AlfalfaGEDB | MS.gene068659

M. sativa cultivar XinJiangDaYe / MS.gene068659

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene068659.t1	XP_013464384.1	90.8	381	35	0	1	381	1	381	1.30E-118	436.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene068659.t1	Q9M9F9	45.3	384	143	10	2	381	4	324	4.3e-33	143.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene068659.t1	A0A072V8T5	90.8	381	35	0	1	381	1	381	9.7e-119	436.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049190	MS.gene068659	0.803078	4.14E-49	-1.69E-46
MS.gene049341	MS.gene068659	0.829154	6.03E-55	-1.69E-46
MS.gene049821	MS.gene068659	0.809706	1.66E-50	-1.69E-46
MS.gene049887	MS.gene068659	0.805451	1.33E-49	-1.69E-46
MS.gene049979	MS.gene068659	0.804224	2.39E-49	-1.69E-46
MS.gene050020	MS.gene068659	0.837286	5.68E-57	-1.69E-46
MS.gene050194	MS.gene068659	0.809911	1.50E-50	-1.69E-46
MS.gene050807	MS.gene068659	0.860694	1.73E-63	-1.69E-46
MS.gene050808	MS.gene068659	0.819586	1.07E-52	-1.69E-46
MS.gene051247	MS.gene068659	0.814143	1.79E-51	-1.69E-46
MS.gene051328	MS.gene068659	0.81266	3.79E-51	-1.69E-46
MS.gene05157	MS.gene068659	0.817169	3.79E-52	-1.69E-46
MS.gene051700	MS.gene068659	0.825928	3.59E-54	-1.69E-46
MS.gene051719	MS.gene068659	0.83572	1.42E-56	-1.69E-46
MS.gene051720	MS.gene068659	0.847449	1.15E-59	-1.69E-46
MS.gene051885	MS.gene068659	0.809338	1.99E-50	-1.69E-46
MS.gene052020	MS.gene068659	0.805121	1.56E-49	-1.69E-46
MS.gene052133	MS.gene068659	0.859988	2.83E-63	-1.69E-46
MS.gene052665	MS.gene068659	0.836336	9.94E-57	-1.69E-46
MS.gene052732	MS.gene068659	0.840375	9.03E-58	-1.69E-46
MS.gene052947	MS.gene068659	0.82675	2.29E-54	-1.69E-46
MS.gene053144	MS.gene068659	0.845056	5.15E-59	-1.69E-46
MS.gene053174	MS.gene068659	0.835579	1.55E-56	-1.69E-46
MS.gene053437	MS.gene068659	0.819656	1.04E-52	-1.69E-46
MS.gene053581	MS.gene068659	0.851984	6.22E-61	-1.69E-46
MS.gene053599	MS.gene068659	0.818911	1.53E-52	-1.69E-46
MS.gene054550	MS.gene068659	0.841464	4.68E-58	-1.69E-46
MS.gene054584	MS.gene068659	0.842599	2.34E-58	-1.69E-46
MS.gene055465	MS.gene068659	0.852957	3.28E-61	-1.69E-46
MS.gene055466	MS.gene068659	0.850033	2.21E-60	-1.69E-46
MS.gene055468	MS.gene068659	0.848863	4.67E-60	-1.69E-46
MS.gene055469	MS.gene068659	0.83421	3.42E-56	-1.69E-46
MS.gene055512	MS.gene068659	0.825531	4.46E-54	-1.69E-46
MS.gene055537	MS.gene068659	0.835885	1.29E-56	-1.69E-46
MS.gene055580	MS.gene068659	-0.861318	1.12E-63	-1.69E-46
MS.gene055890	MS.gene068659	0.846716	1.82E-59	-1.69E-46
MS.gene055891	MS.gene068659	0.852444	4.60E-61	-1.69E-46
MS.gene056005	MS.gene068659	0.825541	4.43E-54	-1.69E-46
MS.gene056043	MS.gene068659	-0.852695	3.90E-61	-1.69E-46
MS.gene056553	MS.gene068659	0.810781	9.72E-51	-1.69E-46
MS.gene056584	MS.gene068659	0.824767	6.75E-54	-1.69E-46
MS.gene058339	MS.gene068659	0.802951	4.40E-49	-1.69E-46
MS.gene058852	MS.gene068659	0.831926	1.27E-55	-1.69E-46
MS.gene058906	MS.gene068659	0.810843	9.42E-51	-1.69E-46
MS.gene058945	MS.gene068659	0.800037	1.74E-48	-1.69E-46
MS.gene059171	MS.gene068659	0.808707	2.71E-50	-1.69E-46
MS.gene059937	MS.gene068659	0.843522	1.33E-58	-1.69E-46
MS.gene06001	MS.gene068659	0.835244	1.88E-56	-1.69E-46
MS.gene060194	MS.gene068659	0.836721	7.93E-57	-1.69E-46
MS.gene060429	MS.gene068659	0.812992	3.21E-51	-1.69E-46
MS.gene060519	MS.gene068659	0.815629	8.38E-52	-1.69E-46
MS.gene060587	MS.gene068659	0.856325	3.47E-62	-1.69E-46
MS.gene061176	MS.gene068659	0.817625	2.99E-52	-1.69E-46
MS.gene061177	MS.gene068659	0.816109	6.55E-52	-1.69E-46
MS.gene061178	MS.gene068659	0.817116	3.90E-52	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene015165	MS.gene068659	PPI
MS.gene99203	MS.gene068659	PPI
MS.gene068659	MS.gene011812	PPI
MS.gene068659	MS.gene99206	PPI
MS.gene90504	MS.gene068659	PPI
MS.gene068659	MS.gene011814	PPI
MS.gene068659	MS.gene99207	PPI
MS.gene38726	MS.gene068659	PPI
MS.gene068659	MS.gene054632	PPI
MS.gene56784	MS.gene068659	PPI
MS.gene068659	MS.gene48491	PPI
MS.gene068659	MS.gene047616	PPI
MS.gene068659	MS.gene90503	PPI
MS.gene068659	MS.gene56785	PPI
MS.gene068659	MS.gene90505	PPI
MS.gene068659	MS.gene010337	PPI
MS.gene068659	MS.gene011807	PPI
MS.gene068659	MS.gene062821	PPI
MS.gene047618	MS.gene068659	PPI
MS.gene068659	MS.gene015162	PPI
MS.gene068659	MS.gene60217	PPI
MS.gene068659	MS.gene041073	PPI
MS.gene011810	MS.gene068659	PPI
MS.gene068659	MS.gene012993	PPI
MS.gene068659	MS.gene041069	PPI
MS.gene068659	MS.gene99208	PPI
MS.gene010341	MS.gene068659	PPI
MS.gene068659	MS.gene063452	PPI
MS.gene90501	MS.gene068659	PPI
MS.gene068659	MS.gene039215	PPI
MS.gene011811	MS.gene068659	PPI
MS.gene068659	MS.gene56786	PPI
MS.gene068659	MS.gene56787	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene068659.t1	MTR_2g070730	94.226	381	22	0	1	381	1	381	0.0	653
MS.gene068659.t1	MTR_8g008740	98.101	158	3	0	224	381	324	481	5.95e-89	276
MS.gene068659.t1	MTR_4g461060	32.796	186	97	6	200	377	452	617	1.64e-14	75.5
MS.gene068659.t1	MTR_4g461060	32.796	186	97	6	200	377	449	614	1.91e-14	75.1
MS.gene068659.t1	MTR_1g066850	29.949	197	114	6	195	380	403	586	3.00e-11	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene068659.t1	AT1G17140	47.656	384	158	11	1	381	1	344	3.50e-86	265
MS.gene068659.t1	AT1G17140	47.656	384	158	11	1	381	1	344	3.50e-86	265
MS.gene068659.t1	AT1G78430	48.438	384	131	12	2	381	4	324	3.74e-82	254
MS.gene068659.t1	AT5G60210	27.052	329	179	12	66	377	277	561	1.70e-13	72.4
MS.gene068659.t1	AT5G60210	27.052	329	179	12	66	377	277	561	1.70e-13	72.4
MS.gene068659.t1	AT5G60210	27.052	329	179	12	66	377	277	561	1.70e-13	72.4
MS.gene068659.t1	AT5G60210	27.052	329	179	12	66	377	277	561	1.70e-13	72.4
MS.gene068659.t1	AT5G60210	27.052	329	179	12	66	377	301	585	1.72e-13	72.4
MS.gene068659.t1	AT5G60210	27.052	329	179	12	66	377	301	585	1.72e-13	72.4
MS.gene068659.t1	AT3G53350	26.273	373	196	12	2	305	4	366	2.47e-12	68.2
MS.gene068659.t1	AT3G53350	26.273	373	196	12	2	305	4	366	2.47e-12	68.2
MS.gene068659.t1	AT3G53350	25.886	367	195	11	6	305	21	377	9.72e-12	66.6
MS.gene068659.t1	AT3G53350	26.005	373	199	13	2	305	4	368	2.76e-11	65.1
MS.gene068659.t1	AT3G53350	26.005	373	199	13	2	305	4	368	2.76e-11	65.1
MS.gene068659.t1	AT3G53350	26.005	373	199	13	2	305	4	368	2.76e-11	65.1
MS.gene068659.t1	AT2G37080	39.496	119	60	4	2	113	6	119	6.10e-11	64.3

Find 69 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTAGAATGTTTGGTGATTTA+TGG	0.158925	2.2:-21100764	MS.gene068659:CDS
GCTGCAGCTGCGGTGCTTGC+AGG	0.187779	2.2:-21100969	MS.gene068659:CDS
TCCATTGAACCACACCTTTC+AGG	0.188017	2.2:+21100915	None:intergenic
CGGAACACGCATTGCAGATT+TGG	0.243840	2.2:-21101675	MS.gene068659:CDS
TTCTCTGGCTTTGATGTTGC+TGG	0.259937	2.2:+21101329	None:intergenic
CTTCATTCAGTTGATTCTTC+AGG	0.293407	2.2:+21101198	None:intergenic
GAAGAAATTGAGTAAAGAAT+TGG	0.311524	2.2:-21101120	MS.gene068659:CDS
TCTTCTGGTATTAGAATGTT+TGG	0.317878	2.2:-21100774	MS.gene068659:CDS
GATGATCTGGATGATGGTTT+TGG	0.318666	2.2:-21100816	MS.gene068659:CDS
GATCGTCGGTCTCCTAGTTT+TGG	0.320194	2.2:+21101743	None:intergenic
TCCTGGTATGGTTGATGATC+TGG	0.327726	2.2:-21100829	MS.gene068659:CDS
AGCGTCGTTGAAATCAAGTT+TGG	0.357678	2.2:-21101267	MS.gene068659:CDS
GCAGGTGCGGAAATCACTTT+TGG	0.364207	2.2:+21100730	None:intergenic
TTTGGACTTCGGTCAGTAAC+CGG	0.385141	2.2:+21101761	None:intergenic
TCCTCCACAAAAGGCTTCTC+TGG	0.388495	2.2:+21101314	None:intergenic
TAACATACATACCTTGATCT+TGG	0.405582	2.2:+21102144	None:intergenic
ACCTGTTGATGTATTTGAAA+AGG	0.409716	2.2:-21101366	MS.gene068659:CDS
AAGAATTGGAAGCTAGTAAA+GGG	0.424711	2.2:-21101106	MS.gene068659:CDS
GAAATCTGTGGAAGAAGAAA+AGG	0.430192	2.2:-21101057	MS.gene068659:CDS
TGAAGTTCCTATCGAAAAGT+TGG	0.430569	2.2:-21101405	MS.gene068659:CDS
TCCTGAAAGGTGTGGTTCAA+TGG	0.435919	2.2:-21100916	MS.gene068659:CDS
TTGATATGAGTGCTGCTGCT+AGG	0.438889	2.2:-21100941	MS.gene068659:CDS
AGCAGCTGATGCTGCAGCTG+CGG	0.457933	2.2:-21100979	MS.gene068659:CDS
AAAGAATTGGAAGCTAGTAA+AGG	0.459045	2.2:-21101107	MS.gene068659:CDS
GGTGATTTATGGAAGAAGAA+AGG	0.459584	2.2:-21100753	MS.gene068659:CDS
CATGGATATGTAGGTTCTCC+TGG	0.462446	2.2:-21100846	MS.gene068659:CDS
GCAGCTGCGGTGCTTGCAGG+AGG	0.462525	2.2:-21100966	MS.gene068659:CDS
AGTGTCAGCTCCTCCACAAA+AGG	0.466933	2.2:+21101305	None:intergenic
TCAGATTGAGTAGTACCTCT+TGG	0.487556	2.2:+21101719	None:intergenic
AATCAGAAATGAAGAAGCTA+AGG	0.488261	2.2:-21101025	MS.gene068659:CDS
TGATATGAGTGCTGCTGCTA+GGG	0.490148	2.2:-21100940	MS.gene068659:CDS
ACACCTGGTGGAAGGTATCA+TGG	0.495632	2.2:-21100864	MS.gene068659:CDS
CATATCAAATGCCAAGATCA+AGG	0.498306	2.2:-21102155	None:intergenic
ATGGATAAGCACTTTGGCGG+TGG	0.498541	2.2:-21100897	MS.gene068659:CDS
ATGGTTGATGATCTGGATGA+TGG	0.513817	2.2:-21100822	MS.gene068659:CDS
GGAAGGTATCATGGATATGT+AGG	0.515502	2.2:-21100855	MS.gene068659:CDS
GTCGTTGAAATCAAGTTTGG+AGG	0.523652	2.2:-21101264	MS.gene068659:CDS
ATATGTAGGTTCTCCTGGTA+TGG	0.532614	2.2:-21100841	MS.gene068659:CDS
GCTGCTGAAACAAAAGAAGA+AGG	0.541331	2.2:-21101158	MS.gene068659:CDS
GCAGATTTGGAATCACAGCT+TGG	0.551467	2.2:-21101662	MS.gene068659:CDS
CAAGAGGTACTCATCAGCTT+CGG	0.558421	2.2:-21101823	MS.gene068659:CDS
TCAGGTATAATAACATCTTG+AGG	0.560208	2.2:+21101455	None:intergenic
TCAATGGATAAGCACTTTGG+CGG	0.562568	2.2:-21100900	MS.gene068659:CDS
AAAAGAAGAAGGAATGACAA+TGG	0.571449	2.2:-21101147	MS.gene068659:CDS
TCCATCACATCATCATCGAC+CGG	0.578161	2.2:-21101780	MS.gene068659:CDS
ACAGTAAATCAGAAGAAGCT+CGG	0.580748	2.2:-21101695	MS.gene068659:CDS
GGTTCAATGGATAAGCACTT+TGG	0.584940	2.2:-21100903	MS.gene068659:CDS
CGAAGCTGATGAGTACCTCT+TGG	0.586620	2.2:+21101824	None:intergenic
CCTCTTGGTGACTGCCTCTG+AGG	0.586987	2.2:+21101839	None:intergenic
TCCAGATCATCAACCATACC+AGG	0.598846	2.2:+21100828	None:intergenic
CTGCTGCTAGGGTTCCTGAA+AGG	0.600125	2.2:-21100929	MS.gene068659:CDS
TAGTACCTCTTGGAGATCGT+CGG	0.608078	2.2:+21101729	None:intergenic
CTGTGGAAGAAGAAAAGGCA+GGG	0.608960	2.2:-21101052	MS.gene068659:CDS
ACCGGTCGATGATGATGTGA+TGG	0.611787	2.2:+21101779	None:intergenic
ATCAGAAATGAAGAAGCTAA+GGG	0.620572	2.2:-21101024	MS.gene068659:CDS
CATTTGAGACACCTGGTGGA+AGG	0.626032	2.2:-21100872	MS.gene068659:CDS
AGCTCAATCAGTAGTTCCTG+TGG	0.631311	2.2:-21101549	MS.gene068659:CDS
TCTGTGGAAGAAGAAAAGGC+AGG	0.632238	2.2:-21101053	MS.gene068659:CDS
GGGGAACTGATTTGCCTCAG+AGG	0.632430	2.2:-21101853	MS.gene068659:CDS
ACTGACCGAAGTCCAAAACT+AGG	0.638929	2.2:-21101755	MS.gene068659:CDS
GCTAGGGTTCCTGAAAGGTG+TGG	0.647120	2.2:-21100924	MS.gene068659:CDS
ATGATGTGATGGATCTGAGT+CGG	0.663820	2.2:+21101790	None:intergenic
GGTGGAACATTTGAGACACC+TGG	0.665184	2.2:-21100879	MS.gene068659:CDS
TATCCATGATACCTTCCACC+AGG	0.668548	2.2:+21100861	None:intergenic
GAATGAGAAGTTGAAATCTG+TGG	0.677488	2.2:-21101069	MS.gene068659:CDS
CCTCAGAGGCAGTCACCAAG+AGG	0.691940	2.2:-21101839	MS.gene068659:CDS
TAAGGGTGCAGACAGAACAA+TGG	0.700140	2.2:-21101007	MS.gene068659:CDS
GGAACATTTGAGACACCTGG+TGG	0.711032	2.2:-21100876	MS.gene068659:CDS
GGAGACCGACGATCTCCAAG+AGG	0.717137	2.2:-21101734	MS.gene068659:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATAATTACATTTTAAAAGA+AGG	+	chr2.2:21100802-21100821	None:intergenic	10.0%
!!	TGATATAAAAAACAAAATCA+TGG	-	chr2.2:21100914-21100933	MS.gene068659:CDS	15.0%
!!!	ATTAATTGTTGTTTTCAAAT+AGG	-	chr2.2:21101016-21101035	MS.gene068659:CDS	15.0%
!!!	TGTTTTTTATATCAAAATCA+GGG	+	chr2.2:21100908-21100927	None:intergenic	15.0%
!!!	TTAATTGTTGTTTTCAAATA+GGG	-	chr2.2:21101017-21101036	MS.gene068659:CDS	15.0%
!!!	TTGTTTTTTATATCAAAATC+AGG	+	chr2.2:21100909-21100928	None:intergenic	15.0%
!!!	TAATTGTTGTTTTCAAATAG+GGG	-	chr2.2:21101018-21101037	MS.gene068659:CDS	20.0%
!	AAGTTTGGAGGAAAAAAATA+AGG	-	chr2.2:21101638-21101657	MS.gene068659:CDS	25.0%
!	ACGGTGTTTAAAAAAAATCA+CGG	+	chr2.2:21100975-21100994	None:intergenic	25.0%
!	ATTAATACAGCTTAAACGTT+TGG	+	chr2.2:21101002-21101021	None:intergenic	25.0%
!	GAAGAAATTGAGTAAAGAAT+TGG	-	chr2.2:21101770-21101789	MS.gene068659:CDS	25.0%
!	TTTAAAAAAAATCACGGTCT+CGG	+	chr2.2:21100969-21100988	None:intergenic	25.0%
!!	TTAGAATGTTTGGTGATTTA+TGG	-	chr2.2:21102126-21102145	MS.gene068659:intron	25.0%
	AAAAGAAGAAGGAATGACAA+TGG	-	chr2.2:21101743-21101762	MS.gene068659:CDS	30.0%
	AAAGAATTGGAAGCTAGTAA+AGG	-	chr2.2:21101783-21101802	MS.gene068659:CDS	30.0%
	AAGAATTGGAAGCTAGTAAA+GGG	-	chr2.2:21101784-21101803	MS.gene068659:CDS	30.0%
	AATCAGAAATGAAGAAGCTA+AGG	-	chr2.2:21101865-21101884	MS.gene068659:intron	30.0%
	ACCTGTTGATGTATTTGAAA+AGG	-	chr2.2:21101524-21101543	MS.gene068659:CDS	30.0%
	ATCAGAAATGAAGAAGCTAA+GGG	-	chr2.2:21101866-21101885	MS.gene068659:intron	30.0%
	GTATAACATGATTAGTAGCA+AGG	+	chr2.2:21100831-21100850	None:intergenic	30.0%
	TAACATACATACCTTGATCT+TGG	+	chr2.2:21100749-21100768	None:intergenic	30.0%
	TCAGGTATAATAACATCTTG+AGG	+	chr2.2:21101438-21101457	None:intergenic	30.0%
	TCTTCTGGTATTAGAATGTT+TGG	-	chr2.2:21102116-21102135	MS.gene068659:intron	30.0%
!	TCCTTTTCAAATACATCAAC+AGG	+	chr2.2:21101528-21101547	None:intergenic	30.0%
!	TTTTGATAGACTGTGAGTTT+AGG	-	chr2.2:21100864-21100883	MS.gene068659:CDS	30.0%
!!	TTTGGTAGTGGAAAAAAGAA+GGG	-	chr2.2:21102092-21102111	MS.gene068659:intron	30.0%
!!!	TTTTGGTAGTGGAAAAAAGA+AGG	-	chr2.2:21102091-21102110	MS.gene068659:intron	30.0%
	ACAGTAAATCAGAAGAAGCT+CGG	-	chr2.2:21101195-21101214	MS.gene068659:CDS	35.0%
	AGCTGAAAAGAAAAAAGCTG+AGG	-	chr2.2:21101302-21101321	MS.gene068659:CDS	35.0%
	GAAATCTGTGGAAGAAGAAA+AGG	-	chr2.2:21101833-21101852	MS.gene068659:CDS	35.0%
	GAATGAGAAGTTGAAATCTG+TGG	-	chr2.2:21101821-21101840	MS.gene068659:CDS	35.0%
	GGAGGAAAAAAATAAGGAAC+TGG	-	chr2.2:21101644-21101663	MS.gene068659:CDS	35.0%
	GGTGATTTATGGAAGAAGAA+AGG	-	chr2.2:21102137-21102156	MS.gene068659:intron	35.0%
	TGAAGTTCCTATCGAAAAGT+TGG	-	chr2.2:21101485-21101504	MS.gene068659:CDS	35.0%
!	AGCTTAAACGTTTGGAATCA+CGG	+	chr2.2:21100994-21101013	None:intergenic	35.0%
!	CTTCATTCAGTTGATTCTTC+AGG	+	chr2.2:21101695-21101714	None:intergenic	35.0%
!	GTCTCTTCTTGATTTTCATC+AGG	+	chr2.2:21101456-21101475	None:intergenic	35.0%
!	TCAATTGCCAACTTTTCGAT+AGG	+	chr2.2:21101495-21101514	None:intergenic	35.0%
!	TCTTGAAACTTTTCTACCAC+AGG	+	chr2.2:21101360-21101379	None:intergenic	35.0%
	AGCGTCGTTGAAATCAAGTT+TGG	-	chr2.2:21101623-21101642	MS.gene068659:CDS	40.0%
	ATATGTAGGTTCTCCTGGTA+TGG	-	chr2.2:21102049-21102068	MS.gene068659:intron	40.0%
	GCTGCTGAAACAAAAGAAGA+AGG	-	chr2.2:21101732-21101751	MS.gene068659:CDS	40.0%
	GGAAAAAAGAAGGGTTCTTC+TGG	-	chr2.2:21102101-21102120	MS.gene068659:intron	40.0%
	GGTTCAATGGATAAGCACTT+TGG	-	chr2.2:21101987-21102006	MS.gene068659:intron	40.0%
	GTCGTTGAAATCAAGTTTGG+AGG	-	chr2.2:21101626-21101645	MS.gene068659:CDS	40.0%
	TCAATGGATAAGCACTTTGG+CGG	-	chr2.2:21101990-21102009	MS.gene068659:intron	40.0%
	TCAGATTGAGTAGTACCTCT+TGG	+	chr2.2:21101174-21101193	None:intergenic	40.0%
!!	ATGATGTGATGGATCTGAGT+CGG	+	chr2.2:21101103-21101122	None:intergenic	40.0%
!!	ATGGTTGATGATCTGGATGA+TGG	-	chr2.2:21102068-21102087	MS.gene068659:intron	40.0%
!!	GATGATCTGGATGATGGTTT+TGG	-	chr2.2:21102074-21102093	MS.gene068659:intron	40.0%
!!	GGAAGGTATCATGGATATGT+AGG	-	chr2.2:21102035-21102054	MS.gene068659:intron	40.0%
	ACTGACCGAAGTCCAAAACT+AGG	-	chr2.2:21101135-21101154	MS.gene068659:CDS	45.0%
	AGCTCAATCAGTAGTTCCTG+TGG	-	chr2.2:21101341-21101360	MS.gene068659:CDS	45.0%
	CATGGATATGTAGGTTCTCC+TGG	-	chr2.2:21102044-21102063	MS.gene068659:intron	45.0%
	CTGTGGAAGAAGAAAAGGCA+GGG	-	chr2.2:21101838-21101857	MS.gene068659:CDS	45.0%
	TAGTACCTCTTGGAGATCGT+CGG	+	chr2.2:21101164-21101183	None:intergenic	45.0%
	TATCCATGATACCTTCCACC+AGG	+	chr2.2:21102032-21102051	None:intergenic	45.0%
	TCCAGATCATCAACCATACC+AGG	+	chr2.2:21102065-21102084	None:intergenic	45.0%
	TCCATCACATCATCATCGAC+CGG	-	chr2.2:21101110-21101129	MS.gene068659:CDS	45.0%
	TCCATTGAACCACACCTTTC+AGG	+	chr2.2:21101978-21101997	None:intergenic	45.0%
	TCTGTGGAAGAAGAAAAGGC+AGG	-	chr2.2:21101837-21101856	MS.gene068659:CDS	45.0%
	TGTGAGTTTAGGCAGAATCG+TGG	-	chr2.2:21100875-21100894	MS.gene068659:CDS	45.0%
	TTTGGACTTCGGTCAGTAAC+CGG	+	chr2.2:21101132-21101151	None:intergenic	45.0%
!	AAAGCCAGAGAAGCCTTTTG+TGG	-	chr2.2:21101572-21101591	MS.gene068659:CDS	45.0%
!	GCAGATTTGGAATCACAGCT+TGG	-	chr2.2:21101228-21101247	MS.gene068659:CDS	45.0%
!	TAAGGGTGCAGACAGAACAA+TGG	-	chr2.2:21101883-21101902	MS.gene068659:intron	45.0%
!	TCACGGTCTCGGATTTTGTT+AGG	+	chr2.2:21100958-21100977	None:intergenic	45.0%
!	TCCTGAAAGGTGTGGTTCAA+TGG	-	chr2.2:21101974-21101993	MS.gene068659:intron	45.0%
!	TGATATGAGTGCTGCTGCTA+GGG	-	chr2.2:21101950-21101969	MS.gene068659:intron	45.0%
!	TTGATATGAGTGCTGCTGCT+AGG	-	chr2.2:21101949-21101968	MS.gene068659:intron	45.0%
!!	CAAGAGGTACTCATCAGCTT+CGG	-	chr2.2:21101067-21101086	MS.gene068659:CDS	45.0%
!!	TCCTGGTATGGTTGATGATC+TGG	-	chr2.2:21102061-21102080	MS.gene068659:intron	45.0%
!!	TTCTCTGGCTTTGATGTTGC+TGG	+	chr2.2:21101564-21101583	None:intergenic	45.0%
!!!	CTGGATGATGGTTTTGGTAG+TGG	-	chr2.2:21102080-21102099	MS.gene068659:intron	45.0%
!!!	GGTCTCCTAGTTTTGGACTT+CGG	+	chr2.2:21101143-21101162	None:intergenic	45.0%
	AGTGTCAGCTCCTCCACAAA+AGG	+	chr2.2:21101588-21101607	None:intergenic	50.0%
	ATGGATAAGCACTTTGGCGG+TGG	-	chr2.2:21101993-21102012	MS.gene068659:intron	50.0%
	CGAAGCTGATGAGTACCTCT+TGG	+	chr2.2:21101069-21101088	None:intergenic	50.0%
	CGGAACACGCATTGCAGATT+TGG	-	chr2.2:21101215-21101234	MS.gene068659:CDS	50.0%
	TCCTCCACAAAAGGCTTCTC+TGG	+	chr2.2:21101579-21101598	None:intergenic	50.0%
!	ACCGGTCGATGATGATGTGA+TGG	+	chr2.2:21101114-21101133	None:intergenic	50.0%
!	CATTTGAGACACCTGGTGGA+AGG	-	chr2.2:21102018-21102037	MS.gene068659:intron	50.0%
!	GATCGTCGGTCTCCTAGTTT+TGG	+	chr2.2:21101150-21101169	None:intergenic	50.0%
!	GGAACATTTGAGACACCTGG+TGG	-	chr2.2:21102014-21102033	MS.gene068659:intron	50.0%
!	GGTGGAACATTTGAGACACC+TGG	-	chr2.2:21102011-21102030	MS.gene068659:intron	50.0%
!!	ACACCTGGTGGAAGGTATCA+TGG	-	chr2.2:21102026-21102045	MS.gene068659:intron	50.0%
	CTGCTGCTAGGGTTCCTGAA+AGG	-	chr2.2:21101961-21101980	MS.gene068659:intron	55.0%
	GCTAGGGTTCCTGAAAGGTG+TGG	-	chr2.2:21101966-21101985	MS.gene068659:intron	55.0%
!	GCCAGAGAAGCCTTTTGTGG+AGG	-	chr2.2:21101575-21101594	MS.gene068659:CDS	55.0%
!!	GGGGAACTGATTTGCCTCAG+AGG	-	chr2.2:21101037-21101056	MS.gene068659:CDS	55.0%
	AGCAGCTGATGCTGCAGCTG+CGG	-	chr2.2:21101911-21101930	MS.gene068659:intron	60.0%
	CCTCAGAGGCAGTCACCAAG+AGG	-	chr2.2:21101051-21101070	MS.gene068659:CDS	60.0%
	GGAGACCGACGATCTCCAAG+AGG	-	chr2.2:21101156-21101175	MS.gene068659:CDS	60.0%
!	CCTCTTGGTGACTGCCTCTG+AGG	+	chr2.2:21101054-21101073	None:intergenic	60.0%
	GCAGCTGCGGTGCTTGCAGG+AGG	-	chr2.2:21101924-21101943	MS.gene068659:intron	70.0%
	GCTGCAGCTGCGGTGCTTGC+AGG	-	chr2.2:21101921-21101940	MS.gene068659:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.2	gene	21100743	21102169	21100743	ID=MS.gene068659
chr2.2	mRNA	21100743	21102169	21100743	ID=MS.gene068659.t1;Parent=MS.gene068659
chr2.2	exon	21102156	21102169	21102156	ID=MS.gene068659.t1.exon1;Parent=MS.gene068659.t1
chr2.2	CDS	21102156	21102169	21102156	ID=cds.MS.gene068659.t1;Parent=MS.gene068659.t1
chr2.2	exon	21100743	21101874	21100743	ID=MS.gene068659.t1.exon2;Parent=MS.gene068659.t1
chr2.2	CDS	21100743	21101874	21100743	ID=cds.MS.gene068659.t1;Parent=MS.gene068659.t1

Gene Sequence

>MS.gene068659

ATGCCAAGATCAAGGTATGTATGTTAAGCTAACTTATAAAGTTACTATTATTTCTGCCTTCTTTTAAAATGTAATTATTTGATCTCCTTGCTACTAATCATGTTATACAACATTATGCATGTTTTGATAGACTGTGAGTTTAGGCAGAATCGTGGTGTGCTGCCCTGATTTTGATATAAAAAACAAAATCATGGCAACACACTGCGATTCTGCCTAACAAAATCCGAGACCGTGATTTTTTTTAAACACCGTGATTCCAAACGTTTAAGCTGTATTAATTGTTGTTTTCAAATAGGGGAACTGATTTGCCTCAGAGGCAGTCACCAAGAGGTACTCATCAGCTTCGGACATCGAGTTCCGACTCAGATCCATCACATCATCATCGACCGGTTACTGACCGAAGTCCAAAACTAGGAGACCGACGATCTCCAAGAGGTACTACTCAATCTGAGACAGTAAATCAGAAGAAGCTCGGAACACGCATTGCAGATTTGGAATCACAGCTTGGTCAAGCACAACAAGAGTTGAAAAATTTGAAAAATCAACTATCTTCTGCAGAAGCTGAAAAGAAAAAAGCTGAGGATGAACTAGTGAAGAAAGCTCAATCAGTAGTTCCTGTGGTAGAAAAGTTTCAAGAGAAAAAAAGCATTTCAAAGAAAGCTCAAGAATGTAACATCAAAGCTGAAACAAAACCTCAAGATGTTATTATACCTGATGAAAATCAAGAAGAGACTGATGTGTTTGAAGTTCCTATCGAAAAGTTGGCAATTGAATTCAAAAAACCTGTTGATGTATTTGAAAAGGAAACTCAAACTCAACCAGCAACATCAAAGCCAGAGAAGCCTTTTGTGGAGGAGCTGACACTAAAAAACAAAGAAATAGCGTCGTTGAAATCAAGTTTGGAGGAAAAAAATAAGGAACTGGAATCAATCAGTAATGAAAATGATAACCTGAAGAATCAACTGAATGAAGCAGTTTCAAAAGTAAAAGCTGCTGAAACAAAAGAAGAAGGAATGACAATGGAGATGAAGAAATTGAGTAAAGAATTGGAAGCTAGTAAAGGGAATGCAGAGAAGTTGAATGAGAAGTTGAAATCTGTGGAAGAAGAAAAGGCAGGGTTAGAATCAGAAATGAAGAAGCTAAGGGTGCAGACAGAACAATGGAGAAAAGCAGCTGATGCTGCAGCTGCGGTGCTTGCAGGAGGTTTTGATATGAGTGCTGCTGCTAGGGTTCCTGAAAGGTGTGGTTCAATGGATAAGCACTTTGGCGGTGGAACATTTGAGACACCTGGTGGAAGGTATCATGGATATGTAGGTTCTCCTGGTATGGTTGATGATCTGGATGATGGTTTTGGTAGTGGAAAAAAGAAGGGTTCTTCTGGTATTAGAATGTTTGGTGATTTATGGAAGAAGAAAGGCCAAAAGTGA

Protein sequence

>MS.gene068659.t1

MPRSRGTDLPQRQSPRGTHQLRTSSSDSDPSHHHRPVTDRSPKLGDRRSPRGTTQSETVNQKKLGTRIADLESQLGQAQQELKNLKNQLSSAEAEKKKAEDELVKKAQSVVPVVEKFQEKKSISKKAQECNIKAETKPQDVIIPDENQEETDVFEVPIEKLAIEFKKPVDVFEKETQTQPATSKPEKPFVEELTLKNKEIASLKSSLEEKNKELESISNENDNLKNQLNEAVSKVKAAETKEEGMTMEMKKLSKELEASKGNAEKLNEKLKSVEEEKAGLESEMKKLRVQTEQWRKAADAAAAVLAGGFDMSAAARVPERCGSMDKHFGGGTFETPGGRYHGYVGSPGMVDDLDDGFGSGKKKGSSGIRMFGDLWKKKGQK