Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062767.t1 | ADV15621.1 | 96.2 | 290 | 9 | 1 | 1 | 288 | 1 | 290 | 2.00E-135 | 491.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062767.t1 | O48722 | 63.3 | 240 | 76 | 2 | 61 | 288 | 60 | 299 | 4.7e-80 | 299.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062767.t1 | E7ECB3 | 96.2 | 290 | 9 | 1 | 1 | 288 | 1 | 290 | 1.5e-135 | 491.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene062767 | 0.81617 | 6.35E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene062767 | 0.815352 | 9.66E-52 | -1.69E-46 |
| MS.gene049170 | MS.gene062767 | 0.80273 | 4.88E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene062767 | 0.836792 | 7.60E-57 | -1.69E-46 |
| MS.gene049758 | MS.gene062767 | 0.840413 | 8.83E-58 | -1.69E-46 |
| MS.gene049910 | MS.gene062767 | 0.818918 | 1.53E-52 | -1.69E-46 |
| MS.gene050231 | MS.gene062767 | 0.836047 | 1.18E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene062767 | 0.867177 | 1.66E-65 | -1.69E-46 |
| MS.gene050426 | MS.gene062767 | -0.811355 | 7.30E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene062767 | 0.809006 | 2.34E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene062767 | 0.800475 | 1.42E-48 | -1.69E-46 |
| MS.gene050642 | MS.gene062767 | 0.821514 | 3.88E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene062767 | 0.837702 | 4.45E-57 | -1.69E-46 |
| MS.gene050812 | MS.gene062767 | 0.830465 | 2.89E-55 | -1.69E-46 |
| MS.gene050820 | MS.gene062767 | 0.803603 | 3.22E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene062767 | 0.811394 | 7.16E-51 | -1.69E-46 |
| MS.gene051525 | MS.gene062767 | 0.820493 | 6.66E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene062767 | 0.869708 | 2.53E-66 | -1.69E-46 |
| MS.gene051663 | MS.gene062767 | 0.80621 | 9.19E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene062767 | 0.852451 | 4.58E-61 | -1.69E-46 |
| MS.gene051983 | MS.gene062767 | 0.829959 | 3.84E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene062767 | -0.836627 | 8.38E-57 | -1.69E-46 |
| MS.gene052077 | MS.gene062767 | 0.816134 | 6.47E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene062767 | 0.842573 | 2.38E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene062767 | 0.832365 | 9.86E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene062767 | 0.821864 | 3.22E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene062767 | 0.818375 | 2.03E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene062767 | 0.81625 | 6.09E-52 | -1.69E-46 |
| MS.gene052767 | MS.gene062767 | 0.804805 | 1.81E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene062767 | 0.804326 | 2.28E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene062767 | 0.875603 | 2.71E-68 | -1.69E-46 |
| MS.gene053928 | MS.gene062767 | 0.824617 | 7.33E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene062767 | 0.818806 | 1.62E-52 | -1.69E-46 |
| MS.gene054183 | MS.gene062767 | 0.826902 | 2.10E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene062767 | 0.812453 | 4.21E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene062767 | 0.822596 | 2.18E-53 | -1.69E-46 |
| MS.gene054719 | MS.gene062767 | 0.845495 | 3.92E-59 | -1.69E-46 |
| MS.gene054918 | MS.gene062767 | 0.822043 | 2.93E-53 | -1.69E-46 |
| MS.gene054920 | MS.gene062767 | 0.821334 | 4.27E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene062767 | 0.811577 | 6.53E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene062767 | 0.822815 | 1.94E-53 | -1.69E-46 |
| MS.gene054983 | MS.gene062767 | 0.817714 | 2.86E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene062767 | 0.81761 | 3.02E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene062767 | 0.815728 | 7.97E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene062767 | 0.823536 | 1.31E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene062767 | 0.847247 | 1.31E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene062767 | 0.850036 | 2.20E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene062767 | 0.833247 | 5.95E-56 | -1.69E-46 |
| MS.gene055604 | MS.gene062767 | 0.828908 | 6.92E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene062767 | 0.876055 | 1.89E-68 | -1.69E-46 |
| MS.gene056612 | MS.gene062767 | 0.825205 | 5.32E-54 | -1.69E-46 |
| MS.gene056659 | MS.gene062767 | 0.813685 | 2.26E-51 | -1.69E-46 |
| MS.gene056723 | MS.gene062767 | 0.836649 | 8.27E-57 | -1.69E-46 |
| MS.gene056899 | MS.gene062767 | -0.800555 | 1.36E-48 | -1.69E-46 |
| MS.gene056902 | MS.gene062767 | 0.801476 | 8.84E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene062767 | 0.823007 | 1.75E-53 | -1.69E-46 |
| MS.gene05702 | MS.gene062767 | 0.819897 | 9.13E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene062767 | 0.860727 | 1.69E-63 | -1.69E-46 |
| MS.gene057245 | MS.gene062767 | 0.818615 | 1.79E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene062767 | 0.802355 | 5.83E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene062767 | 0.80216 | 6.40E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene062767 | 0.821645 | 3.62E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene062767 | 0.858743 | 6.68E-63 | -1.69E-46 |
| MS.gene05811 | MS.gene062767 | 0.859515 | 3.92E-63 | -1.69E-46 |
| MS.gene058142 | MS.gene062767 | 0.864431 | 1.22E-64 | -1.69E-46 |
| MS.gene058233 | MS.gene062767 | 0.801102 | 1.05E-48 | -1.69E-46 |
| MS.gene058276 | MS.gene062767 | 0.824431 | 8.10E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene062767 | 0.817733 | 2.83E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene062767 | 0.826994 | 2.00E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene062767 | 0.801781 | 7.66E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene062767 | 0.817105 | 3.92E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene062767 | 0.801855 | 7.39E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene062767 | 0.861473 | 1.00E-63 | -1.69E-46 |
| MS.gene059141 | MS.gene062767 | 0.816008 | 6.90E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene062767 | 0.829678 | 4.50E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene062767 | 0.845646 | 3.57E-59 | -1.69E-46 |
| MS.gene059518 | MS.gene062767 | 0.805792 | 1.12E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene062767 | 0.800175 | 1.63E-48 | -1.69E-46 |
| MS.gene059688 | MS.gene062767 | 0.831283 | 1.82E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene062767 | 0.81538 | 9.53E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene062767 | 0.817169 | 3.79E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene062767 | 0.868027 | 8.86E-66 | -1.69E-46 |
| MS.gene060403 | MS.gene062767 | 0.803273 | 3.77E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene062767 | 0.805177 | 1.51E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene062767 | 0.846823 | 1.70E-59 | -1.69E-46 |
| MS.gene061049 | MS.gene062767 | 0.830441 | 2.93E-55 | -1.69E-46 |
| MS.gene061154 | MS.gene062767 | 0.830342 | 3.10E-55 | -1.69E-46 |
| MS.gene061159 | MS.gene062767 | 0.800835 | 1.20E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062767.t1 | MTR_1g019970 | 93.793 | 290 | 15 | 2 | 1 | 288 | 1 | 289 | 0.0 | 511 |
| MS.gene062767.t1 | MTR_8g019320 | 49.321 | 221 | 107 | 2 | 67 | 287 | 65 | 280 | 2.12e-74 | 229 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062767.t1 | AT2G26550 | 59.766 | 256 | 91 | 1 | 45 | 288 | 44 | 299 | 4.00e-103 | 303 |
| MS.gene062767.t1 | AT2G26550 | 56.458 | 271 | 91 | 2 | 45 | 288 | 44 | 314 | 4.96e-99 | 293 |
| MS.gene062767.t1 | AT2G26550 | 49.518 | 311 | 90 | 3 | 45 | 288 | 44 | 354 | 5.94e-90 | 271 |
| MS.gene062767.t1 | AT2G26550 | 60.000 | 210 | 72 | 1 | 61 | 258 | 60 | 269 | 6.30e-82 | 248 |
| MS.gene062767.t1 | AT2G26670 | 50.901 | 222 | 104 | 2 | 67 | 287 | 64 | 281 | 7.87e-81 | 246 |
| MS.gene062767.t1 | AT1G69720 | 51.584 | 221 | 104 | 2 | 67 | 287 | 67 | 284 | 5.88e-78 | 238 |
| MS.gene062767.t1 | AT1G69720 | 51.584 | 221 | 104 | 2 | 67 | 287 | 67 | 284 | 5.88e-78 | 238 |
| MS.gene062767.t1 | AT1G58300 | 42.586 | 263 | 133 | 3 | 26 | 287 | 37 | 282 | 2.05e-70 | 219 |
| MS.gene062767.t1 | AT2G26670 | 42.601 | 223 | 77 | 2 | 65 | 287 | 62 | 233 | 4.37e-60 | 191 |
| MS.gene062767.t1 | AT1G69720 | 48.447 | 161 | 80 | 2 | 67 | 227 | 67 | 224 | 4.55e-48 | 160 |
Find 66 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAAGTTCCTCTAAATATT+TGG | 0.110208 | 1.4:+3339242 | None:intergenic |
| GAGAATGATGATTCTTCTTC+TGG | 0.223274 | 1.4:+3340415 | None:intergenic |
| GAAAGGCTTTCTTCGATTCT+TGG | 0.256872 | 1.4:-3340150 | MS.gene062767:CDS |
| CCTCATCTCTTCGGTGATTC+CGG | 0.265544 | 1.4:+3340283 | None:intergenic |
| CGAAGAAAGCCTTTCATAGA+AGG | 0.348541 | 1.4:+3340158 | None:intergenic |
| ACTCCAGCTCCTTACCTTCC+AGG | 0.374412 | 1.4:+3337705 | None:intergenic |
| GAACAATCTGTCCCATAAAC+TGG | 0.386716 | 1.4:+3337462 | None:intergenic |
| GATGCATACTTGAGGAAAAC+TGG | 0.393679 | 1.4:-3339360 | MS.gene062767:CDS |
| GTGATTCCGGTGGTTTCACC+AGG | 0.410208 | 1.4:+3340296 | None:intergenic |
| TTTGTCGCTGTGGAGTTTCA+TGG | 0.410902 | 1.4:+3340253 | None:intergenic |
| TACATATGCCAAATATTTAG+AGG | 0.415258 | 1.4:-3339250 | MS.gene062767:CDS |
| ATAGAAGGATACCACGTGTC+AGG | 0.419281 | 1.4:+3340173 | None:intergenic |
| AAAATGGATATTGTAGAAAT+GGG | 0.422336 | 1.4:+3339194 | None:intergenic |
| TTCTTCTTCTTATCCACCGT+TGG | 0.435389 | 1.4:-3340351 | MS.gene062767:CDS |
| CGAACGCATTGTTGATGATT+CGG | 0.450060 | 1.4:-3340099 | MS.gene062767:CDS |
| TTCTCATATAACTGCTGGCC+AGG | 0.466119 | 1.4:-3339172 | MS.gene062767:CDS |
| TTAGGTATCTGAAAAGCTCC+TGG | 0.483336 | 1.4:-3337723 | MS.gene062767:intron |
| ATTTGTGCAGCATTGGGGTC+GGG | 0.486709 | 1.4:-3337525 | MS.gene062767:intron |
| GGTGTTGAAGCGTGTTCGAT+TGG | 0.492898 | 1.4:+3340436 | None:intergenic |
| GAAGGATCTAGAATGGTTGA+AGG | 0.493575 | 1.4:-3339313 | MS.gene062767:CDS |
| TATGTAGTACCAGGTGAACT+TGG | 0.493729 | 1.4:+3339267 | None:intergenic |
| AGTACCAGGTGAACTTGGAT+TGG | 0.500411 | 1.4:+3339272 | None:intergenic |
| AGTGTTGATGATGGTGGGAA+TGG | 0.502339 | 1.4:+3340461 | None:intergenic |
| AGGAGCTGGAGTTCTGCAAA+TGG | 0.505314 | 1.4:-3337694 | MS.gene062767:CDS |
| AATTTGTGCAGCATTGGGGT+CGG | 0.511624 | 1.4:-3337526 | MS.gene062767:intron |
| CCATGGTTGTTGCAGTTGAG+TGG | 0.513441 | 1.4:+3340487 | None:intergenic |
| ATAAGAAGAAGAAGATGAAG+AGG | 0.514379 | 1.4:+3340361 | None:intergenic |
| TGAAAAGCTCCTGGAAGGTA+AGG | 0.515112 | 1.4:-3337714 | MS.gene062767:CDS |
| GTACCAGGTGAACTTGGATT+GGG | 0.518612 | 1.4:+3339273 | None:intergenic |
| GGCAACGAACCTCATCTCTT+CGG | 0.520653 | 1.4:+3340274 | None:intergenic |
| CAAATGGGAAGGAGATGTAC+AGG | 0.523655 | 1.4:-3337678 | MS.gene062767:CDS |
| AGTGGTATTGTTGACGGTGT+TGG | 0.527238 | 1.4:+3340229 | None:intergenic |
| GTGTTGAAGCGTGTTCGATT+GGG | 0.527957 | 1.4:+3340437 | None:intergenic |
| AACAGAAGTGGTATTGTTGA+CGG | 0.534137 | 1.4:+3340223 | None:intergenic |
| CATCTCTTCGGTGATTCCGG+TGG | 0.534391 | 1.4:+3340286 | None:intergenic |
| ATACTTGAGGAAAACTGGAT+TGG | 0.541626 | 1.4:-3339355 | MS.gene062767:CDS |
| GGAGCTGGAGTTCTGCAAAT+GGG | 0.549742 | 1.4:-3337693 | MS.gene062767:CDS |
| CATGGTTGTTGCAGTTGAGT+GGG | 0.555894 | 1.4:+3340488 | None:intergenic |
| CTAGAATGGTTGAAGGAACA+AGG | 0.560120 | 1.4:-3339306 | MS.gene062767:CDS |
| ACTGGATTGGAAAGATCTGA+AGG | 0.563903 | 1.4:-3339342 | MS.gene062767:CDS |
| GCTCCTGGAAGGTAAGGAGC+TGG | 0.564683 | 1.4:-3337708 | MS.gene062767:CDS |
| GTCTTCTACTACAACAGAAG+TGG | 0.573939 | 1.4:+3340211 | None:intergenic |
| TTGGGAAGTGTTGATGATGG+TGG | 0.574296 | 1.4:+3340455 | None:intergenic |
| CTTTACCCTGGTGAAACCAC+CGG | 0.583875 | 1.4:-3340302 | MS.gene062767:CDS |
| TGGCCAGGTTATTACAAAGC+AGG | 0.585011 | 1.4:-3339157 | MS.gene062767:intron |
| ACGTGGTATCCTTCTATGAA+AGG | 0.586528 | 1.4:-3340167 | MS.gene062767:CDS |
| CGATTGGGAAGTGTTGATGA+TGG | 0.589944 | 1.4:+3340452 | None:intergenic |
| GTACCTGCTTTGTAATAACC+TGG | 0.590707 | 1.4:+3339154 | None:intergenic |
| CAAATATTTAGAGGAACTTG+CGG | 0.593836 | 1.4:-3339241 | MS.gene062767:CDS |
| GTATCTGAAAAGCTCCTGGA+AGG | 0.595672 | 1.4:-3337719 | MS.gene062767:CDS |
| TGGGAAGTGTTGATGATGGT+GGG | 0.598542 | 1.4:+3340456 | None:intergenic |
| TAGAAGGATACCACGTGTCA+GGG | 0.599723 | 1.4:+3340174 | None:intergenic |
| CGCTATCGAAAACTTTACCC+TGG | 0.601205 | 1.4:-3340314 | MS.gene062767:CDS |
| TATTTGGCATATGTAGTACC+AGG | 0.604625 | 1.4:+3339258 | None:intergenic |
| ATTCCCAATCCAAGTTCACC+TGG | 0.607725 | 1.4:-3339276 | MS.gene062767:CDS |
| CTGGAGTTCTGCAAATGGGA+AGG | 0.610060 | 1.4:-3337689 | MS.gene062767:CDS |
| TAGAAATGGGAAAGAAACAA+AGG | 0.614055 | 1.4:+3339207 | None:intergenic |
| GAATTGCAGATGCATACTTG+AGG | 0.618600 | 1.4:-3339368 | MS.gene062767:intron |
| CCACTCAACTGCAACAACCA+TGG | 0.631304 | 1.4:-3340487 | MS.gene062767:CDS |
| TTGTAATTTGTGCAGCATTG+GGG | 0.639959 | 1.4:-3337530 | MS.gene062767:intron |
| CCGGAATCACCGAAGAGATG+AGG | 0.642207 | 1.4:-3340283 | MS.gene062767:CDS |
| GAAGCTTAACGTGCTTGCAG+AGG | 0.660843 | 1.4:-3337633 | MS.gene062767:intron |
| TGATTCCGGTGGTTTCACCA+GGG | 0.673875 | 1.4:+3340297 | None:intergenic |
| GTTGTAGTAGAAGACTGTGA+AGG | 0.688185 | 1.4:-3340203 | MS.gene062767:CDS |
| GATGGTGGGAATGGTAACCA+TGG | 0.718374 | 1.4:+3340470 | None:intergenic |
| AAGGACAAATCCCTGACACG+TGG | 0.718573 | 1.4:-3340184 | MS.gene062767:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTAAATTTTTTTAT+AGG | - | chr1.4:3339517-3339536 | MS.gene062767:intron | 0.0% |
| !! | ATCATTCAAAAAAAAAAAAT+TGG | - | chr1.4:3339040-3339059 | MS.gene062767:intron | 10.0% |
| !! | ATTCATTTATTATTCAATAA+TGG | + | chr1.4:3339642-3339661 | None:intergenic | 10.0% |
| !! | TGTTAAATTAAAAAAAATCA+AGG | + | chr1.4:3339977-3339996 | None:intergenic | 10.0% |
| !! | TTCATTTATTATTCAATAAT+GGG | + | chr1.4:3339641-3339660 | None:intergenic | 10.0% |
| !!! | TTTTTGAATGATTTTTTTTT+TGG | + | chr1.4:3339032-3339051 | None:intergenic | 10.0% |
| !! | AATAGTTGTTTATTCAAATA+GGG | - | chr1.4:3338492-3338511 | MS.gene062767:intron | 15.0% |
| !! | TAACAAAATCAAAATCAAAT+TGG | + | chr1.4:3338237-3338256 | None:intergenic | 15.0% |
| !! | TAATAGTTGTTTATTCAAAT+AGG | - | chr1.4:3338491-3338510 | MS.gene062767:intron | 15.0% |
| !! | TCTTTAATAAAGAATTCATT+AGG | + | chr1.4:3340139-3340158 | None:intergenic | 15.0% |
| !!! | ATAAATTTCACAAATGTTTT+AGG | + | chr1.4:3338518-3338537 | None:intergenic | 15.0% |
| !!! | ATTTGATAGAATTTTTTGTT+GGG | - | chr1.4:3339380-3339399 | MS.gene062767:intron | 15.0% |
| !!! | TATTTGATAGAATTTTTTGT+TGG | - | chr1.4:3339379-3339398 | MS.gene062767:intron | 15.0% |
| !!! | TTATACTTATTATTTTTGTG+TGG | - | chr1.4:3340398-3340417 | MS.gene062767:CDS | 15.0% |
| !!! | TTTAATTTAACACAGATATT+AGG | - | chr1.4:3339985-3340004 | MS.gene062767:intron | 15.0% |
| !! | AAAAAGTTAGTGATAAGATA+GGG | - | chr1.4:3339691-3339710 | MS.gene062767:intron | 20.0% |
| !! | AAAAATGGATATTGTAGAAA+TGG | + | chr1.4:3338761-3338780 | None:intergenic | 20.0% |
| !! | AAAATGGATATTGTAGAAAT+GGG | + | chr1.4:3338760-3338779 | None:intergenic | 20.0% |
| !! | AGCTAATTTAAACTTATATG+AGG | - | chr1.4:3339071-3339090 | MS.gene062767:intron | 20.0% |
| !! | ATAATGATAAAACACAAACA+CGG | + | chr1.4:3339490-3339509 | None:intergenic | 20.0% |
| !! | GATTTATTGTTTAACAATCA+AGG | - | chr1.4:3339093-3339112 | MS.gene062767:intron | 20.0% |
| !! | TAAAAAGTTAGTGATAAGAT+AGG | - | chr1.4:3339690-3339709 | MS.gene062767:intron | 20.0% |
| !!! | ACTTTGAATTCATTAATTTG+AGG | - | chr1.4:3337949-3337968 | MS.gene062767:intron | 20.0% |
| !!! | TCGCAAAATAACAAATTTTA+TGG | - | chr1.4:3338359-3338378 | MS.gene062767:intron | 20.0% |
| !!! | TTATTATTCAATAATGGGAA+TGG | + | chr1.4:3339636-3339655 | None:intergenic | 20.0% |
| !!! | TTGATTTGATTTAGTTATGA+TGG | - | chr1.4:3338540-3338559 | MS.gene062767:intron | 20.0% |
| !!! | TTTTTTATAGGTAAGTGAAA+CGG | - | chr1.4:3339529-3339548 | MS.gene062767:intron | 20.0% |
| !!! | TTTTTTTTTAATCCTGATGA+CGG | - | chr1.4:3339238-3339257 | MS.gene062767:CDS | 20.0% |
| ! | AAAAAAGTCATTCCAGTTTA+TGG | - | chr1.4:3340477-3340496 | MS.gene062767:CDS | 25.0% |
| ! | AAAAAGTCATTCCAGTTTAT+GGG | - | chr1.4:3340478-3340497 | MS.gene062767:CDS | 25.0% |
| ! | AAAGTTTCTTATAAGCATAC+AGG | - | chr1.4:3338894-3338913 | MS.gene062767:intron | 25.0% |
| ! | AAATGAATGAAGGAAATATG+TGG | - | chr1.4:3339453-3339472 | MS.gene062767:intron | 25.0% |
| ! | AAGTTTCTTATAAGCATACA+GGG | - | chr1.4:3338895-3338914 | MS.gene062767:intron | 25.0% |
| ! | ACAAAACACTTATAGGATAT+AGG | - | chr1.4:3338301-3338320 | MS.gene062767:intron | 25.0% |
| ! | ACATTGTCTTTCCAATATTT+AGG | - | chr1.4:3340080-3340099 | MS.gene062767:intron | 25.0% |
| ! | ACCTTATACTTTATATCCTT+GGG | - | chr1.4:3339572-3339591 | MS.gene062767:intron | 25.0% |
| ! | AGGATATAAAGTATAAGGTA+AGG | + | chr1.4:3339571-3339590 | None:intergenic | 25.0% |
| ! | ATGCTTAAAGAAATTCTTGA+TGG | + | chr1.4:3340187-3340206 | None:intergenic | 25.0% |
| ! | ATTGTCTTTCCAATATTTAG+GGG | - | chr1.4:3340082-3340101 | MS.gene062767:intron | 25.0% |
| ! | CATTGTCTTTCCAATATTTA+GGG | - | chr1.4:3340081-3340100 | MS.gene062767:intron | 25.0% |
| ! | GAATAATAACTCTTGAATGT+TGG | - | chr1.4:3339878-3339897 | MS.gene062767:intron | 25.0% |
| ! | GATATAAAGTATAAGGTAAG+GGG | + | chr1.4:3339569-3339588 | None:intergenic | 25.0% |
| ! | GGATATAAAGTATAAGGTAA+GGG | + | chr1.4:3339570-3339589 | None:intergenic | 25.0% |
| ! | TAAGTGTTTGTTTGGTTATA+TGG | - | chr1.4:3337914-3337933 | MS.gene062767:intron | 25.0% |
| ! | TACATATGCCAAATATTTAG+AGG | - | chr1.4:3338701-3338720 | MS.gene062767:intron | 25.0% |
| ! | TACCTTATACTTTATATCCT+TGG | - | chr1.4:3339571-3339590 | MS.gene062767:intron | 25.0% |
| ! | TACTAGGAATTCTTTAATTG+TGG | - | chr1.4:3340346-3340365 | MS.gene062767:CDS | 25.0% |
| ! | TTGTGTAACAAAACACTTAT+AGG | - | chr1.4:3338294-3338313 | MS.gene062767:intron | 25.0% |
| ! | TTTCAATTATGGTTGTAGTT+AGG | + | chr1.4:3338447-3338466 | None:intergenic | 25.0% |
| !! | AATCAAATTGGTTTCGTTTA+AGG | + | chr1.4:3338225-3338244 | None:intergenic | 25.0% |
| !! | TAAGCAATGGTTTTCAATTA+TGG | + | chr1.4:3338458-3338477 | None:intergenic | 25.0% |
| !!! | AAGAGTTGAAGTTTTAAGTT+TGG | - | chr1.4:3339798-3339817 | MS.gene062767:intron | 25.0% |
| !!! | ATGCTCATTGTTTTAAATTG+TGG | - | chr1.4:3338334-3338353 | MS.gene062767:intron | 25.0% |
| !!! | ATTTTTTGTTGGGAAATATG+AGG | - | chr1.4:3339390-3339409 | MS.gene062767:intron | 25.0% |
| !!! | GTTTGTAGCTTATTTCTATA+AGG | - | chr1.4:3338169-3338188 | MS.gene062767:intron | 25.0% |
| !!! | TTTTTTTTAATCCTGATGAC+GGG | - | chr1.4:3339239-3339258 | MS.gene062767:CDS | 25.0% |
| !!! | TTTTTTTTTGGCTTTCAAAC+CGG | + | chr1.4:3339020-3339039 | None:intergenic | 25.0% |
| AACTCTAGACATATGGTTAA+AGG | + | chr1.4:3339146-3339165 | None:intergenic | 30.0% | |
| AAGGGAATCCAATCTATTTA+TGG | - | chr1.4:3338841-3338860 | MS.gene062767:intron | 30.0% | |
| ACACAATCATATAAGTGCTT+AGG | + | chr1.4:3338280-3338299 | None:intergenic | 30.0% | |
| ACTCTAGACATATGGTTAAA+GGG | + | chr1.4:3339145-3339164 | None:intergenic | 30.0% | |
| AGGGAATCCAATCTATTTAT+GGG | - | chr1.4:3338842-3338861 | MS.gene062767:intron | 30.0% | |
| AGTTTCTTATAAGCATACAG+GGG | - | chr1.4:3338896-3338915 | MS.gene062767:intron | 30.0% | |
| ATAAGAAGAAGAAGATGAAG+AGG | + | chr1.4:3337593-3337612 | None:intergenic | 30.0% | |
| ATTGTTTAACAATCAAGGTG+TGG | - | chr1.4:3339098-3339117 | MS.gene062767:intron | 30.0% | |
| CAAATATTTAGAGGAACTTG+CGG | - | chr1.4:3338710-3338729 | MS.gene062767:intron | 30.0% | |
| CAGCAGTTATATGAGAAAAA+TGG | + | chr1.4:3338776-3338795 | None:intergenic | 30.0% | |
| CCTTATACTTTATATCCTTG+GGG | - | chr1.4:3339573-3339592 | MS.gene062767:intron | 30.0% | |
| GCAGTTATTAAGTGTTTGTT+TGG | - | chr1.4:3337906-3337925 | MS.gene062767:intron | 30.0% | |
| TAGAAATGGGAAAGAAACAA+AGG | + | chr1.4:3338747-3338766 | None:intergenic | 30.0% | |
| ! | AAATTTTATGGTCTCTGCAA+TGG | - | chr1.4:3338371-3338390 | MS.gene062767:intron | 30.0% |
| ! | AAGATCTGAAGGAATTTTGA+AGG | - | chr1.4:3338620-3338639 | MS.gene062767:intron | 30.0% |
| ! | AATCACGAAGAATTTTGTGT+GGG | - | chr1.4:3339924-3339943 | MS.gene062767:intron | 30.0% |
| ! | ACTTTTCCCATCTCTTAAAA+GGG | - | chr1.4:3338823-3338842 | MS.gene062767:intron | 30.0% |
| ! | AGATGTGCAATTTTTCTTGT+GGG | + | chr1.4:3339329-3339348 | None:intergenic | 30.0% |
| ! | CATTTTTCTCATATAACTGC+TGG | - | chr1.4:3338774-3338793 | MS.gene062767:intron | 30.0% |
| ! | CTTTTTCTCAATCTCACTTA+TGG | + | chr1.4:3339719-3339738 | None:intergenic | 30.0% |
| ! | TAGATGTGCAATTTTTCTTG+TGG | + | chr1.4:3339330-3339349 | None:intergenic | 30.0% |
| !! | GAATTTTGAAGGATCTAGAA+TGG | - | chr1.4:3338631-3338650 | MS.gene062767:intron | 30.0% |
| !! | GCTTATTTCTATAAGGTATC+AGG | - | chr1.4:3338176-3338195 | MS.gene062767:intron | 30.0% |
| !!! | ATTCTGTTGTTGTTGCTTTT+AGG | - | chr1.4:3340210-3340229 | MS.gene062767:CDS | 30.0% |
| AAAGCTCCCCATAAATAGAT+TGG | + | chr1.4:3338852-3338871 | None:intergenic | 35.0% | |
| AACAGAAGTGGTATTGTTGA+CGG | + | chr1.4:3337731-3337750 | None:intergenic | 35.0% | |
| AGAATGAGCAAGGTAATTGT+AGG | - | chr1.4:3340008-3340027 | MS.gene062767:intron | 35.0% | |
| AGAGCTTGTAGAATAAGCAA+TGG | + | chr1.4:3338471-3338490 | None:intergenic | 35.0% | |
| AGATATTAGGAGAATGAGCA+AGG | - | chr1.4:3339998-3340017 | MS.gene062767:intron | 35.0% | |
| AGGTTAAAAATAGCGTTTCG+AGG | - | chr1.4:3337969-3337988 | MS.gene062767:intron | 35.0% | |
| AGTCTTGAGGTTTAACTGTT+TGG | - | chr1.4:3339599-3339618 | MS.gene062767:intron | 35.0% | |
| ATACTTGAGGAAAACTGGAT+TGG | - | chr1.4:3338596-3338615 | MS.gene062767:intron | 35.0% | |
| ATCTATGAGATTCGGATGAT+GGG | - | chr1.4:3339194-3339213 | MS.gene062767:CDS | 35.0% | |
| CCCCAAGGATATAAAGTATA+AGG | + | chr1.4:3339576-3339595 | None:intergenic | 35.0% | |
| CGCAAGTTCCTCTAAATATT+TGG | + | chr1.4:3338712-3338731 | None:intergenic | 35.0% | |
| CTTAAAACTTCAACTCTTCG+AGG | + | chr1.4:3339796-3339815 | None:intergenic | 35.0% | |
| CTTGAATGTTGGATCAGTAA+GGG | - | chr1.4:3339889-3339908 | MS.gene062767:intron | 35.0% | |
| GAAATATGAGGAACAAGAGA+AGG | - | chr1.4:3339402-3339421 | MS.gene062767:intron | 35.0% | |
| GAACAAGAGTGAAGTAGAAT+GGG | - | chr1.4:3339424-3339443 | MS.gene062767:intron | 35.0% | |
| GAGAATGATGATTCTTCTTC+TGG | + | chr1.4:3337539-3337558 | None:intergenic | 35.0% | |
| GGGAATCCAATCTATTTATG+GGG | - | chr1.4:3338843-3338862 | MS.gene062767:intron | 35.0% | |
| GTTTCTTATAAGCATACAGG+GGG | - | chr1.4:3338897-3338916 | MS.gene062767:intron | 35.0% | |
| TATTTGGCATATGTAGTACC+AGG | + | chr1.4:3338696-3338715 | None:intergenic | 35.0% | |
| TCTTGAATGTTGGATCAGTA+AGG | - | chr1.4:3339888-3339907 | MS.gene062767:intron | 35.0% | |
| TCTTTCCAATATTTAGGGGT+GGG | - | chr1.4:3340086-3340105 | MS.gene062767:intron | 35.0% | |
| TTTAAGAGATGGGAAAAGTG+AGG | + | chr1.4:3338822-3338841 | None:intergenic | 35.0% | |
| TTTCTTGTGGGTGTTTGATT+TGG | + | chr1.4:3339317-3339336 | None:intergenic | 35.0% | |
| ! | ATATGTCTAGAGTTCGAATC+CGG | - | chr1.4:3339152-3339171 | MS.gene062767:intron | 35.0% |
| ! | CAATCACGAAGAATTTTGTG+TGG | - | chr1.4:3339923-3339942 | MS.gene062767:intron | 35.0% |
| ! | CACTTTTCCCATCTCTTAAA+AGG | - | chr1.4:3338822-3338841 | MS.gene062767:intron | 35.0% |
| ! | CGGTTTCTTTTTCTAACCAA+CGG | + | chr1.4:3337619-3337638 | None:intergenic | 35.0% |
| ! | CTATTTATGGGGAGCTTTTA+TGG | - | chr1.4:3338854-3338873 | MS.gene062767:intron | 35.0% |
| ! | GTAAGCTAAATCTTGAGTTG+TGG | + | chr1.4:3339774-3339793 | None:intergenic | 35.0% |
| ! | GTTGTAATTTGTGCAGCATT+GGG | - | chr1.4:3340420-3340439 | MS.gene062767:CDS | 35.0% |
| ! | TTGTAATTTGTGCAGCATTG+GGG | - | chr1.4:3340421-3340440 | MS.gene062767:CDS | 35.0% |
| ! | TTTCTTTTTCTAACCAACGG+TGG | + | chr1.4:3337616-3337635 | None:intergenic | 35.0% |
| !! | TGGATTCCCTTTTAAGAGAT+GGG | + | chr1.4:3338832-3338851 | None:intergenic | 35.0% |
| !! | TTGGATTCCCTTTTAAGAGA+TGG | + | chr1.4:3338833-3338852 | None:intergenic | 35.0% |
| AAGAGTGAAGTAGAATGGGA+AGG | - | chr1.4:3339428-3339447 | MS.gene062767:intron | 40.0% | |
| ACGTGGTATCCTTCTATGAA+AGG | - | chr1.4:3337784-3337803 | MS.gene062767:intron | 40.0% | |
| AGAGTGAAGTAGAATGGGAA+GGG | - | chr1.4:3339429-3339448 | MS.gene062767:intron | 40.0% | |
| CATCTATGAGATTCGGATGA+TGG | - | chr1.4:3339193-3339212 | MS.gene062767:CDS | 40.0% | |
| CGAAGAAAGCCTTTCATAGA+AGG | + | chr1.4:3337796-3337815 | None:intergenic | 40.0% | |
| CTAGAATGGTTGAAGGAACA+AGG | - | chr1.4:3338645-3338664 | MS.gene062767:intron | 40.0% | |
| GAAAGGCTTTCTTCGATTCT+TGG | - | chr1.4:3337801-3337820 | MS.gene062767:intron | 40.0% | |
| GAACAATCTGTCCCATAAAC+TGG | + | chr1.4:3340492-3340511 | None:intergenic | 40.0% | |
| GAATTGCAGATGCATACTTG+AGG | - | chr1.4:3338583-3338602 | MS.gene062767:intron | 40.0% | |
| GATGCATACTTGAGGAAAAC+TGG | - | chr1.4:3338591-3338610 | MS.gene062767:intron | 40.0% | |
| GATTTCCCACCCCTAAATAT+TGG | + | chr1.4:3340094-3340113 | None:intergenic | 40.0% | |
| GGAACAAGAGTGAAGTAGAA+TGG | - | chr1.4:3339423-3339442 | MS.gene062767:intron | 40.0% | |
| GGAGATGCATCTATGAGATT+CGG | - | chr1.4:3339186-3339205 | MS.gene062767:CDS | 40.0% | |
| GGATTCGAACTCTAGACATA+TGG | + | chr1.4:3339153-3339172 | None:intergenic | 40.0% | |
| GTACCTGCTTTGTAATAACC+TGG | + | chr1.4:3338800-3338819 | None:intergenic | 40.0% | |
| GTCTTCTACTACAACAGAAG+TGG | + | chr1.4:3337743-3337762 | None:intergenic | 40.0% | |
| GTCTTTCCAATATTTAGGGG+TGG | - | chr1.4:3340085-3340104 | MS.gene062767:intron | 40.0% | |
| GTTGTAGTAGAAGACTGTGA+AGG | - | chr1.4:3337748-3337767 | MS.gene062767:intron | 40.0% | |
| TATGTAGTACCAGGTGAACT+TGG | + | chr1.4:3338687-3338706 | None:intergenic | 40.0% | |
| TCTGATTCAGAGTTCACTAC+AGG | + | chr1.4:3340116-3340135 | None:intergenic | 40.0% | |
| TGGGAAGGGAAAATGAATGA+AGG | - | chr1.4:3339443-3339462 | MS.gene062767:intron | 40.0% | |
| TTAGGTATCTGAAAAGCTCC+TGG | - | chr1.4:3340228-3340247 | MS.gene062767:CDS | 40.0% | |
| TTCTTCTTCTTATCCACCGT+TGG | - | chr1.4:3337600-3337619 | MS.gene062767:intron | 40.0% | |
| ! | ACTGGATTGGAAAGATCTGA+AGG | - | chr1.4:3338609-3338628 | MS.gene062767:intron | 40.0% |
| ! | CAATAATGGGAATGGACTCA+TGG | + | chr1.4:3339628-3339647 | None:intergenic | 40.0% |
| ! | CAGGGTAAAGTTTTCGATAG+CGG | + | chr1.4:3337639-3337658 | None:intergenic | 40.0% |
| ! | GAAGGATCTAGAATGGTTGA+AGG | - | chr1.4:3338638-3338657 | MS.gene062767:intron | 40.0% |
| ! | GGTTGTAATTTGTGCAGCAT+TGG | - | chr1.4:3340419-3340438 | MS.gene062767:CDS | 40.0% |
| !! | AAGCACTTCTGAGACTGTTT+GGG | - | chr1.4:3338114-3338133 | MS.gene062767:intron | 40.0% |
| !! | CGAACGCATTGTTGATGATT+CGG | - | chr1.4:3337852-3337871 | MS.gene062767:intron | 40.0% |
| !! | TTTAATCCTGATGACGGGAA+TGG | - | chr1.4:3339244-3339263 | MS.gene062767:CDS | 40.0% |
| AACCTCAAGACTAATCCCCA+AGG | + | chr1.4:3339591-3339610 | None:intergenic | 45.0% | |
| AGAGTTCGAATCCGGATGAT+GGG | - | chr1.4:3339160-3339179 | MS.gene062767:CDS | 45.0% | |
| AGTACCAGGTGAACTTGGAT+TGG | + | chr1.4:3338682-3338701 | None:intergenic | 45.0% | |
| AGTGGTATTGTTGACGGTGT+TGG | + | chr1.4:3337725-3337744 | None:intergenic | 45.0% | |
| ATAGAAGGATACCACGTGTC+AGG | + | chr1.4:3337781-3337800 | None:intergenic | 45.0% | |
| ATTCCCAATCCAAGTTCACC+TGG | - | chr1.4:3338675-3338694 | MS.gene062767:intron | 45.0% | |
| CAAATGGGAAGGAGATGTAC+AGG | - | chr1.4:3340273-3340292 | MS.gene062767:CDS | 45.0% | |
| CATGGTTGTTGCAGTTGAGT+GGG | + | chr1.4:3337466-3337485 | None:intergenic | 45.0% | |
| CGCTATCGAAAACTTTACCC+TGG | - | chr1.4:3337637-3337656 | MS.gene062767:CDS | 45.0% | |
| GCTTGCAGAGGTAGATTACT+AGG | - | chr1.4:3340330-3340349 | MS.gene062767:CDS | 45.0% | |
| GGCTGATGAGGTTGAAATTG+CGG | + | chr1.4:3338405-3338424 | None:intergenic | 45.0% | |
| GTACCAGGTGAACTTGGATT+GGG | + | chr1.4:3338681-3338700 | None:intergenic | 45.0% | |
| GTATCTGAAAAGCTCCTGGA+AGG | - | chr1.4:3340232-3340251 | MS.gene062767:CDS | 45.0% | |
| GTGTTGAAGCGTGTTCGATT+GGG | + | chr1.4:3337517-3337536 | None:intergenic | 45.0% | |
| TAAGCATACAGGGGGAATAC+CGG | - | chr1.4:3338905-3338924 | MS.gene062767:intron | 45.0% | |
| TAGAAGGATACCACGTGTCA+GGG | + | chr1.4:3337780-3337799 | None:intergenic | 45.0% | |
| TAGAGTTCGAATCCGGATGA+TGG | - | chr1.4:3339159-3339178 | MS.gene062767:CDS | 45.0% | |
| TGAAAAGCTCCTGGAAGGTA+AGG | - | chr1.4:3340237-3340256 | MS.gene062767:CDS | 45.0% | |
| TGGCCAGGTTATTACAAAGC+AGG | - | chr1.4:3338794-3338813 | MS.gene062767:intron | 45.0% | |
| TTCCCAGGAGGAACAACATT+TGG | - | chr1.4:3338934-3338953 | MS.gene062767:intron | 45.0% | |
| TTCTCATATAACTGCTGGCC+AGG | - | chr1.4:3338779-3338798 | MS.gene062767:intron | 45.0% | |
| TTTGTCGCTGTGGAGTTTCA+TGG | + | chr1.4:3337701-3337720 | None:intergenic | 45.0% | |
| ! | AATTTGTGCAGCATTGGGGT+CGG | - | chr1.4:3340425-3340444 | MS.gene062767:CDS | 45.0% |
| !! | AGTGTTGATGATGGTGGGAA+TGG | + | chr1.4:3337493-3337512 | None:intergenic | 45.0% |
| !! | ATCCTTGGGGATTAGTCTTG+AGG | - | chr1.4:3339586-3339605 | MS.gene062767:intron | 45.0% |
| !! | CAAGCACTTCTGAGACTGTT+TGG | - | chr1.4:3338113-3338132 | MS.gene062767:intron | 45.0% |
| !! | CGATTGGGAAGTGTTGATGA+TGG | + | chr1.4:3337502-3337521 | None:intergenic | 45.0% |
| !! | TGAGATTCGGATGATGGGAA+TGG | - | chr1.4:3339199-3339218 | MS.gene062767:CDS | 45.0% |
| !! | TGGGAAGTGTTGATGATGGT+GGG | + | chr1.4:3337498-3337517 | None:intergenic | 45.0% |
| !! | TTGGGAAGTGTTGATGATGG+TGG | + | chr1.4:3337499-3337518 | None:intergenic | 45.0% |
| AAGCATACAGGGGGAATACC+GGG | - | chr1.4:3338906-3338925 | MS.gene062767:intron | 50.0% | |
| AAGGACAAATCCCTGACACG+TGG | - | chr1.4:3337767-3337786 | MS.gene062767:intron | 50.0% | |
| AGGAGCTGGAGTTCTGCAAA+TGG | - | chr1.4:3340257-3340276 | MS.gene062767:CDS | 50.0% | |
| ATTAGTCGCCCACCATTGGT+GGG | - | chr1.4:3338987-3339006 | MS.gene062767:intron | 50.0% | |
| CCACTCAACTGCAACAACCA+TGG | - | chr1.4:3337464-3337483 | MS.gene062767:CDS | 50.0% | |
| CCATGGTTGTTGCAGTTGAG+TGG | + | chr1.4:3337467-3337486 | None:intergenic | 50.0% | |
| CCTCATCAGCCGCAATACAA+AGG | - | chr1.4:3338414-3338433 | MS.gene062767:intron | 50.0% | |
| CCTCATCTCTTCGGTGATTC+CGG | + | chr1.4:3337671-3337690 | None:intergenic | 50.0% | |
| CCTTTGTATTGCGGCTGATG+AGG | + | chr1.4:3338417-3338436 | None:intergenic | 50.0% | |
| CTGGAGTTCTGCAAATGGGA+AGG | - | chr1.4:3340262-3340281 | MS.gene062767:CDS | 50.0% | |
| CTTTACCCTGGTGAAACCAC+CGG | - | chr1.4:3337649-3337668 | MS.gene062767:CDS | 50.0% | |
| GAAGCTTAACGTGCTTGCAG+AGG | - | chr1.4:3340318-3340337 | MS.gene062767:CDS | 50.0% | |
| GCATCTCCATTCCCATCATC+CGG | + | chr1.4:3339174-3339193 | None:intergenic | 50.0% | |
| GGAGCTGGAGTTCTGCAAAT+GGG | - | chr1.4:3340258-3340277 | MS.gene062767:CDS | 50.0% | |
| GGCAACGAACCTCATCTCTT+CGG | + | chr1.4:3337680-3337699 | None:intergenic | 50.0% | |
| GGCCAAATGTTGTTCCTCCT+GGG | + | chr1.4:3338939-3338958 | None:intergenic | 50.0% | |
| GGCTGTGAGCCTTTGTATTG+CGG | + | chr1.4:3338426-3338445 | None:intergenic | 50.0% | |
| TGATTCCGGTGGTTTCACCA+GGG | + | chr1.4:3337657-3337676 | None:intergenic | 50.0% | |
| TGGCCAAATGTTGTTCCTCC+TGG | + | chr1.4:3338940-3338959 | None:intergenic | 50.0% | |
| ! | ATTTGTGCAGCATTGGGGTC+GGG | - | chr1.4:3340426-3340445 | MS.gene062767:CDS | 50.0% |
| ! | GGGGAGCTTTTATGGTTCAC+TGG | - | chr1.4:3338862-3338881 | MS.gene062767:intron | 50.0% |
| ! | GGTGTTGAAGCGTGTTCGAT+TGG | + | chr1.4:3337518-3337537 | None:intergenic | 50.0% |
| !! | AGTCTCAGAAGTGCTTGCGT+CGG | + | chr1.4:3338110-3338129 | None:intergenic | 50.0% |
| !! | GATGGTGGGAATGGTAACCA+TGG | + | chr1.4:3337484-3337503 | None:intergenic | 50.0% |
| !! | TCGAATCCGGATGATGGGAA+TGG | - | chr1.4:3339165-3339184 | MS.gene062767:CDS | 50.0% |
| ACTCCAGCTCCTTACCTTCC+AGG | + | chr1.4:3340249-3340268 | None:intergenic | 55.0% | |
| CATCTCTTCGGTGATTCCGG+TGG | + | chr1.4:3337668-3337687 | None:intergenic | 55.0% | |
| CCGGAATCACCGAAGAGATG+AGG | - | chr1.4:3337668-3337687 | MS.gene062767:CDS | 55.0% | |
| CTAATCCGGCTCATGCGTAG+AGG | + | chr1.4:3338972-3338991 | None:intergenic | 55.0% | |
| GAATACCGGGTTCGATTCCC+AGG | - | chr1.4:3338919-3338938 | MS.gene062767:intron | 55.0% | |
| GCATCTCCATTCCCGTCATC+AGG | + | chr1.4:3339253-3339272 | None:intergenic | 55.0% | |
| GTGATTCCGGTGGTTTCACC+AGG | + | chr1.4:3337658-3337677 | None:intergenic | 55.0% | |
| GTTTCCGACCCACCAATGGT+GGG | + | chr1.4:3338998-3339017 | None:intergenic | 55.0% | |
| TTCCTCCTGGGAATCGAACC+CGG | + | chr1.4:3338927-3338946 | None:intergenic | 55.0% | |
| ! | ACCATTGGTGGGTCGGAAAC+CGG | - | chr1.4:3338998-3339017 | MS.gene062767:intron | 55.0% |
| ! | GATTAGTCGCCCACCATTGG+TGG | - | chr1.4:3338986-3339005 | MS.gene062767:intron | 55.0% |
| !! | CCAATGGTGGGCGACTAATC+CGG | + | chr1.4:3338986-3339005 | None:intergenic | 55.0% |
| !!! | CGGTGTTGGTTTTGTCGCTG+TGG | + | chr1.4:3337711-3337730 | None:intergenic | 55.0% |
| GCATGCCTCTACGCATGAGC+CGG | - | chr1.4:3338964-3338983 | MS.gene062767:intron | 60.0% | |
| GCTCCTGGAAGGTAAGGAGC+TGG | - | chr1.4:3340243-3340262 | MS.gene062767:CDS | 60.0% | |
| GGTTTCCGACCCACCAATGG+TGG | + | chr1.4:3338999-3339018 | None:intergenic | 60.0% | |
| TACCGGGTTCGATTCCCAGG+AGG | - | chr1.4:3338922-3338941 | MS.gene062767:intron | 60.0% | |
| ! | ACCGGTTTCCGACCCACCAA+TGG | + | chr1.4:3339002-3339021 | None:intergenic | 60.0% |
| ! | ATGCGTAGAGGCATGCGCAC+TGG | + | chr1.4:3338960-3338979 | None:intergenic | 60.0% |
| !! | CCGGATTAGTCGCCCACCAT+TGG | - | chr1.4:3338983-3339002 | MS.gene062767:intron | 60.0% |
| ! | GTCGCCCACCATTGGTGGGT+CGG | - | chr1.4:3338991-3339010 | MS.gene062767:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 3337445 | 3340528 | 3337445 | ID=MS.gene062767 |
| chr1.4 | mRNA | 3337445 | 3340528 | 3337445 | ID=MS.gene062767.t1;Parent=MS.gene062767 |
| chr1.4 | exon | 3340087 | 3340528 | 3340087 | ID=MS.gene062767.t1.exon1;Parent=MS.gene062767.t1 |
| chr1.4 | CDS | 3340087 | 3340528 | 3340087 | ID=cds.MS.gene062767.t1;Parent=MS.gene062767.t1 |
| chr1.4 | exon | 3339158 | 3339381 | 3339158 | ID=MS.gene062767.t1.exon2;Parent=MS.gene062767.t1 |
| chr1.4 | CDS | 3339158 | 3339381 | 3339158 | ID=cds.MS.gene062767.t1;Parent=MS.gene062767.t1 |
| chr1.4 | exon | 3337634 | 3337741 | 3337634 | ID=MS.gene062767.t1.exon3;Parent=MS.gene062767.t1 |
| chr1.4 | CDS | 3337634 | 3337741 | 3337634 | ID=cds.MS.gene062767.t1;Parent=MS.gene062767.t1 |
| chr1.4 | exon | 3337445 | 3337537 | 3337445 | ID=MS.gene062767.t1.exon4;Parent=MS.gene062767.t1 |
| chr1.4 | CDS | 3337445 | 3337537 | 3337445 | ID=cds.MS.gene062767.t1;Parent=MS.gene062767.t1 |
| Gene Sequence |
| Protein sequence |
