Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062556.t1 | XP_003606457.2 | 98.3 | 232 | 4 | 0 | 1 | 232 | 1 | 232 | 2.70E-130 | 474.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062556.t1 | Q7DLR9 | 83.7 | 227 | 37 | 0 | 6 | 232 | 20 | 246 | 2.8e-115 | 416.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062556.t1 | G7JQG4 | 98.3 | 232 | 4 | 0 | 1 | 232 | 1 | 232 | 2.0e-130 | 474.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062556.t1 | MTR_4g060540 | 98.276 | 232 | 4 | 0 | 1 | 232 | 1 | 232 | 2.06e-173 | 476 |
| MS.gene062556.t1 | MTR_6g084450 | 91.379 | 232 | 20 | 0 | 1 | 232 | 1 | 232 | 2.28e-163 | 451 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062556.t1 | AT1G56450 | 83.700 | 227 | 37 | 0 | 6 | 232 | 20 | 246 | 1.28e-149 | 416 |
Find 70 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGGAAACATTCCCTTAT+TGG | 0.168463 | 4.3:-41841759 | MS.gene062556:CDS |
| GATTCTCATGGCTTCTGATA+TGG | 0.255390 | 4.3:-41842784 | MS.gene062556:CDS |
| TGAGGAAGGTGTTAGGTTAC+TGG | 0.271577 | 4.3:-41841135 | MS.gene062556:CDS |
| TTTCTCCACTGGCACCAATA+AGG | 0.276380 | 4.3:+41841745 | None:intergenic |
| TTCTCCACTGGCACCAATAA+GGG | 0.339803 | 4.3:+41841746 | None:intergenic |
| TAACTCGGGTGATGTATAAT+AGG | 0.358277 | 4.3:-41841426 | MS.gene062556:CDS |
| GTTGAGCGGGTGAAGCCTAT+TGG | 0.380343 | 4.3:-41841777 | MS.gene062556:CDS |
| TTGTGGAACTCCCTTGTACT+TGG | 0.381836 | 4.3:-41841385 | MS.gene062556:CDS |
| ATAAGGGAATGTTTCCCAAT+AGG | 0.385721 | 4.3:+41841762 | None:intergenic |
| AAATAGTTGTGCACCTCCTT+AGG | 0.402257 | 4.3:+41841448 | None:intergenic |
| TAAGCTTTGAGGAAGGTGTT+AGG | 0.415164 | 4.3:-41841142 | MS.gene062556:CDS |
| ATTCTCATGGCTTCTGATAT+GGG | 0.417780 | 4.3:-41842783 | MS.gene062556:CDS |
| AATATACTGATAGGTTCCTA+TGG | 0.426575 | 4.3:-41841822 | MS.gene062556:intron |
| TTGAGCGGGTGAAGCCTATT+GGG | 0.432842 | 4.3:-41841776 | MS.gene062556:CDS |
| TTTAGGTATCCTTATGTGAC+TGG | 0.434414 | 4.3:-41842840 | MS.gene062556:intron |
| GCATGAAAATTTAAGCTTTG+AGG | 0.455532 | 4.3:-41841153 | MS.gene062556:CDS |
| GAAGATGACCACATAGCTAC+TGG | 0.459759 | 4.3:-41841218 | MS.gene062556:CDS |
| TGCCACTCATCACGAAGAAT+CGG | 0.486184 | 4.3:+41841173 | None:intergenic |
| TGGAACTCCCTTGTACTTGG+TGG | 0.487933 | 4.3:-41841382 | MS.gene062556:CDS |
| GTCTGCTGTCAACAAGATAC+AGG | 0.491598 | 4.3:-41841078 | MS.gene062556:intron |
| AAAATCACTTATTTCTCCAC+TGG | 0.494634 | 4.3:+41841734 | None:intergenic |
| CTTATTCAGGTTAACATGAT+CGG | 0.498397 | 4.3:-41841251 | MS.gene062556:intron |
| GTTGCTATTAAATACAAAGA+TGG | 0.506960 | 4.3:-41842807 | MS.gene062556:CDS |
| ATGACAACATGTGGGATGAC+GGG | 0.507953 | 4.3:-41841483 | MS.gene062556:CDS |
| TTGCTATTAAATACAAAGAT+GGG | 0.508049 | 4.3:-41842806 | MS.gene062556:CDS |
| TCTTCACACCACCAAGTACA+AGG | 0.508905 | 4.3:+41841374 | None:intergenic |
| ATAGCTAAAATGACTGAAGA+AGG | 0.510679 | 4.3:-41838925 | MS.gene062556:CDS |
| GTACTTGGTGGTGTGAAGAA+TGG | 0.513027 | 4.3:-41841370 | MS.gene062556:CDS |
| TACTTGGTGGTGTGAAGAAT+GGG | 0.515172 | 4.3:-41841369 | MS.gene062556:CDS |
| ACAGAGGATCCAGTCACATA+AGG | 0.515515 | 4.3:+41842831 | None:intergenic |
| AATCCCACAGTTGGTGCTGA+AGG | 0.522601 | 4.3:-41838844 | MS.gene062556:CDS |
| TGGGATGACGGGAATTCTCT+AGG | 0.530096 | 4.3:-41841472 | MS.gene062556:CDS |
| CGGGAATTCTCTAGGACCTA+AGG | 0.530833 | 4.3:-41841464 | MS.gene062556:CDS |
| AATGACAACATGTGGGATGA+CGG | 0.531071 | 4.3:-41841484 | MS.gene062556:CDS |
| CAGTTGGTGCTGAAGGTTCG+TGG | 0.538915 | 4.3:-41838837 | MS.gene062556:CDS |
| CATTCCCTTATTGGTGCCAG+TGG | 0.542882 | 4.3:-41841750 | MS.gene062556:CDS |
| ATACAAAGATGGGATTCTCA+TGG | 0.559607 | 4.3:-41842796 | MS.gene062556:CDS |
| GAAAATTTAAGCTTTGAGGA+AGG | 0.566096 | 4.3:-41841149 | MS.gene062556:CDS |
| GCGATACAAGAGTGTTGAGC+GGG | 0.569229 | 4.3:-41841790 | MS.gene062556:CDS |
| CATCCCACATGTTGTCATTG+AGG | 0.570599 | 4.3:+41841488 | None:intergenic |
| GCTTTCAAGAATCCCACAGT+TGG | 0.572715 | 4.3:-41838853 | MS.gene062556:CDS |
| GGCCGATTCTTCGTGATGAG+TGG | 0.581874 | 4.3:-41841175 | MS.gene062556:CDS |
| GTAACAAGTTCAACCCTTTG+TGG | 0.588106 | 4.3:-41841402 | MS.gene062556:CDS |
| AGGTGCACAACTATTTAACT+CGG | 0.589584 | 4.3:-41841441 | MS.gene062556:CDS |
| GTACAAGGGAGTTCCACAAA+GGG | 0.594100 | 4.3:+41841389 | None:intergenic |
| GGCTAGGAAATCATCTTGCT+AGG | 0.594955 | 4.3:-41841196 | MS.gene062556:CDS |
| GACCACATAGCTACTGGGCT+AGG | 0.599628 | 4.3:-41841212 | MS.gene062556:CDS |
| ACACTCTTGTATCGCAGAGT+AGG | 0.601262 | 4.3:+41841798 | None:intergenic |
| ATATACTGATAGGTTCCTAT+GGG | 0.602714 | 4.3:-41841821 | MS.gene062556:intron |
| CGAACCTTCAGCACCAACTG+TGG | 0.603921 | 4.3:+41838840 | None:intergenic |
| GGTTCTCTGTGATTCAGCTA+CGG | 0.612448 | 4.3:+41843026 | None:intergenic |
| TTCCTAGCCCAGTAGCTATG+TGG | 0.613136 | 4.3:+41841210 | None:intergenic |
| GTATCGCAGAGTAGGCCCAT+AGG | 0.616930 | 4.3:+41841806 | None:intergenic |
| AAGATGACCACATAGCTACT+GGG | 0.624683 | 4.3:-41841217 | MS.gene062556:CDS |
| AGCCAAGGCCTACCGTGCCG+AGG | 0.632061 | 4.3:+41841338 | None:intergenic |
| AGTACAAGGGAGTTCCACAA+AGG | 0.649488 | 4.3:+41841388 | None:intergenic |
| TTATGTGACTGGATCCTCTG+TGG | 0.651498 | 4.3:-41842829 | MS.gene062556:CDS |
| CTCATGGCTTCTGATATGGG+AGG | 0.651719 | 4.3:-41842780 | MS.gene062556:intron |
| GAACCTTCAGCACCAACTGT+GGG | 0.652084 | 4.3:+41838841 | None:intergenic |
| TAAGCTCGTCGAGGTAACGT+TGG | 0.657412 | 4.3:+41841703 | None:intergenic |
| AAGAATGGGCAAAAGTACCT+CGG | 0.660319 | 4.3:-41841355 | MS.gene062556:CDS |
| TGCGATACAAGAGTGTTGAG+CGG | 0.664038 | 4.3:-41841791 | MS.gene062556:CDS |
| GGTGCACAACTATTTAACTC+GGG | 0.664085 | 4.3:-41841440 | MS.gene062556:CDS |
| CTTCACACCACCAAGTACAA+GGG | 0.675705 | 4.3:+41841375 | None:intergenic |
| GAATTCTCTAGGACCTAAGG+AGG | 0.683114 | 4.3:-41841461 | MS.gene062556:CDS |
| TGGGCAAAAGTACCTCGGCA+CGG | 0.687461 | 4.3:-41841350 | MS.gene062556:intron |
| GTAGCCTCAATGACAACATG+TGG | 0.690284 | 4.3:-41841492 | MS.gene062556:intron |
| AGACTTACATAAGCTCGTCG+AGG | 0.707039 | 4.3:+41841694 | None:intergenic |
| TAGCCTCAATGACAACATGT+GGG | 0.733746 | 4.3:-41841491 | MS.gene062556:CDS |
| GTATTTAATAGCAACCACAG+AGG | 0.775432 | 4.3:+41842815 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAAATAATAAT+TGG | + | chr4.3:41839382-41839401 | None:intergenic | 0.0% |
| !! | ATCTTAAATTTACAATTATT+AGG | - | chr4.3:41841048-41841067 | MS.gene062556:intron | 10.0% |
| !! | TCTTAAATTTACAATTATTA+GGG | - | chr4.3:41841049-41841068 | MS.gene062556:intron | 10.0% |
| !! | TTAAAAGTAACAATTTATAA+AGG | + | chr4.3:41842844-41842863 | None:intergenic | 10.0% |
| !! | AAGATAAAGACAATAAAATT+TGG | - | chr4.3:41840211-41840230 | MS.gene062556:intron | 15.0% |
| !! | AATTCTTTAATAAGATGTAA+GGG | - | chr4.3:41840892-41840911 | MS.gene062556:intron | 15.0% |
| !! | TAATTCTTTAATAAGATGTA+AGG | - | chr4.3:41840891-41840910 | MS.gene062556:intron | 15.0% |
| !! | TTTCCAAATGAAAAATAAAT+TGG | + | chr4.3:41841326-41841345 | None:intergenic | 15.0% |
| !!! | AAACCAATTTATTTTTCATT+TGG | - | chr4.3:41841320-41841339 | MS.gene062556:intron | 15.0% |
| !!! | ATTAGCTTTTAAATAAGTTT+AGG | - | chr4.3:41839193-41839212 | MS.gene062556:intron | 15.0% |
| !! | AATTGAAACAGAAAAAGATA+TGG | + | chr4.3:41842606-41842625 | None:intergenic | 20.0% |
| !! | ATAATGAAAATACTCTCTAA+AGG | - | chr4.3:41842276-41842295 | MS.gene062556:intron | 20.0% |
| !! | ATTGAAAGAAAATAAAACAC+TGG | + | chr4.3:41839814-41839833 | None:intergenic | 20.0% |
| !! | GTCTAAATTAAAAAACAGAA+AGG | - | chr4.3:41840958-41840977 | MS.gene062556:intron | 20.0% |
| !! | TAAAAATAAGTCAATCCAAA+CGG | + | chr4.3:41839154-41839173 | None:intergenic | 20.0% |
| !! | TAAAAATCAAACCAACATTT+AGG | + | chr4.3:41839011-41839030 | None:intergenic | 20.0% |
| !! | TAATGAAAATACTCTCTAAA+GGG | - | chr4.3:41842277-41842296 | MS.gene062556:intron | 20.0% |
| !! | TGTATTTATGAATCTTATTC+AGG | - | chr4.3:41840603-41840622 | MS.gene062556:intron | 20.0% |
| !!! | AACTTGTTTTAAGAGAAAAT+TGG | - | chr4.3:41841541-41841560 | MS.gene062556:intron | 20.0% |
| !!! | CAAATTAACACAACTATTTT+TGG | + | chr4.3:41839754-41839773 | None:intergenic | 20.0% |
| !!! | TAAATGTTGGTTTGATTTTT+AGG | - | chr4.3:41839010-41839029 | MS.gene062556:intron | 20.0% |
| !!! | TTGCTATTAAATACAAAGAT+GGG | - | chr4.3:41839061-41839080 | MS.gene062556:intron | 20.0% |
| !!! | TTTTCAATTTACTCAGTTTA+TGG | - | chr4.3:41838920-41838939 | MS.gene062556:CDS | 20.0% |
| ! | AAAAAGTAATAGTAGTACAC+TGG | - | chr4.3:41841883-41841902 | MS.gene062556:intron | 25.0% |
| ! | AAGCACTTCATTAACTAATT+TGG | + | chr4.3:41839573-41839592 | None:intergenic | 25.0% |
| ! | AATCGAAATATCATGATGTA+TGG | - | chr4.3:41840981-41841000 | MS.gene062556:intron | 25.0% |
| ! | AGTTCAAAATCAACACTTAA+AGG | + | chr4.3:41840346-41840365 | None:intergenic | 25.0% |
| ! | ATTCTCGTTAAAAACATACT+GGG | - | chr4.3:41842983-41843002 | MS.gene062556:intron | 25.0% |
| ! | CAAAATAAAAAGAAAAGCCA+AGG | + | chr4.3:41840547-41840566 | None:intergenic | 25.0% |
| ! | GGACTATAATATAACAGAAT+GGG | - | chr4.3:41842298-41842317 | MS.gene062556:intron | 25.0% |
| ! | GTAATATCCAACATAAAAGA+AGG | + | chr4.3:41839862-41839881 | None:intergenic | 25.0% |
| ! | GTTCAAAATCAACACTTAAA+GGG | + | chr4.3:41840345-41840364 | None:intergenic | 25.0% |
| ! | TCTCTTAATTTCATCTTGTA+AGG | - | chr4.3:41842566-41842585 | MS.gene062556:intron | 25.0% |
| ! | TGCATATTGAATATACTGAT+AGG | - | chr4.3:41840036-41840055 | MS.gene062556:intron | 25.0% |
| ! | TTCAATCCCAAATAAAGAAA+AGG | + | chr4.3:41841458-41841477 | None:intergenic | 25.0% |
| !! | ATGTTTTCCTTCTTTTATGT+TGG | - | chr4.3:41839852-41839871 | MS.gene062556:intron | 25.0% |
| !! | GATAATGATCGTTTATTTCT+TGG | - | chr4.3:41841231-41841250 | MS.gene062556:CDS | 25.0% |
| !! | GTTGCTATTAAATACAAAGA+TGG | - | chr4.3:41839060-41839079 | MS.gene062556:intron | 25.0% |
| !! | TTGAAATATACACTCAGTTT+TGG | - | chr4.3:41840936-41840955 | MS.gene062556:intron | 25.0% |
| !! | TTTGAAATTGACCTAAATGT+TGG | - | chr4.3:41838997-41839016 | MS.gene062556:intron | 25.0% |
| !!! | AGTTATTTTCTATGCAATTG+AGG | + | chr4.3:41840864-41840883 | None:intergenic | 25.0% |
| !!! | GTTATTTTCTATGCAATTGA+GGG | + | chr4.3:41840863-41840882 | None:intergenic | 25.0% |
| !!! | TAAGTGTTGATTTTGAACTT+TGG | - | chr4.3:41840347-41840366 | MS.gene062556:intron | 25.0% |
| !!! | TAATTTCATGCAGTTTGTTT+TGG | - | chr4.3:41841672-41841691 | MS.gene062556:intron | 25.0% |
| !!! | TTAGTCAATTGATTTGCATT+TGG | - | chr4.3:41840234-41840253 | MS.gene062556:intron | 25.0% |
| !!! | TTTTAACTGTAAATGTAACC+AGG | + | chr4.3:41842642-41842661 | None:intergenic | 25.0% |
| AATATACTGATAGGTTCCTA+TGG | - | chr4.3:41840045-41840064 | MS.gene062556:intron | 30.0% | |
| AGCCTCAAATATTTGCTTAA+CGG | + | chr4.3:41841580-41841599 | None:intergenic | 30.0% | |
| AGGTTATTTGCAAAACTAAC+TGG | - | chr4.3:41841950-41841969 | MS.gene062556:intron | 30.0% | |
| ATAGCTAAAATGACTGAAGA+AGG | - | chr4.3:41842942-41842961 | MS.gene062556:intron | 30.0% | |
| ATATACTGATAGGTTCCTAT+GGG | - | chr4.3:41840046-41840065 | MS.gene062556:intron | 30.0% | |
| CAAATATTTGCTTAACGGAA+AGG | + | chr4.3:41841575-41841594 | None:intergenic | 30.0% | |
| CATTCTCGTTAAAAACATAC+TGG | - | chr4.3:41842982-41843001 | MS.gene062556:intron | 30.0% | |
| CTAAAACTCATTAACCACTA+AGG | + | chr4.3:41839599-41839618 | None:intergenic | 30.0% | |
| GAAAAAGATATGGTTAGAGT+CGG | + | chr4.3:41842596-41842615 | None:intergenic | 30.0% | |
| GAATAAGTGAAATGTGCAAA+GGG | + | chr4.3:41839346-41839365 | None:intergenic | 30.0% | |
| GAATTAGGAATTAAACCATG+AGG | - | chr4.3:41842122-41842141 | MS.gene062556:intron | 30.0% | |
| GCAATTTCAAACCTTACTTT+GGG | - | chr4.3:41839128-41839147 | MS.gene062556:intron | 30.0% | |
| GCATGAAAATTTAAGCTTTG+AGG | - | chr4.3:41840714-41840733 | MS.gene062556:intron | 30.0% | |
| GGGACTATAATATAACAGAA+TGG | - | chr4.3:41842297-41842316 | MS.gene062556:intron | 30.0% | |
| TAAAAGCAGTTTAACTAGTG+AGG | - | chr4.3:41841406-41841425 | MS.gene062556:CDS | 30.0% | |
| TACGAAAAAAATGTCACTAC+CGG | - | chr4.3:41841789-41841808 | MS.gene062556:CDS | 30.0% | |
| TATAGAATCCTTACTGTACA+AGG | - | chr4.3:41841709-41841728 | MS.gene062556:CDS | 30.0% | |
| TATATTTCAACAACCTCCAT+AGG | + | chr4.3:41840926-41840945 | None:intergenic | 30.0% | |
| TATGTTGGATATTACACTCT+TGG | - | chr4.3:41839867-41839886 | MS.gene062556:intron | 30.0% | |
| TCTCTAGTAAATTCATTCGT+TGG | - | chr4.3:41838888-41838907 | MS.gene062556:CDS | 30.0% | |
| TCTGTGTTAGTTAATGAAGT+GGG | - | chr4.3:41839422-41839441 | MS.gene062556:intron | 30.0% | |
| TCTTAATACTCTGATTCCTA+GGG | + | chr4.3:41839731-41839750 | None:intergenic | 30.0% | |
| TGAATAAGTGAAATGTGCAA+AGG | + | chr4.3:41839347-41839366 | None:intergenic | 30.0% | |
| TGCAATTTCAAACCTTACTT+TGG | - | chr4.3:41839127-41839146 | MS.gene062556:intron | 30.0% | |
| TTCCGTTAAGCAAATATTTG+AGG | - | chr4.3:41841575-41841594 | MS.gene062556:intron | 30.0% | |
| TTCTGTGTTAGTTAATGAAG+TGG | - | chr4.3:41839421-41839440 | MS.gene062556:intron | 30.0% | |
| TTGGCTTATTGTTGAGATTA+TGG | + | chr4.3:41839313-41839332 | None:intergenic | 30.0% | |
| ! | AAAAAGATGGAGGATTTTTG+AGG | - | chr4.3:41841512-41841531 | MS.gene062556:intron | 30.0% |
| ! | AAAATCACTTATTTCTCCAC+TGG | + | chr4.3:41840136-41840155 | None:intergenic | 30.0% |
| ! | AAAATCAGCCCAATATTTTC+CGG | + | chr4.3:41839999-41840018 | None:intergenic | 30.0% |
| ! | AATCTGAAATAACTGAGTTG+CGG | + | chr4.3:41840305-41840324 | None:intergenic | 30.0% |
| ! | AGAGAGATAGACACATATTT+TGG | - | chr4.3:41842426-41842445 | MS.gene062556:intron | 30.0% |
| ! | AGGATAAGGTGAATCTTTTT+GGG | - | chr4.3:41842209-41842228 | MS.gene062556:intron | 30.0% |
| ! | ATTGGATTTTAAATCCACTC+CGG | - | chr4.3:41841985-41842004 | MS.gene062556:intron | 30.0% |
| ! | CTTATTCAGGTTAACATGAT+CGG | - | chr4.3:41840616-41840635 | MS.gene062556:intron | 30.0% |
| ! | TGGAGAAATAAGTGATTTTC+AGG | - | chr4.3:41840137-41840156 | MS.gene062556:intron | 30.0% |
| ! | TGTGGTTTGTCAATGAAATT+TGG | - | chr4.3:41841196-41841215 | MS.gene062556:CDS | 30.0% |
| ! | TTTATTTCTTGGTTTCTGCT+AGG | - | chr4.3:41841242-41841261 | MS.gene062556:CDS | 30.0% |
| ! | TTTCATCAGTTTTTCACTTG+TGG | - | chr4.3:41841178-41841197 | MS.gene062556:CDS | 30.0% |
| ! | TTTTTCTGTTGGTACAATCT+TGG | - | chr4.3:41842791-41842810 | MS.gene062556:CDS | 30.0% |
| !! | ATATTTTGGAAAGACAGAGA+TGG | - | chr4.3:41842440-41842459 | MS.gene062556:intron | 30.0% |
| !! | ATGGAACTTTAAAGCTCTAA+GGG | - | chr4.3:41841920-41841939 | MS.gene062556:intron | 30.0% |
| !! | ATGGCACCTTTTCTTTATTT+GGG | - | chr4.3:41841449-41841468 | MS.gene062556:CDS | 30.0% |
| !! | CAGTATGTTTTTAACGAGAA+TGG | + | chr4.3:41842984-41843003 | None:intergenic | 30.0% |
| !! | CATTTCTTAGCTTTTTCTGT+TGG | - | chr4.3:41842780-41842799 | MS.gene062556:intron | 30.0% |
| !! | GAAAATTTAAGCTTTGAGGA+AGG | - | chr4.3:41840718-41840737 | MS.gene062556:intron | 30.0% |
| !! | TAAAAGTATCGAGCATATGT+AGG | + | chr4.3:41842065-41842084 | None:intergenic | 30.0% |
| !! | TATGTTTTTAACGAGAATGG+CGG | + | chr4.3:41842981-41843000 | None:intergenic | 30.0% |
| !!! | CAATTCAGTTTTTGTTTTCC+TGG | - | chr4.3:41842621-41842640 | MS.gene062556:intron | 30.0% |
| !!! | CGGTTAATGAGTTTTAGTTA+AGG | - | chr4.3:41839455-41839474 | MS.gene062556:intron | 30.0% |
| !!! | TGGTTAATGAGTTTTAGTTG+AGG | - | chr4.3:41839602-41839621 | MS.gene062556:intron | 30.0% |
| AAAAAAGGTCCCTAGTAATC+CGG | + | chr4.3:41839707-41839726 | None:intergenic | 35.0% | |
| AAAACTAACTGGAAGATGAG+AGG | - | chr4.3:41841961-41841980 | MS.gene062556:intron | 35.0% | |
| AAACTAACTGGAAGATGAGA+GGG | - | chr4.3:41841962-41841981 | MS.gene062556:intron | 35.0% | |
| AAAGATTCACCTTATCCTCA+AGG | + | chr4.3:41842207-41842226 | None:intergenic | 35.0% | |
| AAATTATTCTACCCGTGCAA+AGG | + | chr4.3:41841658-41841677 | None:intergenic | 35.0% | |
| AACAATAAGCCAATCCAAAC+GGG | - | chr4.3:41839320-41839339 | MS.gene062556:intron | 35.0% | |
| AATTTACTAGAGAGAGAGAG+AGG | + | chr4.3:41838881-41838900 | None:intergenic | 35.0% | |
| AGAGAGCAAAAGAAACCTAA+AGG | + | chr4.3:41842551-41842570 | None:intergenic | 35.0% | |
| AGCAAAACACTATCACAAAC+CGG | + | chr4.3:41841811-41841830 | None:intergenic | 35.0% | |
| AGCATCTGAGTTCAATATCT+GGG | - | chr4.3:41839492-41839511 | MS.gene062556:intron | 35.0% | |
| AGGTGCACAACTATTTAACT+CGG | - | chr4.3:41840426-41840445 | MS.gene062556:intron | 35.0% | |
| ATAAGGGAATGTTTCCCAAT+AGG | + | chr4.3:41840108-41840127 | None:intergenic | 35.0% | |
| ATACAAAGATGGGATTCTCA+TGG | - | chr4.3:41839071-41839090 | MS.gene062556:intron | 35.0% | |
| ATATAACAGAATGGGACACA+TGG | - | chr4.3:41842306-41842325 | MS.gene062556:intron | 35.0% | |
| ATGTAGGCTTTCAAGGAATT+AGG | - | chr4.3:41842107-41842126 | MS.gene062556:intron | 35.0% | |
| ATTCTCATGGCTTCTGATAT+GGG | - | chr4.3:41839084-41839103 | MS.gene062556:intron | 35.0% | |
| ATTGGGAAACATTCCCTTAT+TGG | - | chr4.3:41840108-41840127 | MS.gene062556:intron | 35.0% | |
| ATTTACTAGAGAGAGAGAGA+GGG | + | chr4.3:41838880-41838899 | None:intergenic | 35.0% | |
| CAACAATAAGCCAATCCAAA+CGG | - | chr4.3:41839319-41839338 | MS.gene062556:intron | 35.0% | |
| CAAGATCAAGAGAGAAGATA+AGG | - | chr4.3:41842403-41842422 | MS.gene062556:intron | 35.0% | |
| CTAAAACTCATTAACCGCAA+AGG | + | chr4.3:41839452-41839471 | None:intergenic | 35.0% | |
| CTTAATACTCTGATTCCTAG+GGG | + | chr4.3:41839730-41839749 | None:intergenic | 35.0% | |
| CTTGGTAAATTGTGATTCCT+TGG | - | chr4.3:41839885-41839904 | MS.gene062556:intron | 35.0% | |
| GAAGTATATTGCAATTGCGT+AGG | - | chr4.3:41841373-41841392 | MS.gene062556:CDS | 35.0% | |
| GAGAATCTGAGTTTGATATC+TGG | - | chr4.3:41839638-41839657 | MS.gene062556:intron | 35.0% | |
| GAGAATTTATTTGGCAGTGA+GGG | - | chr4.3:41842344-41842363 | MS.gene062556:intron | 35.0% | |
| GAGAGTGGTGAGAATTTATT+TGG | - | chr4.3:41842335-41842354 | MS.gene062556:intron | 35.0% | |
| GGATTCTATACTGTGTTATG+TGG | + | chr4.3:41841699-41841718 | None:intergenic | 35.0% | |
| GTATTTAATAGCAACCACAG+AGG | + | chr4.3:41839055-41839074 | None:intergenic | 35.0% | |
| GTCTTAATACTCTGATTCCT+AGG | + | chr4.3:41839732-41839751 | None:intergenic | 35.0% | |
| TAACTCGGGTGATGTATAAT+AGG | - | chr4.3:41840441-41840460 | MS.gene062556:intron | 35.0% | |
| TGAGAATTTATTTGGCAGTG+AGG | - | chr4.3:41842343-41842362 | MS.gene062556:intron | 35.0% | |
| TTTAGGTATCCTTATGTGAC+TGG | - | chr4.3:41839027-41839046 | MS.gene062556:intron | 35.0% | |
| TTTAGTTGAGGTCAGTTTGA+TGG | - | chr4.3:41839614-41839633 | MS.gene062556:intron | 35.0% | |
| ! | AAATCAGCCCAATATTTTCC+GGG | + | chr4.3:41839998-41840017 | None:intergenic | 35.0% |
| ! | ATTTGGGATTGAATCCTTCT+GGG | - | chr4.3:41841465-41841484 | MS.gene062556:CDS | 35.0% |
| ! | CATGGCACCTTTTCTTTATT+TGG | - | chr4.3:41841448-41841467 | MS.gene062556:CDS | 35.0% |
| ! | GAGGATAAGGTGAATCTTTT+TGG | - | chr4.3:41842208-41842227 | MS.gene062556:intron | 35.0% |
| ! | GATAAGGTGAATCTTTTTGG+GGG | - | chr4.3:41842211-41842230 | MS.gene062556:intron | 35.0% |
| ! | GGAATTATAAGGGTGTGTAA+CGG | - | chr4.3:41842365-41842384 | MS.gene062556:intron | 35.0% |
| ! | GGATAAGGTGAATCTTTTTG+GGG | - | chr4.3:41842210-41842229 | MS.gene062556:intron | 35.0% |
| ! | GTTAAGCAAATATTTGAGGC+TGG | - | chr4.3:41841579-41841598 | MS.gene062556:intron | 35.0% |
| ! | TATTTGGGATTGAATCCTTC+TGG | - | chr4.3:41841464-41841483 | MS.gene062556:CDS | 35.0% |
| ! | TTTTACTGCATTGGACCATT+AGG | - | chr4.3:41842080-41842099 | MS.gene062556:intron | 35.0% |
| !! | AAAGCTCTAAGGGTTATAGT+AGG | - | chr4.3:41841930-41841949 | MS.gene062556:intron | 35.0% |
| !! | AATAAAGAAAAGGTGCCATG+TGG | + | chr4.3:41841448-41841467 | None:intergenic | 35.0% |
| !! | AGCTTTAAAGTTCCATGACT+AGG | + | chr4.3:41841916-41841935 | None:intergenic | 35.0% |
| !! | ATAAAGAAAAGGTGCCATGT+GGG | + | chr4.3:41841447-41841466 | None:intergenic | 35.0% |
| !! | ATGTTTTTAACGAGAATGGC+GGG | + | chr4.3:41842980-41842999 | None:intergenic | 35.0% |
| !! | CATGGAACTTTAAAGCTCTA+AGG | - | chr4.3:41841919-41841938 | MS.gene062556:intron | 35.0% |
| !! | GCTATTTCTCATCTTCTGAT+AGG | + | chr4.3:41842699-41842718 | None:intergenic | 35.0% |
| AAAGACAGAGATGGAGAAAG+TGG | - | chr4.3:41842449-41842468 | MS.gene062556:intron | 40.0% | |
| AAAGCCTACATGACACCTAA+TGG | + | chr4.3:41842098-41842117 | None:intergenic | 40.0% | |
| AAATAGTTGTGCACCTCCTT+AGG | + | chr4.3:41840422-41840441 | None:intergenic | 40.0% | |
| AAATTCTCACCACTCTCCTA+AGG | + | chr4.3:41842332-41842351 | None:intergenic | 40.0% | |
| AAGATGACCACATAGCTACT+GGG | - | chr4.3:41840650-41840669 | MS.gene062556:intron | 40.0% | |
| AATGACAACATGTGGGATGA+CGG | - | chr4.3:41840383-41840402 | MS.gene062556:intron | 40.0% | |
| ACGTTAGTGGCAACCAAAAT+TGG | + | chr4.3:41842023-41842042 | None:intergenic | 40.0% | |
| ATCCAGATTCGAGGGATATT+GGG | - | chr4.3:41842485-41842504 | MS.gene062556:intron | 40.0% | |
| ATCTGAGTTCAATATCTGGG+TGG | - | chr4.3:41839495-41839514 | MS.gene062556:intron | 40.0% | |
| ATCTGAGTTTGATATCTGGC+TGG | - | chr4.3:41839642-41839661 | MS.gene062556:intron | 40.0% | |
| ATGCTTTCCTTTCCTTTGCA+CGG | - | chr4.3:41841643-41841662 | MS.gene062556:intron | 40.0% | |
| CCATTCTCCCGGAAAATATT+GGG | - | chr4.3:41839988-41840007 | MS.gene062556:intron | 40.0% | |
| CCTTACTGTACAAGGATTCA+AGG | - | chr4.3:41841717-41841736 | MS.gene062556:CDS | 40.0% | |
| CCTTGAATCCTTGTACAGTA+AGG | + | chr4.3:41841720-41841739 | None:intergenic | 40.0% | |
| GAGCATCTGAGTTCAATATC+TGG | - | chr4.3:41839491-41839510 | MS.gene062556:intron | 40.0% | |
| GATATCTGGCTGGAAATTCT+TGG | - | chr4.3:41839652-41839671 | MS.gene062556:intron | 40.0% | |
| GATTCTCATGGCTTCTGATA+TGG | - | chr4.3:41839083-41839102 | MS.gene062556:intron | 40.0% | |
| GGGATTAGAAAAATCCCAGA+AGG | + | chr4.3:41841482-41841501 | None:intergenic | 40.0% | |
| GGTGCACAACTATTTAACTC+GGG | - | chr4.3:41840427-41840446 | MS.gene062556:intron | 40.0% | |
| GTAACAAGTTCAACCCTTTG+TGG | - | chr4.3:41840465-41840484 | MS.gene062556:intron | 40.0% | |
| TAACCATCACCTTGAGGATA+AGG | - | chr4.3:41842195-41842214 | MS.gene062556:intron | 40.0% | |
| TACTAAAACCAGCACTTCCA+AGG | + | chr4.3:41839905-41839924 | None:intergenic | 40.0% | |
| TAGCCTCAATGACAACATGT+GGG | - | chr4.3:41840376-41840395 | MS.gene062556:intron | 40.0% | |
| TCTGATTCCTAGGGGAAAAA+AGG | + | chr4.3:41839722-41839741 | None:intergenic | 40.0% | |
| TGAAATAACTGAGTTGCGGA+CGG | + | chr4.3:41840301-41840320 | None:intergenic | 40.0% | |
| TGGCAGTGAGGGAATTATAA+GGG | - | chr4.3:41842355-41842374 | MS.gene062556:intron | 40.0% | |
| TGTGACAACCAACTCAGAAA+GGG | + | chr4.3:41841106-41841125 | None:intergenic | 40.0% | |
| TTCTGTTGGTACAATCTTGG+CGG | - | chr4.3:41842794-41842813 | MS.gene062556:CDS | 40.0% | |
| TTGGCAGTGAGGGAATTATA+AGG | - | chr4.3:41842354-41842373 | MS.gene062556:intron | 40.0% | |
| TTTACCTTAGAACCCTGTAC+TGG | - | chr4.3:41841741-41841760 | MS.gene062556:CDS | 40.0% | |
| TTTACTAGAGAGAGAGAGAG+GGG | + | chr4.3:41838879-41838898 | None:intergenic | 40.0% | |
| ! | ACTGGCTTATTACCTAGTCA+TGG | - | chr4.3:41841901-41841920 | MS.gene062556:intron | 40.0% |
| ! | AGTGTTTTGCTTCCTTTCAG+TGG | - | chr4.3:41841820-41841839 | MS.gene062556:intron | 40.0% |
| ! | ATTTTAAATCCACTCCGGAC+TGG | - | chr4.3:41841990-41842009 | MS.gene062556:intron | 40.0% |
| ! | CAATATTTTCCGGGAGAATG+GGG | + | chr4.3:41839989-41840008 | None:intergenic | 40.0% |
| ! | CCAATATTTTCCGGGAGAAT+GGG | + | chr4.3:41839990-41840009 | None:intergenic | 40.0% |
| ! | GCTCGATACTTTTACTGCAT+TGG | - | chr4.3:41842071-41842090 | MS.gene062556:intron | 40.0% |
| ! | GGATTTTTCTAATCCCCACT+TGG | - | chr4.3:41841486-41841505 | MS.gene062556:CDS | 40.0% |
| ! | GGTTGTTAAGAGTGTAGGAT+GGG | - | chr4.3:41842251-41842270 | MS.gene062556:intron | 40.0% |
| ! | GTATTTTCCTCACTCTGTTC+TGG | - | chr4.3:41842671-41842690 | MS.gene062556:intron | 40.0% |
| ! | GTGTGCTTTTATATCGCGAT+AGG | - | chr4.3:41840767-41840786 | MS.gene062556:intron | 40.0% |
| ! | TCCATCTTTTTGTGCCAAGT+GGG | + | chr4.3:41841503-41841522 | None:intergenic | 40.0% |
| ! | TGTAAGGGAGCATAATCCTA+TGG | - | chr4.3:41840907-41840926 | MS.gene062556:intron | 40.0% |
| ! | TTTTAAATCCACTCCGGACT+GGG | - | chr4.3:41841991-41842010 | MS.gene062556:intron | 40.0% |
| !! | AAGAATGGGCAAAAGTACCT+CGG | - | chr4.3:41840512-41840531 | MS.gene062556:intron | 40.0% |
| !! | AGATGGAGGATTTTTGAGGA+TGG | - | chr4.3:41841516-41841535 | MS.gene062556:intron | 40.0% |
| !! | GCTAGCAGGTTTTATCCTTT+AGG | - | chr4.3:41842533-41842552 | MS.gene062556:intron | 40.0% |
| !! | TAAGCTTTGAGGAAGGTGTT+AGG | - | chr4.3:41840725-41840744 | MS.gene062556:intron | 40.0% |
| !! | TACTTGGTGGTGTGAAGAAT+GGG | - | chr4.3:41840498-41840517 | MS.gene062556:intron | 40.0% |
| AAACCTTACTTTGGGCCGTT+TGG | - | chr4.3:41839136-41839155 | MS.gene062556:intron | 45.0% | |
| AAATTGGAGACTTCCCAGTC+CGG | + | chr4.3:41842007-41842026 | None:intergenic | 45.0% | |
| AACCATGAGGCTTCATGCTA+CGG | - | chr4.3:41842135-41842154 | MS.gene062556:intron | 45.0% | |
| AACTGGAAGATGAGAGGGAT+TGG | - | chr4.3:41841967-41841986 | MS.gene062556:intron | 45.0% | |
| AAGTTGAAACCCCATTCTCC+CGG | - | chr4.3:41839977-41839996 | MS.gene062556:intron | 45.0% | |
| AATCCAAACGGCCCAAAGTA+AGG | + | chr4.3:41839142-41839161 | None:intergenic | 45.0% | |
| ACACTCTTGTATCGCAGAGT+AGG | + | chr4.3:41840072-41840091 | None:intergenic | 45.0% | |
| ACAGAGATGGAGAAAGTGGA+TGG | - | chr4.3:41842453-41842472 | MS.gene062556:intron | 45.0% | |
| ACAGAGGATCCAGTCACATA+AGG | + | chr4.3:41839039-41839058 | None:intergenic | 45.0% | |
| ACAGCCATTAAACTCCCATC+GGG | + | chr4.3:41842163-41842182 | None:intergenic | 45.0% | |
| ACTACGAGCAGTAACGTTAG+TGG | + | chr4.3:41842036-41842055 | None:intergenic | 45.0% | |
| AGACTTACATAAGCTCGTCG+AGG | + | chr4.3:41840176-41840195 | None:intergenic | 45.0% | |
| AGATGGAGAAAGTGGATGGA+AGG | - | chr4.3:41842457-41842476 | MS.gene062556:intron | 45.0% | |
| AGATTCGAGGGATATTGGGT+GGG | - | chr4.3:41842489-41842508 | MS.gene062556:intron | 45.0% | |
| AGTACAAGGGAGTTCCACAA+AGG | + | chr4.3:41840482-41840501 | None:intergenic | 45.0% | |
| ATAGGAACCAGAACAGAGTG+AGG | + | chr4.3:41842681-41842700 | None:intergenic | 45.0% | |
| ATGAAGTGGGTGAACCTTTG+CGG | - | chr4.3:41839435-41839454 | MS.gene062556:intron | 45.0% | |
| ATGACAACATGTGGGATGAC+GGG | - | chr4.3:41840384-41840403 | MS.gene062556:intron | 45.0% | |
| ATTCTACCCGTGCAAAGGAA+AGG | + | chr4.3:41841653-41841672 | None:intergenic | 45.0% | |
| CACTTGGCACAAAAAGATGG+AGG | - | chr4.3:41841502-41841521 | MS.gene062556:intron | 45.0% | |
| CATCCCACATGTTGTCATTG+AGG | + | chr4.3:41840382-41840401 | None:intergenic | 45.0% | |
| CCCATTCTCCCGGAAAATAT+TGG | - | chr4.3:41839987-41840006 | MS.gene062556:intron | 45.0% | |
| CCTTTGTTCACTCCAGTACA+GGG | + | chr4.3:41841756-41841775 | None:intergenic | 45.0% | |
| CTGTGACAACCAACTCAGAA+AGG | + | chr4.3:41841107-41841126 | None:intergenic | 45.0% | |
| CTTCACACCACCAAGTACAA+GGG | + | chr4.3:41840495-41840514 | None:intergenic | 45.0% | |
| GAAAGTCTGGTAAGGAACAC+AGG | - | chr4.3:41842511-41842530 | MS.gene062556:intron | 45.0% | |
| GAAGATGACCACATAGCTAC+TGG | - | chr4.3:41840649-41840668 | MS.gene062556:intron | 45.0% | |
| GACAGCCATTAAACTCCCAT+CGG | + | chr4.3:41842164-41842183 | None:intergenic | 45.0% | |
| GATCCAGATTCGAGGGATAT+TGG | - | chr4.3:41842484-41842503 | MS.gene062556:intron | 45.0% | |
| GCAGTTTAACTAGTGAGGAC+TGG | - | chr4.3:41841411-41841430 | MS.gene062556:CDS | 45.0% | |
| GCTTTCAAGAATCCCACAGT+TGG | - | chr4.3:41843014-41843033 | MS.gene062556:intron | 45.0% | |
| GGCTAGGAAATCATCTTGCT+AGG | - | chr4.3:41840671-41840690 | MS.gene062556:intron | 45.0% | |
| GGTTCTCTGTGATTCAGCTA+CGG | + | chr4.3:41838844-41838863 | None:intergenic | 45.0% | |
| GTACAAGGGAGTTCCACAAA+GGG | + | chr4.3:41840481-41840500 | None:intergenic | 45.0% | |
| GTAGCCTCAATGACAACATG+TGG | - | chr4.3:41840375-41840394 | MS.gene062556:intron | 45.0% | |
| GTCTGCTGTCAACAAGATAC+AGG | - | chr4.3:41840789-41840808 | MS.gene062556:intron | 45.0% | |
| GTTATCTCTCTGCTGAACTC+CGG | - | chr4.3:41839685-41839704 | MS.gene062556:intron | 45.0% | |
| TCACCTTATCCTCAAGGTGA+TGG | + | chr4.3:41842201-41842220 | None:intergenic | 45.0% | |
| TCCTTTGTTCACTCCAGTAC+AGG | + | chr4.3:41841757-41841776 | None:intergenic | 45.0% | |
| TCGAGAGCAAGTTCAATGTC+TGG | + | chr4.3:41839535-41839554 | None:intergenic | 45.0% | |
| TCTTCACACCACCAAGTACA+AGG | + | chr4.3:41840496-41840515 | None:intergenic | 45.0% | |
| TGCCACTCATCACGAAGAAT+CGG | + | chr4.3:41840697-41840716 | None:intergenic | 45.0% | |
| TGCTGAACTCCGGATTACTA+GGG | - | chr4.3:41839695-41839714 | MS.gene062556:intron | 45.0% | |
| TGCTTTCCTTTCCTTTGCAC+GGG | - | chr4.3:41841644-41841663 | MS.gene062556:intron | 45.0% | |
| TTACTAGAGAGAGAGAGAGG+GGG | + | chr4.3:41838878-41838897 | None:intergenic | 45.0% | |
| TTATGTGACTGGATCCTCTG+TGG | - | chr4.3:41839038-41839057 | MS.gene062556:intron | 45.0% | |
| TTCCACAAGCATCCACTGAA+AGG | + | chr4.3:41841835-41841854 | None:intergenic | 45.0% | |
| TTCCTTTCAGTGGATGCTTG+TGG | - | chr4.3:41841830-41841849 | MS.gene062556:intron | 45.0% | |
| TTCTCCACTGGCACCAATAA+GGG | + | chr4.3:41840124-41840143 | None:intergenic | 45.0% | |
| TTGTGGAACTCCCTTGTACT+TGG | - | chr4.3:41840482-41840501 | MS.gene062556:intron | 45.0% | |
| TTTCTCCACTGGCACCAATA+AGG | + | chr4.3:41840125-41840144 | None:intergenic | 45.0% | |
| ! | AAGGGAGCATAATCCTATGG+AGG | - | chr4.3:41840910-41840929 | MS.gene062556:intron | 45.0% |
| ! | AGGTGTCATGTAGGCTTTCA+AGG | - | chr4.3:41842100-41842119 | MS.gene062556:intron | 45.0% |
| ! | ATGAAGTGCTTGAGCCTTAG+TGG | - | chr4.3:41839582-41839601 | MS.gene062556:intron | 45.0% |
| ! | CCATCTTTTTGTGCCAAGTG+GGG | + | chr4.3:41841502-41841521 | None:intergenic | 45.0% |
| ! | CCCAATATTTTCCGGGAGAA+TGG | + | chr4.3:41839991-41840010 | None:intergenic | 45.0% |
| ! | CGGTTGTTAAGAGTGTAGGA+TGG | - | chr4.3:41842250-41842269 | MS.gene062556:intron | 45.0% |
| ! | CTCACGGTTGTTAAGAGTGT+AGG | - | chr4.3:41842246-41842265 | MS.gene062556:intron | 45.0% |
| ! | CTCCATCTTTTTGTGCCAAG+TGG | + | chr4.3:41841504-41841523 | None:intergenic | 45.0% |
| ! | GACTGGGAAGTCTCCAATTT+TGG | - | chr4.3:41842007-41842026 | MS.gene062556:intron | 45.0% |
| ! | TGGACCATTAGGTGTCATGT+AGG | - | chr4.3:41842091-41842110 | MS.gene062556:intron | 45.0% |
| ! | TTGTGATTCCTTGGAAGTGC+TGG | - | chr4.3:41839894-41839913 | MS.gene062556:intron | 45.0% |
| !! | ATAAGGGTGTGTAACGGACT+TGG | - | chr4.3:41842371-41842390 | MS.gene062556:intron | 45.0% |
| !! | GAATTCTCTAGGACCTAAGG+AGG | - | chr4.3:41840406-41840425 | MS.gene062556:intron | 45.0% |
| !! | GGGGAGTATTGTTAGACTCA+CGG | - | chr4.3:41842230-41842249 | MS.gene062556:intron | 45.0% |
| !! | GTACTTGGTGGTGTGAAGAA+TGG | - | chr4.3:41840497-41840516 | MS.gene062556:intron | 45.0% |
| !! | TGAGGAAGGTGTTAGGTTAC+TGG | - | chr4.3:41840732-41840751 | MS.gene062556:intron | 45.0% |
| !! | TGCGATACAAGAGTGTTGAG+CGG | - | chr4.3:41840076-41840095 | MS.gene062556:intron | 45.0% |
| !! | TGTAACGGACTTGGATAGGA+AGG | - | chr4.3:41842380-41842399 | MS.gene062556:intron | 45.0% |
| AAATGTGCAAAGGGCCCGTT+TGG | + | chr4.3:41839337-41839356 | None:intergenic | 50.0% | |
| AAGGAGAGGATCCAGATTCG+AGG | - | chr4.3:41842476-41842495 | MS.gene062556:intron | 50.0% | |
| AGAATGGGACACATGGCCTT+AGG | - | chr4.3:41842313-41842332 | MS.gene062556:intron | 50.0% | |
| AGGAGAGGATCCAGATTCGA+GGG | - | chr4.3:41842477-41842496 | MS.gene062556:intron | 50.0% | |
| CACCCAATATCCCTCGAATC+TGG | + | chr4.3:41842490-41842509 | None:intergenic | 50.0% | |
| CACTCCAGTACAGGGTTCTA+AGG | + | chr4.3:41841748-41841767 | None:intergenic | 50.0% | |
| CAGATTCGAGGGATATTGGG+TGG | - | chr4.3:41842488-41842507 | MS.gene062556:intron | 50.0% | |
| CAGCCATTAAACTCCCATCG+GGG | + | chr4.3:41842162-41842181 | None:intergenic | 50.0% | |
| CATCTTACTCACCCCAACTC+GGG | - | chr4.3:41840836-41840855 | MS.gene062556:intron | 50.0% | |
| CCATCTTACTCACCCCAACT+CGG | - | chr4.3:41840835-41840854 | MS.gene062556:intron | 50.0% | |
| CCCCACTTGGCACAAAAAGA+TGG | - | chr4.3:41841499-41841518 | MS.gene062556:intron | 50.0% | |
| CCCTGTACTGGAGTGAACAA+AGG | - | chr4.3:41841753-41841772 | MS.gene062556:CDS | 50.0% | |
| CTCATGGCTTCTGATATGGG+AGG | - | chr4.3:41839087-41839106 | MS.gene062556:intron | 50.0% | |
| CTGCTGAACTCCGGATTACT+AGG | - | chr4.3:41839694-41839713 | MS.gene062556:intron | 50.0% | |
| GAACCTTCAGCACCAACTGT+GGG | + | chr4.3:41843029-41843048 | None:intergenic | 50.0% | |
| GAGAAAGTGGATGGAAGGAG+AGG | - | chr4.3:41842462-41842481 | MS.gene062556:intron | 50.0% | |
| GCACATCTCCCTTTCTGAGT+TGG | - | chr4.3:41841095-41841114 | MS.gene062556:CDS | 50.0% | |
| GGATATTGGGTGGGAAAGTC+TGG | - | chr4.3:41842498-41842517 | MS.gene062556:intron | 50.0% | |
| GTCGCTTAACCATCACCTTG+AGG | - | chr4.3:41842189-41842208 | MS.gene062556:intron | 50.0% | |
| TAAGCTCGTCGAGGTAACGT+TGG | + | chr4.3:41840167-41840186 | None:intergenic | 50.0% | |
| TACTAGAGAGAGAGAGAGGG+GGG | + | chr4.3:41838877-41838896 | None:intergenic | 50.0% | |
| TGGAACTCCCTTGTACTTGG+TGG | - | chr4.3:41840485-41840504 | MS.gene062556:intron | 50.0% | |
| TTCCTAGCCCAGTAGCTATG+TGG | + | chr4.3:41840660-41840679 | None:intergenic | 50.0% | |
| TTGAGCGGGTGAAGCCTATT+GGG | - | chr4.3:41840091-41840110 | MS.gene062556:intron | 50.0% | |
| TTGGGTGGGAAAGTCTGGTA+AGG | - | chr4.3:41842503-41842522 | MS.gene062556:intron | 50.0% | |
| ! | AGGTGATGGTTAAGCGACAC+TGG | + | chr4.3:41842187-41842206 | None:intergenic | 50.0% |
| ! | GGTGATGGTTAAGCGACACT+GGG | + | chr4.3:41842186-41842205 | None:intergenic | 50.0% |
| !! | AATCCCACAGTTGGTGCTGA+AGG | - | chr4.3:41843023-41843042 | MS.gene062556:intron | 50.0% |
| !! | CATTCCCTTATTGGTGCCAG+TGG | - | chr4.3:41840117-41840136 | MS.gene062556:intron | 50.0% |
| !! | CGGGAATTCTCTAGGACCTA+AGG | - | chr4.3:41840403-41840422 | MS.gene062556:intron | 50.0% |
| !! | GCGATACAAGAGTGTTGAGC+GGG | - | chr4.3:41840077-41840096 | MS.gene062556:intron | 50.0% |
| !! | GGTGTGTAACGGACTTGGAT+AGG | - | chr4.3:41842376-41842395 | MS.gene062556:intron | 50.0% |
| !! | TGGGATGACGGGAATTCTCT+AGG | - | chr4.3:41840395-41840414 | MS.gene062556:intron | 50.0% |
| !!! | CTAGGGACCTTTTTTCCCCT+AGG | - | chr4.3:41839712-41839731 | MS.gene062556:intron | 50.0% |
| ACTAGAGAGAGAGAGAGGGG+GGG | + | chr4.3:41838876-41838895 | None:intergenic | 55.0% | |
| CAATTGAGGGACCCGAGTTG+GGG | + | chr4.3:41840850-41840869 | None:intergenic | 55.0% | |
| CGAACCTTCAGCACCAACTG+TGG | + | chr4.3:41843030-41843049 | None:intergenic | 55.0% | |
| CTGGTAAGCAGTAGCCCACA+TGG | - | chr4.3:41841430-41841449 | MS.gene062556:CDS | 55.0% | |
| GACCACATAGCTACTGGGCT+AGG | - | chr4.3:41840655-41840674 | MS.gene062556:intron | 55.0% | |
| GCAATTGAGGGACCCGAGTT+GGG | + | chr4.3:41840851-41840870 | None:intergenic | 55.0% | |
| GGACCCCGATGGGAGTTTAA+TGG | - | chr4.3:41842156-41842175 | MS.gene062556:intron | 55.0% | |
| GGTAAGGAACACAGGCTAGC+AGG | - | chr4.3:41842519-41842538 | MS.gene062556:intron | 55.0% | |
| GTATCGCAGAGTAGGCCCAT+AGG | + | chr4.3:41840064-41840083 | None:intergenic | 55.0% | |
| GTCCGTAGCATGAAGCCTCA+TGG | + | chr4.3:41842140-41842159 | None:intergenic | 55.0% | |
| GTTGAGCGGGTGAAGCCTAT+TGG | - | chr4.3:41840090-41840109 | MS.gene062556:intron | 55.0% | |
| TGCAAAGGGCCCGTTTGGAT+TGG | + | chr4.3:41839332-41839351 | None:intergenic | 55.0% | |
| TGCAATTGAGGGACCCGAGT+TGG | + | chr4.3:41840852-41840871 | None:intergenic | 55.0% | |
| TTCATGCTACGGACCCCGAT+GGG | - | chr4.3:41842146-41842165 | MS.gene062556:intron | 55.0% | |
| ! | CCGAGTTGGGGTGAGTAAGA+TGG | + | chr4.3:41840838-41840857 | None:intergenic | 55.0% |
| ! | GACACATGGCCTTAGGAGAG+TGG | - | chr4.3:41842320-41842339 | MS.gene062556:intron | 55.0% |
| ! | GGCCGATTCTTCGTGATGAG+TGG | - | chr4.3:41840692-41840711 | MS.gene062556:intron | 55.0% |
| !! | CAAAAGTACCTCGGCACGGT+AGG | - | chr4.3:41840521-41840540 | MS.gene062556:intron | 55.0% |
| !! | CAGTTGGTGCTGAAGGTTCG+TGG | - | chr4.3:41843030-41843049 | MS.gene062556:CDS | 55.0% |
| !! | TGGGCAAAAGTACCTCGGCA+CGG | - | chr4.3:41840517-41840536 | MS.gene062556:intron | 55.0% |
| CTAGAGAGAGAGAGAGGGGG+GGG | + | chr4.3:41838875-41838894 | None:intergenic | 60.0% | |
| CTTCATGCTACGGACCCCGA+TGG | - | chr4.3:41842145-41842164 | MS.gene062556:intron | 60.0% | |
| AGAGAGGGGGGGGACGTACA+AGG | + | chr4.3:41838865-41838884 | None:intergenic | 65.0% | |
| GGAGACTTCCCAGTCCGGAG+TGG | + | chr4.3:41842002-41842021 | None:intergenic | 65.0% | |
| TACCTCGGCACGGTAGGCCT+TGG | - | chr4.3:41840527-41840546 | MS.gene062556:intron | 65.0% | |
| AGCCAAGGCCTACCGTGCCG+AGG | + | chr4.3:41840532-41840551 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 41838834 | 41843055 | 41838834 | ID=MS.gene062556 |
| chr4.3 | mRNA | 41838834 | 41843055 | 41838834 | ID=MS.gene062556.t1;Parent=MS.gene062556 |
| chr4.3 | exon | 41843024 | 41843055 | 41843024 | ID=MS.gene062556.t1.exon1;Parent=MS.gene062556.t1 |
| chr4.3 | CDS | 41843024 | 41843055 | 41843024 | ID=cds.MS.gene062556.t1;Parent=MS.gene062556.t1 |
| chr4.3 | exon | 41842781 | 41842857 | 41842781 | ID=MS.gene062556.t1.exon2;Parent=MS.gene062556.t1 |
| chr4.3 | CDS | 41842781 | 41842857 | 41842781 | ID=cds.MS.gene062556.t1;Parent=MS.gene062556.t1 |
| chr4.3 | exon | 41841702 | 41841831 | 41841702 | ID=MS.gene062556.t1.exon3;Parent=MS.gene062556.t1 |
| chr4.3 | CDS | 41841702 | 41841831 | 41841702 | ID=cds.MS.gene062556.t1;Parent=MS.gene062556.t1 |
| chr4.3 | exon | 41841351 | 41841510 | 41841351 | ID=MS.gene062556.t1.exon4;Parent=MS.gene062556.t1 |
| chr4.3 | CDS | 41841351 | 41841510 | 41841351 | ID=cds.MS.gene062556.t1;Parent=MS.gene062556.t1 |
| chr4.3 | exon | 41841079 | 41841264 | 41841079 | ID=MS.gene062556.t1.exon5;Parent=MS.gene062556.t1 |
| chr4.3 | CDS | 41841079 | 41841264 | 41841079 | ID=cds.MS.gene062556.t1;Parent=MS.gene062556.t1 |
| chr4.3 | exon | 41838834 | 41838947 | 41838834 | ID=MS.gene062556.t1.exon6;Parent=MS.gene062556.t1 |
| chr4.3 | CDS | 41838834 | 41838947 | 41838834 | ID=cds.MS.gene062556.t1;Parent=MS.gene062556.t1 |
| Gene Sequence |
| Protein sequence |
