862-31041881 | None:intergenic | 40.0% |
| ! | GTTTAGGGTGTTAGATAGAG+AGG | + | chr5.4:31040417-31040436 | None:intergenic | 40.0% |
| !! | CTACTTAACATGGGTTGATG+TGG | - | chr5.4:31041459-31041478 | MS.gene53070:intron | 40.0% |
| !!! | AGACCTTTTTTGGTATACCC+GGG | - | chr5.4:31039494-31039513 | MS.gene53070:intron | 40.0% |
| !!! | CAACAGGGAAAGACCTTTTT+TGG | - | chr5.4:31039484-31039503 | MS.gene53070:intron | 40.0% |
| !!! | CCATGTTCAGACCCATTTTT+TGG | - | chr5.4:31040774-31040793 | MS.gene53070:intron | 40.0% |
| !!! | TTCAAGGTGTTGGTTTTGCA+AGG | - | chr5.4:31039736-31039755 | MS.gene53070:intron | 40.0% |
| AATTAAGGAAGAGGAGGAGC+AGG | - | chr5.4:31039569-31039588 | MS.gene53070:intron | 45.0% | |
| ACAGCAGAAGACTTAGGTGA+AGG | - | chr5.4:31039693-31039712 | MS.gene53070:intron | 45.0% | |
| AGCTGTACAAATGTAGCCTG+AGG | + | chr5.4:31039101-31039120 | None:intergenic | 45.0% | |
| AGCTTGCATAATACTCCCTC+TGG | + | chr5.4:31038663-31038682 | None:intergenic | 45.0% | |
| AGTTACCCGAACACTTTGGT+GGG | + | chr5.4:31040748-31040767 | None:intergenic | 45.0% | |
| ATGTATCATCCAACTCGAGG+TGG | - | chr5.4:31037636-31037655 | MS.gene53070:CDS | 45.0% | |
| CTCTTGCTTTCTTTCCTCAC+GGG | + | chr5.4:31041992-31042011 | None:intergenic | 45.0% | |
| CTGAGGATAGGATAAAGTGC+AGG | + | chr5.4:31039084-31039103 | None:intergenic | 45.0% | |
| CTGCACTTTATCCTATCCTC+AGG | - | chr5.4:31039082-31039101 | MS.gene53070:intron | 45.0% | |
| GCAGGCTTAAGGAGAAACTT+AGG | + | chr5.4:31039066-31039085 | None:intergenic | 45.0% | |
| GTAGAAGGATCACAACAAGC+TGG | - | chr5.4:31041126-31041145 | MS.gene53070:intron | 45.0% | |
| GTGGTACCCTTGACTGAAAA+TGG | + | chr5.4:31040709-31040728 | None:intergenic | 45.0% | |
| GTGTAGTTACCCGAACACTT+TGG | + | chr5.4:31040752-31040771 | None:intergenic | 45.0% | |
| TAGTTACCCGAACACTTTGG+TGG | + | chr5.4:31040749-31040768 | None:intergenic | 45.0% | |
| TGGTGTATGCAAGACCTTTG+AGG | + | chr5.4:31041842-31041861 | None:intergenic | 45.0% | |
| TTCCTATACCTAAGGCCCTA+GGG | + | chr5.4:31041382-31041401 | None:intergenic | 45.0% | |
| TTCTTGAAGTGTACTCCCTC+CGG | - | chr5.4:31038511-31038530 | MS.gene53070:intron | 45.0% | |
| TTGTGGAAATCAGGGTTGTG+TGG | + | chr5.4:31037805-31037824 | None:intergenic | 45.0% | |
| TTTCCTATACCTAAGGCCCT+AGG | + | chr5.4:31041383-31041402 | None:intergenic | 45.0% | |
| ! | AGCAAGAGAAGCGTGAGAAA+CGG | - | chr5.4:31042004-31042023 | MS.gene53070:intron | 45.0% |
| ! | TTAATTGGGGTTAGTGCAGC+AGG | + | chr5.4:31038416-31038435 | None:intergenic | 45.0% |
| !! | GGGAGTATTATGCAAGCTGA+AGG | - | chr5.4:31038665-31038684 | MS.gene53070:intron | 45.0% |
| AGGAACCAGGTTCTTCCCAA+GGG | + | chr5.4:31041822-31041841 | None:intergenic | 50.0% | |
| CATAGTCTCAAGGCTCCTGT+TGG | - | chr5.4:31038026-31038045 | MS.gene53070:intron | 50.0% | |
| CCATCCTCTTTCCTTCTCCT+AGG | - | chr5.4:31039361-31039380 | MS.gene53070:intron | 50.0% | |
| CCTAGGAGAAGGAAAGAGGA+TGG | + | chr5.4:31039364-31039383 | None:intergenic | 50.0% | |
| CCTTTCTGCCATCTACCAAC+AGG | + | chr5.4:31038044-31038063 | None:intergenic | 50.0% | |
| GAGAAGACGGGAAGAAAGGA+AGG | - | chr5.4:31041942-31041961 | MS.gene53070:intron | 50.0% | |
| GCAACCTAGGAGAAGGAAAG+AGG | + | chr5.4:31039368-31039387 | None:intergenic | 50.0% | |
| GGAAGAACCTGGTTCCTCAA+AGG | - | chr5.4:31041825-31041844 | MS.gene53070:intron | 50.0% | |
| GGGTCTACAGCAGAAGACTT+AGG | - | chr5.4:31039687-31039706 | MS.gene53070:intron | 50.0% | |
| TCAATGGAGGGGAGTGGAAA+TGG | - | chr5.4:31041321-31041340 | MS.gene53070:intron | 50.0% | |
| TGAAATCACCCTAGGGCCTT+AGG | - | chr5.4:31041371-31041390 | MS.gene53070:intron | 50.0% | |
| TGGATGAAGAACAGCTGGGT+GGG | - | chr5.4:31039877-31039896 | MS.gene53070:intron | 50.0% | |
| TTGGATGAAGAACAGCTGGG+TGG | - | chr5.4:31039876-31039895 | MS.gene53070:intron | 50.0% | |
| ! | CCTGTTGGTAGATGGCAGAA+AGG | - | chr5.4:31038041-31038060 | MS.gene53070:intron | 50.0% |
| ! | GGTTTGCTTGTGGTGACATG+TGG | - | chr5.4:31039898-31039917 | MS.gene53070:intron | 50.0% |
| ! | TCAAGGCTCCTGTTGGTAGA+TGG | - | chr5.4:31038033-31038052 | MS.gene53070:intron | 50.0% |
| ! | TGCAAGACCTTTGAGGAACC+AGG | + | chr5.4:31041835-31041854 | None:intergenic | 50.0% |
| AACCAGGTTCTTCCCAAGGG+CGG | + | chr5.4:31041819-31041838 | None:intergenic | 55.0% | |
| AAGAGGAGGAGCAGGCAATG+AGG | - | chr5.4:31039577-31039596 | MS.gene53070:intron | 55.0% | |
| AAGCGTGCTAGTCGTCCTCA+AGG | - | chr5.4:31039621-31039640 | MS.gene53070:intron | 55.0% | |
| AAGGTCACGCTGAAGCAGCA+AGG | - | chr5.4:31039712-31039731 | MS.gene53070:intron | 55.0% | |
| AATGAGGGAAGCTCTCGGCT+TGG | - | chr5.4:31039593-31039612 | MS.gene53070:intron | 55.0% | |
| ACTTACGATCTCGACCGCCA+CGG | + | chr5.4:31037665-31037684 | None:intergenic | 55.0% | |
| AGAGGAGGAGCAGGCAATGA+GGG | - | chr5.4:31039578-31039597 | MS.gene53070:intron | 55.0% | |
| AGGTCACGCTGAAGCAGCAA+GGG | - | chr5.4:31039713-31039732 | MS.gene53070:intron | 55.0% | |
| ATGGAGGGGAGTGGAAATGG+TGG | - | chr5.4:31041324-31041343 | MS.gene53070:intron | 55.0% | |
| CACCCTAGGGCCTTAGGTAT+AGG | - | chr5.4:31041377-31041396 | MS.gene53070:intron | 55.0% | |
| CAGGCAATGAGGGAAGCTCT+CGG | - | chr5.4:31039588-31039607 | MS.gene53070:intron | 55.0% | |
| GAGGAACCAGGTTCTTCCCA+AGG | + | chr5.4:31041823-31041842 | None:intergenic | 55.0% | |
| GCAGCAAGGGTTCAAGGTGT+TGG | - | chr5.4:31039726-31039745 | MS.gene53070:intron | 55.0% | |
| GCTGAAGCAGCAAGGGTTCA+AGG | - | chr5.4:31039720-31039739 | MS.gene53070:intron | 55.0% | |
| GGTCTTGCATACACCAGCTG+AGG | - | chr5.4:31041846-31041865 | MS.gene53070:intron | 55.0% | |
| GTGGTTTCAATGGAGGGGAG+TGG | - | chr5.4:31041315-31041334 | MS.gene53070:intron | 55.0% | |
| TACCCGAACACTTTGGTGGG+TGG | + | chr5.4:31040745-31040764 | None:intergenic | 55.0% | |
| TGAAAAGCGGCATTCCCGTG+AGG | - | chr5.4:31041975-31041994 | MS.gene53070:intron | 55.0% | |
| TGAGGACGACTAGCACGCTT+AGG | + | chr5.4:31039621-31039640 | None:intergenic | 55.0% | |
| ! | ACCCGAACACTTTGGTGGGT+GGG | + | chr5.4:31040744-31040763 | None:intergenic | 55.0% |
| ! | TCCCCACCCACCAAAGTGTT+CGG | - | chr5.4:31040739-31040758 | MS.gene53070:intron | 55.0% |
| CTGGTGCACGATGGCGCTAT+AGG | + | chr5.4:31038125-31038144 | None:intergenic | 60.0% | |
| GGGTGGGGAGATGGATACTG+TGG | + | chr5.4:31040728-31040747 | None:intergenic | 60.0% | |
| GTGCAGAGAACTCCGCCCTT+GGG | - | chr5.4:31041804-31041823 | MS.gene53070:intron | 60.0% | |
| TGTGCAGAGAACTCCGCCCT+TGG | - | chr5.4:31041803-31041822 | MS.gene53070:intron | 60.0% | |
| ! | CACTTTGGTGGGTGGGGAGA+TGG | + | chr5.4:31040737-31040756 | None:intergenic | 60.0% |
| ! | CAGCTGGGTGGGTTTGCTTG+TGG | - | chr5.4:31039888-31039907 | MS.gene53070:intron | 60.0% |
| ! | CCCCACCCACCAAAGTGTTC+GGG | - | chr5.4:31040740-31040759 | MS.gene53070:intron | 60.0% |
| ! | CCCGAACACTTTGGTGGGTG+GGG | + | chr5.4:31040743-31040762 | None:intergenic | 60.0% |
| CTCCGCCCTTGGGAAGAACC+TGG | - | chr5.4:31041814-31041833 | MS.gene53070:intron | 65.0% | |
| ACTCGAGGTGGCGTCCGTGG+CGG | - | chr5.4:31037648-31037667 | MS.gene53070:CDS | 70.0% | |
| CCAACTCGAGGTGGCGTCCG+TGG | - | chr5.4:31037645-31037664 | MS.gene53070:CDS | 70.0% | |
| CCACGGACGCCACCTCGAGT+TGG | + | chr5.4:31037648-31037667 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 31037636 | 31042098 | 31037636 | ID=MS.gene53070 |
| chr5.4 | mRNA | 31037636 | 31042098 | 31037636 | ID=MS.gene53070.t1;Parent=MS.gene53070 |
| chr5.4 | exon | 31042056 | 31042098 | 31042056 | ID=MS.gene53070.t1.exon1;Parent=MS.gene53070.t1 |
| chr5.4 | CDS | 31042056 | 31042098 | 31042056 | ID=cds.MS.gene53070.t1;Parent=MS.gene53070.t1 |
| chr5.4 | exon | 31041672 | 31041761 | 31041672 | ID=MS.gene53070.t1.exon2;Parent=MS.gene53070.t1 |
| chr5.4 | CDS | 31041672 | 31041761 | 31041672 | ID=cds.MS.gene53070.t1;Parent=MS.gene53070.t1 |
| chr5.4 | exon | 31039977 | 31040244 | 31039977 | ID=MS.gene53070.t1.exon3;Parent=MS.gene53070.t1 |
| chr5.4 | CDS | 31039977 | 31040244 | 31039977 | ID=cds.MS.gene53070.t1;Parent=MS.gene53070.t1 |
| chr5.4 | exon | 31037636 | 31037924 | 31037636 | ID=MS.gene53070.t1.exon4;Parent=MS.gene53070.t1 |
| chr5.4 | CDS | 31037636 | 31037924 | 31037636 | ID=cds.MS.gene53070.t1;Parent=MS.gene53070.t1 |
| Gene Sequence |
| Protein sequence |
