Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065510.t1 | XP_003617547.2 | 99.4 | 166 | 1 | 0 | 1 | 166 | 375 | 540 | 1.50E-85 | 325.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065510.t1 | O49717 | 82.6 | 167 | 27 | 1 | 1 | 165 | 384 | 550 | 8.4e-74 | 277.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065510.t1 | G7K8K5 | 99.4 | 166 | 1 | 0 | 1 | 166 | 375 | 540 | 1.1e-85 | 325.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049182 | MS.gene065510 | 0.810657 | 1.03E-50 | -1.69E-46 |
| MS.gene04918 | MS.gene065510 | 0.84214 | 3.10E-58 | -1.69E-46 |
| MS.gene049197 | MS.gene065510 | 0.823843 | 1.11E-53 | -1.69E-46 |
| MS.gene04919 | MS.gene065510 | 0.848637 | 5.40E-60 | -1.69E-46 |
| MS.gene04920 | MS.gene065510 | 0.85723 | 1.88E-62 | -1.69E-46 |
| MS.gene049283 | MS.gene065510 | 0.823435 | 1.39E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene065510 | 0.831012 | 2.12E-55 | -1.69E-46 |
| MS.gene049983 | MS.gene065510 | 0.804999 | 1.65E-49 | -1.69E-46 |
| MS.gene050238 | MS.gene065510 | 0.805727 | 1.16E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene065510 | 0.820871 | 5.45E-53 | -1.69E-46 |
| MS.gene050961 | MS.gene065510 | 0.809673 | 1.68E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene065510 | 0.801757 | 7.74E-49 | -1.69E-46 |
| MS.gene051538 | MS.gene065510 | 0.802193 | 6.30E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene065510 | 0.80918 | 2.15E-50 | -1.69E-46 |
| MS.gene051959 | MS.gene065510 | 0.833689 | 4.62E-56 | -1.69E-46 |
| MS.gene051960 | MS.gene065510 | 0.840522 | 8.27E-58 | -1.69E-46 |
| MS.gene052016 | MS.gene065510 | 0.820779 | 5.73E-53 | -1.69E-46 |
| MS.gene052040 | MS.gene065510 | 0.800626 | 1.32E-48 | -1.69E-46 |
| MS.gene052118 | MS.gene065510 | 0.805765 | 1.14E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene065510 | 0.831886 | 1.29E-55 | -1.69E-46 |
| MS.gene052570 | MS.gene065510 | 0.836294 | 1.02E-56 | -1.69E-46 |
| MS.gene053272 | MS.gene065510 | -0.810582 | 1.07E-50 | -1.69E-46 |
| MS.gene053495 | MS.gene065510 | -0.823366 | 1.44E-53 | -1.69E-46 |
| MS.gene054142 | MS.gene065510 | 0.805448 | 1.33E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene065510 | 0.805605 | 1.23E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene065510 | 0.847235 | 1.31E-59 | -1.69E-46 |
| MS.gene054893 | MS.gene065510 | 0.848385 | 6.34E-60 | -1.69E-46 |
| MS.gene054957 | MS.gene065510 | 0.80168 | 8.03E-49 | -1.69E-46 |
| MS.gene055150 | MS.gene065510 | 0.82627 | 2.97E-54 | -1.69E-46 |
| MS.gene055229 | MS.gene065510 | 0.818766 | 1.65E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene065510 | 0.802058 | 6.72E-49 | -1.69E-46 |
| MS.gene05624 | MS.gene065510 | 0.82475 | 6.82E-54 | -1.69E-46 |
| MS.gene056699 | MS.gene065510 | 0.817669 | 2.92E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene065510 | 0.841397 | 4.87E-58 | -1.69E-46 |
| MS.gene057102 | MS.gene065510 | 0.844493 | 7.31E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene065510 | -0.83569 | 1.45E-56 | -1.69E-46 |
| MS.gene057174 | MS.gene065510 | 0.82704 | 1.95E-54 | -1.69E-46 |
| MS.gene058095 | MS.gene065510 | 0.836883 | 7.21E-57 | -1.69E-46 |
| MS.gene058592 | MS.gene065510 | 0.812816 | 3.51E-51 | -1.69E-46 |
| MS.gene058781 | MS.gene065510 | 0.802428 | 5.64E-49 | -1.69E-46 |
| MS.gene05878 | MS.gene065510 | 0.81864 | 1.76E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene065510 | 0.839638 | 1.41E-57 | -1.69E-46 |
| MS.gene05956 | MS.gene065510 | 0.80328 | 3.76E-49 | -1.69E-46 |
| MS.gene059634 | MS.gene065510 | 0.81042 | 1.16E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene065510 | 0.815658 | 8.26E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene065510 | -0.861476 | 9.99E-64 | -1.69E-46 |
| MS.gene059901 | MS.gene065510 | -0.834282 | 3.28E-56 | -1.69E-46 |
| MS.gene06023 | MS.gene065510 | 0.819133 | 1.36E-52 | -1.69E-46 |
| MS.gene060338 | MS.gene065510 | 0.826275 | 2.97E-54 | -1.69E-46 |
| MS.gene060512 | MS.gene065510 | 0.827613 | 1.42E-54 | -1.69E-46 |
| MS.gene060522 | MS.gene065510 | 0.872964 | 2.12E-67 | -1.69E-46 |
| MS.gene060906 | MS.gene065510 | 0.832148 | 1.12E-55 | -1.69E-46 |
| MS.gene060933 | MS.gene065510 | 0.811588 | 6.50E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene065510 | 0.810036 | 1.41E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene065510 | 0.822932 | 1.82E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene065510 | 0.830699 | 2.54E-55 | -1.69E-46 |
| MS.gene061160 | MS.gene065510 | 0.800658 | 1.30E-48 | -1.69E-46 |
| MS.gene061188 | MS.gene065510 | 0.835813 | 1.35E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065510.t1 | MTR_5g092810 | 99.398 | 166 | 1 | 0 | 1 | 166 | 375 | 540 | 2.72e-117 | 342 |
| MS.gene065510.t1 | MTR_3g051770 | 85.549 | 173 | 18 | 1 | 1 | 166 | 366 | 538 | 1.49e-101 | 302 |
| MS.gene065510.t1 | MTR_4g132070 | 83.133 | 166 | 28 | 0 | 1 | 166 | 374 | 539 | 1.31e-99 | 297 |
| MS.gene065510.t1 | MTR_8g099095 | 76.582 | 158 | 37 | 0 | 1 | 158 | 349 | 506 | 7.96e-85 | 258 |
| MS.gene065510.t1 | MTR_5g009830 | 75.949 | 158 | 38 | 0 | 1 | 158 | 349 | 506 | 3.39e-84 | 256 |
| MS.gene065510.t1 | MTR_1g026190 | 74.684 | 158 | 40 | 0 | 1 | 158 | 365 | 522 | 1.86e-82 | 253 |
| MS.gene065510.t1 | MTR_4g132040 | 67.470 | 166 | 53 | 1 | 1 | 166 | 379 | 543 | 1.70e-77 | 240 |
| MS.gene065510.t1 | MTR_0028s0170 | 68.354 | 158 | 50 | 0 | 1 | 158 | 361 | 518 | 8.23e-71 | 223 |
| MS.gene065510.t1 | MTR_5g089320 | 68.354 | 158 | 50 | 0 | 1 | 158 | 351 | 508 | 3.14e-70 | 221 |
| MS.gene065510.t1 | MTR_5g099240 | 63.924 | 158 | 56 | 1 | 1 | 158 | 307 | 463 | 6.33e-63 | 201 |
| MS.gene065510.t1 | MTR_5g099240 | 63.924 | 158 | 56 | 1 | 1 | 158 | 379 | 535 | 2.49e-62 | 201 |
| MS.gene065510.t1 | MTR_1g055255 | 59.146 | 164 | 66 | 1 | 1 | 164 | 407 | 569 | 1.48e-61 | 199 |
| MS.gene065510.t1 | MTR_1g096490 | 60.127 | 158 | 62 | 1 | 1 | 158 | 313 | 469 | 3.38e-61 | 197 |
| MS.gene065510.t1 | MTR_3g098070 | 60.127 | 158 | 62 | 1 | 1 | 158 | 312 | 468 | 2.76e-60 | 194 |
| MS.gene065510.t1 | MTR_8g095440 | 60.759 | 158 | 61 | 1 | 1 | 158 | 313 | 469 | 5.20e-60 | 194 |
| MS.gene065510.t1 | MTR_3g098090 | 58.861 | 158 | 64 | 1 | 1 | 158 | 315 | 471 | 6.71e-59 | 191 |
| MS.gene065510.t1 | MTR_1g041150 | 58.861 | 158 | 64 | 1 | 1 | 158 | 401 | 557 | 8.81e-59 | 192 |
| MS.gene065510.t1 | MTR_4g107490 | 57.862 | 159 | 66 | 1 | 1 | 158 | 356 | 514 | 2.14e-58 | 191 |
| MS.gene065510.t1 | MTR_1g054865 | 57.692 | 156 | 65 | 1 | 1 | 156 | 444 | 598 | 1.27e-57 | 189 |
| MS.gene065510.t1 | MTR_7g106710 | 54.430 | 158 | 71 | 1 | 1 | 158 | 418 | 574 | 2.32e-55 | 183 |
| MS.gene065510.t1 | MTR_1g052530 | 50.314 | 159 | 78 | 1 | 1 | 158 | 335 | 493 | 3.35e-48 | 163 |
| MS.gene065510.t1 | MTR_7g106710 | 54.225 | 142 | 64 | 1 | 1 | 142 | 418 | 558 | 5.59e-48 | 163 |
| MS.gene065510.t1 | MTR_4g066660 | 46.835 | 158 | 84 | 0 | 1 | 158 | 355 | 512 | 6.53e-48 | 163 |
| MS.gene065510.t1 | MTR_7g068710 | 48.428 | 159 | 81 | 1 | 1 | 158 | 339 | 497 | 8.85e-47 | 159 |
| MS.gene065510.t1 | MTR_7g091890 | 47.170 | 159 | 83 | 1 | 1 | 158 | 341 | 499 | 1.52e-43 | 151 |
| MS.gene065510.t1 | MTR_5g089440 | 52.027 | 148 | 36 | 1 | 11 | 158 | 67 | 179 | 3.18e-42 | 139 |
| MS.gene065510.t1 | MTR_5g088320 | 40.816 | 147 | 83 | 3 | 12 | 155 | 1 | 146 | 4.56e-29 | 104 |
| MS.gene065510.t1 | MTR_6g025320 | 40.136 | 147 | 84 | 3 | 12 | 155 | 1 | 146 | 1.60e-28 | 103 |
| MS.gene065510.t1 | MTR_7g087610 | 39.456 | 147 | 85 | 3 | 12 | 155 | 1 | 146 | 2.66e-28 | 102 |
| MS.gene065510.t1 | MTR_5g009830 | 76.119 | 67 | 16 | 0 | 1 | 67 | 349 | 415 | 3.00e-27 | 105 |
| MS.gene065510.t1 | MTR_1g041285 | 37.584 | 149 | 89 | 3 | 12 | 157 | 1 | 148 | 7.63e-27 | 99.0 |
| MS.gene065510.t1 | MTR_1g076650 | 36.735 | 147 | 89 | 3 | 12 | 155 | 1 | 146 | 1.75e-24 | 93.2 |
| MS.gene065510.t1 | MTR_5g022030 | 34.756 | 164 | 95 | 3 | 2 | 158 | 385 | 543 | 2.62e-24 | 98.6 |
| MS.gene065510.t1 | MTR_0168s0120 | 42.342 | 111 | 60 | 3 | 48 | 155 | 1 | 110 | 5.27e-22 | 85.5 |
| MS.gene065510.t1 | MTR_6g025320 | 42.342 | 111 | 60 | 3 | 48 | 155 | 1 | 110 | 5.27e-22 | 85.5 |
| MS.gene065510.t1 | MTR_7g074020 | 38.255 | 149 | 82 | 4 | 15 | 157 | 22 | 166 | 1.31e-21 | 86.3 |
| MS.gene065510.t1 | MTR_8g095440 | 62.319 | 69 | 26 | 0 | 1 | 69 | 313 | 381 | 2.82e-21 | 89.4 |
| MS.gene065510.t1 | MTR_4g112460 | 34.965 | 143 | 85 | 3 | 19 | 155 | 7 | 147 | 9.76e-21 | 84.0 |
| MS.gene065510.t1 | MTR_1g071150 | 32.192 | 146 | 96 | 2 | 12 | 155 | 1 | 145 | 1.74e-20 | 82.8 |
| MS.gene065510.t1 | MTR_4g067270 | 36.170 | 141 | 82 | 4 | 24 | 158 | 6 | 144 | 2.39e-20 | 82.4 |
| MS.gene065510.t1 | MTR_6g007613 | 38.255 | 149 | 78 | 5 | 15 | 155 | 21 | 163 | 1.21e-19 | 81.3 |
| MS.gene065510.t1 | MTR_5g022030 | 37.705 | 122 | 69 | 2 | 2 | 116 | 385 | 506 | 1.76e-19 | 84.7 |
| MS.gene065510.t1 | MTR_7g106710 | 55.072 | 69 | 31 | 0 | 1 | 69 | 418 | 486 | 3.03e-19 | 84.0 |
| MS.gene065510.t1 | MTR_5g079340 | 36.296 | 135 | 81 | 3 | 24 | 155 | 5 | 137 | 1.16e-18 | 77.8 |
| MS.gene065510.t1 | MTR_1g046950 | 35.461 | 141 | 77 | 4 | 24 | 155 | 5 | 140 | 3.72e-18 | 76.6 |
| MS.gene065510.t1 | MTR_3g067610 | 36.765 | 136 | 76 | 4 | 24 | 155 | 6 | 135 | 4.71e-18 | 76.3 |
| MS.gene065510.t1 | MTR_8g066630 | 30.872 | 149 | 98 | 2 | 16 | 159 | 10 | 158 | 5.79e-18 | 76.6 |
| MS.gene065510.t1 | MTR_8g069915 | 33.793 | 145 | 88 | 3 | 17 | 155 | 6 | 148 | 1.04e-17 | 76.3 |
| MS.gene065510.t1 | MTR_7g089760 | 34.286 | 140 | 86 | 3 | 24 | 158 | 6 | 144 | 2.28e-17 | 74.7 |
| MS.gene065510.t1 | MTR_8g107110 | 34.815 | 135 | 87 | 1 | 24 | 157 | 25 | 159 | 4.18e-17 | 74.3 |
| MS.gene065510.t1 | MTR_6g079570 | 33.813 | 139 | 90 | 2 | 24 | 160 | 27 | 165 | 1.34e-16 | 73.2 |
| MS.gene065510.t1 | MTR_7g074020 | 37.313 | 134 | 74 | 4 | 15 | 142 | 22 | 151 | 1.46e-16 | 72.8 |
| MS.gene065510.t1 | MTR_2g098890 | 33.333 | 141 | 88 | 2 | 24 | 158 | 65 | 205 | 2.04e-16 | 73.6 |
| MS.gene065510.t1 | MTR_8g105230 | 35.075 | 134 | 77 | 4 | 24 | 151 | 37 | 166 | 3.82e-16 | 72.4 |
| MS.gene065510.t1 | MTR_5g011850 | 31.507 | 146 | 96 | 3 | 12 | 155 | 1 | 144 | 8.66e-16 | 70.5 |
| MS.gene065510.t1 | MTR_4g115170 | 30.323 | 155 | 88 | 2 | 24 | 158 | 65 | 219 | 1.93e-15 | 71.2 |
| MS.gene065510.t1 | MTR_3g088655 | 33.784 | 148 | 80 | 4 | 24 | 155 | 9 | 154 | 2.19e-15 | 69.7 |
| MS.gene065510.t1 | MTR_1g052530 | 50.725 | 69 | 34 | 0 | 1 | 69 | 335 | 403 | 2.45e-15 | 72.8 |
| MS.gene065510.t1 | MTR_3g055570 | 30.464 | 151 | 90 | 2 | 9 | 158 | 38 | 174 | 3.10e-15 | 69.7 |
| MS.gene065510.t1 | MTR_4g103650 | 32.576 | 132 | 84 | 2 | 27 | 155 | 6 | 135 | 6.34e-15 | 67.8 |
| MS.gene065510.t1 | MTR_1g032070 | 36.029 | 136 | 81 | 3 | 24 | 155 | 47 | 180 | 7.60e-15 | 69.3 |
| MS.gene065510.t1 | MTR_7g075040 | 33.333 | 147 | 85 | 4 | 24 | 158 | 48 | 193 | 9.47e-15 | 68.9 |
| MS.gene065510.t1 | MTR_6g007613 | 38.400 | 125 | 66 | 4 | 15 | 134 | 21 | 139 | 1.14e-14 | 67.8 |
| MS.gene065510.t1 | MTR_1g047100 | 33.813 | 139 | 85 | 3 | 24 | 157 | 5 | 141 | 1.17e-14 | 67.4 |
| MS.gene065510.t1 | MTR_4g103655 | 31.818 | 132 | 85 | 2 | 27 | 155 | 10 | 139 | 1.74e-14 | 67.0 |
| MS.gene065510.t1 | MTR_7g091890 | 47.561 | 82 | 43 | 0 | 1 | 82 | 341 | 422 | 1.82e-14 | 70.1 |
| MS.gene065510.t1 | MTR_7g115040 | 32.653 | 147 | 95 | 3 | 12 | 155 | 1 | 146 | 3.41e-14 | 66.2 |
| MS.gene065510.t1 | MTR_5g017550 | 30.147 | 136 | 94 | 1 | 24 | 158 | 49 | 184 | 3.97e-14 | 67.0 |
| MS.gene065510.t1 | MTR_4g086260 | 32.331 | 133 | 88 | 2 | 24 | 155 | 58 | 189 | 4.69e-14 | 67.0 |
| MS.gene065510.t1 | MTR_3g089070 | 29.630 | 135 | 94 | 1 | 23 | 156 | 6 | 140 | 5.77e-14 | 65.5 |
| MS.gene065510.t1 | MTR_1g030440 | 31.056 | 161 | 89 | 5 | 15 | 161 | 14 | 166 | 5.86e-14 | 66.2 |
| MS.gene065510.t1 | MTR_4g009290 | 44.615 | 65 | 36 | 0 | 93 | 157 | 145 | 209 | 6.36e-14 | 67.4 |
| MS.gene065510.t1 | MTR_3g089090 | 29.630 | 135 | 94 | 1 | 23 | 156 | 5 | 139 | 6.47e-14 | 65.5 |
| MS.gene065510.t1 | MTR_7g074240 | 27.703 | 148 | 93 | 2 | 24 | 157 | 25 | 172 | 3.04e-13 | 64.7 |
| MS.gene065510.t1 | MTR_8g079790 | 25.294 | 170 | 115 | 4 | 2 | 162 | 415 | 581 | 8.40e-13 | 65.5 |
| MS.gene065510.t1 | MTR_6g023460 | 29.231 | 130 | 91 | 1 | 27 | 155 | 12 | 141 | 8.95e-13 | 62.4 |
| MS.gene065510.t1 | MTR_5g008705 | 31.452 | 124 | 81 | 3 | 31 | 151 | 2 | 124 | 1.26e-12 | 61.6 |
| MS.gene065510.t1 | MTR_4g103630 | 30.303 | 132 | 87 | 2 | 27 | 155 | 10 | 139 | 1.91e-12 | 61.6 |
| MS.gene065510.t1 | MTR_3g055520 | 27.451 | 153 | 96 | 2 | 9 | 160 | 38 | 176 | 2.69e-12 | 62.0 |
| MS.gene065510.t1 | MTR_5g017510 | 29.927 | 137 | 94 | 2 | 24 | 158 | 49 | 185 | 3.06e-12 | 62.0 |
| MS.gene065510.t1 | MTR_5g017560 | 29.927 | 137 | 94 | 2 | 24 | 158 | 49 | 185 | 3.06e-12 | 62.0 |
| MS.gene065510.t1 | MTR_8g070510 | 26.452 | 155 | 92 | 2 | 19 | 151 | 54 | 208 | 4.13e-12 | 62.4 |
| MS.gene065510.t1 | MTR_8g096050 | 29.457 | 129 | 85 | 2 | 24 | 151 | 56 | 179 | 4.44e-12 | 63.5 |
| MS.gene065510.t1 | MTR_8g070510 | 26.452 | 155 | 92 | 2 | 19 | 151 | 50 | 204 | 4.45e-12 | 62.0 |
| MS.gene065510.t1 | MTR_3g098460 | 29.655 | 145 | 95 | 3 | 8 | 151 | 19 | 157 | 5.37e-12 | 63.2 |
| MS.gene065510.t1 | MTR_7g090450 | 31.206 | 141 | 86 | 4 | 24 | 155 | 74 | 212 | 9.42e-12 | 61.2 |
| MS.gene065510.t1 | MTR_8g036075 | 29.412 | 153 | 98 | 4 | 18 | 160 | 44 | 196 | 1.04e-11 | 60.8 |
| MS.gene065510.t1 | MTR_8g078270 | 26.623 | 154 | 107 | 3 | 6 | 155 | 36 | 187 | 7.96e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065510.t1 | AT4G21940 | 82.143 | 168 | 28 | 1 | 1 | 166 | 384 | 551 | 7.49e-98 | 293 |
| MS.gene065510.t1 | AT4G21940 | 82.143 | 168 | 28 | 1 | 1 | 166 | 384 | 551 | 8.72e-98 | 293 |
| MS.gene065510.t1 | AT4G04720 | 80.838 | 167 | 31 | 1 | 1 | 166 | 362 | 528 | 2.26e-95 | 286 |
| MS.gene065510.t1 | AT4G04720 | 80.838 | 167 | 31 | 1 | 1 | 166 | 362 | 528 | 2.26e-95 | 286 |
| MS.gene065510.t1 | AT3G20410 | 79.167 | 168 | 33 | 1 | 1 | 166 | 374 | 541 | 2.15e-93 | 281 |
| MS.gene065510.t1 | AT3G20410 | 79.167 | 168 | 33 | 1 | 1 | 166 | 374 | 541 | 2.15e-93 | 281 |
| MS.gene065510.t1 | AT1G50700 | 78.313 | 166 | 36 | 0 | 1 | 166 | 356 | 521 | 4.34e-93 | 280 |
| MS.gene065510.t1 | AT4G04710 | 77.711 | 166 | 36 | 1 | 1 | 165 | 301 | 466 | 1.11e-89 | 270 |
| MS.gene065510.t1 | AT4G04710 | 77.711 | 166 | 36 | 1 | 1 | 165 | 315 | 480 | 1.53e-89 | 270 |
| MS.gene065510.t1 | AT4G04710 | 77.711 | 166 | 36 | 1 | 1 | 165 | 328 | 493 | 2.17e-89 | 270 |
| MS.gene065510.t1 | AT4G04710 | 76.786 | 168 | 36 | 2 | 1 | 165 | 328 | 495 | 1.73e-87 | 265 |
| MS.gene065510.t1 | AT1G50700 | 67.708 | 192 | 36 | 1 | 1 | 166 | 356 | 547 | 4.33e-87 | 265 |
| MS.gene065510.t1 | AT1G76040 | 77.215 | 158 | 36 | 0 | 1 | 158 | 156 | 313 | 2.33e-86 | 256 |
| MS.gene065510.t1 | AT1G76040 | 77.215 | 158 | 36 | 0 | 1 | 158 | 156 | 313 | 2.33e-86 | 256 |
| MS.gene065510.t1 | AT1G76040 | 77.215 | 158 | 36 | 0 | 1 | 158 | 394 | 551 | 1.69e-83 | 256 |
| MS.gene065510.t1 | AT1G61950 | 72.892 | 166 | 44 | 1 | 1 | 165 | 382 | 547 | 5.59e-83 | 254 |
| MS.gene065510.t1 | AT4G04695 | 72.024 | 168 | 45 | 1 | 1 | 166 | 314 | 481 | 3.29e-81 | 248 |
| MS.gene065510.t1 | AT4G04740 | 70.060 | 167 | 49 | 1 | 1 | 166 | 351 | 517 | 1.32e-77 | 240 |
| MS.gene065510.t1 | AT4G04740 | 70.060 | 167 | 49 | 1 | 1 | 166 | 351 | 517 | 1.32e-77 | 240 |
| MS.gene065510.t1 | AT4G04740 | 70.060 | 167 | 49 | 1 | 1 | 166 | 351 | 517 | 1.32e-77 | 240 |
| MS.gene065510.t1 | AT4G04740 | 70.060 | 167 | 49 | 1 | 1 | 166 | 351 | 517 | 1.32e-77 | 240 |
| MS.gene065510.t1 | AT4G04740 | 70.060 | 167 | 49 | 1 | 1 | 166 | 351 | 517 | 1.32e-77 | 240 |
| MS.gene065510.t1 | AT4G04740 | 70.060 | 167 | 49 | 1 | 1 | 166 | 351 | 517 | 1.32e-77 | 240 |
| MS.gene065510.t1 | AT4G23650 | 69.620 | 158 | 48 | 0 | 1 | 158 | 361 | 518 | 1.27e-76 | 238 |
| MS.gene065510.t1 | AT4G04700 | 67.665 | 167 | 52 | 1 | 2 | 166 | 315 | 481 | 1.02e-74 | 231 |
| MS.gene065510.t1 | AT5G19360 | 70.253 | 158 | 47 | 0 | 1 | 158 | 351 | 508 | 1.09e-72 | 227 |
| MS.gene065510.t1 | AT5G12180 | 69.620 | 158 | 48 | 0 | 1 | 158 | 356 | 513 | 9.27e-72 | 225 |
| MS.gene065510.t1 | AT4G04740 | 72.535 | 142 | 39 | 0 | 1 | 142 | 351 | 492 | 8.35e-68 | 215 |
| MS.gene065510.t1 | AT2G17290 | 64.024 | 164 | 58 | 1 | 1 | 164 | 368 | 530 | 2.18e-65 | 209 |
| MS.gene065510.t1 | AT2G17290 | 64.024 | 164 | 58 | 1 | 1 | 164 | 368 | 530 | 2.18e-65 | 209 |
| MS.gene065510.t1 | AT4G38230 | 62.264 | 159 | 59 | 1 | 1 | 159 | 163 | 320 | 1.36e-64 | 201 |
| MS.gene065510.t1 | AT4G38230 | 62.264 | 159 | 59 | 1 | 1 | 159 | 307 | 464 | 1.07e-62 | 200 |
| MS.gene065510.t1 | AT4G38230 | 62.264 | 159 | 59 | 1 | 1 | 159 | 307 | 464 | 1.07e-62 | 200 |
| MS.gene065510.t1 | AT4G38230 | 62.264 | 159 | 59 | 1 | 1 | 159 | 337 | 494 | 2.03e-62 | 200 |
| MS.gene065510.t1 | AT4G21940 | 85.321 | 109 | 16 | 0 | 1 | 109 | 384 | 492 | 1.05e-61 | 198 |
| MS.gene065510.t1 | AT4G35310 | 60.976 | 164 | 63 | 1 | 1 | 164 | 380 | 542 | 1.69e-61 | 199 |
| MS.gene065510.t1 | AT4G35310 | 60.976 | 164 | 63 | 1 | 1 | 164 | 380 | 542 | 1.69e-61 | 199 |
| MS.gene065510.t1 | AT5G04870 | 58.182 | 165 | 68 | 1 | 1 | 165 | 433 | 596 | 4.83e-61 | 199 |
| MS.gene065510.t1 | AT1G35670 | 58.228 | 158 | 65 | 1 | 1 | 158 | 309 | 465 | 6.73e-61 | 196 |
| MS.gene065510.t1 | AT4G09570 | 57.595 | 158 | 66 | 1 | 1 | 158 | 308 | 464 | 6.36e-59 | 191 |
| MS.gene065510.t1 | AT1G50700 | 81.651 | 109 | 20 | 0 | 1 | 109 | 356 | 464 | 1.28e-58 | 189 |
| MS.gene065510.t1 | AT3G10660 | 59.494 | 158 | 63 | 1 | 1 | 158 | 469 | 625 | 1.31e-57 | 190 |
| MS.gene065510.t1 | AT3G10660 | 59.494 | 158 | 63 | 1 | 1 | 158 | 469 | 625 | 1.31e-57 | 190 |
| MS.gene065510.t1 | AT5G23580 | 58.333 | 156 | 64 | 1 | 1 | 156 | 305 | 459 | 1.32e-57 | 187 |
| MS.gene065510.t1 | AT1G76040 | 78.378 | 111 | 24 | 0 | 1 | 111 | 394 | 504 | 2.48e-56 | 184 |
| MS.gene065510.t1 | AT2G38910 | 57.692 | 156 | 65 | 1 | 1 | 156 | 417 | 571 | 1.07e-55 | 184 |
| MS.gene065510.t1 | AT1G74740 | 52.830 | 159 | 74 | 1 | 1 | 158 | 342 | 500 | 1.31e-52 | 175 |
| MS.gene065510.t1 | AT1G18890 | 53.459 | 159 | 73 | 1 | 1 | 158 | 346 | 504 | 3.72e-51 | 171 |
| MS.gene065510.t1 | AT3G51850 | 51.875 | 160 | 74 | 2 | 1 | 158 | 337 | 495 | 1.11e-49 | 167 |
| MS.gene065510.t1 | AT5G12480 | 49.375 | 160 | 79 | 1 | 1 | 158 | 248 | 407 | 1.88e-48 | 162 |
| MS.gene065510.t1 | AT5G12480 | 49.375 | 160 | 79 | 1 | 1 | 158 | 342 | 501 | 1.31e-47 | 162 |
| MS.gene065510.t1 | AT5G19450 | 48.750 | 160 | 80 | 2 | 1 | 158 | 340 | 499 | 5.56e-46 | 157 |
| MS.gene065510.t1 | AT5G19450 | 48.750 | 160 | 80 | 2 | 1 | 158 | 340 | 499 | 5.56e-46 | 157 |
| MS.gene065510.t1 | AT2G31500 | 45.679 | 162 | 84 | 1 | 1 | 158 | 349 | 510 | 4.63e-45 | 155 |
| MS.gene065510.t1 | AT3G57530 | 47.468 | 158 | 83 | 0 | 1 | 158 | 346 | 503 | 2.56e-43 | 150 |
| MS.gene065510.t1 | AT3G51850 | 50.350 | 143 | 68 | 2 | 1 | 141 | 337 | 478 | 1.01e-40 | 143 |
| MS.gene065510.t1 | AT2G41860 | 47.170 | 159 | 83 | 1 | 1 | 158 | 337 | 495 | 3.11e-40 | 142 |
| MS.gene065510.t1 | AT2G41860 | 47.170 | 159 | 83 | 1 | 1 | 158 | 337 | 495 | 3.21e-40 | 142 |
| MS.gene065510.t1 | AT5G37780 | 40.268 | 149 | 85 | 3 | 12 | 157 | 1 | 148 | 2.78e-29 | 105 |
| MS.gene065510.t1 | AT1G66410 | 40.268 | 149 | 85 | 3 | 12 | 157 | 1 | 148 | 2.78e-29 | 105 |
| MS.gene065510.t1 | AT5G21274 | 40.136 | 147 | 84 | 3 | 12 | 155 | 1 | 146 | 8.67e-29 | 103 |
| MS.gene065510.t1 | AT3G56800 | 39.597 | 149 | 86 | 3 | 12 | 157 | 1 | 148 | 1.14e-28 | 103 |
| MS.gene065510.t1 | AT2G27030 | 39.597 | 149 | 86 | 3 | 12 | 157 | 1 | 148 | 1.14e-28 | 103 |
| MS.gene065510.t1 | AT2G41110 | 39.597 | 149 | 86 | 3 | 12 | 157 | 1 | 148 | 1.14e-28 | 103 |
| MS.gene065510.t1 | AT3G43810 | 40.136 | 147 | 84 | 3 | 12 | 155 | 1 | 146 | 1.68e-28 | 103 |
| MS.gene065510.t1 | AT2G27030 | 40.136 | 147 | 84 | 3 | 12 | 155 | 1 | 146 | 3.26e-28 | 103 |
| MS.gene065510.t1 | AT2G27030 | 43.478 | 69 | 39 | 0 | 24 | 92 | 86 | 154 | 5.09e-11 | 58.5 |
| MS.gene065510.t1 | AT3G43810 | 40.136 | 147 | 84 | 3 | 12 | 155 | 1 | 146 | 9.27e-28 | 103 |
| MS.gene065510.t1 | AT5G37780 | 36.585 | 164 | 85 | 4 | 12 | 157 | 1 | 163 | 2.75e-25 | 95.5 |
| MS.gene065510.t1 | AT2G41110 | 36.646 | 161 | 86 | 4 | 12 | 157 | 1 | 160 | 3.44e-25 | 95.1 |
| MS.gene065510.t1 | AT2G17890 | 34.146 | 164 | 96 | 3 | 2 | 158 | 394 | 552 | 1.09e-24 | 99.8 |
| MS.gene065510.t1 | AT5G37780 | 41.935 | 124 | 68 | 3 | 37 | 157 | 13 | 135 | 1.24e-24 | 93.2 |
| MS.gene065510.t1 | AT1G66410 | 37.107 | 159 | 86 | 4 | 12 | 157 | 1 | 158 | 1.37e-24 | 93.6 |
| MS.gene065510.t1 | AT5G66210 | 34.756 | 164 | 95 | 4 | 2 | 158 | 348 | 506 | 1.54e-24 | 99.0 |
| MS.gene065510.t1 | AT5G66210 | 34.756 | 164 | 95 | 4 | 2 | 158 | 348 | 506 | 1.54e-24 | 99.0 |
| MS.gene065510.t1 | AT5G37780 | 41.935 | 124 | 68 | 3 | 37 | 157 | 52 | 174 | 3.60e-24 | 93.2 |
| MS.gene065510.t1 | AT4G36070 | 33.537 | 164 | 97 | 3 | 2 | 158 | 357 | 515 | 5.25e-24 | 97.8 |
| MS.gene065510.t1 | AT4G36070 | 33.537 | 164 | 97 | 3 | 2 | 158 | 357 | 515 | 5.54e-24 | 97.8 |
| MS.gene065510.t1 | AT3G22930 | 37.762 | 143 | 85 | 3 | 16 | 155 | 28 | 169 | 1.15e-23 | 91.7 |
| MS.gene065510.t1 | AT3G50360 | 39.583 | 144 | 83 | 3 | 16 | 156 | 20 | 162 | 1.81e-23 | 90.9 |
| MS.gene065510.t1 | AT1G05990 | 37.857 | 140 | 82 | 2 | 24 | 158 | 6 | 145 | 3.74e-23 | 89.7 |
| MS.gene065510.t1 | AT4G14640 | 38.194 | 144 | 83 | 4 | 16 | 155 | 6 | 147 | 1.15e-22 | 88.6 |
| MS.gene065510.t1 | AT3G59440 | 37.143 | 140 | 81 | 3 | 24 | 158 | 52 | 189 | 2.28e-22 | 89.0 |
| MS.gene065510.t1 | AT1G66410 | 42.342 | 111 | 60 | 3 | 48 | 155 | 1 | 110 | 2.77e-22 | 86.3 |
| MS.gene065510.t1 | AT1G66410 | 42.342 | 111 | 60 | 3 | 48 | 155 | 1 | 110 | 2.77e-22 | 86.3 |
| MS.gene065510.t1 | AT2G43290 | 35.417 | 144 | 84 | 2 | 24 | 158 | 66 | 209 | 5.34e-22 | 88.6 |
| MS.gene065510.t1 | AT3G43810 | 42.342 | 111 | 60 | 3 | 48 | 155 | 1 | 110 | 5.52e-22 | 85.5 |
| MS.gene065510.t1 | AT3G43810 | 42.342 | 111 | 60 | 3 | 48 | 155 | 1 | 110 | 5.52e-22 | 85.5 |
| MS.gene065510.t1 | AT1G32250 | 32.278 | 158 | 95 | 3 | 12 | 159 | 5 | 160 | 1.76e-21 | 85.9 |
| MS.gene065510.t1 | AT4G03290 | 35.915 | 142 | 84 | 2 | 24 | 158 | 6 | 147 | 5.47e-21 | 84.3 |
| MS.gene065510.t1 | AT2G41090 | 35.762 | 151 | 92 | 3 | 12 | 160 | 1 | 148 | 5.48e-21 | 85.1 |
| MS.gene065510.t1 | AT2G41100 | 32.571 | 175 | 98 | 4 | 10 | 164 | 53 | 227 | 2.78e-20 | 85.5 |
| MS.gene065510.t1 | AT2G41100 | 32.812 | 128 | 64 | 4 | 48 | 155 | 2 | 127 | 1.51e-13 | 67.0 |
| MS.gene065510.t1 | AT2G41100 | 32.571 | 175 | 98 | 4 | 10 | 164 | 53 | 227 | 2.78e-20 | 85.5 |
| MS.gene065510.t1 | AT2G41100 | 32.812 | 128 | 64 | 4 | 48 | 155 | 2 | 127 | 1.51e-13 | 67.0 |
| MS.gene065510.t1 | AT2G41100 | 32.571 | 175 | 98 | 4 | 10 | 164 | 53 | 227 | 2.78e-20 | 85.5 |
| MS.gene065510.t1 | AT2G41100 | 32.812 | 128 | 64 | 4 | 48 | 155 | 2 | 127 | 1.51e-13 | 67.0 |
| MS.gene065510.t1 | AT5G66210 | 37.008 | 127 | 73 | 3 | 2 | 121 | 348 | 474 | 3.73e-20 | 86.7 |
| MS.gene065510.t1 | AT4G14640 | 39.837 | 123 | 68 | 4 | 37 | 155 | 9 | 129 | 4.26e-20 | 81.3 |
| MS.gene065510.t1 | AT2G41100 | 32.571 | 175 | 98 | 4 | 10 | 164 | 88 | 262 | 4.52e-20 | 85.1 |
| MS.gene065510.t1 | AT2G41100 | 31.707 | 164 | 90 | 4 | 12 | 155 | 1 | 162 | 2.99e-18 | 80.5 |
| MS.gene065510.t1 | AT2G41100 | 32.571 | 175 | 98 | 4 | 10 | 164 | 88 | 262 | 4.52e-20 | 85.1 |
| MS.gene065510.t1 | AT2G41100 | 31.707 | 164 | 90 | 4 | 12 | 155 | 1 | 162 | 2.99e-18 | 80.5 |
| MS.gene065510.t1 | AT5G66210 | 37.705 | 122 | 69 | 3 | 2 | 116 | 348 | 469 | 1.18e-19 | 85.1 |
| MS.gene065510.t1 | AT1G18530 | 34.868 | 152 | 90 | 4 | 19 | 163 | 3 | 152 | 1.20e-19 | 80.9 |
| MS.gene065510.t1 | AT3G25600 | 33.333 | 150 | 92 | 3 | 12 | 155 | 1 | 148 | 5.57e-19 | 79.3 |
| MS.gene065510.t1 | AT4G37010 | 34.722 | 144 | 90 | 3 | 16 | 156 | 20 | 162 | 3.08e-18 | 77.4 |
| MS.gene065510.t1 | AT4G37010 | 34.722 | 144 | 90 | 3 | 16 | 156 | 24 | 166 | 3.62e-18 | 77.4 |
| MS.gene065510.t1 | AT3G51850 | 46.250 | 80 | 43 | 0 | 1 | 80 | 337 | 416 | 1.59e-17 | 79.0 |
| MS.gene065510.t1 | AT2G35890 | 43.617 | 94 | 52 | 1 | 2 | 94 | 416 | 509 | 2.50e-17 | 78.6 |
| MS.gene065510.t1 | AT2G35890 | 43.617 | 94 | 52 | 1 | 2 | 94 | 416 | 509 | 2.50e-17 | 78.6 |
| MS.gene065510.t1 | AT1G73630 | 34.559 | 136 | 83 | 4 | 24 | 157 | 21 | 152 | 3.89e-17 | 74.3 |
| MS.gene065510.t1 | AT1G24620 | 34.459 | 148 | 87 | 4 | 20 | 161 | 34 | 177 | 1.30e-16 | 73.6 |
| MS.gene065510.t1 | AT3G07490 | 34.286 | 140 | 86 | 3 | 24 | 158 | 6 | 144 | 1.39e-16 | 72.8 |
| MS.gene065510.t1 | AT1G18210 | 35.075 | 134 | 81 | 4 | 24 | 155 | 24 | 153 | 2.48e-16 | 72.4 |
| MS.gene065510.t1 | AT1G18210 | 35.075 | 134 | 81 | 4 | 24 | 155 | 24 | 153 | 2.48e-16 | 72.4 |
| MS.gene065510.t1 | AT2G36180 | 29.787 | 141 | 90 | 3 | 24 | 157 | 1 | 139 | 2.55e-16 | 72.0 |
| MS.gene065510.t1 | AT4G12860 | 32.374 | 139 | 90 | 2 | 24 | 158 | 6 | 144 | 3.29e-16 | 71.6 |
| MS.gene065510.t1 | AT2G15680 | 32.639 | 144 | 93 | 3 | 16 | 157 | 43 | 184 | 3.67e-16 | 72.4 |
| MS.gene065510.t1 | AT3G51920 | 30.137 | 146 | 100 | 2 | 12 | 155 | 1 | 146 | 6.84e-16 | 70.9 |
| MS.gene065510.t1 | AT1G66400 | 32.168 | 143 | 85 | 4 | 21 | 155 | 13 | 151 | 9.13e-16 | 70.9 |
| MS.gene065510.t1 | AT5G37770 | 31.915 | 141 | 90 | 3 | 24 | 158 | 18 | 158 | 9.63e-16 | 70.9 |
| MS.gene065510.t1 | AT5G37770 | 31.915 | 141 | 90 | 3 | 24 | 158 | 18 | 158 | 9.63e-16 | 70.9 |
| MS.gene065510.t1 | AT5G17470 | 30.370 | 135 | 86 | 3 | 27 | 155 | 6 | 138 | 3.48e-15 | 68.9 |
| MS.gene065510.t1 | AT3G22930 | 36.275 | 102 | 64 | 1 | 16 | 116 | 28 | 129 | 5.27e-15 | 68.2 |
| MS.gene065510.t1 | AT3G10190 | 33.083 | 133 | 82 | 3 | 28 | 155 | 75 | 205 | 5.33e-15 | 69.7 |
| MS.gene065510.t1 | AT4G20780 | 27.717 | 184 | 105 | 4 | 2 | 159 | 6 | 187 | 6.69e-15 | 69.3 |
| MS.gene065510.t1 | AT2G41100 | 33.582 | 134 | 69 | 4 | 51 | 164 | 4 | 137 | 2.36e-14 | 67.8 |
| MS.gene065510.t1 | AT1G76650 | 31.343 | 134 | 91 | 1 | 24 | 156 | 44 | 177 | 5.08e-14 | 66.6 |
| MS.gene065510.t1 | AT1G76650 | 31.343 | 134 | 91 | 1 | 24 | 156 | 44 | 177 | 5.08e-14 | 66.6 |
| MS.gene065510.t1 | AT5G42380 | 30.935 | 139 | 93 | 2 | 21 | 156 | 47 | 185 | 1.41e-13 | 65.5 |
| MS.gene065510.t1 | AT3G57530 | 48.571 | 70 | 36 | 0 | 1 | 70 | 346 | 415 | 2.03e-13 | 67.4 |
| MS.gene065510.t1 | AT4G14640 | 36.893 | 103 | 62 | 2 | 16 | 116 | 6 | 107 | 3.35e-13 | 63.2 |
| MS.gene065510.t1 | AT3G03000 | 29.870 | 154 | 103 | 3 | 10 | 159 | 7 | 159 | 6.11e-13 | 63.5 |
| MS.gene065510.t1 | AT1G12310 | 27.778 | 144 | 100 | 3 | 14 | 155 | 4 | 145 | 7.41e-13 | 62.8 |
| MS.gene065510.t1 | AT1G62820 | 27.778 | 144 | 100 | 3 | 14 | 155 | 4 | 145 | 1.87e-12 | 62.0 |
| MS.gene065510.t1 | AT1G76640 | 28.169 | 142 | 98 | 2 | 19 | 156 | 18 | 159 | 1.91e-12 | 62.0 |
| MS.gene065510.t1 | AT4G26470 | 27.152 | 151 | 90 | 3 | 21 | 151 | 56 | 206 | 3.79e-11 | 59.7 |
| MS.gene065510.t1 | AT4G26470 | 27.152 | 151 | 90 | 3 | 21 | 151 | 119 | 269 | 4.14e-11 | 60.1 |
| MS.gene065510.t1 | AT5G07320 | 27.586 | 145 | 98 | 3 | 8 | 151 | 23 | 161 | 5.93e-11 | 60.1 |
Find 31 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCACATATGAGGAATTA+AGG | 0.245780 | 5.2:+78326896 | MS.gene065510:CDS |
| TATTGTCTTTATCAAAATAT+TGG | 0.249186 | 5.2:-78327166 | None:intergenic |
| AGCGGAAGTGCGGCAGCTTA+TGG | 0.344504 | 5.2:+78326954 | MS.gene065510:CDS |
| AGAATAGCTTGCCTTGTTGT+TGG | 0.372822 | 5.2:-78327870 | None:intergenic |
| ACCCATACCGTATTCTTTCA+TGG | 0.377027 | 5.2:-78327476 | None:intergenic |
| TAAATATAGGCTGATGTAGA+TGG | 0.393117 | 5.2:+78327056 | MS.gene065510:intron |
| TAAACATTGCCTTCAAACCT+TGG | 0.440948 | 5.2:-78326846 | None:intergenic |
| TAGGCTGATGTAGATGGAAA+TGG | 0.445841 | 5.2:+78327062 | MS.gene065510:intron |
| TGGGTGACGAAGACACAATC+AGG | 0.448197 | 5.2:+78327494 | MS.gene065510:CDS |
| AATCACATATGAGGAATTAA+GGG | 0.464140 | 5.2:+78326897 | MS.gene065510:CDS |
| AGAAGAGATCCAAGGTTTGA+AGG | 0.485295 | 5.2:+78326837 | MS.gene065510:CDS |
| GTCTTTATCAAAATATTGGA+AGG | 0.519390 | 5.2:-78327162 | None:intergenic |
| AATTATATCCGAAGTTGATA+CGG | 0.521231 | 5.2:+78327519 | MS.gene065510:CDS |
| AAGTGGTACAATCACATATG+AGG | 0.521768 | 5.2:+78326888 | MS.gene065510:CDS |
| GAAACAGCCATGAAAGAATA+CGG | 0.523349 | 5.2:+78327469 | MS.gene065510:CDS |
| TACATTATCCGTATCAACTT+CGG | 0.525289 | 5.2:-78327527 | None:intergenic |
| AGCCATGAAAGAATACGGTA+TGG | 0.550102 | 5.2:+78327474 | MS.gene065510:CDS |
| CTTTCATCAGAAGAGATCCA+AGG | 0.556146 | 5.2:+78326829 | MS.gene065510:CDS |
| ACATATGAGGAATTAAGGGC+AGG | 0.579759 | 5.2:+78326901 | MS.gene065510:CDS |
| GAAGGCAATGTTTACTAACA+TGG | 0.588063 | 5.2:+78326855 | MS.gene065510:CDS |
| AGTGACTGGACTAACCTTGA+GGG | 0.589950 | 5.2:-78326372 | None:intergenic |
| AGCTTACTGAAGCGGAAGTG+CGG | 0.599596 | 5.2:+78326944 | MS.gene065510:CDS |
| CGGCTCAAAGCTTACTGAAG+CGG | 0.605346 | 5.2:+78326936 | MS.gene065510:CDS |
| AAGAGATGAGCATCTATACA+AGG | 0.607167 | 5.2:+78327139 | MS.gene065510:CDS |
| CCGCAACAATGCACAGACAC+AGG | 0.615773 | 5.2:+78327111 | MS.gene065510:CDS |
| GCCATGAAAGAATACGGTAT+GGG | 0.618863 | 5.2:+78327475 | MS.gene065510:CDS |
| AACATGGACACTGACAAAAG+TGG | 0.632331 | 5.2:+78326871 | MS.gene065510:CDS |
| AGGAGTGGAGTCCAACAACA+AGG | 0.639339 | 5.2:+78327859 | MS.gene065510:CDS |
| AGGGCAGGATTGCAAAGACT+CGG | 0.639814 | 5.2:+78326916 | MS.gene065510:CDS |
| CCTGTGTCTGTGCATTGTTG+CGG | 0.656937 | 5.2:-78327111 | None:intergenic |
| GGGTGACGAAGACACAATCA+GGG | 0.698537 | 5.2:+78327495 | MS.gene065510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGTTTTAATAATAAAACA+AGG | + | chr5.2:78327316-78327335 | MS.gene065510:intron | 10.0% |
| !! | TATTGTCTTTATCAAAATAT+TGG | - | chr5.2:78327169-78327188 | None:intergenic | 15.0% |
| !!! | TTTTTGCTTTAGTATAAAAA+TGG | + | chr5.2:78327588-78327607 | MS.gene065510:intron | 15.0% |
| !! | AAGTCAATAAAAATTGATCT+TGG | - | chr5.2:78327777-78327796 | None:intergenic | 20.0% |
| !! | AATTACCTAAAAGAAACATT+AGG | - | chr5.2:78326800-78326819 | None:intergenic | 20.0% |
| !! | ATATTCCTTTGCTTAAATAT+AGG | + | chr5.2:78327043-78327062 | MS.gene065510:intron | 20.0% |
| !!! | ATTTTGATAAAGACAATAGT+GGG | + | chr5.2:78327171-78327190 | MS.gene065510:CDS | 20.0% |
| !!! | TATTTTGATAAAGACAATAG+TGG | + | chr5.2:78327170-78327189 | MS.gene065510:CDS | 20.0% |
| !!! | TTTTATACTAAAGCAAAAAC+AGG | - | chr5.2:78327587-78327606 | None:intergenic | 20.0% |
| ! | AATCACATATGAGGAATTAA+GGG | + | chr5.2:78326897-78326916 | MS.gene065510:CDS | 25.0% |
| ! | ACCAATTTACTTGTTTATCT+AGG | - | chr5.2:78327367-78327386 | None:intergenic | 25.0% |
| ! | CAAATCTTGTTGATCAATAA+TGG | - | chr5.2:78326990-78327009 | None:intergenic | 25.0% |
| ! | CCAATTTACTTGTTTATCTA+GGG | - | chr5.2:78327366-78327385 | None:intergenic | 25.0% |
| ! | GTCTTTATCAAAATATTGGA+AGG | - | chr5.2:78327165-78327184 | None:intergenic | 25.0% |
| ! | TTAAACACTTATAGCATAAG+CGG | + | chr5.2:78326533-78326552 | MS.gene065510:intron | 25.0% |
| !! | AAGAATTTTGTACAATGATG+AGG | + | chr5.2:78327839-78327858 | MS.gene065510:CDS | 25.0% |
| !! | TCAAATAAGCTAGTCTAAAT+AGG | + | chr5.2:78326721-78326740 | MS.gene065510:intron | 25.0% |
| !! | TTTTATTACAAGAGATGAAC+TGG | + | chr5.2:78327447-78327466 | MS.gene065510:CDS | 25.0% |
| !!! | AATTATATCCGAAGTTGATA+CGG | + | chr5.2:78327519-78327538 | MS.gene065510:CDS | 25.0% |
| AAACACTTGTGATACTGTTT+AGG | - | chr5.2:78326685-78326704 | None:intergenic | 30.0% | |
| ATAAGCATAAAACAACACTC+TGG | - | chr5.2:78326413-78326432 | None:intergenic | 30.0% | |
| ATCAGCCTATATTTAAGCAA+AGG | - | chr5.2:78327051-78327070 | None:intergenic | 30.0% | |
| CAATCACATATGAGGAATTA+AGG | + | chr5.2:78326896-78326915 | MS.gene065510:CDS | 30.0% | |
| CCCTAGATAAACAAGTAAAT+TGG | + | chr5.2:78327363-78327382 | MS.gene065510:intron | 30.0% | |
| CTATTCATTTAGATAGTGAC+TGG | - | chr5.2:78326389-78326408 | None:intergenic | 30.0% | |
| CTCTTGTAATAAAACTGTGA+TGG | - | chr5.2:78327441-78327460 | None:intergenic | 30.0% | |
| CTTGTTTATCTAGGGAAAAA+AGG | - | chr5.2:78327358-78327377 | None:intergenic | 30.0% | |
| GATGGAATCAAACAAAAACA+AGG | - | chr5.2:78327423-78327442 | None:intergenic | 30.0% | |
| TAAATATAGGCTGATGTAGA+TGG | + | chr5.2:78327056-78327075 | MS.gene065510:intron | 30.0% | |
| TACATTATCCGTATCAACTT+CGG | - | chr5.2:78327530-78327549 | None:intergenic | 30.0% | |
| TATTGAGTGAAACAGAGATT+AGG | - | chr5.2:78326747-78326766 | None:intergenic | 30.0% | |
| TATTGTTACTGCTTTCTATG+TGG | + | chr5.2:78326448-78326467 | MS.gene065510:intron | 30.0% | |
| ! | ATTCGCCTAATGTTTCTTTT+AGG | + | chr5.2:78326792-78326811 | MS.gene065510:intron | 30.0% |
| AAACCTCAAATCAGAGATGT+CGG | + | chr5.2:78327621-78327640 | MS.gene065510:intron | 35.0% | |
| AAGAGATGAGCATCTATACA+AGG | + | chr5.2:78327139-78327158 | MS.gene065510:CDS | 35.0% | |
| AAGTGGTACAATCACATATG+AGG | + | chr5.2:78326888-78326907 | MS.gene065510:CDS | 35.0% | |
| ACTAAAAAAACTTGCCCTCA+AGG | + | chr5.2:78326358-78326377 | MS.gene065510:CDS | 35.0% | |
| ATACTGTTTAGGAGAGCTTA+TGG | - | chr5.2:78326674-78326693 | None:intergenic | 35.0% | |
| CTTATTTCCATAAGCTCTCT+AGG | - | chr5.2:78326616-78326635 | None:intergenic | 35.0% | |
| GAAACAGCCATGAAAGAATA+CGG | + | chr5.2:78327469-78327488 | MS.gene065510:CDS | 35.0% | |
| GAAGGCAATGTTTACTAACA+TGG | + | chr5.2:78326855-78326874 | MS.gene065510:CDS | 35.0% | |
| TAAACATTGCCTTCAAACCT+TGG | - | chr5.2:78326849-78326868 | None:intergenic | 35.0% | |
| TCTAGGGAAAAAAGGATTTC+TGG | - | chr5.2:78327350-78327369 | None:intergenic | 35.0% | |
| ! | TTTTGTACAATGATGAGGAG+TGG | + | chr5.2:78327844-78327863 | MS.gene065510:CDS | 35.0% |
| !! | ATTGACTTGCTATGATGTTG+TGG | + | chr5.2:78327789-78327808 | MS.gene065510:intron | 35.0% |
| !! | TGTTTTGAATCTGATTTGCG+AGG | - | chr5.2:78327674-78327693 | None:intergenic | 35.0% |
| AAATTTGCGCAGCTAGCAAT+CGG | - | chr5.2:78327739-78327758 | None:intergenic | 40.0% | |
| AACATGGACACTGACAAAAG+TGG | + | chr5.2:78326871-78326890 | MS.gene065510:CDS | 40.0% | |
| AAGCTATCCTAGAGAGCTTA+TGG | + | chr5.2:78326606-78326625 | MS.gene065510:intron | 40.0% | |
| ACATATGAGGAATTAAGGGC+AGG | + | chr5.2:78326901-78326920 | MS.gene065510:CDS | 40.0% | |
| ACCCATACCGTATTCTTTCA+TGG | - | chr5.2:78327479-78327498 | None:intergenic | 40.0% | |
| AGAAGAGATCCAAGGTTTGA+AGG | + | chr5.2:78326837-78326856 | MS.gene065510:CDS | 40.0% | |
| AGCCATGAAAGAATACGGTA+TGG | + | chr5.2:78327474-78327493 | MS.gene065510:CDS | 40.0% | |
| CTATGATGTTGTGGTATCTC+AGG | + | chr5.2:78327798-78327817 | MS.gene065510:intron | 40.0% | |
| CTTTCATCAGAAGAGATCCA+AGG | + | chr5.2:78326829-78326848 | MS.gene065510:CDS | 40.0% | |
| GCCATGAAAGAATACGGTAT+GGG | + | chr5.2:78327475-78327494 | MS.gene065510:CDS | 40.0% | |
| TAGGCTGATGTAGATGGAAA+TGG | + | chr5.2:78327062-78327081 | MS.gene065510:intron | 40.0% | |
| ! | AGAATAGCTTGCCTTGTTGT+TGG | - | chr5.2:78327873-78327892 | None:intergenic | 40.0% |
| AGTGACTGGACTAACCTTGA+GGG | - | chr5.2:78326375-78326394 | None:intergenic | 45.0% | |
| CAGAGATGTCGGATGAAGAT+TGG | + | chr5.2:78327632-78327651 | MS.gene065510:intron | 45.0% | |
| GATGTTGTGGTATCTCAGGA+TGG | + | chr5.2:78327802-78327821 | MS.gene065510:intron | 45.0% | |
| TAGTGACTGGACTAACCTTG+AGG | - | chr5.2:78326376-78326395 | None:intergenic | 45.0% | |
| ! | CATCCGACATCTCTGATTTG+AGG | - | chr5.2:78327627-78327646 | None:intergenic | 45.0% |
| AGCTTACTGAAGCGGAAGTG+CGG | + | chr5.2:78326944-78326963 | MS.gene065510:CDS | 50.0% | |
| AGGAGTGGAGTCCAACAACA+AGG | + | chr5.2:78327859-78327878 | MS.gene065510:CDS | 50.0% | |
| AGGGCAGGATTGCAAAGACT+CGG | + | chr5.2:78326916-78326935 | MS.gene065510:CDS | 50.0% | |
| CAGCTAGCAATCGGAGCTAA+TGG | - | chr5.2:78327730-78327749 | None:intergenic | 50.0% | |
| CCTGTGTCTGTGCATTGTTG+CGG | - | chr5.2:78327114-78327133 | None:intergenic | 50.0% | |
| CGGCTCAAAGCTTACTGAAG+CGG | + | chr5.2:78326936-78326955 | MS.gene065510:CDS | 50.0% | |
| GGGTGACGAAGACACAATCA+GGG | + | chr5.2:78327495-78327514 | MS.gene065510:CDS | 50.0% | |
| TGGGTGACGAAGACACAATC+AGG | + | chr5.2:78327494-78327513 | MS.gene065510:CDS | 50.0% | |
| CCGCAACAATGCACAGACAC+AGG | + | chr5.2:78327111-78327130 | MS.gene065510:CDS | 55.0% | |
| ! | AGCGGAAGTGCGGCAGCTTA+TGG | + | chr5.2:78326954-78326973 | MS.gene065510:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 78326350 | 78327894 | 78326350 | ID=MS.gene065510 |
| chr5.2 | mRNA | 78326350 | 78327894 | 78326350 | ID=MS.gene065510.t1;Parent=MS.gene065510 |
| chr5.2 | exon | 78326350 | 78326379 | 78326350 | ID=MS.gene065510.t1.exon1;Parent=MS.gene065510.t1 |
| chr5.2 | CDS | 78326350 | 78326379 | 78326350 | ID=cds.MS.gene065510.t1;Parent=MS.gene065510.t1 |
| chr5.2 | exon | 78326814 | 78326981 | 78326814 | ID=MS.gene065510.t1.exon2;Parent=MS.gene065510.t1 |
| chr5.2 | CDS | 78326814 | 78326981 | 78326814 | ID=cds.MS.gene065510.t1;Parent=MS.gene065510.t1 |
| chr5.2 | exon | 78327065 | 78327192 | 78327065 | ID=MS.gene065510.t1.exon3;Parent=MS.gene065510.t1 |
| chr5.2 | CDS | 78327065 | 78327192 | 78327065 | ID=cds.MS.gene065510.t1;Parent=MS.gene065510.t1 |
| chr5.2 | exon | 78327447 | 78327546 | 78327447 | ID=MS.gene065510.t1.exon4;Parent=MS.gene065510.t1 |
| chr5.2 | CDS | 78327447 | 78327546 | 78327447 | ID=cds.MS.gene065510.t1;Parent=MS.gene065510.t1 |
| chr5.2 | exon | 78327820 | 78327894 | 78327820 | ID=MS.gene065510.t1.exon5;Parent=MS.gene065510.t1 |
| chr5.2 | CDS | 78327820 | 78327894 | 78327820 | ID=cds.MS.gene065510.t1;Parent=MS.gene065510.t1 |
| Gene Sequence |
| Protein sequence |
