Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062672.t1 | XP_024642082.1 | 89.7 | 513 | 19 | 1 | 1 | 513 | 1 | 479 | 4.30E-253 | 883.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062672.t1 | Q17QR8 | 25.7 | 230 | 151 | 6 | 234 | 458 | 96 | 310 | 1.4e-10 | 69.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062672.t1 | A0A396HHR3 | 89.7 | 513 | 19 | 1 | 1 | 513 | 1 | 479 | 3.1e-253 | 883.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene062672 | 0.800344 | 1.51E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene062672 | 0.819422 | 1.17E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene062672 | 0.823205 | 1.57E-53 | -1.69E-46 |
| MS.gene049825 | MS.gene062672 | 0.829012 | 6.53E-55 | -1.69E-46 |
| MS.gene049850 | MS.gene062672 | 0.818685 | 1.72E-52 | -1.69E-46 |
| MS.gene049873 | MS.gene062672 | 0.834772 | 2.47E-56 | -1.69E-46 |
| MS.gene050201 | MS.gene062672 | 0.802663 | 5.04E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene062672 | 0.838749 | 2.39E-57 | -1.69E-46 |
| MS.gene050355 | MS.gene062672 | 0.829992 | 3.77E-55 | -1.69E-46 |
| MS.gene051574 | MS.gene062672 | 0.805587 | 1.24E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene062672 | 0.821131 | 4.75E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene062672 | 0.815796 | 7.69E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene062672 | 0.805947 | 1.04E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene062672 | 0.808847 | 2.53E-50 | -1.69E-46 |
| MS.gene052012 | MS.gene062672 | 0.801306 | 9.58E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene062672 | 0.816426 | 5.56E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene062672 | 0.828481 | 8.78E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene062672 | 0.832946 | 7.07E-56 | -1.69E-46 |
| MS.gene052586 | MS.gene062672 | 0.801026 | 1.09E-48 | -1.69E-46 |
| MS.gene052773 | MS.gene062672 | 0.805639 | 1.21E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene062672 | 0.81639 | 5.67E-52 | -1.69E-46 |
| MS.gene053054 | MS.gene062672 | -0.80208 | 6.65E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene062672 | 0.802721 | 4.91E-49 | -1.69E-46 |
| MS.gene053221 | MS.gene062672 | 0.800814 | 1.21E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene062672 | 0.8513 | 9.71E-61 | -1.69E-46 |
| MS.gene053599 | MS.gene062672 | 0.801985 | 6.95E-49 | -1.69E-46 |
| MS.gene05365 | MS.gene062672 | 0.802929 | 4.44E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene062672 | -0.805173 | 1.52E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene062672 | 0.822927 | 1.82E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene062672 | 0.804335 | 2.27E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene062672 | 0.803081 | 4.13E-49 | -1.69E-46 |
| MS.gene054967 | MS.gene062672 | 0.803721 | 3.04E-49 | -1.69E-46 |
| MS.gene055166 | MS.gene062672 | 0.821311 | 4.32E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene062672 | 0.824891 | 6.31E-54 | -1.69E-46 |
| MS.gene055586 | MS.gene062672 | 0.80703 | 6.17E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene062672 | 0.824404 | 8.22E-54 | -1.69E-46 |
| MS.gene055808 | MS.gene062672 | 0.831378 | 1.73E-55 | -1.69E-46 |
| MS.gene055818 | MS.gene062672 | 0.811204 | 7.87E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene062672 | 0.813169 | 2.93E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene062672 | 0.807977 | 3.88E-50 | -1.69E-46 |
| MS.gene056091 | MS.gene062672 | 0.814762 | 1.31E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene062672 | 0.805908 | 1.06E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene062672 | 0.820468 | 6.75E-53 | -1.69E-46 |
| MS.gene056642 | MS.gene062672 | 0.806685 | 7.30E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene062672 | 0.832061 | 1.17E-55 | -1.69E-46 |
| MS.gene057027 | MS.gene062672 | 0.801213 | 1.00E-48 | -1.69E-46 |
| MS.gene057060 | MS.gene062672 | 0.831601 | 1.52E-55 | -1.69E-46 |
| MS.gene057314 | MS.gene062672 | 0.815381 | 9.52E-52 | -1.69E-46 |
| MS.gene057414 | MS.gene062672 | 0.801537 | 8.59E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene062672 | 0.803051 | 4.19E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene062672 | 0.804886 | 1.74E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene062672 | 0.80479 | 1.82E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene062672 | 0.829133 | 6.10E-55 | -1.69E-46 |
| MS.gene058829 | MS.gene062672 | 0.828264 | 9.90E-55 | -1.69E-46 |
| MS.gene058908 | MS.gene062672 | 0.812265 | 4.63E-51 | -1.69E-46 |
| MS.gene058911 | MS.gene062672 | 0.809467 | 1.86E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene062672 | 0.839287 | 1.73E-57 | -1.69E-46 |
| MS.gene059625 | MS.gene062672 | 0.815295 | 9.95E-52 | -1.69E-46 |
| MS.gene059789 | MS.gene062672 | 0.801764 | 7.72E-49 | -1.69E-46 |
| MS.gene059935 | MS.gene062672 | 0.810469 | 1.14E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene062672 | 0.836924 | 7.04E-57 | -1.69E-46 |
| MS.gene060521 | MS.gene062672 | 0.800317 | 1.53E-48 | -1.69E-46 |
| MS.gene060553 | MS.gene062672 | 0.808002 | 3.84E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene062672 | 0.82895 | 6.76E-55 | -1.69E-46 |
| MS.gene060586 | MS.gene062672 | 0.803531 | 3.33E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene062672 | -0.805779 | 1.13E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062672.t1 | MTR_1g077100 | 71.818 | 110 | 26 | 2 | 1 | 107 | 1 | 108 | 1.58e-45 | 156 |
| MS.gene062672.t1 | MTR_4g055725 | 36.032 | 247 | 138 | 4 | 135 | 380 | 38 | 265 | 6.67e-44 | 156 |
| MS.gene062672.t1 | MTR_4g117120 | 35.928 | 167 | 103 | 3 | 143 | 309 | 122 | 284 | 1.12e-24 | 105 |
| MS.gene062672.t1 | MTR_5g022570 | 55.294 | 85 | 35 | 2 | 25 | 107 | 193 | 276 | 1.88e-20 | 92.4 |
| MS.gene062672.t1 | MTR_7g056633 | 41.584 | 101 | 59 | 0 | 175 | 275 | 32 | 132 | 2.60e-19 | 84.7 |
| MS.gene062672.t1 | MTR_7g094990 | 30.387 | 181 | 114 | 4 | 135 | 309 | 33 | 207 | 5.00e-18 | 86.7 |
| MS.gene062672.t1 | MTR_8g463880 | 40.000 | 115 | 64 | 2 | 147 | 258 | 35 | 147 | 2.21e-17 | 79.7 |
| MS.gene062672.t1 | MTR_4g117940 | 37.168 | 113 | 68 | 1 | 167 | 279 | 67 | 176 | 2.53e-16 | 77.4 |
| MS.gene062672.t1 | MTR_5g063300 | 37.113 | 97 | 60 | 1 | 176 | 271 | 51 | 147 | 2.06e-12 | 65.5 |
| MS.gene062672.t1 | MTR_1g024830 | 47.692 | 65 | 33 | 1 | 43 | 107 | 264 | 327 | 3.31e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062672.t1 | AT5G41980 | 48.658 | 298 | 137 | 3 | 163 | 460 | 30 | 311 | 2.86e-93 | 289 |
| MS.gene062672.t1 | AT1G43722 | 33.557 | 298 | 182 | 7 | 135 | 421 | 27 | 319 | 6.03e-42 | 153 |
| MS.gene062672.t1 | AT5G28730 | 31.687 | 243 | 135 | 4 | 164 | 401 | 13 | 229 | 3.87e-32 | 125 |
| MS.gene062672.t1 | AT5G35695 | 45.926 | 135 | 61 | 1 | 323 | 457 | 25 | 147 | 7.89e-31 | 119 |
| MS.gene062672.t1 | AT5G28950 | 46.875 | 96 | 51 | 0 | 257 | 352 | 1 | 96 | 3.99e-24 | 98.6 |
| MS.gene062672.t1 | AT3G30525 | 33.750 | 160 | 99 | 3 | 285 | 439 | 1 | 158 | 1.18e-19 | 86.7 |
Find 109 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACGACTTCTTGAATAAA+TGG | 0.143416 | 6.4:-45806900 | MS.gene062672:CDS |
| CTAGCACTGTTGAGAATTTC+TGG | 0.157165 | 6.4:+45808001 | None:intergenic |
| AACAACTCCTTTGCATTTCT+TGG | 0.218146 | 6.4:+45807231 | None:intergenic |
| CTTCTGTATTTAAGTATTCT+TGG | 0.218368 | 6.4:+45807319 | None:intergenic |
| ACCCAGGAGATGTGGATTTA+TGG | 0.249166 | 6.4:-45808326 | MS.gene062672:CDS |
| GACTGGTTATTCAGTAGTTT+AGG | 0.261552 | 6.4:-45807039 | MS.gene062672:CDS |
| CACCGACTCACGGGTGTTAA+AGG | 0.267503 | 6.4:-45807679 | MS.gene062672:CDS |
| ATGAAAACCTCCCGGGCATT+AGG | 0.298800 | 6.4:+45808801 | None:intergenic |
| ATCATTCAGACCTTGAAATA+TGG | 0.304552 | 6.4:+45807971 | None:intergenic |
| TGAACGTAATAGAGTGATTC+AGG | 0.333897 | 6.4:-45808134 | MS.gene062672:CDS |
| GATGATGAGGATGGTTCTTC+AGG | 0.349700 | 6.4:-45809092 | MS.gene062672:CDS |
| CTATTATTTCAGGATTGTAT+AGG | 0.362544 | 6.4:-45807855 | MS.gene062672:intron |
| ACTGGTTATTCAGTAGTTTA+GGG | 0.364419 | 6.4:-45807038 | MS.gene062672:CDS |
| GCAAATTCCTGCACATGTTC+CGG | 0.367277 | 6.4:-45807817 | MS.gene062672:CDS |
| AATGAGAATGCATTCTGTTC+TGG | 0.375209 | 6.4:+45806949 | None:intergenic |
| AAGAGGGGCCGAAAAGCTTC+TGG | 0.377408 | 6.4:-45808999 | MS.gene062672:CDS |
| CAAAGGAGTTGTTCAATCAT+AGG | 0.383328 | 6.4:-45807221 | MS.gene062672:CDS |
| GAACTCGTTGCGGCTGCTGC+TGG | 0.386586 | 6.4:-45808397 | MS.gene062672:CDS |
| TGCCATAAATCCACATCTCC+TGG | 0.393862 | 6.4:+45808324 | None:intergenic |
| GCGAAATCGAGATTGATCTT+TGG | 0.398795 | 6.4:+45807794 | None:intergenic |
| ACCAGTCATTTCTTTCTTCA+CGG | 0.401217 | 6.4:+45807055 | None:intergenic |
| ATTTGTGGGAAATTCTGATC+TGG | 0.404418 | 6.4:+45807642 | None:intergenic |
| CTGCATCATGGCATCCACTA+TGG | 0.407457 | 6.4:+45808971 | None:intergenic |
| TACCAGCCTTATGAGTTTAG+AGG | 0.410566 | 6.4:-45807267 | MS.gene062672:CDS |
| TGAAAACCTCCCGGGCATTA+GGG | 0.410829 | 6.4:+45808802 | None:intergenic |
| TATCACGTAACATGGCTCTT+TGG | 0.418711 | 6.4:+45808215 | None:intergenic |
| TGACGACTTCTTGAATAAAT+GGG | 0.432370 | 6.4:-45806899 | MS.gene062672:CDS |
| TGAGGAGCAAGTTTCATGAT+TGG | 0.432849 | 6.4:+45807141 | None:intergenic |
| TTCTGAGAAATACTATCTTA+AGG | 0.437134 | 6.4:-45807191 | MS.gene062672:CDS |
| TCAGGAGCGGTTTCAGCACT+CGG | 0.439358 | 6.4:-45808116 | MS.gene062672:CDS |
| AACGAACCTTGAGGAATTTG+TGG | 0.440004 | 6.4:+45807627 | None:intergenic |
| TCAATACATTATTAAAATGT+CGG | 0.443527 | 6.4:+45808080 | None:intergenic |
| CAACTAGTGGTGGTCGGAAG+AGG | 0.445669 | 6.4:-45809016 | MS.gene062672:CDS |
| GAAGAAATAAATTGAACATC+GGG | 0.447295 | 6.4:+45806976 | None:intergenic |
| GCCATGTTACGTGATACTTC+TGG | 0.460394 | 6.4:-45808208 | MS.gene062672:CDS |
| TCACTCTATTACGTTCACTA+TGG | 0.463287 | 6.4:+45808140 | None:intergenic |
| TCTGGTGATGTTGTATCCTC+AGG | 0.466979 | 6.4:+45808019 | None:intergenic |
| GAGGAGCAAGTTTCATGATT+GGG | 0.469428 | 6.4:+45807142 | None:intergenic |
| TGAACATCGGGAAGTTCGTC+AGG | 0.474711 | 6.4:+45806988 | None:intergenic |
| GGGTGATATTGACATGGAAT+TGG | 0.487275 | 6.4:-45808428 | MS.gene062672:CDS |
| TCTTTGGCCGGAACATGTGC+AGG | 0.489674 | 6.4:+45807810 | None:intergenic |
| TTAGCACCTCTAAACTCATA+AGG | 0.498075 | 6.4:+45807261 | None:intergenic |
| GAGGATGGTTCTTCAGGCTC+AGG | 0.500473 | 6.4:-45809086 | MS.gene062672:CDS |
| ACGAACCTTGAGGAATTTGT+GGG | 0.504423 | 6.4:+45807628 | None:intergenic |
| TTGAGAATCACCCTAATGCC+CGG | 0.506051 | 6.4:-45808812 | MS.gene062672:CDS |
| TGACATGGAATTGGATGAGA+TGG | 0.507251 | 6.4:-45808419 | MS.gene062672:CDS |
| CTCTTCCGACCACCACTAGT+TGG | 0.513367 | 6.4:+45809017 | None:intergenic |
| GATGCAAGGTCTTGATGAAA+GGG | 0.513593 | 6.4:-45808859 | MS.gene062672:CDS |
| TTTGTGGGAAATTCTGATCT+GGG | 0.513968 | 6.4:+45807643 | None:intergenic |
| AACTAGTGGTGGTCGGAAGA+GGG | 0.516898 | 6.4:-45809015 | MS.gene062672:CDS |
| TGGTACCGAACCCCTTGAAA+AGG | 0.517064 | 6.4:+45807285 | None:intergenic |
| TCTCGATTTCGCAATAAGAA+AGG | 0.526197 | 6.4:-45807783 | MS.gene062672:CDS |
| CACGTAACATGGCTCTTTGG+CGG | 0.527673 | 6.4:+45808218 | None:intergenic |
| ACTCCTTTGCATTTCTTGGT+AGG | 0.529807 | 6.4:+45807235 | None:intergenic |
| TCAATATCACCCGTGCTGAT+TGG | 0.534701 | 6.4:+45808439 | None:intergenic |
| AGATGCAAGGTCTTGATGAA+AGG | 0.540422 | 6.4:-45808860 | MS.gene062672:CDS |
| AATTCTGATCTGGGTCATCA+AGG | 0.542424 | 6.4:+45807652 | None:intergenic |
| AAGGTTCTGTCACCGACTCA+CGG | 0.543196 | 6.4:-45807689 | MS.gene062672:CDS |
| AATCGAGATTGATCTTTGGC+CGG | 0.545496 | 6.4:+45807798 | None:intergenic |
| GATTGTATAGGAGTAATTGA+TGG | 0.547687 | 6.4:-45807843 | MS.gene062672:CDS |
| CACCTCTAAACTCATAAGGC+TGG | 0.552905 | 6.4:+45807265 | None:intergenic |
| AGGTTCTGTCACCGACTCAC+GGG | 0.562802 | 6.4:-45807688 | MS.gene062672:CDS |
| GGTTTATCACCCAGGAGATG+TGG | 0.563874 | 6.4:-45808334 | MS.gene062672:CDS |
| TACAGATACACCAATCAGCA+CGG | 0.565663 | 6.4:-45808449 | MS.gene062672:CDS |
| GCCATAAATCCACATCTCCT+GGG | 0.566505 | 6.4:+45808325 | None:intergenic |
| AGCAGCTGCTATCTGCATCA+TGG | 0.570810 | 6.4:+45808959 | None:intergenic |
| AGCTTCTGGTGATGCCATAG+TGG | 0.573165 | 6.4:-45808985 | MS.gene062672:CDS |
| CAAGAATACTTAAATACAGA+AGG | 0.573953 | 6.4:-45807318 | MS.gene062672:CDS |
| AATAGAGATGAAAACCTCCC+GGG | 0.577351 | 6.4:+45808794 | None:intergenic |
| TGAAGAAATAAATTGAACAT+CGG | 0.577543 | 6.4:+45806975 | None:intergenic |
| AAGCAAGTGCATCAATGTGT+TGG | 0.578048 | 6.4:-45808886 | MS.gene062672:CDS |
| CAGGAGCGGTTTCAGCACTC+GGG | 0.579751 | 6.4:-45808115 | MS.gene062672:CDS |
| GTGACAGAACCTTCCCAACC+AGG | 0.582402 | 6.4:+45807699 | None:intergenic |
| AAATGCAATTATGAAGAATG+AGG | 0.583203 | 6.4:-45808922 | MS.gene062672:CDS |
| CTTCCCGTGGTTTATCACCC+AGG | 0.584887 | 6.4:-45808342 | MS.gene062672:CDS |
| ATGGCTTTCGATGATGAGGA+TGG | 0.589950 | 6.4:-45809101 | MS.gene062672:CDS |
| TGAGAATCACCCTAATGCCC+GGG | 0.591855 | 6.4:-45808811 | MS.gene062672:CDS |
| CAAGCTAGTGTTCCAACTAG+TGG | 0.591935 | 6.4:-45809029 | MS.gene062672:CDS |
| CTGGTTATTCAGTAGTTTAG+GGG | 0.592004 | 6.4:-45807037 | MS.gene062672:CDS |
| ACTAGTGGTGGTCGGAAGAG+GGG | 0.596101 | 6.4:-45809014 | MS.gene062672:CDS |
| TTTATGGCAGAAGTGCTGAA+TGG | 0.597101 | 6.4:-45808310 | MS.gene062672:CDS |
| TGGTTATTCAGTAGTTTAGG+GGG | 0.599818 | 6.4:-45807036 | MS.gene062672:CDS |
| TAGCCTACCAAGAAATGCAA+AGG | 0.600800 | 6.4:-45807238 | MS.gene062672:CDS |
| ACAGATACACCAATCAGCAC+GGG | 0.600867 | 6.4:-45808448 | MS.gene062672:CDS |
| AATTTCCCACAAATTCCTCA+AGG | 0.601774 | 6.4:-45807633 | MS.gene062672:intron |
| TGCCTTTAACACCCGTGAGT+CGG | 0.605648 | 6.4:+45807677 | None:intergenic |
| TTAAGTATTCTTGGTCAACA+AGG | 0.607070 | 6.4:+45807328 | None:intergenic |
| TTGTCGTGAAATGTTGCGGA+TGG | 0.607611 | 6.4:-45808275 | MS.gene062672:CDS |
| TCTTGAATAAATGGGACAAG+TGG | 0.613973 | 6.4:-45806891 | MS.gene062672:CDS |
| ATCTCCTGGGTGATAAACCA+CGG | 0.624115 | 6.4:+45808338 | None:intergenic |
| ACCAGAAGTATCACGTAACA+TGG | 0.625814 | 6.4:+45808207 | None:intergenic |
| GTGTTCCAACTAGTGGTGGT+CGG | 0.629192 | 6.4:-45809022 | MS.gene062672:CDS |
| GATGATGCGAACATGTTAGA+CGG | 0.630185 | 6.4:-45809062 | MS.gene062672:CDS |
| GGTGATGTTGTATCCTCAGG+AGG | 0.631551 | 6.4:+45808022 | None:intergenic |
| CTAACAAAACAGCCTTCCCG+TGG | 0.634429 | 6.4:-45808355 | MS.gene062672:CDS |
| CAGCACGGGTGATATTGACA+TGG | 0.641811 | 6.4:-45808434 | MS.gene062672:CDS |
| GCTAGTGTTCCAACTAGTGG+TGG | 0.643381 | 6.4:-45809026 | MS.gene062672:CDS |
| GTTAATGGCTTTCGATGATG+AGG | 0.645112 | 6.4:-45809105 | None:intergenic |
| TCTCCTGGGTGATAAACCAC+GGG | 0.646361 | 6.4:+45808339 | None:intergenic |
| CTGGGTGATAAACCACGGGA+AGG | 0.661556 | 6.4:+45808343 | None:intergenic |
| GGTTATTCAGTAGTTTAGGG+GGG | 0.667813 | 6.4:-45807035 | MS.gene062672:CDS |
| GGATGAGATGGAACTCGTTG+CGG | 0.671380 | 6.4:-45808407 | MS.gene062672:CDS |
| GTAATAGAGTGATTCAGGAG+CGG | 0.681046 | 6.4:-45808129 | MS.gene062672:CDS |
| CATGTATTTCAGAAGCTGTG+TGG | 0.686088 | 6.4:-45808247 | MS.gene062672:CDS |
| GCCGTGAAGAAAGAAATGAC+TGG | 0.693527 | 6.4:-45807056 | MS.gene062672:CDS |
| TGAGTCTGAAAAGAATACTG+AGG | 0.711551 | 6.4:+45807123 | None:intergenic |
| GAATCACCCTAATGCCCGGG+AGG | 0.714237 | 6.4:-45808808 | MS.gene062672:intron |
| AGTCATTTCTTTCTTCACGG+CGG | 0.739854 | 6.4:+45807058 | None:intergenic |
| AATGTGTTGGATGAGATGCA+AGG | 0.778166 | 6.4:-45808873 | MS.gene062672:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAATTGATTAACA+TGG | + | chr6.4:45807404-45807423 | None:intergenic | 10.0% |
| !! | AAATATAAATTGATTAACAT+GGG | + | chr6.4:45807403-45807422 | None:intergenic | 10.0% |
| !! | TCAATACATTATTAAAATGT+CGG | + | chr6.4:45807912-45807931 | None:intergenic | 15.0% |
| !! | AACTATTAATTTATTTCCTC+TGG | - | chr6.4:45808615-45808634 | MS.gene062672:intron | 20.0% |
| !! | CTTAAAAGATCATACTAATA+TGG | + | chr6.4:45808060-45808079 | None:intergenic | 20.0% |
| !! | GAAAAATGAATATAAACTGA+AGG | + | chr6.4:45808271-45808290 | None:intergenic | 20.0% |
| !! | TGAAGAAATAAATTGAACAT+CGG | + | chr6.4:45809017-45809036 | None:intergenic | 20.0% |
| !!! | ATTTTCTCAAACAATTCAAA+TGG | + | chr6.4:45807270-45807289 | None:intergenic | 20.0% |
| !!! | TAGATTTTATCCATATTTCA+AGG | - | chr6.4:45808008-45808027 | MS.gene062672:CDS | 20.0% |
| ! | AAATGCAATTATGAAGAATG+AGG | - | chr6.4:45807067-45807086 | MS.gene062672:CDS | 25.0% |
| ! | ACAATCCTGAAATAATAGTA+GGG | + | chr6.4:45808132-45808151 | None:intergenic | 25.0% |
| ! | CAAGAATACTTAAATACAGA+AGG | - | chr6.4:45808671-45808690 | MS.gene062672:intron | 25.0% |
| ! | CTATTATTTCAGGATTGTAT+AGG | - | chr6.4:45808134-45808153 | MS.gene062672:CDS | 25.0% |
| ! | CTTCTGTATTTAAGTATTCT+TGG | + | chr6.4:45808673-45808692 | None:intergenic | 25.0% |
| ! | GAAGAAATAAATTGAACATC+GGG | + | chr6.4:45809016-45809035 | None:intergenic | 25.0% |
| ! | GTACTACAAGATAAATAACA+AGG | + | chr6.4:45808423-45808442 | None:intergenic | 25.0% |
| ! | TACAATCCTGAAATAATAGT+AGG | + | chr6.4:45808133-45808152 | None:intergenic | 25.0% |
| ! | TTCGTAACCAAAAACAAAAA+AGG | + | chr6.4:45807296-45807315 | None:intergenic | 25.0% |
| !! | TTCTGAGAAATACTATCTTA+AGG | - | chr6.4:45808798-45808817 | MS.gene062672:intron | 25.0% |
| !!! | AAATCGTCCTTTTTTGTTTT+TGG | - | chr6.4:45807286-45807305 | MS.gene062672:CDS | 25.0% |
| !!! | AGATTTGTTTTATGCATGAT+TGG | - | chr6.4:45807460-45807479 | MS.gene062672:intron | 25.0% |
| !!! | CAGTTTATATTCATTTTTCC+TGG | - | chr6.4:45808272-45808291 | MS.gene062672:CDS | 25.0% |
| !!! | TATATTCATTTTTCCTGGTT+GGG | - | chr6.4:45808277-45808296 | MS.gene062672:CDS | 25.0% |
| !!! | TTATATTCATTTTTCCTGGT+TGG | - | chr6.4:45808276-45808295 | MS.gene062672:CDS | 25.0% |
| !!! | TTTTTGTTTTTGGTTACGAA+TGG | - | chr6.4:45807296-45807315 | MS.gene062672:CDS | 25.0% |
| ACTGGTTATTCAGTAGTTTA+GGG | - | chr6.4:45808951-45808970 | MS.gene062672:CDS | 30.0% | |
| AGCACATAGAGTGATAAATA+GGG | + | chr6.4:45808087-45808106 | None:intergenic | 30.0% | |
| ATCATTCAGACCTTGAAATA+TGG | + | chr6.4:45808021-45808040 | None:intergenic | 30.0% | |
| CAGTCTAGTTAACTATACAA+AGG | + | chr6.4:45807329-45807348 | None:intergenic | 30.0% | |
| GATTGTATAGGAGTAATTGA+TGG | - | chr6.4:45808146-45808165 | MS.gene062672:CDS | 30.0% | |
| TAGCACATAGAGTGATAAAT+AGG | + | chr6.4:45808088-45808107 | None:intergenic | 30.0% | |
| TATAGTTAACTAGACTGCAA+AGG | - | chr6.4:45807332-45807351 | MS.gene062672:CDS | 30.0% | |
| TGAAATAATAGTAGGGAGAT+GGG | + | chr6.4:45808125-45808144 | None:intergenic | 30.0% | |
| TGACGACTTCTTGAATAAAT+GGG | - | chr6.4:45809090-45809109 | MS.gene062672:CDS | 30.0% | |
| TTAAGTATTCTTGGTCAACA+AGG | + | chr6.4:45808664-45808683 | None:intergenic | 30.0% | |
| TTCTCAAACAATTCAAATGG+AGG | + | chr6.4:45807267-45807286 | None:intergenic | 30.0% | |
| TTGACGACTTCTTGAATAAA+TGG | - | chr6.4:45809089-45809108 | MS.gene062672:CDS | 30.0% | |
| ! | CAAATCTAGTTTGAAAACAG+AGG | + | chr6.4:45807447-45807466 | None:intergenic | 30.0% |
| ! | GTTTTATGCATGATTGGAAT+TGG | - | chr6.4:45807466-45807485 | MS.gene062672:intron | 30.0% |
| !! | GCGATATTTTTAAACGTCAT+TGG | - | chr6.4:45807826-45807845 | MS.gene062672:CDS | 30.0% |
| !!! | AAGGGTTTACTTTTTTGCTT+TGG | - | chr6.4:45807148-45807167 | MS.gene062672:CDS | 30.0% |
| AACAACTCCTTTGCATTTCT+TGG | + | chr6.4:45808761-45808780 | None:intergenic | 35.0% | |
| AATGAGAATGCATTCTGTTC+TGG | + | chr6.4:45809043-45809062 | None:intergenic | 35.0% | |
| AATTTCCCACAAATTCCTCA+AGG | - | chr6.4:45808356-45808375 | MS.gene062672:CDS | 35.0% | |
| ACCAGTCATTTCTTTCTTCA+CGG | + | chr6.4:45808937-45808956 | None:intergenic | 35.0% | |
| AGAGTGAAAAAAGAATGCCA+TGG | - | chr6.4:45807219-45807238 | MS.gene062672:CDS | 35.0% | |
| ATTTGTGGGAAATTCTGATC+TGG | + | chr6.4:45808350-45808369 | None:intergenic | 35.0% | |
| CAAAGGAGTTGTTCAATCAT+AGG | - | chr6.4:45808768-45808787 | MS.gene062672:intron | 35.0% | |
| CATCTCCCTACTATTATTTC+AGG | - | chr6.4:45808124-45808143 | MS.gene062672:CDS | 35.0% | |
| CATGTGAGTTTGTGTTTCAT+AGG | - | chr6.4:45808569-45808588 | MS.gene062672:intron | 35.0% | |
| CTATGAAACACAAACTCACA+TGG | + | chr6.4:45808571-45808590 | None:intergenic | 35.0% | |
| CTGAAATAATAGTAGGGAGA+TGG | + | chr6.4:45808126-45808145 | None:intergenic | 35.0% | |
| CTGGTTATTCAGTAGTTTAG+GGG | - | chr6.4:45808952-45808971 | MS.gene062672:CDS | 35.0% | |
| TAATAGAGATGAAAACCTCC+CGG | + | chr6.4:45807199-45807218 | None:intergenic | 35.0% | |
| TCACTCTATTACGTTCACTA+TGG | + | chr6.4:45807852-45807871 | None:intergenic | 35.0% | |
| TCATTTGTCAATGTCGTGTT+CGG | - | chr6.4:45808542-45808561 | MS.gene062672:intron | 35.0% | |
| TCTCGATTTCGCAATAAGAA+AGG | - | chr6.4:45808206-45808225 | MS.gene062672:CDS | 35.0% | |
| TCTTGAATAAATGGGACAAG+TGG | - | chr6.4:45809098-45809117 | MS.gene062672:CDS | 35.0% | |
| TGAACGTAATAGAGTGATTC+AGG | - | chr6.4:45807855-45807874 | MS.gene062672:intron | 35.0% | |
| TGAGTCTGAAAAGAATACTG+AGG | + | chr6.4:45808869-45808888 | None:intergenic | 35.0% | |
| TGGTTATTCAGTAGTTTAGG+GGG | - | chr6.4:45808953-45808972 | MS.gene062672:CDS | 35.0% | |
| TTAGCACCTCTAAACTCATA+AGG | + | chr6.4:45808731-45808750 | None:intergenic | 35.0% | |
| TTCCTATGAAACAAATCCAG+AGG | + | chr6.4:45808634-45808653 | None:intergenic | 35.0% | |
| TTTGTGGGAAATTCTGATCT+GGG | + | chr6.4:45808349-45808368 | None:intergenic | 35.0% | |
| ! | ACTTTTGTCGTGAAATGTTG+CGG | - | chr6.4:45807710-45807729 | MS.gene062672:CDS | 35.0% |
| ! | AGTATTCTTTTCAGACTCAG+CGG | - | chr6.4:45808870-45808889 | MS.gene062672:CDS | 35.0% |
| ! | GACTGGTTATTCAGTAGTTT+AGG | - | chr6.4:45808950-45808969 | MS.gene062672:CDS | 35.0% |
| ! | GATTTCTTGCTCCTTTTCAA+GGG | - | chr6.4:45808693-45808712 | MS.gene062672:intron | 35.0% |
| ! | GTTTGAAAACAGAGGTATGT+TGG | + | chr6.4:45807439-45807458 | None:intergenic | 35.0% |
| ! | TTCCTCTGGATTTGTTTCAT+AGG | - | chr6.4:45808629-45808648 | MS.gene062672:intron | 35.0% |
| !! | ATTTCTTGCTCCTTTTCAAG+GGG | - | chr6.4:45808694-45808713 | MS.gene062672:intron | 35.0% |
| AAAAAGAATGCCATGGTTGC+AGG | - | chr6.4:45807226-45807245 | MS.gene062672:CDS | 40.0% | |
| AAAAGAATGCCATGGTTGCA+GGG | - | chr6.4:45807227-45807246 | MS.gene062672:CDS | 40.0% | |
| AACGAACCTTGAGGAATTTG+TGG | + | chr6.4:45808365-45808384 | None:intergenic | 40.0% | |
| AAGCAAGTGCATCAATGTGT+TGG | - | chr6.4:45807103-45807122 | MS.gene062672:CDS | 40.0% | |
| AATAGAGATGAAAACCTCCC+GGG | + | chr6.4:45807198-45807217 | None:intergenic | 40.0% | |
| AATCGAGATTGATCTTTGGC+CGG | + | chr6.4:45808194-45808213 | None:intergenic | 40.0% | |
| AATGTGTTGGATGAGATGCA+AGG | - | chr6.4:45807116-45807135 | MS.gene062672:CDS | 40.0% | |
| AATTCTGATCTGGGTCATCA+AGG | + | chr6.4:45808340-45808359 | None:intergenic | 40.0% | |
| ACGAACCTTGAGGAATTTGT+GGG | + | chr6.4:45808364-45808383 | None:intergenic | 40.0% | |
| ACTCCTTTGCATTTCTTGGT+AGG | + | chr6.4:45808757-45808776 | None:intergenic | 40.0% | |
| AGATGCAAGGTCTTGATGAA+AGG | - | chr6.4:45807129-45807148 | MS.gene062672:CDS | 40.0% | |
| AGCAGCTGCTTCAAAAATGA+GGG | - | chr6.4:45807043-45807062 | MS.gene062672:CDS | 40.0% | |
| AGTCATTTCTTTCTTCACGG+CGG | + | chr6.4:45808934-45808953 | None:intergenic | 40.0% | |
| CATAATGCTAACGAACCTTG+AGG | + | chr6.4:45808374-45808393 | None:intergenic | 40.0% | |
| CATGTATTTCAGAAGCTGTG+TGG | - | chr6.4:45807742-45807761 | MS.gene062672:CDS | 40.0% | |
| CTAGCACTGTTGAGAATTTC+TGG | + | chr6.4:45807991-45808010 | None:intergenic | 40.0% | |
| GAGGAGCAAGTTTCATGATT+GGG | + | chr6.4:45808850-45808869 | None:intergenic | 40.0% | |
| GATGATGCGAACATGTTAGA+CGG | - | chr6.4:45806927-45806946 | MS.gene062672:CDS | 40.0% | |
| GATGCAAGGTCTTGATGAAA+GGG | - | chr6.4:45807130-45807149 | MS.gene062672:CDS | 40.0% | |
| GCGAAATCGAGATTGATCTT+TGG | + | chr6.4:45808198-45808217 | None:intergenic | 40.0% | |
| GGGTGATATTGACATGGAAT+TGG | - | chr6.4:45807561-45807580 | MS.gene062672:intron | 40.0% | |
| GGTTATTCAGTAGTTTAGGG+GGG | - | chr6.4:45808954-45808973 | MS.gene062672:CDS | 40.0% | |
| GTAATAGAGTGATTCAGGAG+CGG | - | chr6.4:45807860-45807879 | MS.gene062672:intron | 40.0% | |
| GTACGAACACGTTTGATCAA+AGG | - | chr6.4:45808439-45808458 | MS.gene062672:CDS | 40.0% | |
| TACAGATACACCAATCAGCA+CGG | - | chr6.4:45807540-45807559 | MS.gene062672:intron | 40.0% | |
| TAGCAGCTGCTTCAAAAATG+AGG | - | chr6.4:45807042-45807061 | MS.gene062672:CDS | 40.0% | |
| TAGCCTACCAAGAAATGCAA+AGG | - | chr6.4:45808751-45808770 | MS.gene062672:intron | 40.0% | |
| TATCACGTAACATGGCTCTT+TGG | + | chr6.4:45807777-45807796 | None:intergenic | 40.0% | |
| TGACATGGAATTGGATGAGA+TGG | - | chr6.4:45807570-45807589 | MS.gene062672:intron | 40.0% | |
| TGAGGAGCAAGTTTCATGAT+TGG | + | chr6.4:45808851-45808870 | None:intergenic | 40.0% | |
| ! | CAAAATTTTCCCTGCAACCA+TGG | + | chr6.4:45807239-45807258 | None:intergenic | 40.0% |
| ! | GGATTTCTTGCTCCTTTTCA+AGG | - | chr6.4:45808692-45808711 | MS.gene062672:intron | 40.0% |
| ! | GTATTCTTTTCAGACTCAGC+GGG | - | chr6.4:45808871-45808890 | MS.gene062672:CDS | 40.0% |
| ! | TACCAGCCTTATGAGTTTAG+AGG | - | chr6.4:45808722-45808741 | MS.gene062672:intron | 40.0% |
| ! | TGAATTTTTGCAACCTCCTG+AGG | - | chr6.4:45807954-45807973 | MS.gene062672:intron | 40.0% |
| !! | ACCAGAAGTATCACGTAACA+TGG | + | chr6.4:45807785-45807804 | None:intergenic | 40.0% |
| !! | TTCATTTTTCCTGGTTGGGA+AGG | - | chr6.4:45808281-45808300 | MS.gene062672:CDS | 40.0% |
| !! | TTTATGGCAGAAGTGCTGAA+TGG | - | chr6.4:45807679-45807698 | MS.gene062672:CDS | 40.0% |
| !!! | CTGCAAGCACATTTTGAGAT+AGG | + | chr6.4:45808235-45808254 | None:intergenic | 40.0% |
| ACAGATACACCAATCAGCAC+GGG | - | chr6.4:45807541-45807560 | MS.gene062672:intron | 45.0% | |
| ACCCAGGAGATGTGGATTTA+TGG | - | chr6.4:45807663-45807682 | MS.gene062672:CDS | 45.0% | |
| ATCTCCTGGGTGATAAACCA+CGG | + | chr6.4:45807654-45807673 | None:intergenic | 45.0% | |
| ATGGCTTTCGATGATGAGGA+TGG | - | chr6.4:45806888-45806907 | MS.gene062672:CDS | 45.0% | |
| CAAGCTAGTGTTCCAACTAG+TGG | - | chr6.4:45806960-45806979 | MS.gene062672:CDS | 45.0% | |
| CACCTCTAAACTCATAAGGC+TGG | + | chr6.4:45808727-45808746 | None:intergenic | 45.0% | |
| GATGATGAGGATGGTTCTTC+AGG | - | chr6.4:45806897-45806916 | MS.gene062672:CDS | 45.0% | |
| GCAAATTCCTGCACATGTTC+CGG | - | chr6.4:45808172-45808191 | MS.gene062672:CDS | 45.0% | |
| GCCATAAATCCACATCTCCT+GGG | + | chr6.4:45807667-45807686 | None:intergenic | 45.0% | |
| GCCATGTTACGTGATACTTC+TGG | - | chr6.4:45807781-45807800 | MS.gene062672:CDS | 45.0% | |
| GCCGTGAAGAAAGAAATGAC+TGG | - | chr6.4:45808933-45808952 | MS.gene062672:CDS | 45.0% | |
| TGCCATAAATCCACATCTCC+TGG | + | chr6.4:45807668-45807687 | None:intergenic | 45.0% | |
| TTGAGAATCACCCTAATGCC+CGG | - | chr6.4:45807177-45807196 | MS.gene062672:CDS | 45.0% | |
| TTGTCGTGAAATGTTGCGGA+TGG | - | chr6.4:45807714-45807733 | MS.gene062672:CDS | 45.0% | |
| TTTGTCAATGTCGTGTTCGG+TGG | - | chr6.4:45808545-45808564 | MS.gene062672:intron | 45.0% | |
| ! | TCAATATCACCCGTGCTGAT+TGG | + | chr6.4:45807553-45807572 | None:intergenic | 45.0% |
| ! | TCTGGTGATGTTGTATCCTC+AGG | + | chr6.4:45807973-45807992 | None:intergenic | 45.0% |
| ! | TGGCATCACCAGAAGCTTTT+CGG | + | chr6.4:45807001-45807020 | None:intergenic | 45.0% |
| !! | TTGCTCCTTTTCAAGGGGTT+CGG | - | chr6.4:45808699-45808718 | MS.gene062672:intron | 45.0% |
| AACTAGTGGTGGTCGGAAGA+GGG | - | chr6.4:45806974-45806993 | MS.gene062672:CDS | 50.0% | |
| AGCAGCTGCTATCTGCATCA+TGG | + | chr6.4:45807033-45807052 | None:intergenic | 50.0% | |
| ATGAAAACCTCCCGGGCATT+AGG | + | chr6.4:45807191-45807210 | None:intergenic | 50.0% | |
| CACGTAACATGGCTCTTTGG+CGG | + | chr6.4:45807774-45807793 | None:intergenic | 50.0% | |
| CAGCACGGGTGATATTGACA+TGG | - | chr6.4:45807555-45807574 | MS.gene062672:intron | 50.0% | |
| CTAACAAAACAGCCTTCCCG+TGG | - | chr6.4:45807634-45807653 | MS.gene062672:CDS | 50.0% | |
| CTGCATCATGGCATCCACTA+TGG | + | chr6.4:45807021-45807040 | None:intergenic | 50.0% | |
| GCTAGTGTTCCAACTAGTGG+TGG | - | chr6.4:45806963-45806982 | MS.gene062672:CDS | 50.0% | |
| GGATGAGATGGAACTCGTTG+CGG | - | chr6.4:45807582-45807601 | MS.gene062672:intron | 50.0% | |
| GGTGATGTTGTATCCTCAGG+AGG | + | chr6.4:45807970-45807989 | None:intergenic | 50.0% | |
| GGTTTATCACCCAGGAGATG+TGG | - | chr6.4:45807655-45807674 | MS.gene062672:CDS | 50.0% | |
| GTGTTCCAACTAGTGGTGGT+CGG | - | chr6.4:45806967-45806986 | MS.gene062672:CDS | 50.0% | |
| TAGTTTAGGGGGGACATTCG+TGG | - | chr6.4:45808964-45808983 | MS.gene062672:CDS | 50.0% | |
| TCTCCTGGGTGATAAACCAC+GGG | + | chr6.4:45807653-45807672 | None:intergenic | 50.0% | |
| TGAAAACCTCCCGGGCATTA+GGG | + | chr6.4:45807190-45807209 | None:intergenic | 50.0% | |
| TGAACATCGGGAAGTTCGTC+AGG | + | chr6.4:45809004-45809023 | None:intergenic | 50.0% | |
| TGAGAATCACCCTAATGCCC+GGG | - | chr6.4:45807178-45807197 | MS.gene062672:CDS | 50.0% | |
| TGCCTTTAACACCCGTGAGT+CGG | + | chr6.4:45808315-45808334 | None:intergenic | 50.0% | |
| ! | AGCTTCTGGTGATGCCATAG+TGG | - | chr6.4:45807004-45807023 | MS.gene062672:CDS | 50.0% |
| ! | CGTTTGATCAAAGGCGTGTC+TGG | - | chr6.4:45808448-45808467 | MS.gene062672:CDS | 50.0% |
| ! | TGGTACCGAACCCCTTGAAA+AGG | + | chr6.4:45808707-45808726 | None:intergenic | 50.0% |
| !! | AAGGTTCTGTCACCGACTCA+CGG | - | chr6.4:45808300-45808319 | MS.gene062672:CDS | 50.0% |
| AAGAGGGGCCGAAAAGCTTC+TGG | - | chr6.4:45806990-45807009 | MS.gene062672:CDS | 55.0% | |
| ACTAGTGGTGGTCGGAAGAG+GGG | - | chr6.4:45806975-45806994 | MS.gene062672:CDS | 55.0% | |
| CAACTAGTGGTGGTCGGAAG+AGG | - | chr6.4:45806973-45806992 | MS.gene062672:CDS | 55.0% | |
| CTCTTCCGACCACCACTAGT+TGG | + | chr6.4:45806975-45806994 | None:intergenic | 55.0% | |
| CTGGGTGATAAACCACGGGA+AGG | + | chr6.4:45807649-45807668 | None:intergenic | 55.0% | |
| CTTCCCGTGGTTTATCACCC+AGG | - | chr6.4:45807647-45807666 | MS.gene062672:CDS | 55.0% | |
| GAGGATGGTTCTTCAGGCTC+AGG | - | chr6.4:45806903-45806922 | MS.gene062672:CDS | 55.0% | |
| GTGACAGAACCTTCCCAACC+AGG | + | chr6.4:45808293-45808312 | None:intergenic | 55.0% | |
| TCAGGAGCGGTTTCAGCACT+CGG | - | chr6.4:45807873-45807892 | MS.gene062672:intron | 55.0% | |
| TCTTTGGCCGGAACATGTGC+AGG | + | chr6.4:45808182-45808201 | None:intergenic | 55.0% | |
| !! | AGGTTCTGTCACCGACTCAC+GGG | - | chr6.4:45808301-45808320 | MS.gene062672:CDS | 55.0% |
| !! | CACCGACTCACGGGTGTTAA+AGG | - | chr6.4:45808310-45808329 | MS.gene062672:CDS | 55.0% |
| CAGGAGCGGTTTCAGCACTC+GGG | - | chr6.4:45807874-45807893 | MS.gene062672:intron | 60.0% | |
| GAATCACCCTAATGCCCGGG+AGG | - | chr6.4:45807181-45807200 | MS.gene062672:CDS | 60.0% | |
| !! | CGTGTCAGTGTCGACCGTGT+CGG | + | chr6.4:45808477-45808496 | None:intergenic | 60.0% |
| GAACTCGTTGCGGCTGCTGC+TGG | - | chr6.4:45807592-45807611 | MS.gene062672:intron | 65.0% | |
| ! | GGCGTGTCTGGCTTCCGACA+CGG | - | chr6.4:45808460-45808479 | MS.gene062672:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 45806888 | 45809123 | 45806888 | ID=MS.gene062672 |
| chr6.4 | mRNA | 45806888 | 45809123 | 45806888 | ID=MS.gene062672.t1;Parent=MS.gene062672 |
| chr6.4 | exon | 45808809 | 45809123 | 45808809 | ID=MS.gene062672.t1.exon1;Parent=MS.gene062672.t1 |
| chr6.4 | CDS | 45808809 | 45809123 | 45808809 | ID=cds.MS.gene062672.t1;Parent=MS.gene062672.t1 |
| chr6.4 | exon | 45807982 | 45808503 | 45807982 | ID=MS.gene062672.t1.exon2;Parent=MS.gene062672.t1 |
| chr6.4 | CDS | 45807982 | 45808503 | 45807982 | ID=cds.MS.gene062672.t1;Parent=MS.gene062672.t1 |
| chr6.4 | exon | 45807634 | 45807865 | 45807634 | ID=MS.gene062672.t1.exon3;Parent=MS.gene062672.t1 |
| chr6.4 | CDS | 45807634 | 45807865 | 45807634 | ID=cds.MS.gene062672.t1;Parent=MS.gene062672.t1 |
| chr6.4 | exon | 45806888 | 45807360 | 45806888 | ID=MS.gene062672.t1.exon4;Parent=MS.gene062672.t1 |
| chr6.4 | CDS | 45806888 | 45807360 | 45806888 | ID=cds.MS.gene062672.t1;Parent=MS.gene062672.t1 |
| Gene Sequence |
| Protein sequence |
