AlfalfaGEDB | MS.gene073670

M. sativa cultivar XinJiangDaYe / MS.gene073670

KEGG: K03094
GO: GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0019538 GO:0019941 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0051603 GO:0071704 GO:1901564 GO:1901575
PFAM: PF01466.22 PF03931.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073670.t1	AAD34458.1	100	153	0	0	4	156	1	153	6.20E-78	300.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073670.t1	Q9FHW7	77.1	170	23	1	3	156	2	171	7.9e-66	251.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073670.t1	Q9XF99	100.0	153	0	0	4	156	1	153	4.4e-78	300.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04918	MS.gene073670	0.831981	1.23E-55	-1.69E-46
MS.gene04919	MS.gene073670	0.831395	1.71E-55	-1.69E-46
MS.gene04920	MS.gene073670	0.842973	1.86E-58	-1.69E-46
MS.gene049254	MS.gene073670	0.821807	3.32E-53	-1.69E-46
MS.gene049283	MS.gene073670	0.848087	7.66E-60	-1.69E-46
MS.gene049343	MS.gene073670	0.806715	7.19E-50	-1.69E-46
MS.gene049499	MS.gene073670	0.829145	6.06E-55	-1.69E-46
MS.gene049580	MS.gene073670	0.836077	1.16E-56	-1.69E-46
MS.gene049652	MS.gene073670	0.814725	1.33E-51	-1.69E-46
MS.gene049680	MS.gene073670	0.851043	1.15E-60	-1.69E-46
MS.gene05029	MS.gene073670	0.805955	1.04E-49	-1.69E-46
MS.gene050752	MS.gene073670	0.813425	2.58E-51	-1.69E-46
MS.gene050945	MS.gene073670	0.83337	5.55E-56	-1.69E-46
MS.gene050955	MS.gene073670	0.817997	2.47E-52	-1.69E-46
MS.gene051003	MS.gene073670	0.808884	2.49E-50	-1.69E-46
MS.gene051343	MS.gene073670	0.851937	6.41E-61	-1.69E-46
MS.gene051597	MS.gene073670	0.830088	3.58E-55	-1.69E-46
MS.gene051699	MS.gene073670	0.849041	4.17E-60	-1.69E-46
MS.gene051731	MS.gene073670	0.819808	9.56E-53	-1.69E-46
MS.gene051902	MS.gene073670	0.82568	4.11E-54	-1.69E-46
MS.gene051975	MS.gene073670	0.8305	2.84E-55	-1.69E-46
MS.gene052072	MS.gene073670	0.804319	2.29E-49	-1.69E-46
MS.gene052108	MS.gene073670	0.849724	2.69E-60	-1.69E-46
MS.gene052519	MS.gene073670	0.801621	8.26E-49	-1.69E-46
MS.gene052533	MS.gene073670	0.805986	1.02E-49	-1.69E-46
MS.gene052793	MS.gene073670	0.812291	4.56E-51	-1.69E-46
MS.gene052954	MS.gene073670	0.81754	3.13E-52	-1.69E-46
MS.gene053045	MS.gene073670	0.8367	8.02E-57	-1.69E-46
MS.gene053272	MS.gene073670	-0.811798	5.85E-51	-1.69E-46
MS.gene053298	MS.gene073670	0.80783	4.17E-50	-1.69E-46
MS.gene053340	MS.gene073670	0.801162	1.03E-48	-1.69E-46
MS.gene05364	MS.gene073670	0.804088	2.56E-49	-1.69E-46
MS.gene053931	MS.gene073670	0.800897	1.16E-48	-1.69E-46
MS.gene053963	MS.gene073670	0.8245	7.81E-54	-1.69E-46
MS.gene054222	MS.gene073670	0.801151	1.03E-48	-1.69E-46
MS.gene054403	MS.gene073670	0.821029	5.02E-53	-1.69E-46
MS.gene054413	MS.gene073670	0.800066	1.72E-48	-1.69E-46
MS.gene054657	MS.gene073670	0.801047	1.08E-48	-1.69E-46
MS.gene05469	MS.gene073670	0.812772	3.58E-51	-1.69E-46
MS.gene054957	MS.gene073670	0.822259	2.61E-53	-1.69E-46
MS.gene055513	MS.gene073670	0.814885	1.23E-51	-1.69E-46
MS.gene055841	MS.gene073670	0.816278	6.00E-52	-1.69E-46
MS.gene056366	MS.gene073670	0.814373	1.59E-51	-1.69E-46
MS.gene056699	MS.gene073670	0.843643	1.23E-58	-1.69E-46
MS.gene056776	MS.gene073670	0.825804	3.84E-54	-1.69E-46
MS.gene056986	MS.gene073670	0.839436	1.59E-57	-1.69E-46
MS.gene057102	MS.gene073670	0.862894	3.67E-64	-1.69E-46
MS.gene057155	MS.gene073670	0.813983	1.94E-51	-1.69E-46
MS.gene057208	MS.gene073670	0.855417	6.40E-62	-1.69E-46
MS.gene057694	MS.gene073670	0.812154	4.89E-51	-1.69E-46
MS.gene057705	MS.gene073670	0.81023	1.28E-50	-1.69E-46
MS.gene05781	MS.gene073670	0.804924	1.71E-49	-1.69E-46
MS.gene057890	MS.gene073670	-0.801449	8.96E-49	-1.69E-46
MS.gene057893	MS.gene073670	-0.819069	1.41E-52	-1.69E-46
MS.gene057999	MS.gene073670	0.807086	6.00E-50	-1.69E-46
MS.gene058008	MS.gene073670	0.843063	1.76E-58	-1.69E-46
MS.gene058009	MS.gene073670	0.804267	2.35E-49	-1.69E-46
MS.gene058592	MS.gene073670	0.820642	6.16E-53	-1.69E-46
MS.gene058708	MS.gene073670	-0.817209	3.71E-52	-1.69E-46
MS.gene058781	MS.gene073670	0.805884	1.08E-49	-1.69E-46
MS.gene058783	MS.gene073670	0.806898	6.58E-50	-1.69E-46
MS.gene059146	MS.gene073670	0.84007	1.08E-57	-1.69E-46
MS.gene059227	MS.gene073670	0.808542	2.94E-50	-1.69E-46
MS.gene05952	MS.gene073670	0.825233	5.24E-54	-1.69E-46
MS.gene05985	MS.gene073670	-0.876692	1.14E-68	-1.69E-46
MS.gene059901	MS.gene073670	-0.819976	8.75E-53	-1.69E-46
MS.gene059935	MS.gene073670	0.813329	2.71E-51	-1.69E-46
MS.gene06018	MS.gene073670	0.837963	3.81E-57	-1.69E-46
MS.gene060244	MS.gene073670	0.840793	7.02E-58	-1.69E-46
MS.gene060365	MS.gene073670	0.847644	1.02E-59	-1.69E-46
MS.gene060527	MS.gene073670	0.820371	7.11E-53	-1.69E-46
MS.gene060935	MS.gene073670	0.853602	2.14E-61	-1.69E-46
MS.gene060937	MS.gene073670	0.857307	1.78E-62	-1.69E-46
MS.gene061100	MS.gene073670	0.812518	4.07E-51	-1.69E-46
MS.gene061160	MS.gene073670	0.80549	1.30E-49	-1.69E-46
MS.gene061243	MS.gene073670	0.826999	1.99E-54	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene073670	MS.gene59610	PPI
MS.gene98172	MS.gene073670	PPI
MS.gene073670	MS.gene004511	PPI
MS.gene073670	MS.gene25471	PPI
MS.gene073670	MS.gene33667	PPI
MS.gene073670	MS.gene068281	PPI
MS.gene25469	MS.gene073670	PPI
MS.gene073670	MS.gene79720	PPI
MS.gene073670	MS.gene055864	PPI
MS.gene047254	MS.gene073670	PPI
MS.gene79719	MS.gene073670	PPI
MS.gene073670	MS.gene33411	PPI
MS.gene073670	MS.gene34691	PPI
MS.gene24959	MS.gene073670	PPI
MS.gene00939	MS.gene073670	PPI
MS.gene92141	MS.gene073670	PPI
MS.gene073670	MS.gene002824	PPI
MS.gene073670	MS.gene35971	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073670.t1	MTR_5g022730	98.052	154	3	0	3	156	2	155	2.71e-110	310
MS.gene073670.t1	MTR_5g022710	96.104	154	6	0	3	156	2	155	1.92e-108	305
MS.gene073670.t1	MTR_7g021400	87.179	156	20	0	1	156	1	156	5.63e-93	266
MS.gene073670.t1	MTR_7g094150	86.538	156	21	0	1	156	1	156	1.58e-91	263
MS.gene073670.t1	MTR_7g094170	85.256	156	23	0	1	156	1	156	5.22e-90	259
MS.gene073670.t1	MTR_7g021380	83.333	156	26	0	1	156	1	156	4.29e-86	249
MS.gene073670.t1	MTR_3g110048	76.582	158	35	1	1	156	1	158	1.20e-85	248
MS.gene073670.t1	MTR_4g032400	78.846	156	32	1	2	156	8	163	1.40e-85	248
MS.gene073670.t1	MTR_7g094120	75.159	157	37	1	2	156	3	159	5.24e-84	244
MS.gene073670.t1	MTR_4g032450	73.885	157	40	1	1	156	19	175	6.38e-84	244
MS.gene073670.t1	MTR_8g056060	73.885	157	40	1	1	156	1	157	1.82e-79	232
MS.gene073670.t1	MTR_7g094280	72.152	158	42	2	1	156	1	158	6.79e-79	231
MS.gene073670.t1	MTR_5g085030	72.078	154	42	1	3	155	2	155	2.49e-77	227
MS.gene073670.t1	MTR_8g468480	69.677	155	46	1	3	156	2	156	5.67e-76	223
MS.gene073670.t1	MTR_4g032510	68.790	157	41	3	2	156	3	153	3.14e-71	211
MS.gene073670.t1	MTR_7g094310	68.987	158	37	3	1	156	1	148	4.14e-71	211
MS.gene073670.t1	MTR_4g032460	72.258	155	36	2	3	156	2	150	1.90e-70	209
MS.gene073670.t1	MTR_4g032500	66.667	156	45	2	2	156	3	152	1.07e-69	207
MS.gene073670.t1	MTR_4g033455	60.390	154	61	0	3	156	7	160	5.82e-65	196
MS.gene073670.t1	MTR_5g082340	66.452	155	40	2	3	156	2	145	3.85e-64	193
MS.gene073670.t1	MTR_4g017860	56.410	195	42	4	5	156	26	220	1.71e-63	194
MS.gene073670.t1	MTR_1g099870	84.314	102	14	1	57	156	2	103	6.75e-59	178
MS.gene073670.t1	MTR_4g021390	58.710	155	61	1	2	156	4	155	1.11e-58	179
MS.gene073670.t1	MTR_4g033460	60.000	140	56	0	3	142	7	146	2.42e-58	182
MS.gene073670.t1	MTR_4g033460	60.215	93	29	1	41	133	161	245	1.79e-30	110
MS.gene073670.t1	MTR_8g089730	69.919	123	20	1	34	156	1	106	2.73e-50	157
MS.gene073670.t1	MTR_7g094320	56.051	157	28	2	1	156	1	117	1.84e-48	152
MS.gene073670.t1	MTR_4g032420	61.417	127	34	3	31	156	38	150	6.05e-47	150
MS.gene073670.t1	MTR_7g006370	54.610	141	55	2	2	142	4	135	8.42e-44	141
MS.gene073670.t1	MTR_4g032470	51.370	146	27	2	12	156	32	134	1.13e-43	141
MS.gene073670.t1	MTR_7g094410	53.846	156	30	4	1	114	1	156	1.17e-41	137
MS.gene073670.t1	MTR_4g127240	66.990	103	28	4	40	140	26	124	1.90e-40	132
MS.gene073670.t1	MTR_4g131980	63.866	119	37	3	3	119	2	116	2.87e-40	132
MS.gene073670.t1	MTR_7g094360	47.093	172	38	4	1	119	1	172	7.87e-40	133
MS.gene073670.t1	MTR_8g056090	49.359	156	46	6	1	154	1	125	6.18e-37	124
MS.gene073670.t1	MTR_4g119422	48.980	147	68	2	2	146	227	368	2.71e-35	125
MS.gene073670.t1	MTR_1g112590	39.355	155	78	2	8	146	1	155	1.60e-32	113
MS.gene073670.t1	MTR_7g071200	71.014	69	19	1	89	156	4	72	1.16e-28	100
MS.gene073670.t1	MTR_2g066010	41.722	151	76	5	8	155	20	161	3.02e-27	101
MS.gene073670.t1	MTR_4g032520	44.444	144	38	4	29	154	1	120	3.41e-27	99.4
MS.gene073670.t1	MTR_2g065720	39.873	158	83	5	1	155	30	178	2.82e-26	99.0
MS.gene073670.t1	MTR_7g094350	50.459	109	32	2	1	109	1	87	2.93e-25	95.9
MS.gene073670.t1	MTR_7g094350	51.685	89	39	3	48	135	102	187	7.35e-20	82.0
MS.gene073670.t1	MTR_5g096950	37.736	159	78	4	1	155	1	142	1.71e-23	90.1
MS.gene073670.t1	MTR_4g032540	65.079	63	21	1	90	151	70	132	3.89e-23	88.6
MS.gene073670.t1	MTR_2g018980	34.667	150	85	3	8	156	3	140	2.67e-22	87.0
MS.gene073670.t1	MTR_1g042510	35.256	156	63	4	8	146	1	135	3.93e-22	89.7
MS.gene073670.t1	MTR_1g112570	36.691	139	63	4	8	128	1	132	1.16e-20	85.9
MS.gene073670.t1	MTR_5g078680	32.051	156	68	3	8	146	1	135	2.21e-19	82.0
MS.gene073670.t1	MTR_6g053620	36.806	144	81	5	8	146	17	155	3.46e-19	82.8
MS.gene073670.t1	MTR_6g053620	36.806	144	81	5	8	146	17	155	3.84e-19	82.8
MS.gene073670.t1	MTR_8g007195	34.286	140	80	4	10	143	13	146	2.24e-18	80.1
MS.gene073670.t1	MTR_7g077810	34.722	144	84	4	8	146	18	156	7.78e-18	79.0
MS.gene073670.t1	MTR_2g100825	32.667	150	92	4	1	146	4	148	5.04e-17	76.3
MS.gene073670.t1	MTR_2g100830	33.793	145	80	5	10	146	13	149	7.42e-17	75.9
MS.gene073670.t1	MTR_8g007185	32.877	146	87	4	8	147	11	151	8.12e-17	75.5
MS.gene073670.t1	MTR_8g007205	32.877	146	87	4	8	147	11	151	1.26e-16	75.1
MS.gene073670.t1	MTR_7g036780	34.043	141	82	6	1	135	1	136	1.98e-15	71.2
MS.gene073670.t1	MTR_4g131910	39.286	112	58	2	5	112	133	238	1.15e-14	69.3
MS.gene073670.t1	MTR_8g030670	30.345	145	91	3	10	149	20	159	1.98e-14	69.7
MS.gene073670.t1	MTR_3g061700	33.684	95	56	2	53	146	1	89	1.98e-12	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073670.t1	AT5G42190	77.059	170	23	1	3	156	2	171	2.43e-85	248
MS.gene073670.t1	AT1G20140	72.393	163	38	2	1	156	1	163	3.63e-83	242
MS.gene073670.t1	AT1G75950	77.987	159	29	1	4	156	2	160	3.74e-83	242
MS.gene073670.t1	AT2G25700	68.712	163	44	2	1	156	1	163	1.85e-78	230
MS.gene073670.t1	AT4G34210	70.130	154	42	2	4	156	2	152	1.78e-76	224
MS.gene073670.t1	AT4G34470	69.481	154	43	2	4	156	2	152	1.11e-75	223
MS.gene073670.t1	AT3G21860	67.097	155	45	3	4	156	2	152	4.85e-68	203
MS.gene073670.t1	AT3G21850	64.516	155	50	3	4	156	2	153	7.02e-67	200
MS.gene073670.t1	AT3G60010	64.331	157	47	3	5	156	2	154	2.10e-66	199
MS.gene073670.t1	AT2G03170	62.338	154	51	2	4	156	2	149	2.27e-63	191
MS.gene073670.t1	AT2G03190	55.422	166	61	3	4	156	2	167	7.23e-59	181
MS.gene073670.t1	AT3G60020	57.692	156	54	3	7	156	4	153	5.59e-57	175
MS.gene073670.t1	AT3G21830	56.494	154	63	2	4	156	2	152	1.04e-55	172
MS.gene073670.t1	AT2G03160	48.677	189	61	3	4	156	2	190	1.05e-55	174
MS.gene073670.t1	AT2G20160	54.902	153	63	2	4	155	2	149	2.07e-53	166
MS.gene073670.t1	AT3G25650	57.229	166	58	5	4	156	2	167	3.07e-53	167
MS.gene073670.t1	AT1G10230	56.774	155	64	2	4	155	2	156	4.76e-52	163
MS.gene073670.t1	AT3G21840	58.333	120	44	3	4	121	2	117	1.72e-37	125
MS.gene073670.t1	AT3G53060	66.279	86	22	3	29	113	1	80	8.25e-32	109
MS.gene073670.t1	AT3G61415	33.333	144	86	4	8	146	18	156	2.46e-16	74.7
MS.gene073670.t1	AT3G61415	33.333	144	86	4	8	146	18	156	2.57e-16	74.7
MS.gene073670.t1	AT2G45950	31.944	144	88	4	8	146	18	156	3.69e-16	74.3
MS.gene073670.t1	AT2G45950	31.944	144	88	4	8	146	18	156	3.69e-16	74.3
MS.gene073670.t1	AT2G45950	31.944	144	88	4	8	146	18	156	3.78e-16	74.3
MS.gene073670.t1	AT2G45950	31.944	144	88	4	8	146	18	156	3.78e-16	74.3
MS.gene073670.t1	AT2G45950	31.944	144	88	4	8	146	18	156	3.78e-16	74.3

Find 38 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGAATATCAAGAGCTTGC+TGG	0.358298	1.1:+35535986	MS.gene073670:CDS
GGTCGATGAAGCGGTTGCTT+TGG	0.364221	1.1:+35534243	MS.gene073670:CDS
GACTTAAGCTCATCCTCGTT+TGG	0.386875	1.1:-35534406	None:intergenic
CAACGTTACCAGCAAGATCT+TGG	0.386921	1.1:+35534327	MS.gene073670:CDS
CGAGGATGAGCTTAAGTCTT+GGG	0.419753	1.1:+35534411	MS.gene073670:CDS
CGAGTTCGTCAAGGTTGATC+AGG	0.435035	1.1:+35534438	MS.gene073670:CDS
CACCTTCGCCAAGATCTTGC+TGG	0.436666	1.1:-35534335	None:intergenic
AATGTCTTGCGGATCTCCTC+TGG	0.448832	1.1:-35536053	None:intergenic
TGATCATGTCTGCAACAGTC+TGG	0.461006	1.1:-35536019	None:intergenic
AAGATCTTGCTGGTAACGTT+GGG	0.477857	1.1:-35534325	None:intergenic
CATGTCTGCAACAGTCTGGC+AGG	0.496105	1.1:-35536015	None:intergenic
TGATTTCTCACCTGAGGAAG+AGG	0.505723	1.1:+35536088	MS.gene073670:CDS
TGCTGGTAACGTTGGGAAGA+GGG	0.508109	1.1:-35534318	None:intergenic
TTGCTGGTAACGTTGGGAAG+AGG	0.523250	1.1:-35534319	None:intergenic
CAAGATCTTGCTGGTAACGT+TGG	0.530853	1.1:-35534326	None:intergenic
CGAACTTCCTCCTCTTCCTC+AGG	0.533819	1.1:-35536098	None:intergenic
GACTGTTGCAGACATGATCA+AGG	0.534990	1.1:+35536022	MS.gene073670:CDS
CTGATCAACCTTGACGAACT+CGG	0.543997	1.1:-35534437	None:intergenic
AGCATCATTCAAATGCCCAT+TGG	0.546088	1.1:-35536130	None:intergenic
ACGAGGATGAGCTTAAGTCT+TGG	0.546572	1.1:+35534410	MS.gene073670:CDS
AGGAAGAGGAGGAAGTTCGT+AGG	0.548370	1.1:+35536102	MS.gene073670:CDS
GGAAGAGGAGGAAGTTCGTA+GGG	0.553401	1.1:+35536103	MS.gene073670:CDS
AGTTCGTAGGGAAAACCAAT+GGG	0.562143	1.1:+35536115	MS.gene073670:CDS
AAGTTCGTAGGGAAAACCAA+TGG	0.564773	1.1:+35536114	MS.gene073670:CDS
TCTTGATGTTGAATGTCTTG+CGG	0.592623	1.1:-35536064	None:intergenic
TTGGGATTCCGAGTTCGTCA+AGG	0.598524	1.1:+35534429	MS.gene073670:CDS
GAAGATGATTGCGCTGACAG+TGG	0.607194	1.1:+35534292	MS.gene073670:CDS
GACCTTCGAGGTCGATGAAG+CGG	0.610768	1.1:+35534234	MS.gene073670:CDS
TTCCGACGGTGAGACCTTCG+AGG	0.613590	1.1:+35534222	MS.gene073670:CDS
ATCACTCTGAAGAGTTCCGA+CGG	0.622850	1.1:+35534208	MS.gene073670:CDS
AACCGCTTCATCGACCTCGA+AGG	0.623664	1.1:-35534236	None:intergenic
TACCAGCAAGATCTTGGCGA+AGG	0.627734	1.1:+35534333	MS.gene073670:CDS
TGCTGAAGACAAACCAAACG+AGG	0.629605	1.1:+35534393	MS.gene073670:CDS
TTTCTCACCTGAGGAAGAGG+AGG	0.645844	1.1:+35536091	MS.gene073670:CDS
CAAGAATGATTTCTCACCTG+AGG	0.653595	1.1:+35536082	MS.gene073670:CDS
ACTGTTGCAGACATGATCAA+GGG	0.659883	1.1:+35536023	MS.gene073670:CDS
GACCTCGAAGGTCTCACCGT+CGG	0.662584	1.1:-35534224	None:intergenic
GATCAAGGGAAAGACACCAG+AGG	0.742039	1.1:+35536037	MS.gene073670:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTATTTATTAATAATAA+AGG	+	chr1.1:35534631-35534650	MS.gene073670:intron	0.0%
!!	TTATTAATAATAAAGGATTA+GGG	+	chr1.1:35534638-35534657	MS.gene073670:intron	10.0%
!!	TTTATTAATAATAAAGGATT+AGG	+	chr1.1:35534637-35534656	MS.gene073670:intron	10.0%
!!!	TTATTTAATTTAAATGGTTA+AGG	+	chr1.1:35535912-35535931	MS.gene073670:intron	10.0%
!!	AAAAGAATAAGAATATCATT+TGG	-	chr1.1:35535008-35535027	None:intergenic	15.0%
!!!	GGTTTATTCTTTTAAATTTT+AGG	+	chr1.1:35535671-35535690	MS.gene073670:intron	15.0%
!!!	TACTTAGGTTTTTTTAATAA+TGG	-	chr1.1:35535750-35535769	None:intergenic	15.0%
!!!	TTTGACATTTTTTTCTTTTT+AGG	+	chr1.1:35535953-35535972	MS.gene073670:intron	15.0%
!!	AAGAATATCATTTGGATATT+CGG	-	chr1.1:35535000-35535019	None:intergenic	20.0%
!!	AATAAAGAACATATAAAGCA+TGG	+	chr1.1:35535510-35535529	MS.gene073670:intron	20.0%
!!	AATCTGAATGAATAGTTTAT+TGG	+	chr1.1:35534599-35534618	MS.gene073670:intron	20.0%
!!	TAAGGCTGATTATATATTAT+TGG	+	chr1.1:35535930-35535949	MS.gene073670:intron	20.0%
!!	TTCTAATGTATTTGATTAAG+TGG	+	chr1.1:35535204-35535223	MS.gene073670:intron	20.0%
!!!	ATGTTTATGTTATGTTTTGT+TGG	+	chr1.1:35535066-35535085	MS.gene073670:intron	20.0%
!!!	ATTTTAATTTGTCTTCTGTT+TGG	+	chr1.1:35534725-35534744	MS.gene073670:intron	20.0%
!!!	TTGTAGGATATTGTTATTTA+TGG	+	chr1.1:35534890-35534909	MS.gene073670:intron	20.0%
!!!	TTTATCGCTTTATTTGATTT+GGG	+	chr1.1:35534517-35534536	MS.gene073670:intron	20.0%
!!!	TTTTAATTTGTCTTCTGTTT+GGG	+	chr1.1:35534726-35534745	MS.gene073670:intron	20.0%
!!!	TTTTATCGCTTTATTTGATT+TGG	+	chr1.1:35534516-35534535	MS.gene073670:intron	20.0%
!	GTATGATATCATTGTTTGTA+TGG	+	chr1.1:35535391-35535410	MS.gene073670:intron	25.0%
!	TTAAAAAAACCTAAGTAGTC+TGG	+	chr1.1:35535753-35535772	MS.gene073670:intron	25.0%
!!	ACATTGTCTCAATATTTTGT+TGG	-	chr1.1:35535562-35535581	None:intergenic	25.0%
!!	AGCGATTTTATGTTTTCATT+TGG	+	chr1.1:35534944-35534963	MS.gene073670:intron	25.0%
!!	TAATAAAGGATTAGGGTTTT+TGG	+	chr1.1:35534645-35534664	MS.gene073670:intron	25.0%
!!!	ATTAAGTGGTTCTAATTTTC+AGG	+	chr1.1:35535218-35535237	MS.gene073670:intron	25.0%
!!!	ATTTGATTTGGGTTTTGTTT+TGG	+	chr1.1:35534528-35534547	MS.gene073670:intron	25.0%
!!!	CATCTTGGTAAGTTTTTTTA+GGG	+	chr1.1:35534477-35534496	MS.gene073670:intron	25.0%
!!!	TCATCTTGGTAAGTTTTTTT+AGG	+	chr1.1:35534476-35534495	MS.gene073670:intron	25.0%
!!!	TGGTTCTTTTTAAGACTAAA+CGG	+	chr1.1:35535431-35535450	MS.gene073670:intron	25.0%
	AAATATTCGTCGTGTTTGTT+TGG	+	chr1.1:35535109-35535128	MS.gene073670:intron	30.0%
	AACAAACAAACAGCCATATT+TGG	-	chr1.1:35535700-35535719	None:intergenic	30.0%
	AACAATAATCCAGACTACTT+AGG	-	chr1.1:35535765-35535784	None:intergenic	30.0%
	ACAAACAAACAGCCATATTT+GGG	-	chr1.1:35535699-35535718	None:intergenic	30.0%
	ACAACTTCTAGTAAATGTTG+TGG	+	chr1.1:35535649-35535668	MS.gene073670:intron	30.0%
	ATGAAATTAAACTAGCTGCA+AGG	+	chr1.1:35535469-35535488	MS.gene073670:intron	30.0%
	CAACTTCTAGTAAATGTTGT+GGG	+	chr1.1:35535650-35535669	MS.gene073670:intron	30.0%
	CCAGAAAACCCTAATAATTT+AGG	-	chr1.1:35534567-35534586	None:intergenic	30.0%
	TACGCGTTTACTGAAAATTA+AGG	+	chr1.1:35535242-35535261	MS.gene073670:intron	30.0%
	TGAAATTAAACTAGCTGCAA+GGG	+	chr1.1:35535470-35535489	MS.gene073670:intron	30.0%
	TTGTTGAGGAAATTGAAGTT+TGG	+	chr1.1:35535780-35535799	MS.gene073670:intron	30.0%
!	CCTAAATTATTAGGGTTTTC+TGG	+	chr1.1:35534564-35534583	MS.gene073670:intron	30.0%
!!	AAATTTTAGGAGCCCAAATA+TGG	+	chr1.1:35535684-35535703	MS.gene073670:intron	30.0%
!!	AATTATTAGGGTTTTCTGGT+TGG	+	chr1.1:35534568-35534587	MS.gene073670:intron	30.0%
!!	CTGTTTGGGTTGAATTTAAT+GGG	+	chr1.1:35534740-35534759	MS.gene073670:intron	30.0%
!!	GTGTTGCTGAAAATTGTTTT+TGG	+	chr1.1:35535721-35535740	MS.gene073670:intron	30.0%
!!	TCTGTTTGGGTTGAATTTAA+TGG	+	chr1.1:35534739-35534758	MS.gene073670:intron	30.0%
!!	TCTTTTTGTTCTTGAGTTGT+AGG	+	chr1.1:35534874-35534893	MS.gene073670:intron	30.0%
!!!	GTTTTGTTTTGGAATGTTTG+CGG	+	chr1.1:35534539-35534558	MS.gene073670:intron	30.0%
!!!	TTTTGTTTTGGAATGTTTGC+GGG	+	chr1.1:35534540-35534559	MS.gene073670:intron	30.0%
	AACTCAAGAACAAAAAGAGC+AGG	-	chr1.1:35534872-35534891	None:intergenic	35.0%
	AAGCATGGACTTACTGTTAA+TGG	+	chr1.1:35535525-35535544	MS.gene073670:intron	35.0%
	AGAGAATTTGACATAGTGAG+TGG	-	chr1.1:35535039-35535058	None:intergenic	35.0%
	AGTAGTCTGGATTATTGTTG+AGG	+	chr1.1:35535766-35535785	MS.gene073670:intron	35.0%
	ATAAAAACAACACACTGCAG+TGG	-	chr1.1:35535896-35535915	None:intergenic	35.0%
	CACACAATCACTTAAAGAAG+TGG	+	chr1.1:35535181-35535200	MS.gene073670:intron	35.0%
	CACACTATCAATTAGAAGTG+TGG	+	chr1.1:35535622-35535641	MS.gene073670:intron	35.0%
	CGAGAGAATGTAAAATGCAA+TGG	-	chr1.1:35535865-35535884	None:intergenic	35.0%
	TCTTGATGTTGAATGTCTTG+CGG	-	chr1.1:35536067-35536086	None:intergenic	35.0%
	TGGAACTATAGTGAACTGAA+TGG	+	chr1.1:35535411-35535430	MS.gene073670:intron	35.0%
	TTGCGGGTCCTAAATTATTA+GGG	+	chr1.1:35534556-35534575	MS.gene073670:intron	35.0%
	TTTGCGGGTCCTAAATTATT+AGG	+	chr1.1:35534555-35534574	MS.gene073670:intron	35.0%
!	TTGTACTATGTCACTTGTCA+AGG	+	chr1.1:35535591-35535610	MS.gene073670:intron	35.0%
!!	TACGCTTTTTGATCTCATCT+TGG	+	chr1.1:35534462-35534481	MS.gene073670:CDS	35.0%
!!!	AGGATTAGGGTTTTTGGTTT+TGG	+	chr1.1:35534651-35534670	MS.gene073670:intron	35.0%
!!!	GGATTAGGGTTTTTGGTTTT+GGG	+	chr1.1:35534652-35534671	MS.gene073670:intron	35.0%
	AAGTTCGTAGGGAAAACCAA+TGG	+	chr1.1:35536114-35536133	MS.gene073670:CDS	40.0%
	AATAGCATATAGCCCAACAG+AGG	-	chr1.1:35534827-35534846	None:intergenic	40.0%
	ACAATTGTTTGTGCCTCTGT+TGG	+	chr1.1:35534811-35534830	MS.gene073670:intron	40.0%
	ACTGTTGCAGACATGATCAA+GGG	+	chr1.1:35536023-35536042	MS.gene073670:CDS	40.0%
	AGTTCGTAGGGAAAACCAAT+GGG	+	chr1.1:35536115-35536134	MS.gene073670:CDS	40.0%
	CAAGAATGATTTCTCACCTG+AGG	+	chr1.1:35536082-35536101	MS.gene073670:CDS	40.0%
	CAATTGTTTGTGCCTCTGTT+GGG	+	chr1.1:35534812-35534831	MS.gene073670:intron	40.0%
	CTTGAATATCAAGAGCTTGC+TGG	+	chr1.1:35535986-35536005	MS.gene073670:CDS	40.0%
!	AAGATCTTGCTGGTAACGTT+GGG	-	chr1.1:35534328-35534347	None:intergenic	40.0%
!	TATGTCACTTGTCAAGGTTC+TGG	+	chr1.1:35535597-35535616	MS.gene073670:intron	40.0%
	AAACTAGCTGCAAGGGATCT+TGG	+	chr1.1:35535477-35535496	MS.gene073670:intron	45.0%
	ACGAGGATGAGCTTAAGTCT+TGG	+	chr1.1:35534410-35534429	MS.gene073670:CDS	45.0%
	CAACGTTACCAGCAAGATCT+TGG	+	chr1.1:35534327-35534346	MS.gene073670:CDS	45.0%
	CGAGGATGAGCTTAAGTCTT+GGG	+	chr1.1:35534411-35534430	MS.gene073670:CDS	45.0%
	CTGATCAACCTTGACGAACT+CGG	-	chr1.1:35534440-35534459	None:intergenic	45.0%
	GACTGTTGCAGACATGATCA+AGG	+	chr1.1:35536022-35536041	MS.gene073670:CDS	45.0%
	GACTTAAGCTCATCCTCGTT+TGG	-	chr1.1:35534409-35534428	None:intergenic	45.0%
	TGATCATGTCTGCAACAGTC+TGG	-	chr1.1:35536022-35536041	None:intergenic	45.0%
	TGATTTCTCACCTGAGGAAG+AGG	+	chr1.1:35536088-35536107	MS.gene073670:CDS	45.0%
	TGCTGAAGACAAACCAAACG+AGG	+	chr1.1:35534393-35534412	MS.gene073670:CDS	45.0%
!	ATCACTCTGAAGAGTTCCGA+CGG	+	chr1.1:35534208-35534227	MS.gene073670:CDS	45.0%
!	CAAGATCTTGCTGGTAACGT+TGG	-	chr1.1:35534329-35534348	None:intergenic	45.0%
!!	ATTATTAATAAATAAAAAAC+AGG	-	chr1.1:35534629-35534648	None:intergenic	5.0%
!!!	TTGTTTTTATTTAATTTAAA+TGG	+	chr1.1:35535906-35535925	MS.gene073670:intron	5.0%
	AATGTCTTGCGGATCTCCTC+TGG	-	chr1.1:35536056-35536075	None:intergenic	50.0%
	AGGAAGAGGAGGAAGTTCGT+AGG	+	chr1.1:35536102-35536121	MS.gene073670:CDS	50.0%
	GATCAAGGGAAAGACACCAG+AGG	+	chr1.1:35536037-35536056	MS.gene073670:CDS	50.0%
	GGAAGAGGAGGAAGTTCGTA+GGG	+	chr1.1:35536103-35536122	MS.gene073670:CDS	50.0%
	TACCAGCAAGATCTTGGCGA+AGG	+	chr1.1:35534333-35534352	MS.gene073670:CDS	50.0%
	TTGGGATTCCGAGTTCGTCA+AGG	+	chr1.1:35534429-35534448	MS.gene073670:CDS	50.0%
	TTTCTCACCTGAGGAAGAGG+AGG	+	chr1.1:35536091-35536110	MS.gene073670:CDS	50.0%
!	CGAGTTCGTCAAGGTTGATC+AGG	+	chr1.1:35534438-35534457	MS.gene073670:CDS	50.0%
!	GAAGATGATTGCGCTGACAG+TGG	+	chr1.1:35534292-35534311	MS.gene073670:CDS	50.0%
!	TGCTGGTAACGTTGGGAAGA+GGG	-	chr1.1:35534321-35534340	None:intergenic	50.0%
!	TTGCTGGTAACGTTGGGAAG+AGG	-	chr1.1:35534322-35534341	None:intergenic	50.0%
	AACCGCTTCATCGACCTCGA+AGG	-	chr1.1:35534239-35534258	None:intergenic	55.0%
	CACCTTCGCCAAGATCTTGC+TGG	-	chr1.1:35534338-35534357	None:intergenic	55.0%
	CATGTCTGCAACAGTCTGGC+AGG	-	chr1.1:35536018-35536037	None:intergenic	55.0%
	CGAACTTCCTCCTCTTCCTC+AGG	-	chr1.1:35536101-35536120	None:intergenic	55.0%
	GACCTTCGAGGTCGATGAAG+CGG	+	chr1.1:35534234-35534253	MS.gene073670:CDS	55.0%
	GGTCGATGAAGCGGTTGCTT+TGG	+	chr1.1:35534243-35534262	MS.gene073670:CDS	55.0%
	GACCTCGAAGGTCTCACCGT+CGG	-	chr1.1:35534227-35534246	None:intergenic	60.0%
	TTCCGACGGTGAGACCTTCG+AGG	+	chr1.1:35534222-35534241	MS.gene073670:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	35534187	35536148	35534187	ID=MS.gene073670
chr1.1	mRNA	35534187	35536148	35534187	ID=MS.gene073670.t1;Parent=MS.gene073670
chr1.1	exon	35534187	35534483	35534187	ID=MS.gene073670.t1.exon1;Parent=MS.gene073670.t1
chr1.1	CDS	35534187	35534483	35534187	ID=cds.MS.gene073670.t1;Parent=MS.gene073670.t1
chr1.1	exon	35535975	35536148	35535975	ID=MS.gene073670.t1.exon2;Parent=MS.gene073670.t1
chr1.1	CDS	35535975	35536148	35535975	ID=cds.MS.gene073670.t1;Parent=MS.gene073670.t1

Gene Sequence

>MS.gene073670

ATGTCTTCAACAACAAGAAAGATCACTCTGAAGAGTTCCGACGGTGAGACCTTCGAGGTCGATGAAGCGGTTGCTTTGGAATCTCAGACGATCAAGCATATGATCGAAGATGATTGCGCTGACAGTGGAATCCCTCTTCCCAACGTTACCAGCAAGATCTTGGCGAAGGTGATTGAGTATTGCAAGAAGCATGTTGACGCTGCTGCTGCTGAAGACAAACCAAACGAGGATGAGCTTAAGTCTTGGGATTCCGAGTTCGTCAAGGTTGATCAGGCTACGCTTTTTGATCTCATCTTGGTAAGTTTTTTTAGGGTTTTAATTATTGTTTGTTTTATCGCTTTATTTGATTTGGGTTTTGTTTTGGAATGTTTGCGGGTCCTAAATTATTAGGGTTTTCTGGTTGGTGTTGAAAAATCTGAATGAATAGTTTATTGGTTTTCCTGTTTTTTATTTATTAATAATAAAGGATTAGGGTTTTTGGTTTTGGGAATTGATTGATGTTTTTGCTTGCTGTAAATTGATCGTTGAAGTTTTTTCAATTTTAATTTGTCTTCTGTTTGGGTTGAATTTAATGGGTTGTCAGTAGTTGTTTGAATTATTGTGATTGTTGTTGATGATGCTGTTACAATTGTTTGTGCCTCTGTTGGGCTATATGCTATTGTTTTGATGTTTTGTTTAATTGCCTGCTCTTTTTGTTCTTGAGTTGTAGGATATTGTTATTTATGGTTGATGCTGCTATGCTATTGTGAAATTATTCAGCGATTTTATGTTTTCATTTGGATTGTTATGTGAGAAACTGTATAGTCAAATCCGAATATCCAAATGATATTCTTATTCTTTTTACATTAACCACTCACTATGTCAAATTCTCTGTTTTGTATGTTTATGTTATGTTTTGTTGGCTTATCTTTTCATTCTGTTGAAATATTCGTCGTGTTTGTTTGGATAACTTGCACAATGCAATGCTATTGTGTTTATTATTCAGTGTTTGTATCACACAATCACTTAAAGAAGTGGTTCTAATGTATTTGATTAAGTGGTTCTAATTTTCAGGCTACGCGTTTACTGAAAATTAAGGACTTGTTTTTAGAAGTTTCTGTTTGATATATCATATTGTTTTCGCTGTGTTTTACGAAACAATTGAAAACAAGTTTTAAGCAAAAATATCATATTTCTTCAATGTTTTATAGAACTTTAGAAATTAGTATGATATCATTGTTTGTATGGAACTATAGTGAACTGAATGGTTCTTTTTAAGACTAAACGGAACATCAATTGATTTATGAAATTAAACTAGCTGCAAGGGATCTTGGTTTTTTTATGAATAAAGAACATATAAAGCATGGACTTACTGTTAATGGACATGTCGTCACCAACAAAATATTGAGACAATGTCATAATTAATTGTACTATGTCACTTGTCAAGGTTCTGGATCACACTATCAATTAGAAGTGTGGTGCTACAACTTCTAGTAAATGTTGTGGGTTTATTCTTTTAAATTTTAGGAGCCCAAATATGGCTGTTTGTTTGTTTGTGTTGCTGAAAATTGTTTTTGGATTCCATTATTAAAAAAACCTAAGTAGTCTGGATTATTGTTGAGGAAATTGAAGTTTGGATTCTGAATAATTTTATAATCAATTTTGTTGTTTCAACTCACAAAAACGTCTCTGACTGCCATTGCATTTTACATTCTCTCGTGTTTTCTCCACTGCAGTGTGTTGTTTTTATTTAATTTAAATGGTTAAGGCTGATTATATATTATTGGTTTGACATTTTTTTCTTTTTAGGCTGCTAATTACTTGAATATCAAGAGCTTGCTGGATCTTACCTGCCAGACTGTTGCAGACATGATCAAGGGAAAGACACCAGAGGAGATCCGCAAGACATTCAACATCAAGAATGATTTCTCACCTGAGGAAGAGGAGGAAGTTCGTAGGGAAAACCAATGGGCATTTGAATGA

Protein sequence

>MS.gene073670.t1

MSSTTRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVDAAAAEDKPNEDELKSWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPEEEEEVRRENQWAFE