Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061275.t1 | XP_003610438.1 | 88 | 861 | 99 | 2 | 1 | 857 | 1 | 861 | 0.00E+00 | 1262.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061275.t1 | G7JJ78 | 88.0 | 861 | 99 | 2 | 1 | 857 | 1 | 861 | 0.0e+00 | 1262.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene061275 | 0.813369 | 2.65E-51 | -1.69E-46 |
| MS.gene049596 | MS.gene061275 | 0.813748 | 2.19E-51 | -1.69E-46 |
| MS.gene049622 | MS.gene061275 | 0.826428 | 2.73E-54 | -1.69E-46 |
| MS.gene049660 | MS.gene061275 | 0.805872 | 1.08E-49 | -1.69E-46 |
| MS.gene04985 | MS.gene061275 | 0.807241 | 5.57E-50 | -1.69E-46 |
| MS.gene049989 | MS.gene061275 | 0.897286 | 1.63E-76 | -1.69E-46 |
| MS.gene050297 | MS.gene061275 | 0.883391 | 4.67E-71 | -1.69E-46 |
| MS.gene05054 | MS.gene061275 | 0.808191 | 3.50E-50 | -1.69E-46 |
| MS.gene05124 | MS.gene061275 | 0.836018 | 1.20E-56 | -1.69E-46 |
| MS.gene051263 | MS.gene061275 | 0.800826 | 1.20E-48 | -1.69E-46 |
| MS.gene051339 | MS.gene061275 | 0.828328 | 9.56E-55 | -1.69E-46 |
| MS.gene051423 | MS.gene061275 | 0.837504 | 5.00E-57 | -1.69E-46 |
| MS.gene051629 | MS.gene061275 | 0.824476 | 7.91E-54 | -1.69E-46 |
| MS.gene051742 | MS.gene061275 | 0.875748 | 2.41E-68 | -1.69E-46 |
| MS.gene051816 | MS.gene061275 | 0.829986 | 3.79E-55 | -1.69E-46 |
| MS.gene051914 | MS.gene061275 | 0.823712 | 1.19E-53 | -1.69E-46 |
| MS.gene051955 | MS.gene061275 | 0.864968 | 8.30E-65 | -1.69E-46 |
| MS.gene052143 | MS.gene061275 | 0.893171 | 8.05E-75 | -1.69E-46 |
| MS.gene052169 | MS.gene061275 | 0.805578 | 1.25E-49 | -1.69E-46 |
| MS.gene052308 | MS.gene061275 | 0.904808 | 8.33E-80 | -1.69E-46 |
| MS.gene052367 | MS.gene061275 | 0.917554 | 4.61E-86 | -1.69E-46 |
| MS.gene053173 | MS.gene061275 | 0.889401 | 2.50E-73 | -1.69E-46 |
| MS.gene053348 | MS.gene061275 | 0.859936 | 2.93E-63 | -1.69E-46 |
| MS.gene053416 | MS.gene061275 | 0.880785 | 4.12E-70 | -1.69E-46 |
| MS.gene053417 | MS.gene061275 | 0.881912 | 1.62E-70 | -1.69E-46 |
| MS.gene05369 | MS.gene061275 | 0.828149 | 1.06E-54 | -1.69E-46 |
| MS.gene053929 | MS.gene061275 | 0.800724 | 1.26E-48 | -1.69E-46 |
| MS.gene054551 | MS.gene061275 | 0.882827 | 7.51E-71 | -1.69E-46 |
| MS.gene054552 | MS.gene061275 | 0.825419 | 4.74E-54 | -1.69E-46 |
| MS.gene054593 | MS.gene061275 | 0.88224 | 1.23E-70 | -1.69E-46 |
| MS.gene054614 | MS.gene061275 | 0.806378 | 8.47E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene061275 | 0.825597 | 4.30E-54 | -1.69E-46 |
| MS.gene054643 | MS.gene061275 | 0.822924 | 1.83E-53 | -1.69E-46 |
| MS.gene054662 | MS.gene061275 | 0.801097 | 1.06E-48 | -1.69E-46 |
| MS.gene054885 | MS.gene061275 | 0.814658 | 1.38E-51 | -1.69E-46 |
| MS.gene055308 | MS.gene061275 | 0.907445 | 5.03E-81 | -1.69E-46 |
| MS.gene055411 | MS.gene061275 | 0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene055578 | MS.gene061275 | 0.90267 | 7.64E-79 | -1.69E-46 |
| MS.gene055579 | MS.gene061275 | 0.832029 | 1.19E-55 | -1.69E-46 |
| MS.gene055957 | MS.gene061275 | 0.884746 | 1.47E-71 | -1.69E-46 |
| MS.gene056041 | MS.gene061275 | 0.936353 | 1.99E-97 | -1.69E-46 |
| MS.gene056042 | MS.gene061275 | 0.86148 | 9.96E-64 | -1.69E-46 |
| MS.gene05640 | MS.gene061275 | 0.878985 | 1.80E-69 | -1.69E-46 |
| MS.gene056526 | MS.gene061275 | 0.886743 | 2.62E-72 | -1.69E-46 |
| MS.gene056528 | MS.gene061275 | 0.850008 | 2.24E-60 | -1.69E-46 |
| MS.gene05652 | MS.gene061275 | 0.82756 | 1.46E-54 | -1.69E-46 |
| MS.gene057358 | MS.gene061275 | 0.830908 | 2.25E-55 | -1.69E-46 |
| MS.gene057359 | MS.gene061275 | 0.821094 | 4.85E-53 | -1.69E-46 |
| MS.gene057367 | MS.gene061275 | 0.816946 | 4.25E-52 | -1.69E-46 |
| MS.gene057458 | MS.gene061275 | 0.873553 | 1.35E-67 | -1.69E-46 |
| MS.gene057483 | MS.gene061275 | 0.825801 | 3.84E-54 | -1.69E-46 |
| MS.gene058128 | MS.gene061275 | 0.845322 | 4.37E-59 | -1.69E-46 |
| MS.gene058196 | MS.gene061275 | 0.832982 | 6.93E-56 | -1.69E-46 |
| MS.gene058197 | MS.gene061275 | 0.820025 | 8.53E-53 | -1.69E-46 |
| MS.gene058198 | MS.gene061275 | 0.819808 | 9.56E-53 | -1.69E-46 |
| MS.gene058818 | MS.gene061275 | 0.805149 | 1.53E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene061275 | 0.837185 | 6.03E-57 | -1.69E-46 |
| MS.gene058828 | MS.gene061275 | 0.812136 | 4.93E-51 | -1.69E-46 |
| MS.gene058844 | MS.gene061275 | 0.809839 | 1.55E-50 | -1.69E-46 |
| MS.gene058849 | MS.gene061275 | 0.823815 | 1.13E-53 | -1.69E-46 |
| MS.gene058853 | MS.gene061275 | 0.869248 | 3.57E-66 | -1.69E-46 |
| MS.gene059300 | MS.gene061275 | 0.853117 | 2.95E-61 | -1.69E-46 |
| MS.gene059553 | MS.gene061275 | 0.856868 | 2.40E-62 | -1.69E-46 |
| MS.gene059616 | MS.gene061275 | 0.812629 | 3.85E-51 | -1.69E-46 |
| MS.gene060473 | MS.gene061275 | 0.919955 | 2.36E-87 | -1.69E-46 |
| MS.gene060565 | MS.gene061275 | 0.909923 | 3.33E-82 | -1.69E-46 |
| MS.gene06057 | MS.gene061275 | 0.875571 | 2.78E-68 | -1.69E-46 |
| MS.gene060825 | MS.gene061275 | 0.826434 | 2.72E-54 | -1.69E-46 |
| MS.gene06093 | MS.gene061275 | 0.891029 | 5.77E-74 | -1.69E-46 |
| MS.gene061099 | MS.gene061275 | 0.884789 | 1.42E-71 | -1.69E-46 |
| MS.gene061260 | MS.gene061275 | 0.917965 | 2.79E-86 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061275.t1 | MTR_4g132160 | 91.057 | 861 | 73 | 2 | 1 | 857 | 1 | 861 | 0.0 | 1540 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061275.t1 | AT1G16630 | 29.073 | 939 | 424 | 43 | 20 | 850 | 34 | 838 | 9.47e-46 | 177 |
| MS.gene061275.t1 | AT2G16270 | 32.591 | 494 | 202 | 22 | 8 | 470 | 12 | 405 | 2.22e-39 | 157 |
| MS.gene061275.t1 | AT2G16270 | 70.000 | 50 | 11 | 2 | 805 | 850 | 701 | 750 | 7.31e-11 | 66.6 |
Find 174 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATGATGTTAAATTAAT+TGG | 0.132466 | 8.2:-2072142 | MS.gene061275:CDS |
| ACTTCTTCGCATGGGGTTAA+TGG | 0.237962 | 8.2:+2074119 | None:intergenic |
| TTCCTCATAGATGGCTTATC+TGG | 0.244401 | 8.2:+2071821 | None:intergenic |
| ATTTCGATGGATGAGTATTT+TGG | 0.246831 | 8.2:-2072583 | MS.gene061275:CDS |
| GTTTCTGAATTTCTTGGATT+AGG | 0.259148 | 8.2:+2074141 | None:intergenic |
| TCGTTCGGAATTCGCATATT+TGG | 0.274234 | 8.2:-2072804 | MS.gene061275:CDS |
| TTTCTGAATTTCTTGGATTA+GGG | 0.289901 | 8.2:+2074142 | None:intergenic |
| GTTGATACTGGTTCATTAGA+TGG | 0.302929 | 8.2:-2073639 | MS.gene061275:CDS |
| CATCCTCCGATGATTCCTTC+TGG | 0.310532 | 8.2:+2073139 | None:intergenic |
| TCTAATTCCATTAGCGGCTT+TGG | 0.321351 | 8.2:+2073231 | None:intergenic |
| GATCATCAGCCCTTGGTGTT+TGG | 0.342756 | 8.2:+2072245 | None:intergenic |
| TTATGAGTCTTCTGAACTTT+CGG | 0.349539 | 8.2:-2072887 | MS.gene061275:CDS |
| TTAATGGTTTCTGAATTTCT+TGG | 0.349999 | 8.2:+2074135 | None:intergenic |
| GGGTTTGATGAATTTGAAAC+TGG | 0.350216 | 8.2:+2074162 | None:intergenic |
| AGAACAACTTCAGCATGATA+TGG | 0.356822 | 8.2:-2072527 | MS.gene061275:CDS |
| GTGTGAGAGAAACTAGATCT+AGG | 0.366345 | 8.2:+2074051 | None:intergenic |
| TTACAAACCAAAGCCGCTAA+TGG | 0.368219 | 8.2:-2073238 | MS.gene061275:CDS |
| GGTCGCGGTGAAAATAAAAT+AGG | 0.371380 | 8.2:-2072649 | MS.gene061275:CDS |
| GACACAGATGCTGCAATTAG+AGG | 0.373147 | 8.2:-2072031 | MS.gene061275:CDS |
| CTGATCCTTTAGAACAGAAA+AGG | 0.377539 | 8.2:-2073662 | MS.gene061275:CDS |
| TTTCTGAACAAAGTCCTGTT+AGG | 0.378281 | 8.2:-2073077 | MS.gene061275:CDS |
| TTGTCCTCAGATCCAATCTT+AGG | 0.380737 | 8.2:+2071854 | None:intergenic |
| GAGTTGATTTCAGATGTTAG+AGG | 0.389002 | 8.2:-2072754 | MS.gene061275:CDS |
| GAATCATTGTTTAGAATCAT+AGG | 0.390137 | 8.2:+2073498 | None:intergenic |
| GCTGGCGATCTAACCTTTGC+CGG | 0.391178 | 8.2:+2073837 | None:intergenic |
| TCAAGTTAAAGTACTGCAAC+TGG | 0.391552 | 8.2:+2072716 | None:intergenic |
| GTTAATCAGAGTCCTATCTT+TGG | 0.391685 | 8.2:-2072670 | MS.gene061275:CDS |
| TTAGGCGTTCAAGTAGGATT+AGG | 0.395224 | 8.2:-2071450 | MS.gene061275:CDS |
| ACAGGCACATTCCTCATAGA+TGG | 0.401315 | 8.2:+2071812 | None:intergenic |
| GCCTCTTCTGACTACTCCAT+GGG | 0.407211 | 8.2:-2071650 | MS.gene061275:CDS |
| GAACAGAAAAGGGTTGATAC+TGG | 0.407790 | 8.2:-2073651 | MS.gene061275:CDS |
| ATCCTCCGATGATTCCTTCT+GGG | 0.408425 | 8.2:+2073140 | None:intergenic |
| GCAACGTGTGTTTCTTGAAC+AGG | 0.414525 | 8.2:+2072613 | None:intergenic |
| AAATATGCCAAGTTCAAATT+CGG | 0.415242 | 8.2:-2072218 | MS.gene061275:CDS |
| ATCTCAGCAACTTCTGAAAC+TGG | 0.416066 | 8.2:+2072088 | None:intergenic |
| GCATTAGCAGTGTAAGAAAC+TGG | 0.418494 | 8.2:+2073348 | None:intergenic |
| ACCAGTTGCAAAGCCTGCTC+TGG | 0.418548 | 8.2:+2072292 | None:intergenic |
| GAGGACAGTTTCATTATGTC+AGG | 0.419021 | 8.2:-2073210 | MS.gene061275:CDS |
| ACCAGAGCAGGCTTTGCAAC+TGG | 0.419706 | 8.2:-2072293 | MS.gene061275:CDS |
| TTCTGATGAAACTGTGAAGC+AGG | 0.425432 | 8.2:-2073112 | MS.gene061275:CDS |
| AAAGCCGCTAATGGAATTAG+AGG | 0.426519 | 8.2:-2073229 | MS.gene061275:CDS |
| GCGGCTTTGGTTTGTAATGA+AGG | 0.426809 | 8.2:+2073244 | None:intergenic |
| CGCGGGCCAATCTACTACTT+TGG | 0.432526 | 8.2:-2072320 | MS.gene061275:CDS |
| ATCCTACTTGAACGCCTAAC+CGG | 0.435617 | 8.2:+2071454 | None:intergenic |
| GGCCTCTTCTGACTACTCCA+TGG | 0.438649 | 8.2:-2071651 | MS.gene061275:CDS |
| GTTGATTTCGATGTTGCAGC+TGG | 0.440851 | 8.2:+2073819 | None:intergenic |
| AAAAGATCAGTTTATGAAAC+CGG | 0.441090 | 8.2:-2073856 | MS.gene061275:CDS |
| TGAACATTTAGATGCAAAGT+TGG | 0.442587 | 8.2:-2072401 | MS.gene061275:CDS |
| CTGTCCTCTAATTCCATTAG+CGG | 0.445999 | 8.2:+2073225 | None:intergenic |
| GAACAACTTCAGCATGATAT+GGG | 0.446308 | 8.2:-2072526 | MS.gene061275:CDS |
| TCTGGCAAGAGAGTCCTAAC+AGG | 0.449217 | 8.2:+2073063 | None:intergenic |
| ATTTCAATCACAAATTCTCC+AGG | 0.449988 | 8.2:-2072943 | MS.gene061275:CDS |
| ATGAGGGAAGGTTTAGAGAA+TGG | 0.450468 | 8.2:+2074084 | None:intergenic |
| AAAGATACCTGAAGGACTAT+TGG | 0.453579 | 8.2:+2074023 | None:intergenic |
| GAGGAATGTGCCTGTAGAAA+TGG | 0.458705 | 8.2:-2071804 | MS.gene061275:CDS |
| TCCTCATAGATGGCTTATCT+GGG | 0.459174 | 8.2:+2071822 | None:intergenic |
| CTATACTTGCTGCTTTGTGC+AGG | 0.459222 | 8.2:-2071962 | MS.gene061275:CDS |
| ACTCTCTCCTGTGGTAATTC+CGG | 0.462561 | 8.2:+2071678 | None:intergenic |
| ACTGGAGGAGTAGCCGCGGC+TGG | 0.464928 | 8.2:+2073366 | None:intergenic |
| CGGTGACTCAGCCATCTTGA+AGG | 0.465883 | 8.2:+2073764 | None:intergenic |
| CCGACAACAAAATTCATGTT+CGG | 0.467578 | 8.2:-2073698 | MS.gene061275:CDS |
| TGAATTTCCGAATTTGAACT+TGG | 0.469755 | 8.2:+2072211 | None:intergenic |
| TCCAGGGTCTCATGCTGTGT+TGG | 0.473321 | 8.2:-2072926 | MS.gene061275:CDS |
| TAATGAAGGAATTGTGGCCT+AGG | 0.475030 | 8.2:+2073258 | None:intergenic |
| CCTGAGAAACTTCTTCGCAT+GGG | 0.479169 | 8.2:+2074111 | None:intergenic |
| CACTGGATTTGAAAATGCAT+TGG | 0.480475 | 8.2:-2072497 | MS.gene061275:CDS |
| TGAGTCCAATGTTGTTCCTA+TGG | 0.481899 | 8.2:-2073556 | MS.gene061275:CDS |
| TGATCCTTTAGAACAGAAAA+GGG | 0.482946 | 8.2:-2073661 | MS.gene061275:CDS |
| ACTCCCGCCAATAGTCCTTC+AGG | 0.484257 | 8.2:-2074030 | MS.gene061275:intron |
| GTTCTACCAAAGTAGTAGAT+TGG | 0.488968 | 8.2:+2072314 | None:intergenic |
| CCAACCACGTCCATTTCTAC+AGG | 0.492594 | 8.2:+2071794 | None:intergenic |
| CTTGCTGCTTTGTGCAGGTA+CGG | 0.493645 | 8.2:-2071957 | MS.gene061275:CDS |
| CATGATATGGGGATGAACAC+TGG | 0.495085 | 8.2:-2072514 | MS.gene061275:CDS |
| TCCATGGGTTCACCATCCTA+TGG | 0.496368 | 8.2:-2071635 | MS.gene061275:CDS |
| TCCTGAGAAACTTCTTCGCA+TGG | 0.501589 | 8.2:+2074110 | None:intergenic |
| TCTGATTCTATATAAGTAGC+AGG | 0.505688 | 8.2:+2072439 | None:intergenic |
| TTGATACTGGTTCATTAGAT+GGG | 0.506576 | 8.2:-2073638 | MS.gene061275:CDS |
| AGCATCAACAAGAGGGTCTA+CGG | 0.513163 | 8.2:+2073326 | None:intergenic |
| ATACATTGTTAGACTTCCAT+AGG | 0.513338 | 8.2:+2071619 | None:intergenic |
| CAAAATGAAGTCTGTGGTGA+AGG | 0.513393 | 8.2:-2072190 | MS.gene061275:CDS |
| CCCATGCGAAGAAGTTTCTC+AGG | 0.514117 | 8.2:-2074111 | MS.gene061275:CDS |
| GCTGGACTAAGCTTAAAAGT+AGG | 0.515924 | 8.2:+2073384 | None:intergenic |
| CAGCTGATATTCCCACTGCT+TGG | 0.516834 | 8.2:+2072053 | None:intergenic |
| GAATCATTGTTTCTAATCAA+AGG | 0.517302 | 8.2:+2073426 | None:intergenic |
| CAGACTCACAACTCGGAAAG+AGG | 0.517493 | 8.2:+2073604 | None:intergenic |
| TTATATAGAATCAGAAGAGC+AGG | 0.518245 | 8.2:-2072431 | MS.gene061275:CDS |
| TCAAAGCTGCTCATTTCTGA+AGG | 0.519677 | 8.2:+2071761 | None:intergenic |
| TGAAGATGCTTTAGAGTCTG+AGG | 0.522367 | 8.2:-2072350 | MS.gene061275:CDS |
| AGAGAAAACAGTTGAAGCAA+AGG | 0.522792 | 8.2:-2073043 | MS.gene061275:CDS |
| GGAATTGTGGCCTAGGGGAT+AGG | 0.532945 | 8.2:+2073265 | None:intergenic |
| TCTAGGGTTAGCGGCAATGA+GGG | 0.540403 | 8.2:+2074068 | None:intergenic |
| TTGATGAATTTGAAACTGGA+GGG | 0.540624 | 8.2:+2074166 | None:intergenic |
| TGATGAATTTGAAACTGGAG+GGG | 0.545019 | 8.2:+2074167 | None:intergenic |
| GGTTTGTAATGAAGGAATTG+TGG | 0.549064 | 8.2:+2073252 | None:intergenic |
| TTCATCAGACTGAGTATCCT+CGG | 0.550240 | 8.2:+2073164 | None:intergenic |
| GATACCTGAAGGACTATTGG+CGG | 0.550722 | 8.2:+2074026 | None:intergenic |
| AGGAGATAGTTACTCCGGTT+AGG | 0.555208 | 8.2:-2071468 | MS.gene061275:CDS |
| TGTGAGAGAAACTAGATCTA+GGG | 0.557213 | 8.2:+2074052 | None:intergenic |
| ATCTGAAATCAACTCAGAGA+TGG | 0.558056 | 8.2:+2072762 | None:intergenic |
| GGGGATTTGTCGTTGTTGAG+AGG | 0.558491 | 8.2:+2074186 | None:intergenic |
| GAAACTAGATCTAGGGTTAG+CGG | 0.559957 | 8.2:+2074059 | None:intergenic |
| TCTGTGGAGAAGCCTAAGAT+TGG | 0.560840 | 8.2:-2071866 | MS.gene061275:CDS |
| TCCATAGGATGGTGAACCCA+TGG | 0.561266 | 8.2:+2071634 | None:intergenic |
| TTTGATGAATTTGAAACTGG+AGG | 0.561812 | 8.2:+2074165 | None:intergenic |
| CTGGACTAAGCTTAAAAGTA+GGG | 0.562564 | 8.2:+2073385 | None:intergenic |
| TACTTTGGTAGAACCAGAGC+AGG | 0.564168 | 8.2:-2072305 | MS.gene061275:CDS |
| AATGAAGGAATTGTGGCCTA+GGG | 0.570744 | 8.2:+2073259 | None:intergenic |
| TCAGTTTATGAAACCGGCAA+AGG | 0.571045 | 8.2:-2073850 | MS.gene061275:CDS |
| TGAACTTTCGGAGTTTGCAA+AGG | 0.572896 | 8.2:-2072875 | MS.gene061275:CDS |
| TTTATAGGGACGCGGCGAAG+AGG | 0.574213 | 8.2:-2071488 | MS.gene061275:intron |
| CAACAAAATTCATGTTCGGA+AGG | 0.575732 | 8.2:-2073694 | MS.gene061275:CDS |
| ATCATCCATAGGAACAACAT+TGG | 0.578422 | 8.2:+2073551 | None:intergenic |
| AGGTAATGTAGATACAAAGC+TGG | 0.578760 | 8.2:-2072170 | MS.gene061275:CDS |
| TTACCACAGGAGAGAGTCGT+TGG | 0.578772 | 8.2:-2071672 | MS.gene061275:CDS |
| ATTGTTAGACTTCCATAGGA+TGG | 0.578999 | 8.2:+2071623 | None:intergenic |
| CTGAGAAACTTCTTCGCATG+GGG | 0.580112 | 8.2:+2074112 | None:intergenic |
| AGAGTCTGAGGAAGCACTCG+CGG | 0.581478 | 8.2:-2072338 | MS.gene061275:CDS |
| CCTGTAGAAATGGACGTGGT+TGG | 0.581689 | 8.2:-2071794 | MS.gene061275:CDS |
| GAAGCCTAAGATTGGATCTG+AGG | 0.582716 | 8.2:-2071858 | MS.gene061275:CDS |
| GAGTCTGAGGAAGCACTCGC+GGG | 0.584357 | 8.2:-2072337 | MS.gene061275:CDS |
| ATACCTGAAGGACTATTGGC+GGG | 0.584843 | 8.2:+2074027 | None:intergenic |
| TCCAACACAGCATGAGACCC+TGG | 0.586313 | 8.2:+2072925 | None:intergenic |
| ACACAGATGCTGCAATTAGA+GGG | 0.588423 | 8.2:-2072030 | MS.gene061275:CDS |
| GGGTTAGCGGCAATGAGGGA+AGG | 0.589585 | 8.2:+2074072 | None:intergenic |
| CAGAGTCCTATCTTTGGTCG+CGG | 0.593626 | 8.2:-2072664 | MS.gene061275:CDS |
| CAAAGCTGCTCATTTCTGAA+GGG | 0.594529 | 8.2:+2071762 | None:intergenic |
| GATCTCTGCTTCCTTCAAGA+TGG | 0.595344 | 8.2:-2073775 | MS.gene061275:CDS |
| TAAGCTTAAAAGTAGGGTCA+AGG | 0.597364 | 8.2:+2073391 | None:intergenic |
| GTTGAATCAGTATACTCAGA+AGG | 0.600194 | 8.2:-2072271 | MS.gene061275:CDS |
| AACCGCTTATACAGGAGAAG+TGG | 0.600502 | 8.2:+2071420 | None:intergenic |
| AAACAAATTACCTATCCCCT+AGG | 0.602260 | 8.2:-2073275 | MS.gene061275:CDS |
| GAGGAATCAGCATCAACAAG+AGG | 0.603625 | 8.2:+2073318 | None:intergenic |
| ATCTAGGGTTAGCGGCAATG+AGG | 0.603945 | 8.2:+2074067 | None:intergenic |
| CCCCAGATAAGCCATCTATG+AGG | 0.606478 | 8.2:-2071823 | MS.gene061275:CDS |
| ACGTGTGTTTCTTGAACAGG+AGG | 0.607471 | 8.2:+2072616 | None:intergenic |
| CAAGTTAAAGTACTGCAACT+GGG | 0.609993 | 8.2:+2072717 | None:intergenic |
| AAAAGCGCCGGAATTACCAC+AGG | 0.610343 | 8.2:-2071685 | MS.gene061275:CDS |
| AAATCTTCAGACTCACAACT+CGG | 0.613094 | 8.2:+2073597 | None:intergenic |
| CGTTGCCTCAGAGATTTCGA+TGG | 0.613875 | 8.2:-2072596 | MS.gene061275:CDS |
| TGAATCCCAGAAGGAATCAT+CGG | 0.616386 | 8.2:-2073145 | MS.gene061275:CDS |
| GAAATTCAAAATGAAGTCTG+TGG | 0.622812 | 8.2:-2072196 | MS.gene061275:CDS |
| TTTCAATCACAAATTCTCCA+GGG | 0.626416 | 8.2:-2072942 | MS.gene061275:CDS |
| TAGGCTCGTTCCTCTCCGCA+AGG | 0.628949 | 8.2:+2073730 | None:intergenic |
| TTGTTGTCGGAAGAAGGAGT+AGG | 0.632543 | 8.2:+2073711 | None:intergenic |
| CGAAGAGGAGATAGTTACTC+CGG | 0.635705 | 8.2:-2071473 | MS.gene061275:CDS |
| ACCCATGGAGTAGTCAGAAG+AGG | 0.635753 | 8.2:+2071649 | None:intergenic |
| AATGTATGAGAAAATTCCAA+AGG | 0.637812 | 8.2:-2071603 | MS.gene061275:intron |
| CTCCGGTTAGGCGTTCAAGT+AGG | 0.639790 | 8.2:-2071456 | MS.gene061275:CDS |
| ATTGGATGCTCAAGAATCTG+AGG | 0.642965 | 8.2:-2072479 | MS.gene061275:CDS |
| TTATACGACAAATCATCCAT+AGG | 0.646153 | 8.2:+2073540 | None:intergenic |
| TCAGTCTGATGAATCCCAGA+AGG | 0.647686 | 8.2:-2073154 | MS.gene061275:CDS |
| AACAACTTCAGCATGATATG+GGG | 0.647874 | 8.2:-2072525 | MS.gene061275:CDS |
| AGGAATCAGCATCAACAAGA+GGG | 0.648359 | 8.2:+2073319 | None:intergenic |
| TTCGATCTCAAAGAAAAGCG+TGG | 0.648845 | 8.2:+2073009 | None:intergenic |
| TTGAAGGAAGCAGAGATCGT+CGG | 0.654068 | 8.2:+2073780 | None:intergenic |
| TTCAGATACAGATGTTACCG+AGG | 0.656226 | 8.2:-2073181 | MS.gene061275:CDS |
| GAAAGAAAATCCTTGCGGAG+AGG | 0.661412 | 8.2:-2073740 | MS.gene061275:CDS |
| CTCATCCATCGAAATCTCTG+AGG | 0.661658 | 8.2:+2072591 | None:intergenic |
| CACACGGATGACCAAGCAGT+GGG | 0.663869 | 8.2:-2072064 | MS.gene061275:CDS |
| CCTCATAGATGGCTTATCTG+GGG | 0.670344 | 8.2:+2071823 | None:intergenic |
| AGAAGGAGACCAAACACCAA+GGG | 0.671884 | 8.2:-2072254 | MS.gene061275:CDS |
| GAATCTGAGGAAGTGCACAA+TGG | 0.672121 | 8.2:-2072466 | MS.gene061275:CDS |
| CAGAAGGAGACCAAACACCA+AGG | 0.672990 | 8.2:-2072255 | MS.gene061275:CDS |
| ACCGAGAAAGAAAATCCTTG+CGG | 0.686892 | 8.2:-2073745 | MS.gene061275:CDS |
| ATCCCAGAAGGAATCATCGG+AGG | 0.688240 | 8.2:-2073142 | MS.gene061275:CDS |
| AGAAACTGGAGGAGTAGCCG+CGG | 0.691010 | 8.2:+2073362 | None:intergenic |
| ACACACGGATGACCAAGCAG+TGG | 0.696307 | 8.2:-2072065 | MS.gene061275:CDS |
| AGGCCAACGACTCTCTCCTG+TGG | 0.696396 | 8.2:+2071669 | None:intergenic |
| ATGAAGGAATTGTGGCCTAG+GGG | 0.699302 | 8.2:+2073260 | None:intergenic |
| AGAAGTTGCTGAGATACACA+CGG | 0.700965 | 8.2:-2072080 | MS.gene061275:CDS |
| TGTGCCTGTAGAAATGGACG+TGG | 0.719113 | 8.2:-2071798 | MS.gene061275:CDS |
| TTAGCAGTGTAAGAAACTGG+AGG | 0.719518 | 8.2:+2073351 | None:intergenic |
| CGTGTGTTTCTTGAACAGGA+GGG | 0.721446 | 8.2:+2072617 | None:intergenic |
| AGGGTCATAAGGTGGCACAG+AGG | 0.740482 | 8.2:+2073299 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTTTATGTATTAATTT+TGG | - | chr8.2:2071676-2071695 | MS.gene061275:CDS | 10.0% |
| !! | GAAAATGATGTTAAATTAAT+TGG | - | chr8.2:2073473-2073492 | MS.gene061275:CDS | 15.0% |
| !!! | TCATCATATTGTTTTTTATA+GGG | - | chr8.2:2074113-2074132 | MS.gene061275:CDS | 15.0% |
| !!! | TTCATCATATTGTTTTTTAT+AGG | - | chr8.2:2074112-2074131 | MS.gene061275:CDS | 15.0% |
| !! | ATTTCAAATTTAATCTGTGT+TGG | - | chr8.2:2071654-2071673 | MS.gene061275:CDS | 20.0% |
| ! | AAAAGATCAGTTTATGAAAC+CGG | - | chr8.2:2071759-2071778 | MS.gene061275:CDS | 25.0% |
| ! | AAATATGCCAAGTTCAAATT+CGG | - | chr8.2:2073397-2073416 | MS.gene061275:CDS | 25.0% |
| ! | AATGTATGAGAAAATTCCAA+AGG | - | chr8.2:2074012-2074031 | MS.gene061275:intron | 25.0% |
| ! | TTAATGGTTTCTGAATTTCT+TGG | + | chr8.2:2071483-2071502 | None:intergenic | 25.0% |
| ! | TTTCTGAATTTCTTGGATTA+GGG | + | chr8.2:2071476-2071495 | None:intergenic | 25.0% |
| !! | GAATCATTGTTTAGAATCAT+AGG | + | chr8.2:2072120-2072139 | None:intergenic | 25.0% |
| !!! | AAAGGAACATTTTGAAATGA+GGG | + | chr8.2:2072174-2072193 | None:intergenic | 25.0% |
| !!! | GAATCATTGTTTCTAATCAA+AGG | + | chr8.2:2072192-2072211 | None:intergenic | 25.0% |
| !!! | TAATTTGTTTTAGGGTCATA+AGG | + | chr8.2:2072330-2072349 | None:intergenic | 25.0% |
| ATACATTGTTAGACTTCCAT+AGG | + | chr8.2:2073999-2074018 | None:intergenic | 30.0% | |
| ATTTCAATCACAAATTCTCC+AGG | - | chr8.2:2072672-2072691 | MS.gene061275:CDS | 30.0% | |
| GAAATTCAAAATGAAGTCTG+TGG | - | chr8.2:2073419-2073438 | MS.gene061275:CDS | 30.0% | |
| GTTTCTGAATTTCTTGGATT+AGG | + | chr8.2:2071477-2071496 | None:intergenic | 30.0% | |
| TCTGATTCTATATAAGTAGC+AGG | + | chr8.2:2073179-2073198 | None:intergenic | 30.0% | |
| TGAAAGAAAAAGATACCTGA+AGG | + | chr8.2:2071603-2071622 | None:intergenic | 30.0% | |
| TGAACATTTAGATGCAAAGT+TGG | - | chr8.2:2073214-2073233 | MS.gene061275:CDS | 30.0% | |
| TGAATTTCCGAATTTGAACT+TGG | + | chr8.2:2073407-2073426 | None:intergenic | 30.0% | |
| TTATACGACAAATCATCCAT+AGG | + | chr8.2:2072078-2072097 | None:intergenic | 30.0% | |
| TTATATAGAATCAGAAGAGC+AGG | - | chr8.2:2073184-2073203 | MS.gene061275:CDS | 30.0% | |
| TTATGAGTCTTCTGAACTTT+CGG | - | chr8.2:2072728-2072747 | MS.gene061275:CDS | 30.0% | |
| TTTCAATCACAAATTCTCCA+GGG | - | chr8.2:2072673-2072692 | MS.gene061275:CDS | 30.0% | |
| ! | AAGTATAGCACAATGTTTTG+AGG | + | chr8.2:2073641-2073660 | None:intergenic | 30.0% |
| ! | ATTTCGATGGATGAGTATTT+TGG | - | chr8.2:2073032-2073051 | MS.gene061275:CDS | 30.0% |
| ! | TTGATGAATTTGAAACTGGA+GGG | + | chr8.2:2071452-2071471 | None:intergenic | 30.0% |
| ! | TTTGATGAATTTGAAACTGG+AGG | + | chr8.2:2071453-2071472 | None:intergenic | 30.0% |
| !! | AAAATTCGCTTTTGCAAACT+GGG | + | chr8.2:2072784-2072803 | None:intergenic | 30.0% |
| !! | TGATCCTTTAGAACAGAAAA+GGG | - | chr8.2:2071954-2071973 | MS.gene061275:CDS | 30.0% |
| !! | TTGATACTGGTTCATTAGAT+GGG | - | chr8.2:2071977-2071996 | MS.gene061275:CDS | 30.0% |
| !!! | CAAAGGAACATTTTGAAATG+AGG | + | chr8.2:2072175-2072194 | None:intergenic | 30.0% |
| !!! | GGGATAGGTAATTTGTTTTA+GGG | + | chr8.2:2072338-2072357 | None:intergenic | 30.0% |
| !!! | TATTGTTTTTTATAGGGACG+CGG | - | chr8.2:2074119-2074138 | MS.gene061275:CDS | 30.0% |
| AAACAAATTACCTATCCCCT+AGG | - | chr8.2:2072340-2072359 | MS.gene061275:CDS | 35.0% | |
| AAAGATACCTGAAGGACTAT+TGG | + | chr8.2:2071595-2071614 | None:intergenic | 35.0% | |
| AAATCTTCAGACTCACAACT+CGG | + | chr8.2:2072021-2072040 | None:intergenic | 35.0% | |
| AACAACTTCAGCATGATATG+GGG | - | chr8.2:2073090-2073109 | MS.gene061275:CDS | 35.0% | |
| AGAACAACTTCAGCATGATA+TGG | - | chr8.2:2073088-2073107 | MS.gene061275:CDS | 35.0% | |
| AGAGAAAACAGTTGAAGCAA+AGG | - | chr8.2:2072572-2072591 | MS.gene061275:CDS | 35.0% | |
| AGGTAATGTAGATACAAAGC+TGG | - | chr8.2:2073445-2073464 | MS.gene061275:CDS | 35.0% | |
| ATCATCCATAGGAACAACAT+TGG | + | chr8.2:2072067-2072086 | None:intergenic | 35.0% | |
| ATTGTTAGACTTCCATAGGA+TGG | + | chr8.2:2073995-2074014 | None:intergenic | 35.0% | |
| CAACAAAATTCATGTTCGGA+AGG | - | chr8.2:2071921-2071940 | MS.gene061275:CDS | 35.0% | |
| CAATCAACAATACTCACCTT+TGG | + | chr8.2:2074031-2074050 | None:intergenic | 35.0% | |
| CACTGGATTTGAAAATGCAT+TGG | - | chr8.2:2073118-2073137 | MS.gene061275:CDS | 35.0% | |
| CCGACAACAAAATTCATGTT+CGG | - | chr8.2:2071917-2071936 | MS.gene061275:CDS | 35.0% | |
| CTGGACTAAGCTTAAAAGTA+GGG | + | chr8.2:2072233-2072252 | None:intergenic | 35.0% | |
| GAACAACTTCAGCATGATAT+GGG | - | chr8.2:2073089-2073108 | MS.gene061275:CDS | 35.0% | |
| GGTTTGTAATGAAGGAATTG+TGG | + | chr8.2:2072366-2072385 | None:intergenic | 35.0% | |
| GTTAATCAGAGTCCTATCTT+TGG | - | chr8.2:2072945-2072964 | MS.gene061275:CDS | 35.0% | |
| GTTCTACCAAAGTAGTAGAT+TGG | + | chr8.2:2073304-2073323 | None:intergenic | 35.0% | |
| GTTGAATCAGTATACTCAGA+AGG | - | chr8.2:2073344-2073363 | MS.gene061275:CDS | 35.0% | |
| TAAGCTTAAAAGTAGGGTCA+AGG | + | chr8.2:2072227-2072246 | None:intergenic | 35.0% | |
| TGTGAGAGAAACTAGATCTA+GGG | + | chr8.2:2071566-2071585 | None:intergenic | 35.0% | |
| TTTCTGAACAAAGTCCTGTT+AGG | - | chr8.2:2072538-2072557 | MS.gene061275:CDS | 35.0% | |
| ! | ATCTGAAATCAACTCAGAGA+TGG | + | chr8.2:2072856-2072875 | None:intergenic | 35.0% |
| ! | GAGTTGATTTCAGATGTTAG+AGG | - | chr8.2:2072861-2072880 | MS.gene061275:CDS | 35.0% |
| ! | GGGTTTGATGAATTTGAAAC+TGG | + | chr8.2:2071456-2071475 | None:intergenic | 35.0% |
| ! | TCAACCCTTTTCTGTTCTAA+AGG | + | chr8.2:2071961-2071980 | None:intergenic | 35.0% |
| ! | TGATGAATTTGAAACTGGAG+GGG | + | chr8.2:2071451-2071470 | None:intergenic | 35.0% |
| ! | TGTGTTGGAAGACTTTTATG+AGG | - | chr8.2:2072704-2072723 | MS.gene061275:CDS | 35.0% |
| ! | TTTGCAAAAGCGAATTTTGC+AGG | - | chr8.2:2072786-2072805 | MS.gene061275:CDS | 35.0% |
| ! | TTTGCTTCAACTGTTTTCTC+TGG | + | chr8.2:2072573-2072592 | None:intergenic | 35.0% |
| !! | CAAAAAGTTTACTAGCTCTG+TGG | - | chr8.2:2073733-2073752 | MS.gene061275:CDS | 35.0% |
| !! | CAAAATTCGCTTTTGCAAAC+TGG | + | chr8.2:2072785-2072804 | None:intergenic | 35.0% |
| !! | CAAGTTAAAGTACTGCAACT+GGG | + | chr8.2:2072901-2072920 | None:intergenic | 35.0% |
| !! | CCGAACATGAATTTTGTTGT+CGG | + | chr8.2:2071920-2071939 | None:intergenic | 35.0% |
| !! | CTGATCCTTTAGAACAGAAA+AGG | - | chr8.2:2071953-2071972 | MS.gene061275:CDS | 35.0% |
| !! | GTTGATACTGGTTCATTAGA+TGG | - | chr8.2:2071976-2071995 | MS.gene061275:CDS | 35.0% |
| !! | TCAAGTTAAAGTACTGCAAC+TGG | + | chr8.2:2072902-2072921 | None:intergenic | 35.0% |
| !! | TGAATTTTGTTGTCGGAAGA+AGG | + | chr8.2:2071913-2071932 | None:intergenic | 35.0% |
| !!! | GGGGATAGGTAATTTGTTTT+AGG | + | chr8.2:2072339-2072358 | None:intergenic | 35.0% |
| !!! | TTTGTTTTAGGGTCATAAGG+TGG | + | chr8.2:2072327-2072346 | None:intergenic | 35.0% |
| AAAGCCGCTAATGGAATTAG+AGG | - | chr8.2:2072386-2072405 | MS.gene061275:CDS | 40.0% | |
| AATGAAGGAATTGTGGCCTA+GGG | + | chr8.2:2072359-2072378 | None:intergenic | 40.0% | |
| ACACAGATGCTGCAATTAGA+GGG | - | chr8.2:2073585-2073604 | MS.gene061275:CDS | 40.0% | |
| ACCGAGAAAGAAAATCCTTG+CGG | - | chr8.2:2071870-2071889 | MS.gene061275:CDS | 40.0% | |
| AGAAGTTGCTGAGATACACA+CGG | - | chr8.2:2073535-2073554 | MS.gene061275:CDS | 40.0% | |
| AGGAATCAGCATCAACAAGA+GGG | + | chr8.2:2072299-2072318 | None:intergenic | 40.0% | |
| ATGAGGGAAGGTTTAGAGAA+TGG | + | chr8.2:2071534-2071553 | None:intergenic | 40.0% | |
| ATTGGATGCTCAAGAATCTG+AGG | - | chr8.2:2073136-2073155 | MS.gene061275:CDS | 40.0% | |
| CAAAATGAAGTCTGTGGTGA+AGG | - | chr8.2:2073425-2073444 | MS.gene061275:CDS | 40.0% | |
| CAAAGCTGCTCATTTCTGAA+GGG | + | chr8.2:2073856-2073875 | None:intergenic | 40.0% | |
| CTGTCCTCTAATTCCATTAG+CGG | + | chr8.2:2072393-2072412 | None:intergenic | 40.0% | |
| GAGGACAGTTTCATTATGTC+AGG | - | chr8.2:2072405-2072424 | MS.gene061275:CDS | 40.0% | |
| GCATTAGCAGTGTAAGAAAC+TGG | + | chr8.2:2072270-2072289 | None:intergenic | 40.0% | |
| GCTGGACTAAGCTTAAAAGT+AGG | + | chr8.2:2072234-2072253 | None:intergenic | 40.0% | |
| GGTCGCGGTGAAAATAAAAT+AGG | - | chr8.2:2072966-2072985 | MS.gene061275:CDS | 40.0% | |
| GTGTGAGAGAAACTAGATCT+AGG | + | chr8.2:2071567-2071586 | None:intergenic | 40.0% | |
| TAATGAAGGAATTGTGGCCT+AGG | + | chr8.2:2072360-2072379 | None:intergenic | 40.0% | |
| TCAAAGCTGCTCATTTCTGA+AGG | + | chr8.2:2073857-2073876 | None:intergenic | 40.0% | |
| TCAGTTTATGAAACCGGCAA+AGG | - | chr8.2:2071765-2071784 | MS.gene061275:CDS | 40.0% | |
| TCCTCATAGATGGCTTATCT+GGG | + | chr8.2:2073796-2073815 | None:intergenic | 40.0% | |
| TCGTTCGGAATTCGCATATT+TGG | - | chr8.2:2072811-2072830 | MS.gene061275:CDS | 40.0% | |
| TCTAATTCCATTAGCGGCTT+TGG | + | chr8.2:2072387-2072406 | None:intergenic | 40.0% | |
| TGAACTTTCGGAGTTTGCAA+AGG | - | chr8.2:2072740-2072759 | MS.gene061275:CDS | 40.0% | |
| TGAATCCCAGAAGGAATCAT+CGG | - | chr8.2:2072470-2072489 | MS.gene061275:CDS | 40.0% | |
| TGAGTCCAATGTTGTTCCTA+TGG | - | chr8.2:2072059-2072078 | MS.gene061275:CDS | 40.0% | |
| TTACAAACCAAAGCCGCTAA+TGG | - | chr8.2:2072377-2072396 | MS.gene061275:CDS | 40.0% | |
| TTAGCAGTGTAAGAAACTGG+AGG | + | chr8.2:2072267-2072286 | None:intergenic | 40.0% | |
| TTAGGCGTTCAAGTAGGATT+AGG | - | chr8.2:2074165-2074184 | MS.gene061275:CDS | 40.0% | |
| TTCAGATACAGATGTTACCG+AGG | - | chr8.2:2072434-2072453 | MS.gene061275:CDS | 40.0% | |
| TTCATCAGACTGAGTATCCT+CGG | + | chr8.2:2072454-2072473 | None:intergenic | 40.0% | |
| TTCCTCATAGATGGCTTATC+TGG | + | chr8.2:2073797-2073816 | None:intergenic | 40.0% | |
| TTCGATCTCAAAGAAAAGCG+TGG | + | chr8.2:2072609-2072628 | None:intergenic | 40.0% | |
| TTCTGATGAAACTGTGAAGC+AGG | - | chr8.2:2072503-2072522 | MS.gene061275:CDS | 40.0% | |
| TTGTCCTCAGATCCAATCTT+AGG | + | chr8.2:2073764-2073783 | None:intergenic | 40.0% | |
| ! | CGAATTTTGCAGGTTTCGTT+CGG | - | chr8.2:2072796-2072815 | MS.gene061275:CDS | 40.0% |
| ! | GAAACTAGATCTAGGGTTAG+CGG | + | chr8.2:2071559-2071578 | None:intergenic | 40.0% |
| ! | TCCGCAAGGATTTTCTTTCT+CGG | + | chr8.2:2071874-2071893 | None:intergenic | 40.0% |
| ! | TTGCAGGTGCAACTTTTAAC+TGG | - | chr8.2:2073687-2073706 | MS.gene061275:CDS | 40.0% |
| ! | TTTTCATGATCATCAGCCCT+TGG | + | chr8.2:2073380-2073399 | None:intergenic | 40.0% |
| !! | ATCTCAGCAACTTCTGAAAC+TGG | + | chr8.2:2073530-2073549 | None:intergenic | 40.0% |
| !! | GAACAGAAAAGGGTTGATAC+TGG | - | chr8.2:2071964-2071983 | MS.gene061275:CDS | 40.0% |
| !! | GTGCAACTTTTAACTGGTCA+AGG | - | chr8.2:2073693-2073712 | MS.gene061275:CDS | 40.0% |
| !! | TGAAGATGCTTTAGAGTCTG+AGG | - | chr8.2:2073265-2073284 | MS.gene061275:CDS | 40.0% |
| !!! | ACGCTTTTCTTTGAGATCGA+AGG | - | chr8.2:2072608-2072627 | MS.gene061275:CDS | 40.0% |
| ACAGGCACATTCCTCATAGA+TGG | + | chr8.2:2073806-2073825 | None:intergenic | 45.0% | |
| ACGTGTGTTTCTTGAACAGG+AGG | + | chr8.2:2073002-2073021 | None:intergenic | 45.0% | |
| ACTCTCTCCTGTGGTAATTC+CGG | + | chr8.2:2073940-2073959 | None:intergenic | 45.0% | |
| ACTTCTTCGCATGGGGTTAA+TGG | + | chr8.2:2071499-2071518 | None:intergenic | 45.0% | |
| AGAAGGAGACCAAACACCAA+GGG | - | chr8.2:2073361-2073380 | MS.gene061275:CDS | 45.0% | |
| AGCATCAACAAGAGGGTCTA+CGG | + | chr8.2:2072292-2072311 | None:intergenic | 45.0% | |
| AGGAGATAGTTACTCCGGTT+AGG | - | chr8.2:2074147-2074166 | MS.gene061275:CDS | 45.0% | |
| ATACCTGAAGGACTATTGGC+GGG | + | chr8.2:2071591-2071610 | None:intergenic | 45.0% | |
| ATCCTACTTGAACGCCTAAC+CGG | + | chr8.2:2074164-2074183 | None:intergenic | 45.0% | |
| ATCCTCCGATGATTCCTTCT+GGG | + | chr8.2:2072478-2072497 | None:intergenic | 45.0% | |
| ATGAAGGAATTGTGGCCTAG+GGG | + | chr8.2:2072358-2072377 | None:intergenic | 45.0% | |
| CATGATATGGGGATGAACAC+TGG | - | chr8.2:2073101-2073120 | MS.gene061275:CDS | 45.0% | |
| CCTCATAGATGGCTTATCTG+GGG | + | chr8.2:2073795-2073814 | None:intergenic | 45.0% | |
| CCTGAGAAACTTCTTCGCAT+GGG | + | chr8.2:2071507-2071526 | None:intergenic | 45.0% | |
| CGAAGAGGAGATAGTTACTC+CGG | - | chr8.2:2074142-2074161 | MS.gene061275:CDS | 45.0% | |
| CGTGTGTTTCTTGAACAGGA+GGG | + | chr8.2:2073001-2073020 | None:intergenic | 45.0% | |
| CTCATCCATCGAAATCTCTG+AGG | + | chr8.2:2073027-2073046 | None:intergenic | 45.0% | |
| CTGAGAAACTTCTTCGCATG+GGG | + | chr8.2:2071506-2071525 | None:intergenic | 45.0% | |
| GAAAGAAAATCCTTGCGGAG+AGG | - | chr8.2:2071875-2071894 | MS.gene061275:CDS | 45.0% | |
| GAAGCCTAAGATTGGATCTG+AGG | - | chr8.2:2073757-2073776 | MS.gene061275:CDS | 45.0% | |
| GACACAGATGCTGCAATTAG+AGG | - | chr8.2:2073584-2073603 | MS.gene061275:CDS | 45.0% | |
| GAGGAATCAGCATCAACAAG+AGG | + | chr8.2:2072300-2072319 | None:intergenic | 45.0% | |
| GAGGAATGTGCCTGTAGAAA+TGG | - | chr8.2:2073811-2073830 | MS.gene061275:CDS | 45.0% | |
| GATACCTGAAGGACTATTGG+CGG | + | chr8.2:2071592-2071611 | None:intergenic | 45.0% | |
| GATCTCTGCTTCCTTCAAGA+TGG | - | chr8.2:2071840-2071859 | MS.gene061275:CDS | 45.0% | |
| GCAACGTGTGTTTCTTGAAC+AGG | + | chr8.2:2073005-2073024 | None:intergenic | 45.0% | |
| TACTTTGGTAGAACCAGAGC+AGG | - | chr8.2:2073310-2073329 | MS.gene061275:CDS | 45.0% | |
| TCAGTCTGATGAATCCCAGA+AGG | - | chr8.2:2072461-2072480 | MS.gene061275:CDS | 45.0% | |
| TCCTGAGAAACTTCTTCGCA+TGG | + | chr8.2:2071508-2071527 | None:intergenic | 45.0% | |
| TCTGTGGAGAAGCCTAAGAT+TGG | - | chr8.2:2073749-2073768 | MS.gene061275:CDS | 45.0% | |
| TTGAAGGAAGCAGAGATCGT+CGG | + | chr8.2:2071838-2071857 | None:intergenic | 45.0% | |
| TTGTTGTCGGAAGAAGGAGT+AGG | + | chr8.2:2071907-2071926 | None:intergenic | 45.0% | |
| ! | GAATCTGAGGAAGTGCACAA+TGG | - | chr8.2:2073149-2073168 | MS.gene061275:CDS | 45.0% |
| ! | GCAGGTACGGTTTTTATTGC+AGG | - | chr8.2:2073671-2073690 | MS.gene061275:CDS | 45.0% |
| ! | GTTGATTTCGATGTTGCAGC+TGG | + | chr8.2:2071799-2071818 | None:intergenic | 45.0% |
| ! | TTTTAAGCTTAGTCCAGCCG+CGG | - | chr8.2:2072236-2072255 | MS.gene061275:CDS | 45.0% |
| ! | TTTTCACCGCGACCAAAGAT+AGG | + | chr8.2:2072960-2072979 | None:intergenic | 45.0% |
| !! | CTATACTTGCTGCTTTGTGC+AGG | - | chr8.2:2073653-2073672 | MS.gene061275:CDS | 45.0% |
| !! | GCGGCTTTGGTTTGTAATGA+AGG | + | chr8.2:2072374-2072393 | None:intergenic | 45.0% |
| ACCCATGGAGTAGTCAGAAG+AGG | + | chr8.2:2073969-2073988 | None:intergenic | 50.0% | |
| ATCCCAGAAGGAATCATCGG+AGG | - | chr8.2:2072473-2072492 | MS.gene061275:CDS | 50.0% | |
| CAGAAGGAGACCAAACACCA+AGG | - | chr8.2:2073360-2073379 | MS.gene061275:CDS | 50.0% | |
| CAGACTCACAACTCGGAAAG+AGG | + | chr8.2:2072014-2072033 | None:intergenic | 50.0% | |
| CAGAGTCCTATCTTTGGTCG+CGG | - | chr8.2:2072951-2072970 | MS.gene061275:CDS | 50.0% | |
| CAGCTGATATTCCCACTGCT+TGG | + | chr8.2:2073565-2073584 | None:intergenic | 50.0% | |
| CATCCTCCGATGATTCCTTC+TGG | + | chr8.2:2072479-2072498 | None:intergenic | 50.0% | |
| CCAACCACGTCCATTTCTAC+AGG | + | chr8.2:2073824-2073843 | None:intergenic | 50.0% | |
| CCCATGCGAAGAAGTTTCTC+AGG | - | chr8.2:2071504-2071523 | MS.gene061275:intron | 50.0% | |
| CCCCAGATAAGCCATCTATG+AGG | - | chr8.2:2073792-2073811 | MS.gene061275:CDS | 50.0% | |
| CCTGTAGAAATGGACGTGGT+TGG | - | chr8.2:2073821-2073840 | MS.gene061275:CDS | 50.0% | |
| CGTTGCCTCAGAGATTTCGA+TGG | - | chr8.2:2073019-2073038 | MS.gene061275:CDS | 50.0% | |
| GCCTCTTCTGACTACTCCAT+GGG | - | chr8.2:2073965-2073984 | MS.gene061275:intron | 50.0% | |
| GGGGATTTGTCGTTGTTGAG+AGG | + | chr8.2:2071432-2071451 | None:intergenic | 50.0% | |
| TCCATAGGATGGTGAACCCA+TGG | + | chr8.2:2073984-2074003 | None:intergenic | 50.0% | |
| TCCATGGGTTCACCATCCTA+TGG | - | chr8.2:2073980-2073999 | MS.gene061275:intron | 50.0% | |
| TCTGGCAAGAGAGTCCTAAC+AGG | + | chr8.2:2072555-2072574 | None:intergenic | 50.0% | |
| TGTGCCTGTAGAAATGGACG+TGG | - | chr8.2:2073817-2073836 | MS.gene061275:CDS | 50.0% | |
| TTACCACAGGAGAGAGTCGT+TGG | - | chr8.2:2073943-2073962 | MS.gene061275:intron | 50.0% | |
| ! | ATCTAGGGTTAGCGGCAATG+AGG | + | chr8.2:2071551-2071570 | None:intergenic | 50.0% |
| ! | TCTAGGGTTAGCGGCAATGA+GGG | + | chr8.2:2071550-2071569 | None:intergenic | 50.0% |
| !! | AAAAGCGCCGGAATTACCAC+AGG | - | chr8.2:2073930-2073949 | MS.gene061275:intron | 50.0% |
| !! | CTTGCTGCTTTGTGCAGGTA+CGG | - | chr8.2:2073658-2073677 | MS.gene061275:CDS | 50.0% |
| !! | GATCATCAGCCCTTGGTGTT+TGG | + | chr8.2:2073373-2073392 | None:intergenic | 50.0% |
| ACACACGGATGACCAAGCAG+TGG | - | chr8.2:2073550-2073569 | MS.gene061275:CDS | 55.0% | |
| ACCAGAGCAGGCTTTGCAAC+TGG | - | chr8.2:2073322-2073341 | MS.gene061275:CDS | 55.0% | |
| ACCAGTTGCAAAGCCTGCTC+TGG | + | chr8.2:2073326-2073345 | None:intergenic | 55.0% | |
| ACTCCCGCCAATAGTCCTTC+AGG | - | chr8.2:2071585-2071604 | MS.gene061275:intron | 55.0% | |
| AGAAACTGGAGGAGTAGCCG+CGG | + | chr8.2:2072256-2072275 | None:intergenic | 55.0% | |
| AGGGTCATAAGGTGGCACAG+AGG | + | chr8.2:2072319-2072338 | None:intergenic | 55.0% | |
| CACACGGATGACCAAGCAGT+GGG | - | chr8.2:2073551-2073570 | MS.gene061275:CDS | 55.0% | |
| CGCGGGCCAATCTACTACTT+TGG | - | chr8.2:2073295-2073314 | MS.gene061275:CDS | 55.0% | |
| CGGTGACTCAGCCATCTTGA+AGG | + | chr8.2:2071854-2071873 | None:intergenic | 55.0% | |
| CTCCGGTTAGGCGTTCAAGT+AGG | - | chr8.2:2074159-2074178 | MS.gene061275:CDS | 55.0% | |
| GCTGGCGATCTAACCTTTGC+CGG | + | chr8.2:2071781-2071800 | None:intergenic | 55.0% | |
| GGAATTGTGGCCTAGGGGAT+AGG | + | chr8.2:2072353-2072372 | None:intergenic | 55.0% | |
| GGCCTCTTCTGACTACTCCA+TGG | - | chr8.2:2073964-2073983 | MS.gene061275:intron | 55.0% | |
| TCCAACACAGCATGAGACCC+TGG | + | chr8.2:2072693-2072712 | None:intergenic | 55.0% | |
| TCCAGGGTCTCATGCTGTGT+TGG | - | chr8.2:2072689-2072708 | MS.gene061275:CDS | 55.0% | |
| TTTATAGGGACGCGGCGAAG+AGG | - | chr8.2:2074127-2074146 | MS.gene061275:CDS | 55.0% | |
| ! | CCAGCGTAGAGAAAAAGCGC+CGG | - | chr8.2:2073918-2073937 | MS.gene061275:intron | 55.0% |
| !! | AGAGTCTGAGGAAGCACTCG+CGG | - | chr8.2:2073277-2073296 | MS.gene061275:CDS | 55.0% |
| AGGCCAACGACTCTCTCCTG+TGG | + | chr8.2:2073949-2073968 | None:intergenic | 60.0% | |
| TAGGCTCGTTCCTCTCCGCA+AGG | + | chr8.2:2071888-2071907 | None:intergenic | 60.0% | |
| ! | GGGTTAGCGGCAATGAGGGA+AGG | + | chr8.2:2071546-2071565 | None:intergenic | 60.0% |
| !! | GAGTCTGAGGAAGCACTCGC+GGG | - | chr8.2:2073278-2073297 | MS.gene061275:CDS | 60.0% |
| !!! | CCGGCGCTTTTTCTCTACGC+TGG | + | chr8.2:2073921-2073940 | None:intergenic | 60.0% |
| ACTGGAGGAGTAGCCGCGGC+TGG | + | chr8.2:2072252-2072271 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 2071426 | 2074211 | 2071426 | ID=MS.gene061275 |
| chr8.2 | mRNA | 2071426 | 2074211 | 2071426 | ID=MS.gene061275.t1;Parent=MS.gene061275 |
| chr8.2 | exon | 2074031 | 2074211 | 2074031 | ID=MS.gene061275.t1.exon1;Parent=MS.gene061275.t1 |
| chr8.2 | CDS | 2074031 | 2074211 | 2074031 | ID=cds.MS.gene061275.t1;Parent=MS.gene061275.t1 |
| chr8.2 | exon | 2071604 | 2073918 | 2071604 | ID=MS.gene061275.t1.exon2;Parent=MS.gene061275.t1 |
| chr8.2 | CDS | 2071604 | 2073918 | 2071604 | ID=cds.MS.gene061275.t1;Parent=MS.gene061275.t1 |
| chr8.2 | exon | 2071426 | 2071503 | 2071426 | ID=MS.gene061275.t1.exon3;Parent=MS.gene061275.t1 |
| chr8.2 | CDS | 2071426 | 2071503 | 2071426 | ID=cds.MS.gene061275.t1;Parent=MS.gene061275.t1 |
| Gene Sequence |
| Protein sequence |
