Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76635.t1 | XP_003613882.1 | 97.1 | 171 | 5 | 0 | 1 | 171 | 1 | 171 | 5.70E-88 | 334 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76635.t1 | Q99LX5 | 41.0 | 173 | 89 | 5 | 1 | 166 | 1 | 167 | 1.6e-22 | 107.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76635.t1 | G7JWG8 | 97.1 | 171 | 5 | 0 | 1 | 171 | 1 | 171 | 4.1e-88 | 334.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene76635 | 0.803371 | 3.60E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene76635 | 0.804731 | 1.88E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene76635 | 0.82473 | 6.89E-54 | -1.69E-46 |
| MS.gene049680 | MS.gene76635 | 0.81486 | 1.24E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene76635 | 0.834345 | 3.16E-56 | -1.69E-46 |
| MS.gene050085 | MS.gene76635 | 0.809342 | 1.98E-50 | -1.69E-46 |
| MS.gene050317 | MS.gene76635 | 0.813721 | 2.22E-51 | -1.69E-46 |
| MS.gene050386 | MS.gene76635 | 0.800288 | 1.55E-48 | -1.69E-46 |
| MS.gene050437 | MS.gene76635 | 0.808435 | 3.10E-50 | -1.69E-46 |
| MS.gene050571 | MS.gene76635 | 0.805498 | 1.30E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene76635 | 0.830826 | 2.36E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene76635 | 0.852402 | 4.73E-61 | -1.69E-46 |
| MS.gene050689 | MS.gene76635 | 0.821094 | 4.85E-53 | -1.69E-46 |
| MS.gene050737 | MS.gene76635 | 0.808192 | 3.49E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene76635 | 0.86588 | 4.28E-65 | -1.69E-46 |
| MS.gene050838 | MS.gene76635 | 0.814951 | 1.19E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene76635 | 0.860577 | 1.87E-63 | -1.69E-46 |
| MS.gene050955 | MS.gene76635 | 0.851729 | 7.34E-61 | -1.69E-46 |
| MS.gene051003 | MS.gene76635 | 0.906822 | 9.84E-81 | -1.69E-46 |
| MS.gene051184 | MS.gene76635 | 0.808566 | 2.91E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene76635 | 0.816993 | 4.15E-52 | -1.69E-46 |
| MS.gene051243 | MS.gene76635 | 0.801936 | 7.12E-49 | -1.69E-46 |
| MS.gene051245 | MS.gene76635 | 0.802571 | 5.27E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene76635 | 0.818318 | 2.09E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene76635 | 0.845875 | 3.09E-59 | -1.69E-46 |
| MS.gene051452 | MS.gene76635 | 0.811801 | 5.84E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene76635 | 0.807835 | 4.16E-50 | -1.69E-46 |
| MS.gene051676 | MS.gene76635 | 0.804123 | 2.51E-49 | -1.69E-46 |
| MS.gene051831 | MS.gene76635 | 0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene05188 | MS.gene76635 | 0.804449 | 2.15E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene76635 | 0.845903 | 3.04E-59 | -1.69E-46 |
| MS.gene052072 | MS.gene76635 | 0.822982 | 1.77E-53 | -1.69E-46 |
| MS.gene052242 | MS.gene76635 | -0.807726 | 4.39E-50 | -1.69E-46 |
| MS.gene052342 | MS.gene76635 | 0.836998 | 6.74E-57 | -1.69E-46 |
| MS.gene052434 | MS.gene76635 | 0.856252 | 3.65E-62 | -1.69E-46 |
| MS.gene052518 | MS.gene76635 | 0.840991 | 6.23E-58 | -1.69E-46 |
| MS.gene053006 | MS.gene76635 | 0.804093 | 2.55E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene76635 | 0.848826 | 4.78E-60 | -1.69E-46 |
| MS.gene053564 | MS.gene76635 | 0.803736 | 3.02E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene76635 | 0.804822 | 1.80E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene76635 | 0.819991 | 8.68E-53 | -1.69E-46 |
| MS.gene054403 | MS.gene76635 | 0.863828 | 1.88E-64 | -1.69E-46 |
| MS.gene05469 | MS.gene76635 | 0.8297 | 4.44E-55 | -1.69E-46 |
| MS.gene05517 | MS.gene76635 | 0.844971 | 5.43E-59 | -1.69E-46 |
| MS.gene055311 | MS.gene76635 | 0.815997 | 6.94E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene76635 | 0.819264 | 1.27E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene76635 | 0.801474 | 8.85E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene76635 | 0.837601 | 4.72E-57 | -1.69E-46 |
| MS.gene056699 | MS.gene76635 | 0.847797 | 9.21E-60 | -1.69E-46 |
| MS.gene056787 | MS.gene76635 | 0.865453 | 5.84E-65 | -1.69E-46 |
| MS.gene056849 | MS.gene76635 | 0.806065 | 9.86E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene76635 | 0.84798 | 8.20E-60 | -1.69E-46 |
| MS.gene057102 | MS.gene76635 | 0.812617 | 3.87E-51 | -1.69E-46 |
| MS.gene057140 | MS.gene76635 | 0.803602 | 3.22E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene76635 | 0.803258 | 3.80E-49 | -1.69E-46 |
| MS.gene057320 | MS.gene76635 | 0.818823 | 1.60E-52 | -1.69E-46 |
| MS.gene05781 | MS.gene76635 | 0.838147 | 3.42E-57 | -1.69E-46 |
| MS.gene057890 | MS.gene76635 | -0.835608 | 1.52E-56 | -1.69E-46 |
| MS.gene057999 | MS.gene76635 | 0.853698 | 2.01E-61 | -1.69E-46 |
| MS.gene058592 | MS.gene76635 | 0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene058646 | MS.gene76635 | 0.805176 | 1.51E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene76635 | 0.815039 | 1.13E-51 | -1.69E-46 |
| MS.gene058708 | MS.gene76635 | -0.83197 | 1.23E-55 | -1.69E-46 |
| MS.gene059146 | MS.gene76635 | 0.863543 | 2.31E-64 | -1.69E-46 |
| MS.gene059283 | MS.gene76635 | 0.809113 | 2.22E-50 | -1.69E-46 |
| MS.gene059290 | MS.gene76635 | 0.824953 | 6.10E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene76635 | 0.840458 | 8.59E-58 | -1.69E-46 |
| MS.gene06010 | MS.gene76635 | 0.830339 | 3.11E-55 | -1.69E-46 |
| MS.gene06011 | MS.gene76635 | 0.848341 | 6.52E-60 | -1.69E-46 |
| MS.gene060259 | MS.gene76635 | 0.82323 | 1.55E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene76635 | 0.811929 | 5.48E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene76635 | 0.826634 | 2.44E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene76635 | 0.814653 | 1.38E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene76635 | 0.817605 | 3.02E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene76635 | 0.837074 | 6.44E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76635.t1 | MTR_5g042160 | 97.380 | 229 | 6 | 0 | 1 | 229 | 1 | 229 | 3.36e-160 | 442 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76635.t1 | AT3G52220 | 64.384 | 219 | 70 | 5 | 1 | 213 | 1 | 217 | 9.84e-91 | 267 |
Find 57 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCTCCATTTCTTCATTT+TGG | 0.047448 | 5.1:+31801715 | None:intergenic |
| GATTCATCTTCAATCTTTCT+TGG | 0.204880 | 5.1:+31799344 | None:intergenic |
| ATCTTTCTTGGTGATTGATT+AGG | 0.343246 | 5.1:+31799356 | None:intergenic |
| AAAAGAGAAGACGGGAAGAA+AGG | 0.371187 | 5.1:-31799304 | MS.gene76635:CDS |
| CTCTTGCTTTCTTTCCTCAC+GGG | 0.394011 | 5.1:+31799253 | None:intergenic |
| AAAGTCCCAAAATGAAGAAA+TGG | 0.405533 | 5.1:-31801721 | MS.gene76635:CDS |
| TCAAGGCTCCTGTTGGTAGA+TGG | 0.426647 | 5.1:-31803209 | MS.gene76635:CDS |
| AAACACAGAGAGAATTATAT+AGG | 0.430798 | 5.1:-31803240 | MS.gene76635:CDS |
| GAGAAGACGGGAAGAAAGGA+AGG | 0.440522 | 5.1:-31799300 | MS.gene76635:CDS |
| CCTTTCTGCCATCTACCAAC+AGG | 0.451053 | 5.1:+31803201 | None:intergenic |
| TCTCTTGCTTTCTTTCCTCA+CGG | 0.454567 | 5.1:+31799252 | None:intergenic |
| GCTGAAGCAGCAAGGGTTCA+AGG | 0.474043 | 5.1:-31801522 | MS.gene76635:CDS |
| TGTGCAGAGAACTCCGCCCT+TGG | 0.476704 | 5.1:-31799439 | MS.gene76635:intron |
| GCAGCAAGGGTTCAAGGTGT+TGG | 0.487662 | 5.1:-31801516 | MS.gene76635:CDS |
| GGGTCTACAGCAGAAGACTT+AGG | 0.489361 | 5.1:-31801555 | MS.gene76635:CDS |
| GTGCAGAGAACTCCGCCCTT+GGG | 0.491260 | 5.1:-31799438 | MS.gene76635:intron |
| TGGTGTATGCAAGACCTTTG+AGG | 0.493293 | 5.1:+31799403 | None:intergenic |
| AATTAAGGAAGAGGAGGAGC+AGG | 0.497912 | 5.1:-31801673 | MS.gene76635:CDS |
| AGAGGAGGAGCAGGCAATGA+GGG | 0.501735 | 5.1:-31801664 | MS.gene76635:CDS |
| AAAATTCATGTTTATCAAGA+CGG | 0.507020 | 5.1:+31801595 | None:intergenic |
| AGCAAGAGAAGCGTGAGAAA+CGG | 0.508367 | 5.1:-31799238 | MS.gene76635:CDS |
| TGAGGACGACTAGCACGCTT+AGG | 0.512346 | 5.1:+31801624 | None:intergenic |
| CCAACTCGAGGTGGCGTCCG+TGG | 0.525837 | 5.1:-31803597 | MS.gene76635:CDS |
| TGCAAGACCTTTGAGGAACC+AGG | 0.527049 | 5.1:+31799410 | None:intergenic |
| AGAAAGATAAAGAGAGGAGG+AGG | 0.528808 | 5.1:-31799181 | MS.gene76635:CDS |
| TTAATGGAACAGAGTTCACT+TGG | 0.542444 | 5.1:-31803281 | MS.gene76635:intron |
| CTCCGCCCTTGGGAAGAACC+TGG | 0.543845 | 5.1:-31799428 | MS.gene76635:CDS |
| GAGGAACCAGGTTCTTCCCA+AGG | 0.547002 | 5.1:+31799422 | None:intergenic |
| AAAGATTGAAGATGAATCTG+AGG | 0.564195 | 5.1:-31799339 | MS.gene76635:CDS |
| AATGAGGGAAGCTCTCGGCT+TGG | 0.564929 | 5.1:-31801649 | MS.gene76635:CDS |
| GACACAAGAAAGATAAAGAG+AGG | 0.577049 | 5.1:-31799187 | MS.gene76635:CDS |
| AAGAGGAGGAGCAGGCAATG+AGG | 0.579166 | 5.1:-31801665 | MS.gene76635:CDS |
| CCACGGACGCCACCTCGAGT+TGG | 0.580213 | 5.1:+31803597 | None:intergenic |
| ATTCTCGTGATTCAGATGAC+AGG | 0.582090 | 5.1:-31799214 | MS.gene76635:CDS |
| TTTCAGAACTAGTAAAGAGA+GGG | 0.582339 | 5.1:-31801575 | MS.gene76635:CDS |
| GGAAGAACCTGGTTCCTCAA+AGG | 0.584885 | 5.1:-31799417 | MS.gene76635:CDS |
| AGGAACCAGGTTCTTCCCAA+GGG | 0.588462 | 5.1:+31799423 | None:intergenic |
| CCTGTTGGTAGATGGCAGAA+AGG | 0.593241 | 5.1:-31803201 | MS.gene76635:intron |
| GTCCCAAAATGAAGAAATGG+AGG | 0.596320 | 5.1:-31801718 | MS.gene76635:CDS |
| AAGGTCACGCTGAAGCAGCA+AGG | 0.608440 | 5.1:-31801530 | MS.gene76635:CDS |
| CATAGTCTCAAGGCTCCTGT+TGG | 0.611584 | 5.1:-31803216 | MS.gene76635:CDS |
| TTATATAGGTCATAGTCTCA+AGG | 0.617267 | 5.1:-31803226 | MS.gene76635:CDS |
| ACTCGAGGTGGCGTCCGTGG+CGG | 0.620619 | 5.1:-31803594 | MS.gene76635:CDS |
| AGGTCACGCTGAAGCAGCAA+GGG | 0.623464 | 5.1:-31801529 | MS.gene76635:CDS |
| ACTTACGATCTCGACCGCCA+CGG | 0.627738 | 5.1:+31803580 | None:intergenic |
| AAGCGTGCTAGTCGTCCTCA+AGG | 0.629339 | 5.1:-31801621 | MS.gene76635:CDS |
| CAGGCAATGAGGGAAGCTCT+CGG | 0.634387 | 5.1:-31801654 | MS.gene76635:CDS |
| AACCAGGTTCTTCCCAAGGG+CGG | 0.636510 | 5.1:+31799426 | None:intergenic |
| TTATCAAGACGGTTACCTTG+AGG | 0.642277 | 5.1:+31801606 | None:intergenic |
| GGTCTTGCATACACCAGCTG+AGG | 0.643578 | 5.1:-31799396 | MS.gene76635:CDS |
| TAATGGAACAGAGTTCACTT+GGG | 0.649042 | 5.1:-31803280 | MS.gene76635:intron |
| ACAGCAGAAGACTTAGGTGA+AGG | 0.653024 | 5.1:-31801549 | MS.gene76635:CDS |
| AGGAAGAGAAACGTGAAAAG+CGG | 0.661820 | 5.1:-31799280 | MS.gene76635:CDS |
| ACAAGAAAGATAAAGAGAGG+AGG | 0.663634 | 5.1:-31799184 | MS.gene76635:CDS |
| ATGTATCATCCAACTCGAGG+TGG | 0.688754 | 5.1:-31803606 | MS.gene76635:CDS |
| TGAAAAGCGGCATTCCCGTG+AGG | 0.706921 | 5.1:-31799267 | MS.gene76635:CDS |
| AACATGTATCATCCAACTCG+AGG | 0.712342 | 5.1:-31803609 | MS.gene76635:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTCCTTATTTAATT+AGG | - | chr5.1:31801798-31801817 | MS.gene76635:intron | 10.0% |
| !!! | TAAGAAAATTTAATTTTAAG+AGG | + | chr5.1:31801755-31801774 | None:intergenic | 10.0% |
| !! | AAAAATAAAACAAATGAAAC+AGG | + | chr5.1:31801367-31801386 | None:intergenic | 15.0% |
| !! | AATTAAACAAAATAGGAATT+AGG | + | chr5.1:31799309-31799328 | None:intergenic | 15.0% |
| !! | AATTTGAAAAAGAGAAAAAT+TGG | + | chr5.1:31799245-31799264 | None:intergenic | 15.0% |
| !! | AGGATATCATATAAATTATT+TGG | - | chr5.1:31801387-31801406 | MS.gene76635:intron | 15.0% |
| !! | ATAAAAAGACAATTTAAAGA+TGG | + | chr5.1:31800993-31801012 | None:intergenic | 15.0% |
| !! | CAATTATTTAATATAGAAGT+TGG | - | chr5.1:31803040-31803059 | MS.gene76635:intron | 15.0% |
| !! | CATTAAATAACTAATGTATT+TGG | + | chr5.1:31800137-31800156 | None:intergenic | 15.0% |
| !! | TGAATTAAAAGGTTTAAATT+TGG | + | chr5.1:31800545-31800564 | None:intergenic | 15.0% |
| !!! | AAAACTGTTATTTCTATTAA+AGG | + | chr5.1:31802635-31802654 | None:intergenic | 15.0% |
| !!! | ATAAATCTTTTAAAAGAATC+AGG | + | chr5.1:31802074-31802093 | None:intergenic | 15.0% |
| !!! | GTTTCATTTGTTTTATTTTT+AGG | - | chr5.1:31801367-31801386 | MS.gene76635:intron | 15.0% |
| !!! | GTTTTGTATTGATATAAATA+AGG | - | chr5.1:31801828-31801847 | MS.gene76635:intron | 15.0% |
| !!! | TTATATTTAGATTTTTCTCA+TGG | - | chr5.1:31802043-31802062 | MS.gene76635:intron | 15.0% |
| !!! | TTATATTTAGGTTTTTTTCA+TGG | - | chr5.1:31801481-31801500 | MS.gene76635:intron | 15.0% |
| !!! | TTTTTCAGAAACAAAATTTT+AGG | - | chr5.1:31802486-31802505 | MS.gene76635:intron | 15.0% |
| !! | AAAATTCATGTTTATCAAGA+CGG | + | chr5.1:31801180-31801199 | None:intergenic | 20.0% |
| !! | AATAAGTTACAATAATAGCA+CGG | + | chr5.1:31803304-31803323 | None:intergenic | 20.0% |
| !! | AATTGAAATTGAAATTGAGA+TGG | + | chr5.1:31799222-31799241 | None:intergenic | 20.0% |
| !! | AGAAGAGATAAAAAGAATTA+AGG | - | chr5.1:31801084-31801103 | MS.gene76635:intron | 20.0% |
| !! | CAAATCATAAATAAACAAAG+TGG | + | chr5.1:31802435-31802454 | None:intergenic | 20.0% |
| !! | CTCTAAATCCTAATTAAATA+AGG | + | chr5.1:31801809-31801828 | None:intergenic | 20.0% |
| !! | GTGGTAAAATTAAACAAAAT+AGG | + | chr5.1:31799316-31799335 | None:intergenic | 20.0% |
| !! | TAAAATTTAAGAAGCTAGAA+AGG | - | chr5.1:31800830-31800849 | MS.gene76635:intron | 20.0% |
| !! | TATCTAAACTTACATTACAT+TGG | + | chr5.1:31800792-31800811 | None:intergenic | 20.0% |
| !! | TCTTCAAATTAAGGTTAATT+GGG | + | chr5.1:31799960-31799979 | None:intergenic | 20.0% |
| !! | TTCGCCATATAATAAATAAA+GGG | + | chr5.1:31802682-31802701 | None:intergenic | 20.0% |
| !! | TTGAAAAAAAAAGCTGATTA+GGG | + | chr5.1:31802524-31802543 | None:intergenic | 20.0% |
| !! | TTTCGCCATATAATAAATAA+AGG | + | chr5.1:31802683-31802702 | None:intergenic | 20.0% |
| !!! | AAAACAACTTTTTAGATTCA+TGG | - | chr5.1:31800080-31800099 | MS.gene76635:intron | 20.0% |
| !!! | AAATTGTCTTTTTATTCAAC+AGG | - | chr5.1:31800998-31801017 | MS.gene76635:intron | 20.0% |
| !!! | AATAAAGCTCTAAAAATCAT+TGG | + | chr5.1:31801520-31801539 | None:intergenic | 20.0% |
| !!! | AATTGTCTTTTTATTCAACA+GGG | - | chr5.1:31800999-31801018 | MS.gene76635:intron | 20.0% |
| !!! | CACTTTGTTTATTTATGATT+TGG | - | chr5.1:31802433-31802452 | MS.gene76635:intron | 20.0% |
| !!! | GAGTTCTAAAATTGTAAATA+TGG | + | chr5.1:31801906-31801925 | None:intergenic | 20.0% |
| !!! | TAAAAAGCATAAGGAAATTT+CGG | + | chr5.1:31800287-31800306 | None:intergenic | 20.0% |
| !!! | TATTGTTTATAGTCTTGTAT+AGG | - | chr5.1:31800337-31800356 | MS.gene76635:intron | 20.0% |
| !!! | TGTAAGAATGAATAATTTTG+TGG | + | chr5.1:31799352-31799371 | None:intergenic | 20.0% |
| !!! | TTCTTATTTCTTTGTTATGA+TGG | - | chr5.1:31801769-31801788 | MS.gene76635:intron | 20.0% |
| ! | AAAATCTTGAATAAGCTGTT+AGG | + | chr5.1:31801600-31801619 | None:intergenic | 25.0% |
| ! | AAACACAGAGAGAATTATAT+AGG | - | chr5.1:31799532-31799551 | MS.gene76635:intron | 25.0% |
| ! | AAAGTAGAAAAAAGAGAAGA+CGG | - | chr5.1:31803459-31803478 | MS.gene76635:intron | 25.0% |
| ! | AATTGTAATCATGCAATTCT+TGG | + | chr5.1:31801638-31801657 | None:intergenic | 25.0% |
| ! | AGAGTAGATATCCAAAAAAT+GGG | + | chr5.1:31802318-31802337 | None:intergenic | 25.0% |
| ! | AGATATGCAATTTAGTACAA+AGG | - | chr5.1:31799701-31799720 | MS.gene76635:intron | 25.0% |
| ! | AGTAAAAGCTTAGAAATTAC+AGG | + | chr5.1:31802399-31802418 | None:intergenic | 25.0% |
| ! | AGTAAATTGGCTGTTTAAAT+AGG | - | chr5.1:31800442-31800461 | MS.gene76635:intron | 25.0% |
| ! | ATAAACATTAGACTGTTGTT+TGG | - | chr5.1:31800945-31800964 | MS.gene76635:intron | 25.0% |
| ! | ATATAACTTTCCTATACCTA+AGG | + | chr5.1:31802920-31802939 | None:intergenic | 25.0% |
| ! | ATTCAATCAAAACTGTTGAT+CGG | - | chr5.1:31800406-31800425 | MS.gene76635:intron | 25.0% |
| ! | CATGGAATAATTAATGTATC+TGG | - | chr5.1:31800098-31800117 | MS.gene76635:intron | 25.0% |
| ! | CTTCAAATTAAGGTTAATTG+GGG | + | chr5.1:31799959-31799978 | None:intergenic | 25.0% |
| ! | CTTGAAAAAAAAAGCTGATT+AGG | + | chr5.1:31802525-31802544 | None:intergenic | 25.0% |
| ! | GAGTCTGATGTATTATATTT+AGG | - | chr5.1:31801469-31801488 | MS.gene76635:intron | 25.0% |
| ! | GATAAAAAGAATTAAGGAAG+AGG | - | chr5.1:31801090-31801109 | MS.gene76635:intron | 25.0% |
| ! | GATATGCAATTTAGTACAAA+GGG | - | chr5.1:31799702-31799721 | MS.gene76635:intron | 25.0% |
| ! | GTCTTCAAATTAAGGTTAAT+TGG | + | chr5.1:31799961-31799980 | None:intergenic | 25.0% |
| ! | TAAACTTACATTACATTGGA+TGG | + | chr5.1:31800788-31800807 | None:intergenic | 25.0% |
| ! | TAACATATGAATGCTTAGTT+TGG | - | chr5.1:31803016-31803035 | MS.gene76635:intron | 25.0% |
| ! | TAGAGTAGATATCCAAAAAA+TGG | + | chr5.1:31802319-31802338 | None:intergenic | 25.0% |
| !! | ATAGCTGTTTGTTAAAATTC+TGG | + | chr5.1:31799674-31799693 | None:intergenic | 25.0% |
| !! | GAAATAACAGTTTTTGTAGA+AGG | - | chr5.1:31802641-31802660 | MS.gene76635:intron | 25.0% |
| !! | GAAGAAAAGTAAAAAGCATA+AGG | + | chr5.1:31800296-31800315 | None:intergenic | 25.0% |
| !! | GAATAATTTTGTGGAAATCA+GGG | + | chr5.1:31799343-31799362 | None:intergenic | 25.0% |
| !! | TGAATAATTTTGTGGAAATC+AGG | + | chr5.1:31799344-31799363 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | + | chr5.1:31800063-31800082 | None:intergenic | 25.0% |
| !!! | AGCAAATTCTTTTAGCTTAT+AGG | - | chr5.1:31801544-31801563 | MS.gene76635:CDS | 25.0% |
| !!! | CTTTTAATTCAAAGCTCATA+GGG | - | chr5.1:31800554-31800573 | MS.gene76635:intron | 25.0% |
| !!! | CTTTTTACTTTTCTTCAACA+TGG | - | chr5.1:31800300-31800319 | MS.gene76635:intron | 25.0% |
| !!! | TATTTATGATTTGGTAGAAC+AGG | - | chr5.1:31802442-31802461 | MS.gene76635:intron | 25.0% |
| !!! | TCATTTTGGTTTTATGGTTT+AGG | - | chr5.1:31800660-31800679 | MS.gene76635:intron | 25.0% |
| !!! | TGTTAGGTCTTTTATTTACT+GGG | + | chr5.1:31801584-31801603 | None:intergenic | 25.0% |
| !!! | TTTTAATTCAAAGCTCATAG+GGG | - | chr5.1:31800555-31800574 | MS.gene76635:intron | 25.0% |
| !!! | TTTTCGTCATTTTGGTTTTA+TGG | - | chr5.1:31800654-31800673 | MS.gene76635:intron | 25.0% |
| AAAAAGAATTAAGGAAGAGG+AGG | - | chr5.1:31801093-31801112 | MS.gene76635:intron | 30.0% | |
| AAACACACTGTTGAAGTTTA+GGG | + | chr5.1:31801962-31801981 | None:intergenic | 30.0% | |
| AAAGATTGAAGATGAATCTG+AGG | - | chr5.1:31803433-31803452 | MS.gene76635:intron | 30.0% | |
| AAAGTCCCAAAATGAAGAAA+TGG | - | chr5.1:31801051-31801070 | MS.gene76635:intron | 30.0% | |
| AAGTAGAAAAAAGAGAAGAC+GGG | - | chr5.1:31803460-31803479 | MS.gene76635:intron | 30.0% | |
| ACATCTATTATTTGGAAGAC+TGG | - | chr5.1:31802718-31802737 | MS.gene76635:intron | 30.0% | |
| ACTTATTTGTGCATCTTTGA+AGG | + | chr5.1:31801689-31801708 | None:intergenic | 30.0% | |
| AGTCTTCCAAATAATAGATG+TGG | + | chr5.1:31802719-31802738 | None:intergenic | 30.0% | |
| CCAATCATATACAATGCAAA+AGG | + | chr5.1:31800220-31800239 | None:intergenic | 30.0% | |
| CGCTATTTGACATGAATTAA+AGG | + | chr5.1:31799632-31799651 | None:intergenic | 30.0% | |
| GATTCATCTTCAATCTTTCT+TGG | + | chr5.1:31803431-31803450 | None:intergenic | 30.0% | |
| GGCTATTCACATCTAAATAA+GGG | - | chr5.1:31800966-31800985 | MS.gene76635:intron | 30.0% | |
| GGTATAAAGATGGAAAAGAA+AGG | + | chr5.1:31802798-31802817 | None:intergenic | 30.0% | |
| TAGACCAGCTTAACAAATAA+GGG | + | chr5.1:31802960-31802979 | None:intergenic | 30.0% | |
| TAGTCACATCATATAGTCTT+CGG | + | chr5.1:31799807-31799826 | None:intergenic | 30.0% | |
| TCAGTCTTTGCTTAGTAAAT+TGG | - | chr5.1:31800429-31800448 | MS.gene76635:intron | 30.0% | |
| TGAATTAAAGGAGTAAGGTA+AGG | + | chr5.1:31799620-31799639 | None:intergenic | 30.0% | |
| TGACATGAATTAAAGGAGTA+AGG | + | chr5.1:31799625-31799644 | None:intergenic | 30.0% | |
| TGGCTATTCACATCTAAATA+AGG | - | chr5.1:31800965-31800984 | MS.gene76635:intron | 30.0% | |
| TTAGACCAGCTTAACAAATA+AGG | + | chr5.1:31802961-31802980 | None:intergenic | 30.0% | |
| TTATATAGGTCATAGTCTCA+AGG | - | chr5.1:31799546-31799565 | MS.gene76635:intron | 30.0% | |
| TTTCAGAACTAGTAAAGAGA+GGG | - | chr5.1:31801197-31801216 | MS.gene76635:intron | 30.0% | |
| TTTGTTAGCAATATCGTTTG+CGG | - | chr5.1:31799898-31799917 | MS.gene76635:intron | 30.0% | |
| ! | AAGATCTGAAGTTTCTTCTA+CGG | - | chr5.1:31800494-31800513 | MS.gene76635:intron | 30.0% |
| ! | ACATTAGCTTGGTATAAAGA+TGG | + | chr5.1:31802808-31802827 | None:intergenic | 30.0% |
| ! | AGTTTGTGTCATTCTAACTT+TGG | - | chr5.1:31803083-31803102 | MS.gene76635:intron | 30.0% |
| ! | ATATCCCTTATTTGTTAAGC+TGG | - | chr5.1:31802953-31802972 | MS.gene76635:intron | 30.0% |
| ! | ATCTTTCTTGGTGATTGATT+AGG | + | chr5.1:31803419-31803438 | None:intergenic | 30.0% |
| ! | CCTTTTGCATTGTATATGAT+TGG | - | chr5.1:31800217-31800236 | MS.gene76635:intron | 30.0% |
| ! | CTGGCCCTTTATTTATTATA+TGG | - | chr5.1:31802675-31802694 | MS.gene76635:intron | 30.0% |
| ! | GATCTAAGGTCTTCAAATTA+AGG | + | chr5.1:31799969-31799988 | None:intergenic | 30.0% |
| ! | TAGTTTAACTTCGTAAGCAA+AGG | + | chr5.1:31803247-31803266 | None:intergenic | 30.0% |
| ! | TTTTCAGAACTAGTAAAGAG+AGG | - | chr5.1:31801196-31801215 | MS.gene76635:intron | 30.0% |
| !! | AGACTTGTTGTATTGACAAT+AGG | - | chr5.1:31799746-31799765 | MS.gene76635:intron | 30.0% |
| !! | CCTATGAGCTTTGAATTAAA+AGG | + | chr5.1:31800556-31800575 | None:intergenic | 30.0% |
| !! | CCTTTTAATTCAAAGCTCAT+AGG | - | chr5.1:31800553-31800572 | MS.gene76635:intron | 30.0% |
| !! | CTGTTAGGTCTTTTATTTAC+TGG | + | chr5.1:31801585-31801604 | None:intergenic | 30.0% |
| !! | TTAAATTTGGCTCTAGACTT+GGG | + | chr5.1:31800532-31800551 | None:intergenic | 30.0% |
| !! | TTTAAATTTGGCTCTAGACT+TGG | + | chr5.1:31800533-31800552 | None:intergenic | 30.0% |
| !!! | CAGCTTTATTTTCGTCATTT+TGG | - | chr5.1:31800646-31800665 | MS.gene76635:intron | 30.0% |
| !!! | GCAGTTGCATTTTGAAATAA+TGG | - | chr5.1:31803105-31803124 | MS.gene76635:intron | 30.0% |
| !!! | TGGTTTTATGGTTTAGGTTA+TGG | - | chr5.1:31800666-31800685 | MS.gene76635:intron | 30.0% |
| AACACCGAAACTACTTAACA+TGG | - | chr5.1:31802979-31802998 | MS.gene76635:intron | 35.0% | |
| AACATTGTGAAATCACCCTA+GGG | - | chr5.1:31802894-31802913 | MS.gene76635:intron | 35.0% | |
| AATGACACAAACTTGAAGAG+TGG | + | chr5.1:31803076-31803095 | None:intergenic | 35.0% | |
| ACAAGAAAGATAAAGAGAGG+AGG | - | chr5.1:31803588-31803607 | MS.gene76635:CDS | 35.0% | |
| ACACCGAAACTACTTAACAT+GGG | - | chr5.1:31802980-31802999 | MS.gene76635:intron | 35.0% | |
| ACGATACAGACATAAAACAG+AGG | - | chr5.1:31799864-31799883 | MS.gene76635:intron | 35.0% | |
| ACTATATGATGTGACTAGGT+AGG | - | chr5.1:31799810-31799829 | MS.gene76635:intron | 35.0% | |
| AGAAAACAGTCTAGTAAGTG+GGG | - | chr5.1:31802188-31802207 | MS.gene76635:intron | 35.0% | |
| ATGACACAAACTTGAAGAGT+GGG | + | chr5.1:31803075-31803094 | None:intergenic | 35.0% | |
| CAAACACACTGTTGAAGTTT+AGG | + | chr5.1:31801963-31801982 | None:intergenic | 35.0% | |
| CAACCCATGTTAAGTAGTTT+CGG | + | chr5.1:31802986-31803005 | None:intergenic | 35.0% | |
| CAATAATAGCACGGAATTTC+TGG | + | chr5.1:31803295-31803314 | None:intergenic | 35.0% | |
| CACTAACATAGACATTAGCT+TGG | + | chr5.1:31802819-31802838 | None:intergenic | 35.0% | |
| CAGAAAACAGTCTAGTAAGT+GGG | - | chr5.1:31802187-31802206 | MS.gene76635:intron | 35.0% | |
| GAAGACTATATGATGTGACT+AGG | - | chr5.1:31799806-31799825 | MS.gene76635:intron | 35.0% | |
| GAATGAGATGGAATTGAAGA+AGG | + | chr5.1:31799277-31799296 | None:intergenic | 35.0% | |
| GACACAAGAAAGATAAAGAG+AGG | - | chr5.1:31803585-31803604 | MS.gene76635:intron | 35.0% | |
| GCTTCAACAAATCTGAACTT+TGG | + | chr5.1:31802156-31802175 | None:intergenic | 35.0% | |
| GTTGTGTTTCTCACTCTTAA+TGG | - | chr5.1:31799475-31799494 | MS.gene76635:intron | 35.0% | |
| TAACATTGTGAAATCACCCT+AGG | - | chr5.1:31802893-31802912 | MS.gene76635:intron | 35.0% | |
| TAATGGAACAGAGTTCACTT+GGG | - | chr5.1:31799492-31799511 | MS.gene76635:intron | 35.0% | |
| TATTTGGATGAAGAACAGCT+GGG | - | chr5.1:31801403-31801422 | MS.gene76635:intron | 35.0% | |
| TCCAAATAATAGATGTGGAG+TGG | + | chr5.1:31802714-31802733 | None:intergenic | 35.0% | |
| TCCACTCCACATCTATTATT+TGG | - | chr5.1:31802710-31802729 | MS.gene76635:intron | 35.0% | |
| TCTCCTAGGTTGCTTATAAA+GGG | - | chr5.1:31800905-31800924 | MS.gene76635:intron | 35.0% | |
| TGCTTATAAATGTGACCAGA+GGG | - | chr5.1:31800175-31800194 | MS.gene76635:intron | 35.0% | |
| TGGAAAACAAACACAAGAGA+TGG | + | chr5.1:31803275-31803294 | None:intergenic | 35.0% | |
| TTAAGGAGAAACTTAGGTGA+TGG | + | chr5.1:31800590-31800609 | None:intergenic | 35.0% | |
| TTAATGGAACAGAGTTCACT+TGG | - | chr5.1:31799491-31799510 | MS.gene76635:intron | 35.0% | |
| TTACTAGTGGTTTCAATGGA+GGG | - | chr5.1:31802839-31802858 | MS.gene76635:intron | 35.0% | |
| TTATTTGGATGAAGAACAGC+TGG | - | chr5.1:31801402-31801421 | MS.gene76635:intron | 35.0% | |
| TTCTCCTAGGTTGCTTATAA+AGG | - | chr5.1:31800904-31800923 | MS.gene76635:intron | 35.0% | |
| TTGCTTATAAATGTGACCAG+AGG | - | chr5.1:31800174-31800193 | MS.gene76635:intron | 35.0% | |
| TTTATAAGCAACCTAGGAGA+AGG | + | chr5.1:31800905-31800924 | None:intergenic | 35.0% | |
| ! | AAGATACCCATTTTCAGTCA+AGG | - | chr5.1:31802229-31802248 | MS.gene76635:intron | 35.0% |
| ! | AGATACCCATTTTCAGTCAA+GGG | - | chr5.1:31802230-31802249 | MS.gene76635:intron | 35.0% |
| ! | AGCCTCCATTTCTTCATTTT+GGG | + | chr5.1:31801059-31801078 | None:intergenic | 35.0% |
| ! | AGGAGAAAGTATGAATGAGA+TGG | + | chr5.1:31799289-31799308 | None:intergenic | 35.0% |
| ! | AGTGTTACTAGTGGTTTCAA+TGG | - | chr5.1:31802835-31802854 | MS.gene76635:intron | 35.0% |
| ! | GTCTATGTTAGTGTTACTAG+TGG | - | chr5.1:31802826-31802845 | MS.gene76635:intron | 35.0% |
| ! | TTTGTGCATCTTTGAAGGAA+AGG | + | chr5.1:31801684-31801703 | None:intergenic | 35.0% |
| !! | AGATTTGTTGAAGCATGAGA+TGG | - | chr5.1:31802162-31802181 | MS.gene76635:intron | 35.0% |
| !! | CTTTTATTTACTGGGCTGTT+GGG | + | chr5.1:31801576-31801595 | None:intergenic | 35.0% |
| !! | TCTTTTATTTACTGGGCTGT+TGG | + | chr5.1:31801577-31801596 | None:intergenic | 35.0% |
| !!! | AAGACCTTTTTTGGTATACC+CGG | - | chr5.1:31801023-31801042 | MS.gene76635:intron | 35.0% |
| !!! | ATTTTGGGACTTTTTATCCC+GGG | + | chr5.1:31801044-31801063 | None:intergenic | 35.0% |
| !!! | CATTTTGGGACTTTTTATCC+CGG | + | chr5.1:31801045-31801064 | None:intergenic | 35.0% |
| AAAAGAGAAGACGGGAAGAA+AGG | - | chr5.1:31803468-31803487 | MS.gene76635:intron | 40.0% | |
| ACATAAAACAGAGGCTCTTG+GGG | - | chr5.1:31799873-31799892 | MS.gene76635:intron | 40.0% | |
| ACTGCATATGCTATGTTGGT+TGG | - | chr5.1:31800728-31800747 | MS.gene76635:intron | 40.0% | |
| AGAAAGATAAAGAGAGGAGG+AGG | - | chr5.1:31803591-31803610 | MS.gene76635:CDS | 40.0% | |
| AGAAGCTAGAAAGGTTGAAG+AGG | - | chr5.1:31800839-31800858 | MS.gene76635:intron | 40.0% | |
| AGACATAAAACAGAGGCTCT+TGG | - | chr5.1:31799871-31799890 | MS.gene76635:intron | 40.0% | |
| AGGAAGAGAAACGTGAAAAG+CGG | - | chr5.1:31803492-31803511 | MS.gene76635:intron | 40.0% | |
| AGGTTGCTTATAAAGGGTAG+AGG | - | chr5.1:31800911-31800930 | MS.gene76635:intron | 40.0% | |
| ATGTGACTAGGTAGGACATT+AGG | - | chr5.1:31799818-31799837 | MS.gene76635:intron | 40.0% | |
| ATTCTCGTGATTCAGATGAC+AGG | - | chr5.1:31803558-31803577 | MS.gene76635:intron | 40.0% | |
| CCAAAAAATGGGTCTGAACA+TGG | + | chr5.1:31802307-31802326 | None:intergenic | 40.0% | |
| CCAGAAAACAGTCTAGTAAG+TGG | - | chr5.1:31802186-31802205 | MS.gene76635:intron | 40.0% | |
| CTACCCTTTATAAGCAACCT+AGG | + | chr5.1:31800911-31800930 | None:intergenic | 40.0% | |
| CTTAGATCACACTCTTCAAG+TGG | - | chr5.1:31799981-31800000 | MS.gene76635:intron | 40.0% | |
| GAAGCTAGAAAGGTTGAAGA+GGG | - | chr5.1:31800840-31800859 | MS.gene76635:intron | 40.0% | |
| GACATAAAACAGAGGCTCTT+GGG | - | chr5.1:31799872-31799891 | MS.gene76635:intron | 40.0% | |
| GGTTGCTTATAAAGGGTAGA+GGG | - | chr5.1:31800912-31800931 | MS.gene76635:intron | 40.0% | |
| GTCCCAAAATGAAGAAATGG+AGG | - | chr5.1:31801054-31801073 | MS.gene76635:intron | 40.0% | |
| GTTAAAATTCTGGTGCACGA+TGG | + | chr5.1:31799664-31799683 | None:intergenic | 40.0% | |
| GTTACTAGTGGTTTCAATGG+AGG | - | chr5.1:31802838-31802857 | MS.gene76635:intron | 40.0% | |
| GTTTGCTTCTGGTCACATTT+AGG | - | chr5.1:31801978-31801997 | MS.gene76635:intron | 40.0% | |
| TACAAATGTAGCCTGAGGAT+AGG | + | chr5.1:31800626-31800645 | None:intergenic | 40.0% | |
| TACTAGTGGTTTCAATGGAG+GGG | - | chr5.1:31802840-31802859 | MS.gene76635:intron | 40.0% | |
| TAGGATAAAGTGCAGGCTTA+AGG | + | chr5.1:31800607-31800626 | None:intergenic | 40.0% | |
| TATCCCGGGTATACCAAAAA+AGG | + | chr5.1:31801030-31801049 | None:intergenic | 40.0% | |
| TCTCTTGCTTTCTTTCCTCA+CGG | + | chr5.1:31803523-31803542 | None:intergenic | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | + | chr5.1:31800059-31800078 | None:intergenic | 40.0% | |
| TGGTACCCTTGACTGAAAAT+GGG | + | chr5.1:31802238-31802257 | None:intergenic | 40.0% | |
| TGTGACTAGGTAGGACATTA+GGG | - | chr5.1:31799819-31799838 | MS.gene76635:intron | 40.0% | |
| TTATCAAGACGGTTACCTTG+AGG | + | chr5.1:31801169-31801188 | None:intergenic | 40.0% | |
| TTCAACAGTGTGTTTGCTTC+TGG | - | chr5.1:31801967-31801986 | MS.gene76635:intron | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | + | chr5.1:31800060-31800079 | None:intergenic | 40.0% | |
| ! | AAGCACTGCATATGCTATGT+TGG | - | chr5.1:31800724-31800743 | MS.gene76635:intron | 40.0% |
| ! | CACTTGAAGAGTGTGATCTA+AGG | + | chr5.1:31799983-31800002 | None:intergenic | 40.0% |
| ! | CAGCCTCCATTTCTTCATTT+TGG | + | chr5.1:31801060-31801079 | None:intergenic | 40.0% |
| ! | CCACTTACTAGACTGTTTTC+TGG | + | chr5.1:31802189-31802208 | None:intergenic | 40.0% |
| ! | GATACATTTTCTACCTCAGC+TGG | + | chr5.1:31803392-31803411 | None:intergenic | 40.0% |
| ! | GTTTAGGGTGTTAGATAGAG+AGG | + | chr5.1:31801947-31801966 | None:intergenic | 40.0% |
| !! | CTACTTAACATGGGTTGATG+TGG | - | chr5.1:31802989-31803008 | MS.gene76635:intron | 40.0% |
| !!! | AGACCTTTTTTGGTATACCC+GGG | - | chr5.1:31801024-31801043 | MS.gene76635:intron | 40.0% |
| !!! | CAACAGGGAAAGACCTTTTT+TGG | - | chr5.1:31801014-31801033 | MS.gene76635:intron | 40.0% |
| !!! | CCATGTTCAGACCCATTTTT+TGG | - | chr5.1:31802304-31802323 | MS.gene76635:intron | 40.0% |
| !!! | TTCAAGGTGTTGGTTTTGCA+AGG | - | chr5.1:31801266-31801285 | MS.gene76635:intron | 40.0% |
| AATTAAGGAAGAGGAGGAGC+AGG | - | chr5.1:31801099-31801118 | MS.gene76635:intron | 45.0% | |
| ACAGCAGAAGACTTAGGTGA+AGG | - | chr5.1:31801223-31801242 | MS.gene76635:intron | 45.0% | |
| AGCTGTACAAATGTAGCCTG+AGG | + | chr5.1:31800631-31800650 | None:intergenic | 45.0% | |
| AGGGAGTTTATGCAAGCTGA+AGG | - | chr5.1:31800194-31800213 | MS.gene76635:intron | 45.0% | |
| AGTTACCCGAACACTTTGGT+GGG | + | chr5.1:31802278-31802297 | None:intergenic | 45.0% | |
| ATGTATCATCCAACTCGAGG+TGG | - | chr5.1:31799166-31799185 | MS.gene76635:CDS | 45.0% | |
| CTCTTGCTTTCTTTCCTCAC+GGG | + | chr5.1:31803522-31803541 | None:intergenic | 45.0% | |
| CTGAGGATAGGATAAAGTGC+AGG | + | chr5.1:31800614-31800633 | None:intergenic | 45.0% | |
| CTGCACTTTATCCTATCCTC+AGG | - | chr5.1:31800612-31800631 | MS.gene76635:intron | 45.0% | |
| GCAGGCTTAAGGAGAAACTT+AGG | + | chr5.1:31800596-31800615 | None:intergenic | 45.0% | |
| GTAGAAGGATCACAACAAGC+TGG | - | chr5.1:31802656-31802675 | MS.gene76635:intron | 45.0% | |
| GTGGTACCCTTGACTGAAAA+TGG | + | chr5.1:31802239-31802258 | None:intergenic | 45.0% | |
| GTGTAGTTACCCGAACACTT+TGG | + | chr5.1:31802282-31802301 | None:intergenic | 45.0% | |
| TAGTTACCCGAACACTTTGG+TGG | + | chr5.1:31802279-31802298 | None:intergenic | 45.0% | |
| TGGTGTATGCAAGACCTTTG+AGG | + | chr5.1:31803372-31803391 | None:intergenic | 45.0% | |
| TTCCTATACCTAAGGCCCTA+GGG | + | chr5.1:31802912-31802931 | None:intergenic | 45.0% | |
| TTCTTGAAGTGTACTCCCTC+CGG | - | chr5.1:31800041-31800060 | MS.gene76635:intron | 45.0% | |
| TTGTGGAAATCAGGGTTGTG+TGG | + | chr5.1:31799335-31799354 | None:intergenic | 45.0% | |
| TTTCCTATACCTAAGGCCCT+AGG | + | chr5.1:31802913-31802932 | None:intergenic | 45.0% | |
| ! | AGCAAGAGAAGCGTGAGAAA+CGG | - | chr5.1:31803534-31803553 | MS.gene76635:intron | 45.0% |
| ! | TTAATTGGGGTTAGTGCAGC+AGG | + | chr5.1:31799946-31799965 | None:intergenic | 45.0% |
| AGGAACCAGGTTCTTCCCAA+GGG | + | chr5.1:31803352-31803371 | None:intergenic | 50.0% | |
| CAGCTTGCATAAACTCCCTC+TGG | + | chr5.1:31800193-31800212 | None:intergenic | 50.0% | |
| CATAGTCTCAAGGCTCCTGT+TGG | - | chr5.1:31799556-31799575 | MS.gene76635:intron | 50.0% | |
| CCATCCTCTTTCCTTCTCCT+AGG | - | chr5.1:31800891-31800910 | MS.gene76635:intron | 50.0% | |
| CCTAGGAGAAGGAAAGAGGA+TGG | + | chr5.1:31800894-31800913 | None:intergenic | 50.0% | |
| CCTTTCTGCCATCTACCAAC+AGG | + | chr5.1:31799574-31799593 | None:intergenic | 50.0% | |
| GAGAAGACGGGAAGAAAGGA+AGG | - | chr5.1:31803472-31803491 | MS.gene76635:intron | 50.0% | |
| GCAACCTAGGAGAAGGAAAG+AGG | + | chr5.1:31800898-31800917 | None:intergenic | 50.0% | |
| GGAAGAACCTGGTTCCTCAA+AGG | - | chr5.1:31803355-31803374 | MS.gene76635:intron | 50.0% | |
| GGGTCTACAGCAGAAGACTT+AGG | - | chr5.1:31801217-31801236 | MS.gene76635:intron | 50.0% | |
| TCAATGGAGGGGAGTGGAAA+TGG | - | chr5.1:31802851-31802870 | MS.gene76635:intron | 50.0% | |
| TGAAATCACCCTAGGGCCTT+AGG | - | chr5.1:31802901-31802920 | MS.gene76635:intron | 50.0% | |
| TGGATGAAGAACAGCTGGGT+GGG | - | chr5.1:31801407-31801426 | MS.gene76635:intron | 50.0% | |
| TTGGATGAAGAACAGCTGGG+TGG | - | chr5.1:31801406-31801425 | MS.gene76635:intron | 50.0% | |
| ! | CCTGTTGGTAGATGGCAGAA+AGG | - | chr5.1:31799571-31799590 | MS.gene76635:intron | 50.0% |
| ! | GGTTTGCTTGTGGTGACATG+TGG | - | chr5.1:31801428-31801447 | MS.gene76635:intron | 50.0% |
| ! | TCAAGGCTCCTGTTGGTAGA+TGG | - | chr5.1:31799563-31799582 | MS.gene76635:intron | 50.0% |
| ! | TGCAAGACCTTTGAGGAACC+AGG | + | chr5.1:31803365-31803384 | None:intergenic | 50.0% |
| AACCAGGTTCTTCCCAAGGG+CGG | + | chr5.1:31803349-31803368 | None:intergenic | 55.0% | |
| AAGAGGAGGAGCAGGCAATG+AGG | - | chr5.1:31801107-31801126 | MS.gene76635:intron | 55.0% | |
| AAGCGTGCTAGTCGTCCTCA+AGG | - | chr5.1:31801151-31801170 | MS.gene76635:intron | 55.0% | |
| AAGGTCACGCTGAAGCAGCA+AGG | - | chr5.1:31801242-31801261 | MS.gene76635:intron | 55.0% | |
| AATGAGGGAAGCTCTCGGCT+TGG | - | chr5.1:31801123-31801142 | MS.gene76635:intron | 55.0% | |
| ACTTACGATCTCGACCGCCA+CGG | + | chr5.1:31799195-31799214 | None:intergenic | 55.0% | |
| AGAGGAGGAGCAGGCAATGA+GGG | - | chr5.1:31801108-31801127 | MS.gene76635:intron | 55.0% | |
| AGGTCACGCTGAAGCAGCAA+GGG | - | chr5.1:31801243-31801262 | MS.gene76635:intron | 55.0% | |
| ATGGAGGGGAGTGGAAATGG+TGG | - | chr5.1:31802854-31802873 | MS.gene76635:intron | 55.0% | |
| CACCCTAGGGCCTTAGGTAT+AGG | - | chr5.1:31802907-31802926 | MS.gene76635:intron | 55.0% | |
| CAGGCAATGAGGGAAGCTCT+CGG | - | chr5.1:31801118-31801137 | MS.gene76635:intron | 55.0% | |
| GAGGAACCAGGTTCTTCCCA+AGG | + | chr5.1:31803353-31803372 | None:intergenic | 55.0% | |
| GCAGCAAGGGTTCAAGGTGT+TGG | - | chr5.1:31801256-31801275 | MS.gene76635:intron | 55.0% | |
| GCTGAAGCAGCAAGGGTTCA+AGG | - | chr5.1:31801250-31801269 | MS.gene76635:intron | 55.0% | |
| GGTCTTGCATACACCAGCTG+AGG | - | chr5.1:31803376-31803395 | MS.gene76635:intron | 55.0% | |
| GTGGTTTCAATGGAGGGGAG+TGG | - | chr5.1:31802845-31802864 | MS.gene76635:intron | 55.0% | |
| TACCCGAACACTTTGGTGGG+TGG | + | chr5.1:31802275-31802294 | None:intergenic | 55.0% | |
| TGAAAAGCGGCATTCCCGTG+AGG | - | chr5.1:31803505-31803524 | MS.gene76635:intron | 55.0% | |
| TGAGGACGACTAGCACGCTT+AGG | + | chr5.1:31801151-31801170 | None:intergenic | 55.0% | |
| ! | ACCCGAACACTTTGGTGGGT+GGG | + | chr5.1:31802274-31802293 | None:intergenic | 55.0% |
| ! | TCCCCACCCACCAAAGTGTT+CGG | - | chr5.1:31802269-31802288 | MS.gene76635:intron | 55.0% |
| CTGGTGCACGATGGCGCTAT+AGG | + | chr5.1:31799655-31799674 | None:intergenic | 60.0% | |
| GGGTGGGGAGATGGATACTG+TGG | + | chr5.1:31802258-31802277 | None:intergenic | 60.0% | |
| GTGCAGAGAACTCCGCCCTT+GGG | - | chr5.1:31803334-31803353 | MS.gene76635:intron | 60.0% | |
| TGTGCAGAGAACTCCGCCCT+TGG | - | chr5.1:31803333-31803352 | MS.gene76635:intron | 60.0% | |
| ! | CACTTTGGTGGGTGGGGAGA+TGG | + | chr5.1:31802267-31802286 | None:intergenic | 60.0% |
| ! | CAGCTGGGTGGGTTTGCTTG+TGG | - | chr5.1:31801418-31801437 | MS.gene76635:intron | 60.0% |
| ! | CCCCACCCACCAAAGTGTTC+GGG | - | chr5.1:31802270-31802289 | MS.gene76635:intron | 60.0% |
| ! | CCCGAACACTTTGGTGGGTG+GGG | + | chr5.1:31802273-31802292 | None:intergenic | 60.0% |
| ! | TGGGGTTAGTGCAGCAGGCA+CGG | + | chr5.1:31799941-31799960 | None:intergenic | 60.0% |
| CTCCGCCCTTGGGAAGAACC+TGG | - | chr5.1:31803344-31803363 | MS.gene76635:intron | 65.0% | |
| ACTCGAGGTGGCGTCCGTGG+CGG | - | chr5.1:31799178-31799197 | MS.gene76635:CDS | 70.0% | |
| CCAACTCGAGGTGGCGTCCG+TGG | - | chr5.1:31799175-31799194 | MS.gene76635:CDS | 70.0% | |
| CCACGGACGCCACCTCGAGT+TGG | + | chr5.1:31799178-31799197 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 31799166 | 31803628 | 31799166 | ID=MS.gene76635 |
| chr5.1 | mRNA | 31799166 | 31803628 | 31799166 | ID=MS.gene76635.t1;Parent=MS.gene76635 |
| chr5.1 | exon | 31803586 | 31803628 | 31803586 | ID=MS.gene76635.t1.exon1;Parent=MS.gene76635.t1 |
| chr5.1 | CDS | 31803586 | 31803628 | 31803586 | ID=cds.MS.gene76635.t1;Parent=MS.gene76635.t1 |
| chr5.1 | exon | 31803202 | 31803291 | 31803202 | ID=MS.gene76635.t1.exon2;Parent=MS.gene76635.t1 |
| chr5.1 | CDS | 31803202 | 31803291 | 31803202 | ID=cds.MS.gene76635.t1;Parent=MS.gene76635.t1 |
| chr5.1 | exon | 31801507 | 31801774 | 31801507 | ID=MS.gene76635.t1.exon3;Parent=MS.gene76635.t1 |
| chr5.1 | CDS | 31801507 | 31801774 | 31801507 | ID=cds.MS.gene76635.t1;Parent=MS.gene76635.t1 |
| chr5.1 | exon | 31799166 | 31799454 | 31799166 | ID=MS.gene76635.t1.exon4;Parent=MS.gene76635.t1 |
| chr5.1 | CDS | 31799166 | 31799454 | 31799166 | ID=cds.MS.gene76635.t1;Parent=MS.gene76635.t1 |
| Gene Sequence |
| Protein sequence |
