Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08523.t1 | XP_013444550.1 | 95 | 379 | 18 | 1 | 1 | 378 | 383 | 761 | 2.20E-201 | 711.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08523.t1 | O82777 | 44.8 | 375 | 195 | 8 | 7 | 376 | 388 | 755 | 2.7e-75 | 283.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08523.t1 | A0A072TYE4 | 95.0 | 379 | 18 | 1 | 1 | 378 | 383 | 761 | 1.6e-201 | 711.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene08523 | 0.806318 | 8.72E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene08523 | 0.813834 | 2.09E-51 | -1.69E-46 |
| MS.gene049373 | MS.gene08523 | 0.824222 | 9.07E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene08523 | 0.824714 | 6.95E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene08523 | 0.852208 | 5.37E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene08523 | 0.800824 | 1.20E-48 | -1.69E-46 |
| MS.gene050577 | MS.gene08523 | 0.830756 | 2.45E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene08523 | 0.820938 | 5.27E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene08523 | 0.822802 | 1.95E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene08523 | 0.802674 | 5.02E-49 | -1.69E-46 |
| MS.gene05081 | MS.gene08523 | 0.818659 | 1.75E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene08523 | 0.817583 | 3.06E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene08523 | 0.846657 | 1.89E-59 | -1.69E-46 |
| MS.gene051941 | MS.gene08523 | 0.80721 | 5.65E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene08523 | 0.803303 | 3.72E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene08523 | 0.861218 | 1.20E-63 | -1.69E-46 |
| MS.gene052346 | MS.gene08523 | 0.854998 | 8.47E-62 | -1.69E-46 |
| MS.gene052486 | MS.gene08523 | 0.800375 | 1.48E-48 | -1.69E-46 |
| MS.gene052501 | MS.gene08523 | 0.868377 | 6.83E-66 | -1.69E-46 |
| MS.gene052503 | MS.gene08523 | 0.890408 | 1.01E-73 | -1.69E-46 |
| MS.gene052505 | MS.gene08523 | 0.857992 | 1.12E-62 | -1.69E-46 |
| MS.gene052506 | MS.gene08523 | 0.807243 | 5.56E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene08523 | 0.854963 | 8.67E-62 | -1.69E-46 |
| MS.gene052823 | MS.gene08523 | 0.892445 | 1.58E-74 | -1.69E-46 |
| MS.gene052825 | MS.gene08523 | 0.888966 | 3.69E-73 | -1.69E-46 |
| MS.gene052982 | MS.gene08523 | 0.822951 | 1.80E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene08523 | 0.835576 | 1.55E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene08523 | 0.810547 | 1.09E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene08523 | 0.803152 | 4.00E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene08523 | 0.843586 | 1.28E-58 | -1.69E-46 |
| MS.gene053480 | MS.gene08523 | 0.886041 | 4.83E-72 | -1.69E-46 |
| MS.gene053574 | MS.gene08523 | 0.805296 | 1.43E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene08523 | 0.835117 | 2.02E-56 | -1.69E-46 |
| MS.gene053873 | MS.gene08523 | 0.815133 | 1.08E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene08523 | 0.850398 | 1.74E-60 | -1.69E-46 |
| MS.gene054107 | MS.gene08523 | 0.823074 | 1.68E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene08523 | 0.800706 | 1.27E-48 | -1.69E-46 |
| MS.gene054344 | MS.gene08523 | 0.8206 | 6.29E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene08523 | 0.809741 | 1.63E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene08523 | 0.804177 | 2.45E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene08523 | 0.833166 | 6.23E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene08523 | 0.80793 | 3.97E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene08523 | 0.803765 | 2.98E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene08523 | 0.800684 | 1.28E-48 | -1.69E-46 |
| MS.gene055741 | MS.gene08523 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene05589 | MS.gene08523 | 0.836178 | 1.09E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene08523 | 0.807312 | 5.37E-50 | -1.69E-46 |
| MS.gene056040 | MS.gene08523 | 0.802457 | 5.56E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene08523 | 0.822369 | 2.46E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene08523 | 0.829356 | 5.39E-55 | -1.69E-46 |
| MS.gene056514 | MS.gene08523 | 0.818759 | 1.66E-52 | -1.69E-46 |
| MS.gene056610 | MS.gene08523 | 0.803705 | 3.07E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene08523 | 0.840308 | 9.41E-58 | -1.69E-46 |
| MS.gene057048 | MS.gene08523 | 0.821647 | 3.61E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene08523 | 0.802393 | 5.73E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene08523 | 0.82525 | 5.19E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene08523 | 0.810405 | 1.17E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene08523 | 0.818409 | 1.99E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene08523 | 0.803849 | 2.86E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene08523 | 0.810648 | 1.04E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene08523 | 0.813229 | 2.85E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene08523 | 0.81258 | 3.95E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene08523 | 0.811867 | 5.65E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene08523 | 0.848816 | 4.81E-60 | -1.69E-46 |
| MS.gene059023 | MS.gene08523 | 0.848594 | 5.55E-60 | -1.69E-46 |
| MS.gene059303 | MS.gene08523 | 0.882183 | 1.29E-70 | -1.69E-46 |
| MS.gene059718 | MS.gene08523 | 0.808689 | 2.74E-50 | -1.69E-46 |
| MS.gene059756 | MS.gene08523 | 0.819221 | 1.30E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene08523 | 0.816644 | 4.97E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene08523 | 0.821011 | 5.07E-53 | -1.69E-46 |
| MS.gene060485 | MS.gene08523 | 0.963931 | 1.08E-122 | -1.69E-46 |
| MS.gene060778 | MS.gene08523 | 0.828973 | 6.67E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene08523 | 0.841642 | 4.20E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene08523 | 0.805383 | 1.37E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene08523 | 0.81309 | 3.05E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08523.t1 | MTR_8g024380 | 94.987 | 379 | 18 | 1 | 1 | 378 | 383 | 761 | 0.0 | 743 |
| MS.gene08523.t1 | MTR_1g078110 | 81.530 | 379 | 67 | 2 | 1 | 379 | 382 | 757 | 0.0 | 638 |
| MS.gene08523.t1 | MTR_2g049200 | 73.333 | 375 | 97 | 3 | 1 | 375 | 384 | 755 | 0.0 | 568 |
| MS.gene08523.t1 | MTR_8g024390 | 70.822 | 377 | 105 | 3 | 2 | 375 | 383 | 757 | 0.0 | 548 |
| MS.gene08523.t1 | MTR_8g024420 | 69.312 | 378 | 111 | 3 | 1 | 375 | 346 | 721 | 0.0 | 527 |
| MS.gene08523.t1 | MTR_8g024370 | 68.407 | 383 | 108 | 4 | 1 | 375 | 379 | 756 | 1.19e-174 | 505 |
| MS.gene08523.t1 | MTR_7g118080 | 65.963 | 379 | 120 | 6 | 4 | 378 | 385 | 758 | 3.86e-167 | 486 |
| MS.gene08523.t1 | MTR_7g079310 | 45.550 | 382 | 193 | 8 | 4 | 376 | 389 | 764 | 2.05e-105 | 327 |
| MS.gene08523.t1 | MTR_7g079300 | 45.910 | 379 | 194 | 8 | 4 | 376 | 393 | 766 | 2.54e-104 | 324 |
| MS.gene08523.t1 | MTR_1g079120 | 46.842 | 380 | 190 | 7 | 4 | 376 | 387 | 761 | 1.82e-103 | 322 |
| MS.gene08523.t1 | MTR_4g073540 | 44.359 | 390 | 195 | 13 | 3 | 379 | 391 | 771 | 1.31e-87 | 281 |
| MS.gene08523.t1 | MTR_8g022870 | 41.818 | 385 | 200 | 10 | 11 | 379 | 403 | 779 | 1.55e-83 | 270 |
| MS.gene08523.t1 | MTR_8g027660 | 61.538 | 195 | 51 | 1 | 185 | 379 | 80 | 250 | 6.26e-79 | 243 |
| MS.gene08523.t1 | MTR_4g102400 | 40.476 | 378 | 189 | 10 | 3 | 375 | 406 | 752 | 1.54e-77 | 254 |
| MS.gene08523.t1 | MTR_1g102350 | 37.887 | 388 | 215 | 11 | 3 | 378 | 406 | 779 | 3.35e-76 | 251 |
| MS.gene08523.t1 | MTR_7g075900 | 43.312 | 314 | 161 | 7 | 69 | 375 | 468 | 771 | 6.00e-75 | 247 |
| MS.gene08523.t1 | MTR_7g081420 | 40.992 | 383 | 190 | 12 | 12 | 375 | 419 | 784 | 6.25e-74 | 244 |
| MS.gene08523.t1 | MTR_7g081750 | 45.862 | 290 | 146 | 5 | 89 | 375 | 516 | 797 | 6.87e-74 | 245 |
| MS.gene08523.t1 | MTR_5g025010 | 40.214 | 373 | 193 | 12 | 12 | 377 | 370 | 719 | 7.70e-74 | 243 |
| MS.gene08523.t1 | MTR_8g021130 | 40.897 | 379 | 193 | 13 | 12 | 373 | 408 | 772 | 8.89e-74 | 244 |
| MS.gene08523.t1 | MTR_2g042130 | 36.939 | 379 | 221 | 7 | 9 | 379 | 408 | 776 | 9.75e-74 | 244 |
| MS.gene08523.t1 | MTR_5g025010 | 40.214 | 373 | 193 | 12 | 12 | 377 | 402 | 751 | 1.52e-73 | 243 |
| MS.gene08523.t1 | MTR_4g125180 | 42.810 | 306 | 159 | 8 | 76 | 373 | 452 | 749 | 1.77e-73 | 243 |
| MS.gene08523.t1 | MTR_5g044060 | 78.676 | 136 | 29 | 0 | 89 | 224 | 1 | 136 | 1.78e-73 | 226 |
| MS.gene08523.t1 | MTR_7g081580 | 40.314 | 382 | 193 | 12 | 12 | 375 | 419 | 783 | 9.93e-73 | 242 |
| MS.gene08523.t1 | MTR_5g016120 | 41.600 | 375 | 199 | 10 | 11 | 376 | 398 | 761 | 5.58e-72 | 239 |
| MS.gene08523.t1 | MTR_3g102810 | 39.733 | 375 | 210 | 7 | 12 | 376 | 387 | 755 | 1.07e-71 | 238 |
| MS.gene08523.t1 | MTR_7g098630 | 40.209 | 383 | 194 | 11 | 12 | 375 | 394 | 760 | 2.39e-71 | 239 |
| MS.gene08523.t1 | MTR_7g081380 | 45.973 | 298 | 147 | 8 | 83 | 375 | 518 | 806 | 4.70e-71 | 237 |
| MS.gene08523.t1 | MTR_8g072440 | 38.874 | 373 | 196 | 10 | 12 | 377 | 365 | 712 | 1.50e-69 | 232 |
| MS.gene08523.t1 | MTR_8g072440 | 38.874 | 373 | 196 | 10 | 12 | 377 | 407 | 754 | 3.10e-69 | 231 |
| MS.gene08523.t1 | MTR_7g081500 | 41.910 | 377 | 194 | 11 | 12 | 375 | 418 | 782 | 5.16e-69 | 231 |
| MS.gene08523.t1 | MTR_5g011310 | 39.946 | 373 | 194 | 10 | 13 | 375 | 401 | 753 | 1.06e-68 | 230 |
| MS.gene08523.t1 | MTR_4g134320 | 39.529 | 382 | 204 | 12 | 3 | 376 | 404 | 766 | 1.63e-68 | 230 |
| MS.gene08523.t1 | MTR_3g061110 | 39.024 | 369 | 208 | 8 | 12 | 375 | 396 | 752 | 2.83e-68 | 229 |
| MS.gene08523.t1 | MTR_7g481600 | 38.482 | 382 | 200 | 11 | 12 | 375 | 419 | 783 | 5.58e-68 | 229 |
| MS.gene08523.t1 | MTR_4g103430 | 40.314 | 382 | 209 | 10 | 3 | 377 | 401 | 770 | 7.23e-68 | 228 |
| MS.gene08523.t1 | MTR_5g085690 | 40.104 | 384 | 192 | 12 | 12 | 375 | 423 | 788 | 8.16e-68 | 228 |
| MS.gene08523.t1 | MTR_7g098070 | 39.948 | 383 | 201 | 11 | 3 | 376 | 400 | 762 | 1.01e-67 | 228 |
| MS.gene08523.t1 | MTR_0047s0120 | 40.270 | 370 | 205 | 9 | 11 | 373 | 394 | 754 | 1.26e-67 | 227 |
| MS.gene08523.t1 | MTR_4g095360 | 37.736 | 371 | 215 | 8 | 13 | 376 | 394 | 755 | 1.50e-67 | 227 |
| MS.gene08523.t1 | MTR_5g011320 | 38.978 | 372 | 198 | 10 | 13 | 375 | 394 | 745 | 1.95e-67 | 227 |
| MS.gene08523.t1 | MTR_5g055920 | 39.535 | 387 | 201 | 12 | 3 | 375 | 299 | 666 | 2.59e-67 | 225 |
| MS.gene08523.t1 | MTR_5g011340 | 44.231 | 312 | 151 | 8 | 69 | 375 | 457 | 750 | 7.08e-67 | 225 |
| MS.gene08523.t1 | MTR_8g042710 | 36.104 | 385 | 210 | 13 | 9 | 377 | 401 | 765 | 2.04e-66 | 224 |
| MS.gene08523.t1 | MTR_4g103480 | 39.164 | 383 | 208 | 11 | 3 | 375 | 419 | 786 | 2.62e-66 | 224 |
| MS.gene08523.t1 | MTR_3g082200 | 37.852 | 391 | 199 | 15 | 3 | 375 | 267 | 631 | 5.89e-66 | 221 |
| MS.gene08523.t1 | MTR_5g096750 | 41.161 | 379 | 188 | 15 | 9 | 377 | 413 | 766 | 9.18e-66 | 223 |
| MS.gene08523.t1 | MTR_3g082200 | 37.852 | 391 | 199 | 15 | 3 | 375 | 282 | 646 | 9.20e-66 | 220 |
| MS.gene08523.t1 | MTR_5g011190 | 38.360 | 378 | 199 | 11 | 13 | 378 | 401 | 756 | 1.24e-65 | 222 |
| MS.gene08523.t1 | MTR_1g018510 | 38.624 | 378 | 208 | 10 | 12 | 373 | 354 | 723 | 1.87e-65 | 221 |
| MS.gene08523.t1 | MTR_5g011370 | 38.400 | 375 | 197 | 11 | 13 | 375 | 421 | 773 | 2.63e-65 | 221 |
| MS.gene08523.t1 | MTR_3g082200 | 37.852 | 391 | 199 | 15 | 3 | 375 | 405 | 769 | 4.09e-65 | 221 |
| MS.gene08523.t1 | MTR_5g011280 | 38.421 | 380 | 191 | 11 | 13 | 375 | 402 | 755 | 5.48e-65 | 220 |
| MS.gene08523.t1 | MTR_5g011260 | 38.522 | 379 | 197 | 11 | 13 | 378 | 399 | 754 | 6.06e-65 | 220 |
| MS.gene08523.t1 | MTR_4g103450 | 39.164 | 383 | 208 | 11 | 3 | 375 | 376 | 743 | 7.33e-65 | 219 |
| MS.gene08523.t1 | MTR_5g011270 | 39.467 | 375 | 193 | 10 | 13 | 375 | 399 | 751 | 9.61e-65 | 219 |
| MS.gene08523.t1 | MTR_8g042670 | 36.579 | 380 | 208 | 13 | 11 | 377 | 276 | 635 | 1.38e-64 | 217 |
| MS.gene08523.t1 | MTR_8g042670 | 36.579 | 380 | 208 | 13 | 11 | 377 | 400 | 759 | 8.62e-64 | 217 |
| MS.gene08523.t1 | MTR_8g033150 | 37.435 | 382 | 204 | 12 | 3 | 375 | 369 | 724 | 1.66e-63 | 216 |
| MS.gene08523.t1 | MTR_8g033150 | 37.435 | 382 | 204 | 12 | 3 | 375 | 396 | 751 | 2.93e-63 | 216 |
| MS.gene08523.t1 | MTR_4g103495 | 40.214 | 373 | 205 | 9 | 11 | 377 | 265 | 625 | 4.95e-62 | 210 |
| MS.gene08523.t1 | MTR_4g103490 | 38.667 | 375 | 202 | 11 | 12 | 375 | 426 | 783 | 5.03e-61 | 210 |
| MS.gene08523.t1 | MTR_8g083220 | 36.927 | 371 | 208 | 10 | 15 | 379 | 428 | 778 | 5.14e-61 | 210 |
| MS.gene08523.t1 | MTR_1g006990 | 37.662 | 385 | 197 | 13 | 6 | 378 | 384 | 737 | 8.21e-61 | 209 |
| MS.gene08523.t1 | MTR_1g007030 | 37.143 | 385 | 199 | 13 | 6 | 378 | 382 | 735 | 8.87e-61 | 208 |
| MS.gene08523.t1 | MTR_8g027260 | 40.065 | 307 | 167 | 5 | 76 | 378 | 361 | 654 | 2.58e-60 | 206 |
| MS.gene08523.t1 | MTR_4g053630 | 36.074 | 377 | 225 | 9 | 5 | 378 | 292 | 655 | 8.47e-60 | 204 |
| MS.gene08523.t1 | MTR_8g005710 | 38.529 | 340 | 188 | 8 | 46 | 378 | 376 | 701 | 1.50e-59 | 204 |
| MS.gene08523.t1 | MTR_4g053630 | 36.074 | 377 | 225 | 9 | 5 | 378 | 369 | 732 | 2.67e-59 | 204 |
| MS.gene08523.t1 | MTR_4g103400 | 37.533 | 381 | 207 | 12 | 11 | 375 | 411 | 776 | 2.83e-59 | 205 |
| MS.gene08523.t1 | MTR_2g018135 | 38.363 | 391 | 206 | 11 | 2 | 377 | 414 | 784 | 1.92e-58 | 203 |
| MS.gene08523.t1 | MTR_7g034380 | 36.815 | 383 | 207 | 13 | 3 | 377 | 338 | 693 | 3.45e-58 | 201 |
| MS.gene08523.t1 | MTR_8g079900 | 36.267 | 375 | 205 | 10 | 9 | 375 | 295 | 643 | 4.00e-58 | 200 |
| MS.gene08523.t1 | MTR_8g079900 | 36.267 | 375 | 205 | 10 | 9 | 375 | 393 | 741 | 1.16e-57 | 200 |
| MS.gene08523.t1 | MTR_6g055570 | 40.453 | 309 | 160 | 10 | 75 | 375 | 437 | 729 | 1.58e-57 | 199 |
| MS.gene08523.t1 | MTR_1g048110 | 36.623 | 385 | 201 | 14 | 6 | 378 | 380 | 733 | 6.00e-57 | 198 |
| MS.gene08523.t1 | MTR_3g104930 | 37.209 | 387 | 202 | 14 | 11 | 377 | 398 | 763 | 6.54e-57 | 198 |
| MS.gene08523.t1 | MTR_2g018125 | 37.468 | 387 | 208 | 10 | 5 | 377 | 419 | 785 | 2.52e-56 | 197 |
| MS.gene08523.t1 | MTR_8g006680 | 37.240 | 384 | 196 | 17 | 4 | 378 | 378 | 725 | 8.57e-56 | 195 |
| MS.gene08523.t1 | MTR_8g005300 | 37.240 | 384 | 196 | 17 | 4 | 378 | 378 | 725 | 8.57e-56 | 195 |
| MS.gene08523.t1 | MTR_8g005640 | 37.240 | 384 | 196 | 17 | 4 | 378 | 378 | 725 | 8.57e-56 | 195 |
| MS.gene08523.t1 | MTR_6g075370 | 41.544 | 272 | 135 | 8 | 101 | 366 | 424 | 677 | 1.20e-55 | 194 |
| MS.gene08523.t1 | MTR_7g104200 | 39.744 | 312 | 165 | 6 | 69 | 375 | 448 | 741 | 5.42e-55 | 193 |
| MS.gene08523.t1 | MTR_7g075890 | 38.750 | 320 | 169 | 9 | 63 | 375 | 598 | 897 | 9.04e-55 | 194 |
| MS.gene08523.t1 | MTR_3g464790 | 37.637 | 364 | 183 | 14 | 29 | 377 | 399 | 733 | 2.74e-54 | 191 |
| MS.gene08523.t1 | MTR_3g114420 | 39.384 | 292 | 158 | 8 | 94 | 376 | 484 | 765 | 4.64e-54 | 191 |
| MS.gene08523.t1 | MTR_4g053635 | 38.907 | 311 | 172 | 9 | 70 | 378 | 381 | 675 | 2.61e-53 | 187 |
| MS.gene08523.t1 | MTR_3g010080 | 39.677 | 310 | 164 | 11 | 76 | 378 | 441 | 734 | 4.66e-51 | 182 |
| MS.gene08523.t1 | MTR_4g103495 | 40.810 | 321 | 173 | 8 | 11 | 326 | 414 | 722 | 2.16e-50 | 180 |
| MS.gene08523.t1 | MTR_6g055410 | 40.659 | 273 | 140 | 8 | 110 | 375 | 454 | 711 | 4.69e-50 | 179 |
| MS.gene08523.t1 | MTR_2g042650 | 37.755 | 294 | 153 | 9 | 95 | 378 | 372 | 645 | 3.63e-46 | 167 |
| MS.gene08523.t1 | MTR_2g044630 | 37.134 | 307 | 149 | 12 | 79 | 377 | 437 | 707 | 4.49e-43 | 159 |
| MS.gene08523.t1 | MTR_4g127480 | 38.047 | 297 | 142 | 12 | 99 | 374 | 537 | 812 | 6.00e-39 | 148 |
| MS.gene08523.t1 | MTR_7g079295 | 49.669 | 151 | 71 | 3 | 228 | 376 | 363 | 510 | 1.48e-37 | 142 |
| MS.gene08523.t1 | MTR_4g126230 | 38.462 | 208 | 109 | 6 | 101 | 303 | 55 | 248 | 5.87e-37 | 134 |
| MS.gene08523.t1 | MTR_2g042640 | 36.567 | 268 | 129 | 10 | 79 | 337 | 376 | 611 | 6.22e-37 | 141 |
| MS.gene08523.t1 | MTR_3g452290 | 29.639 | 388 | 162 | 14 | 3 | 378 | 283 | 571 | 1.57e-35 | 137 |
| MS.gene08523.t1 | MTR_3g451220 | 29.639 | 388 | 162 | 14 | 3 | 378 | 283 | 571 | 1.57e-35 | 137 |
| MS.gene08523.t1 | MTR_4g132620 | 35.231 | 281 | 158 | 9 | 101 | 370 | 542 | 809 | 1.69e-35 | 138 |
| MS.gene08523.t1 | MTR_8g089230 | 34.932 | 292 | 161 | 11 | 101 | 377 | 570 | 847 | 5.28e-35 | 137 |
| MS.gene08523.t1 | MTR_2g070260 | 38.208 | 212 | 103 | 8 | 161 | 363 | 1 | 193 | 1.47e-34 | 127 |
| MS.gene08523.t1 | MTR_3g114140 | 38.710 | 248 | 134 | 7 | 94 | 333 | 184 | 421 | 1.91e-34 | 132 |
| MS.gene08523.t1 | MTR_2g037850 | 39.662 | 237 | 117 | 7 | 97 | 316 | 530 | 757 | 8.90e-33 | 130 |
| MS.gene08523.t1 | MTR_8g042710 | 37.436 | 195 | 100 | 7 | 9 | 192 | 401 | 584 | 2.57e-29 | 120 |
| MS.gene08523.t1 | MTR_4g053665 | 33.977 | 259 | 125 | 7 | 120 | 378 | 1 | 213 | 6.18e-29 | 112 |
| MS.gene08523.t1 | MTR_7g081660 | 37.569 | 181 | 103 | 4 | 197 | 375 | 380 | 552 | 2.67e-28 | 116 |
| MS.gene08523.t1 | MTR_2g046740 | 32.881 | 295 | 160 | 11 | 101 | 375 | 562 | 838 | 8.40e-28 | 115 |
| MS.gene08523.t1 | MTR_3g114410 | 39.474 | 190 | 106 | 4 | 6 | 192 | 397 | 580 | 1.29e-26 | 111 |
| MS.gene08523.t1 | MTR_4g071560 | 37.297 | 185 | 108 | 6 | 14 | 193 | 339 | 520 | 2.66e-24 | 104 |
| MS.gene08523.t1 | MTR_5g081130 | 36.158 | 177 | 99 | 6 | 204 | 375 | 5 | 172 | 2.11e-22 | 94.4 |
| MS.gene08523.t1 | MTR_5g011300 | 51.087 | 92 | 43 | 1 | 161 | 252 | 1 | 90 | 7.88e-19 | 81.3 |
| MS.gene08523.t1 | MTR_4g118440 | 28.968 | 252 | 121 | 11 | 119 | 365 | 1 | 199 | 3.33e-16 | 77.4 |
| MS.gene08523.t1 | MTR_3g114400 | 31.977 | 172 | 88 | 6 | 213 | 376 | 13 | 163 | 6.61e-15 | 72.4 |
| MS.gene08523.t1 | MTR_3g005755 | 50.685 | 73 | 30 | 3 | 152 | 221 | 237 | 306 | 9.65e-14 | 71.6 |
| MS.gene08523.t1 | MTR_8g027670 | 51.250 | 80 | 39 | 0 | 249 | 328 | 33 | 112 | 1.16e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08523.t1 | AT5G67090 | 43.251 | 363 | 172 | 8 | 9 | 364 | 380 | 715 | 7.02e-85 | 273 |
| MS.gene08523.t1 | AT4G34980 | 40.206 | 388 | 215 | 11 | 3 | 379 | 381 | 762 | 4.05e-81 | 263 |
| MS.gene08523.t1 | AT3G14240 | 40.365 | 384 | 205 | 9 | 13 | 379 | 397 | 773 | 2.13e-76 | 251 |
| MS.gene08523.t1 | AT2G05920 | 37.228 | 368 | 214 | 7 | 13 | 373 | 390 | 747 | 1.28e-75 | 249 |
| MS.gene08523.t1 | AT5G67360 | 40.374 | 374 | 203 | 8 | 11 | 376 | 394 | 755 | 3.30e-75 | 248 |
| MS.gene08523.t1 | AT5G51750 | 37.958 | 382 | 219 | 9 | 5 | 378 | 406 | 777 | 4.17e-74 | 245 |
| MS.gene08523.t1 | AT1G04110 | 38.220 | 382 | 208 | 10 | 11 | 377 | 404 | 772 | 1.01e-72 | 241 |
| MS.gene08523.t1 | AT1G20160 | 39.433 | 388 | 204 | 13 | 4 | 376 | 352 | 723 | 6.28e-69 | 230 |
| MS.gene08523.t1 | AT1G20160 | 39.691 | 388 | 203 | 13 | 4 | 376 | 391 | 762 | 1.01e-68 | 231 |
| MS.gene08523.t1 | AT2G04160 | 38.802 | 384 | 192 | 13 | 12 | 377 | 414 | 772 | 6.68e-68 | 228 |
| MS.gene08523.t1 | AT3G14067 | 37.037 | 378 | 214 | 10 | 13 | 375 | 399 | 767 | 2.13e-66 | 224 |
| MS.gene08523.t1 | AT1G01900 | 44.966 | 298 | 153 | 6 | 85 | 375 | 478 | 771 | 3.37e-64 | 218 |
| MS.gene08523.t1 | AT5G59810 | 37.795 | 381 | 200 | 10 | 11 | 377 | 419 | 776 | 2.24e-61 | 211 |
| MS.gene08523.t1 | AT4G00230 | 36.508 | 378 | 201 | 11 | 9 | 375 | 394 | 743 | 6.36e-61 | 209 |
| MS.gene08523.t1 | AT4G26330 | 41.049 | 324 | 171 | 9 | 61 | 375 | 409 | 721 | 9.54e-61 | 208 |
| MS.gene08523.t1 | AT4G26330 | 41.049 | 324 | 171 | 9 | 61 | 375 | 423 | 735 | 1.14e-60 | 208 |
| MS.gene08523.t1 | AT1G20150 | 38.243 | 387 | 194 | 12 | 13 | 375 | 405 | 770 | 2.08e-59 | 205 |
| MS.gene08523.t1 | AT5G45650 | 40.187 | 321 | 170 | 8 | 64 | 377 | 485 | 790 | 7.05e-57 | 199 |
| MS.gene08523.t1 | AT5G45650 | 40.187 | 321 | 170 | 8 | 64 | 377 | 485 | 790 | 7.05e-57 | 199 |
| MS.gene08523.t1 | AT1G32970 | 36.745 | 381 | 216 | 9 | 2 | 375 | 360 | 722 | 1.52e-56 | 197 |
| MS.gene08523.t1 | AT4G10540 | 38.218 | 348 | 193 | 8 | 32 | 375 | 434 | 763 | 4.01e-56 | 196 |
| MS.gene08523.t1 | AT3G46850 | 36.675 | 379 | 210 | 11 | 2 | 375 | 381 | 734 | 3.92e-55 | 193 |
| MS.gene08523.t1 | AT4G10550 | 40.062 | 322 | 171 | 9 | 57 | 375 | 408 | 710 | 4.79e-55 | 192 |
| MS.gene08523.t1 | AT4G10550 | 40.062 | 322 | 171 | 9 | 57 | 375 | 408 | 710 | 4.79e-55 | 192 |
| MS.gene08523.t1 | AT4G10550 | 40.062 | 322 | 171 | 9 | 57 | 375 | 464 | 766 | 6.29e-55 | 193 |
| MS.gene08523.t1 | AT4G10550 | 40.062 | 322 | 171 | 9 | 57 | 375 | 480 | 782 | 8.60e-55 | 193 |
| MS.gene08523.t1 | AT5G03620 | 37.383 | 321 | 170 | 7 | 68 | 375 | 456 | 758 | 2.22e-54 | 191 |
| MS.gene08523.t1 | AT5G11940 | 39.812 | 319 | 169 | 10 | 62 | 375 | 452 | 752 | 3.07e-54 | 191 |
| MS.gene08523.t1 | AT5G58830 | 37.705 | 366 | 188 | 13 | 33 | 377 | 361 | 707 | 3.40e-54 | 190 |
| MS.gene08523.t1 | AT3G46840 | 36.267 | 375 | 198 | 12 | 11 | 375 | 391 | 734 | 5.53e-54 | 190 |
| MS.gene08523.t1 | AT5G58840 | 37.027 | 370 | 194 | 14 | 13 | 375 | 369 | 706 | 1.29e-53 | 189 |
| MS.gene08523.t1 | AT4G10520 | 38.166 | 338 | 188 | 7 | 41 | 375 | 425 | 744 | 1.92e-53 | 189 |
| MS.gene08523.t1 | AT4G10510 | 34.987 | 383 | 221 | 10 | 2 | 375 | 331 | 694 | 3.66e-53 | 187 |
| MS.gene08523.t1 | AT4G10510 | 34.987 | 383 | 221 | 10 | 2 | 375 | 346 | 709 | 4.22e-53 | 187 |
| MS.gene08523.t1 | AT4G10510 | 34.987 | 383 | 221 | 10 | 2 | 375 | 390 | 753 | 5.19e-53 | 187 |
| MS.gene08523.t1 | AT4G10510 | 34.987 | 383 | 221 | 10 | 2 | 375 | 402 | 765 | 7.04e-53 | 187 |
| MS.gene08523.t1 | AT5G59100 | 35.176 | 398 | 192 | 14 | 3 | 375 | 381 | 737 | 3.03e-52 | 185 |
| MS.gene08523.t1 | AT1G32960 | 36.815 | 383 | 214 | 13 | 2 | 375 | 402 | 765 | 4.59e-52 | 185 |
| MS.gene08523.t1 | AT5G59090 | 34.840 | 376 | 208 | 12 | 12 | 378 | 384 | 731 | 1.72e-51 | 183 |
| MS.gene08523.t1 | AT5G59090 | 34.840 | 376 | 208 | 12 | 12 | 378 | 382 | 729 | 2.31e-51 | 183 |
| MS.gene08523.t1 | AT5G59090 | 34.574 | 376 | 204 | 12 | 12 | 378 | 384 | 726 | 2.53e-51 | 182 |
| MS.gene08523.t1 | AT5G58820 | 36.986 | 365 | 187 | 12 | 33 | 375 | 357 | 700 | 7.08e-51 | 181 |
| MS.gene08523.t1 | AT5G59120 | 34.031 | 382 | 218 | 13 | 2 | 375 | 372 | 727 | 9.47e-50 | 178 |
| MS.gene08523.t1 | AT5G59190 | 36.314 | 369 | 201 | 13 | 13 | 374 | 346 | 687 | 2.64e-49 | 177 |
| MS.gene08523.t1 | AT4G21640 | 37.152 | 323 | 181 | 11 | 56 | 375 | 424 | 727 | 2.25e-48 | 174 |
| MS.gene08523.t1 | AT1G66210 | 36.188 | 362 | 193 | 11 | 28 | 375 | 413 | 750 | 2.32e-48 | 175 |
| MS.gene08523.t1 | AT5G59130 | 35.989 | 364 | 190 | 13 | 35 | 375 | 382 | 725 | 2.68e-48 | 174 |
| MS.gene08523.t1 | AT5G59130 | 35.989 | 364 | 190 | 13 | 35 | 375 | 343 | 686 | 2.70e-48 | 174 |
| MS.gene08523.t1 | AT5G59130 | 35.989 | 364 | 190 | 13 | 35 | 375 | 378 | 721 | 2.78e-48 | 174 |
| MS.gene08523.t1 | AT4G21326 | 38.871 | 319 | 174 | 6 | 62 | 377 | 389 | 689 | 3.05e-48 | 174 |
| MS.gene08523.t1 | AT4G21630 | 36.842 | 323 | 182 | 10 | 57 | 375 | 449 | 753 | 8.48e-48 | 173 |
| MS.gene08523.t1 | AT1G32940 | 35.844 | 385 | 215 | 12 | 2 | 375 | 348 | 711 | 9.14e-48 | 172 |
| MS.gene08523.t1 | AT1G32940 | 35.844 | 385 | 215 | 12 | 2 | 375 | 348 | 711 | 9.14e-48 | 172 |
| MS.gene08523.t1 | AT1G66220 | 31.806 | 371 | 223 | 8 | 9 | 375 | 400 | 744 | 1.05e-47 | 173 |
| MS.gene08523.t1 | AT1G32950 | 35.509 | 383 | 219 | 13 | 2 | 375 | 347 | 710 | 1.15e-47 | 172 |
| MS.gene08523.t1 | AT1G32950 | 35.509 | 383 | 219 | 13 | 2 | 375 | 398 | 761 | 1.33e-47 | 172 |
| MS.gene08523.t1 | AT1G32940 | 35.844 | 385 | 215 | 12 | 2 | 375 | 399 | 762 | 1.49e-47 | 172 |
| MS.gene08523.t1 | AT4G21323 | 36.677 | 319 | 180 | 6 | 59 | 373 | 491 | 791 | 2.46e-47 | 172 |
| MS.gene08523.t1 | AT5G59130 | 36.544 | 353 | 193 | 12 | 35 | 375 | 382 | 715 | 2.48e-47 | 171 |
| MS.gene08523.t1 | AT2G39850 | 35.503 | 338 | 177 | 13 | 60 | 375 | 447 | 765 | 1.36e-45 | 167 |
| MS.gene08523.t1 | AT4G21650 | 35.294 | 323 | 187 | 9 | 57 | 375 | 456 | 760 | 4.24e-45 | 166 |
| MS.gene08523.t1 | AT5G45640 | 36.644 | 292 | 154 | 8 | 94 | 378 | 487 | 754 | 9.57e-44 | 162 |
| MS.gene08523.t1 | AT4G10530 | 34.018 | 341 | 191 | 7 | 38 | 375 | 426 | 735 | 1.69e-43 | 161 |
| MS.gene08523.t1 | AT4G15040 | 33.511 | 376 | 210 | 11 | 10 | 375 | 340 | 685 | 7.14e-43 | 159 |
| MS.gene08523.t1 | AT4G15040 | 33.511 | 376 | 210 | 11 | 10 | 375 | 340 | 685 | 7.14e-43 | 159 |
| MS.gene08523.t1 | AT1G32980 | 45.550 | 191 | 94 | 4 | 157 | 344 | 3 | 186 | 5.94e-41 | 143 |
| MS.gene08523.t1 | AT2G19170 | 38.276 | 290 | 152 | 12 | 99 | 374 | 533 | 809 | 9.78e-39 | 147 |
| MS.gene08523.t1 | AT2G19170 | 38.276 | 290 | 152 | 12 | 99 | 374 | 533 | 809 | 9.78e-39 | 147 |
| MS.gene08523.t1 | AT4G30020 | 37.241 | 290 | 155 | 11 | 99 | 374 | 534 | 810 | 1.66e-37 | 144 |
| MS.gene08523.t1 | AT4G30020 | 37.241 | 290 | 155 | 11 | 99 | 374 | 534 | 810 | 1.66e-37 | 144 |
| MS.gene08523.t1 | AT4G30020 | 37.241 | 290 | 155 | 11 | 99 | 374 | 534 | 810 | 1.66e-37 | 144 |
| MS.gene08523.t1 | AT4G30020 | 37.241 | 290 | 155 | 11 | 99 | 374 | 534 | 810 | 1.66e-37 | 144 |
| MS.gene08523.t1 | AT4G20430 | 35.274 | 292 | 160 | 12 | 101 | 377 | 549 | 826 | 6.37e-35 | 136 |
| MS.gene08523.t1 | AT4G20430 | 35.274 | 292 | 160 | 12 | 101 | 377 | 573 | 850 | 7.24e-35 | 136 |
| MS.gene08523.t1 | AT4G20430 | 35.274 | 292 | 160 | 12 | 101 | 377 | 573 | 850 | 7.24e-35 | 136 |
| MS.gene08523.t1 | AT1G62340 | 36.271 | 295 | 159 | 12 | 94 | 375 | 551 | 829 | 1.96e-34 | 135 |
| MS.gene08523.t1 | AT1G30600 | 30.144 | 418 | 231 | 17 | 1 | 375 | 427 | 826 | 4.01e-33 | 131 |
| MS.gene08523.t1 | AT5G44530 | 34.138 | 290 | 162 | 11 | 101 | 375 | 558 | 833 | 3.20e-32 | 129 |
| MS.gene08523.t1 | AT5G44530 | 32.063 | 315 | 160 | 12 | 101 | 375 | 558 | 858 | 4.96e-29 | 119 |
| MS.gene08523.t1 | AT4G00230 | 40.625 | 192 | 93 | 6 | 9 | 194 | 394 | 570 | 9.67e-29 | 118 |
| MS.gene08523.t1 | AT5G58840 | 38.798 | 183 | 89 | 8 | 13 | 192 | 369 | 531 | 1.46e-24 | 105 |
| MS.gene08523.t1 | AT5G03620 | 46.457 | 127 | 63 | 1 | 68 | 194 | 456 | 577 | 1.82e-22 | 99.4 |
| MS.gene08523.t1 | AT5G59110 | 35.976 | 164 | 97 | 4 | 219 | 377 | 8 | 168 | 1.44e-20 | 88.2 |
| MS.gene08523.t1 | AT1G32940 | 35.349 | 215 | 119 | 8 | 2 | 208 | 399 | 601 | 1.47e-17 | 84.7 |
Find 70 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTGCTCTGAACCTTCTT+TGG | 0.224917 | 8.3:-68062222 | MS.gene08523:CDS |
| TTTATTGCATATTTCAATAA+TGG | 0.246626 | 8.3:-68062182 | MS.gene08523:CDS |
| CCAGGGTCAAGTGCTCTATT+TGG | 0.248129 | 8.3:+68062344 | None:intergenic |
| AAAATGAAGAAAGTGGCTTT+TGG | 0.302465 | 8.3:-68061966 | MS.gene08523:CDS |
| TTGAATGAAGCAAAAGTTCT+TGG | 0.310268 | 8.3:-68062914 | MS.gene08523:CDS |
| TTGACTGCTTCTCCATTGAT+TGG | 0.328555 | 8.3:+68062821 | None:intergenic |
| TCAGTGAATACCAACTTGTT+TGG | 0.336055 | 8.3:+68062041 | None:intergenic |
| CAGTGAATACCAACTTGTTT+GGG | 0.345539 | 8.3:+68062042 | None:intergenic |
| AAATGTTCCTGTGATGGATT+TGG | 0.347365 | 8.3:-68062606 | MS.gene08523:CDS |
| TTTGATAAGTGGAACATCTA+TGG | 0.353717 | 8.3:-68062555 | MS.gene08523:CDS |
| TGAAAGGAGCACACGGTGAT+TGG | 0.356416 | 8.3:-68062499 | MS.gene08523:CDS |
| TGAATGAAGCAAAAGTTCTT+GGG | 0.362762 | 8.3:-68062913 | MS.gene08523:CDS |
| AATGTTCCTGTGATGGATTT+GGG | 0.372980 | 8.3:-68062605 | MS.gene08523:CDS |
| TAACTGTTCTATGAAATTCT+TGG | 0.374058 | 8.3:+68062138 | None:intergenic |
| ATAATGGAAATTCTTCTTCA+AGG | 0.380641 | 8.3:-68062166 | MS.gene08523:CDS |
| AACAAGTTCAATTTGATAAG+TGG | 0.388291 | 8.3:-68062566 | MS.gene08523:CDS |
| ATGGCATGTCCTCATGTTGC+AGG | 0.395406 | 8.3:-68062536 | MS.gene08523:CDS |
| AACTGTTCTATGAAATTCTT+GGG | 0.410693 | 8.3:+68062139 | None:intergenic |
| TTGAAATATGCAATAAAAGA+AGG | 0.421126 | 8.3:+68062188 | None:intergenic |
| TCGAGTATTGCGACCACGAT+TGG | 0.427269 | 8.3:+68061903 | None:intergenic |
| GGGTTTATGTGACAATGTTA+AGG | 0.427670 | 8.3:-68063014 | MS.gene08523:CDS |
| TCTAGCATTACTCAGGTTGA+AGG | 0.431224 | 8.3:-68062083 | MS.gene08523:CDS |
| ATTGGAGCCCTGCCGCGATT+CGG | 0.433464 | 8.3:-68062481 | MS.gene08523:CDS |
| ATGTCAGGTTTCAAAACATA+TGG | 0.439469 | 8.3:+68062668 | None:intergenic |
| ATCATTGTTGATCCAATCAA+TGG | 0.454770 | 8.3:-68062833 | MS.gene08523:CDS |
| CATAGAACAGTTACCAATGT+TGG | 0.459195 | 8.3:-68062128 | MS.gene08523:CDS |
| GTACCAGGAGCAGTGATGTC+AGG | 0.480347 | 8.3:+68062653 | None:intergenic |
| ATTGCCGACCGAATCGCGGC+AGG | 0.480666 | 8.3:+68062473 | None:intergenic |
| CCTGGTCTTATTTACGATGT+TGG | 0.495175 | 8.3:-68062326 | MS.gene08523:CDS |
| TCCATCACAGGAACATTTGT+GGG | 0.503984 | 8.3:+68062611 | None:intergenic |
| TGACCAGCTCCCAATGCAAA+AGG | 0.509119 | 8.3:+68062374 | None:intergenic |
| ATCCATCACAGGAACATTTG+TGG | 0.515639 | 8.3:+68062610 | None:intergenic |
| AAACCTGACATCACTGCTCC+TGG | 0.518027 | 8.3:-68062656 | MS.gene08523:CDS |
| AAGGAGCATATTAAAGACAT+TGG | 0.525407 | 8.3:-68062419 | MS.gene08523:CDS |
| TGTTTCTCCCTCACCAACAT+TGG | 0.525851 | 8.3:+68062115 | None:intergenic |
| TGAAATATGCAATAAAAGAA+GGG | 0.526670 | 8.3:+68062189 | None:intergenic |
| ACATATGGACAGCTATTTGA+AGG | 0.529731 | 8.3:+68062683 | None:intergenic |
| ATTGATTGGATCAACAATGA+TGG | 0.534175 | 8.3:+68062835 | None:intergenic |
| TTATGTTTCTAGCATTACTC+AGG | 0.537982 | 8.3:-68062090 | MS.gene08523:CDS |
| CAGTGTTATCCCAAACAAGT+TGG | 0.541444 | 8.3:-68062051 | MS.gene08523:CDS |
| GGACATATTTGATAATACTA+AGG | 0.543524 | 8.3:-68062438 | MS.gene08523:CDS |
| TAAGAAGAAACACTAGGTGC+TGG | 0.550269 | 8.3:+68062719 | None:intergenic |
| CTAGCATTACTCAGGTTGAA+GGG | 0.551958 | 8.3:-68062082 | MS.gene08523:CDS |
| GAGCCCTGCCGCGATTCGGT+CGG | 0.560337 | 8.3:-68062477 | MS.gene08523:CDS |
| GAATGAAGCAAAAGTTCTTG+GGG | 0.564155 | 8.3:-68062912 | MS.gene08523:CDS |
| TCCTCATGTTGCAGGTGTCG+CGG | 0.564392 | 8.3:-68062528 | MS.gene08523:CDS |
| AGAAACTAAGCTACAAGTTG+AGG | 0.565728 | 8.3:-68062010 | MS.gene08523:CDS |
| AACAGTTACCAATGTTGGTG+AGG | 0.572151 | 8.3:-68062123 | MS.gene08523:CDS |
| CCAACATCGTAAATAAGACC+AGG | 0.572452 | 8.3:+68062326 | None:intergenic |
| GTTTCTTCTTATAGTTCAAG+AGG | 0.574131 | 8.3:-68062707 | MS.gene08523:CDS |
| GGGTAGTTAAGATCCAAAGA+AGG | 0.586445 | 8.3:+68062209 | None:intergenic |
| GCCCACAAATGTTCCTGTGA+TGG | 0.589065 | 8.3:-68062612 | MS.gene08523:CDS |
| TGATTCCCCAAATCCATCAC+AGG | 0.589870 | 8.3:+68062599 | None:intergenic |
| TTGCCGACCGAATCGCGGCA+GGG | 0.595732 | 8.3:+68062474 | None:intergenic |
| ACAGTTACCAATGTTGGTGA+GGG | 0.598993 | 8.3:-68062122 | MS.gene08523:CDS |
| GTACAAATATCTTAGCTGCA+TGG | 0.601561 | 8.3:-68062634 | MS.gene08523:CDS |
| TTTCTTCTTATAGTTCAAGA+GGG | 0.602199 | 8.3:-68062706 | MS.gene08523:CDS |
| CCAAATAGAGCACTTGACCC+TGG | 0.619594 | 8.3:-68062344 | MS.gene08523:CDS |
| GCCGCGACACCTGCAACATG+AGG | 0.619878 | 8.3:+68062527 | None:intergenic |
| ATTCGAAGAAGATCTTGTGA+TGG | 0.644214 | 8.3:+68062244 | None:intergenic |
| CATAATTGCCGACCGAATCG+CGG | 0.646114 | 8.3:+68062469 | None:intergenic |
| GCAGCTAAGATATTTGTACC+AGG | 0.652313 | 8.3:+68062638 | None:intergenic |
| ATGTTCCTGTGATGGATTTG+GGG | 0.657697 | 8.3:-68062604 | MS.gene08523:CDS |
| GAACTATAAGAAGAAACACT+AGG | 0.659947 | 8.3:+68062713 | None:intergenic |
| GATTGTTGTGTGTGAAGACA+AGG | 0.667481 | 8.3:-68062969 | MS.gene08523:CDS |
| TGTTTGGGATAACACTGACA+CGG | 0.670435 | 8.3:+68062057 | None:intergenic |
| TGTGGTTAGAAGTCCAATCG+TGG | 0.714853 | 8.3:-68061916 | MS.gene08523:CDS |
| GTCGGCAATTATGACAACGT+CGG | 0.719253 | 8.3:-68062459 | MS.gene08523:CDS |
| CAACATCGTAAATAAGACCA+GGG | 0.729565 | 8.3:+68062327 | None:intergenic |
| TTGGATGGATATGAAGCATG+TGG | 0.729881 | 8.3:-68061934 | MS.gene08523:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTGCATATTTCAATAA+TGG | - | chr8.3:68062733-68062752 | MS.gene08523:CDS | 15.0% |
| !! | TGAAATATGCAATAAAAGAA+GGG | + | chr8.3:68062729-68062748 | None:intergenic | 20.0% |
| !! | TTGAAATATGCAATAAAAGA+AGG | + | chr8.3:68062730-68062749 | None:intergenic | 20.0% |
| !!! | AATTATCGACTTGATAAAAA+AGG | + | chr8.3:68061982-68062001 | None:intergenic | 20.0% |
| ! | AACAAGTTCAATTTGATAAG+TGG | - | chr8.3:68062349-68062368 | MS.gene08523:CDS | 25.0% |
| ! | AACTGTTCTATGAAATTCTT+GGG | + | chr8.3:68062779-68062798 | None:intergenic | 25.0% |
| ! | TAACTGTTCTATGAAATTCT+TGG | + | chr8.3:68062780-68062799 | None:intergenic | 25.0% |
| ! | TTTCTTCTTATAGTTCAAGA+GGG | - | chr8.3:68062209-68062228 | MS.gene08523:CDS | 25.0% |
| !! | ATAATGGAAATTCTTCTTCA+AGG | - | chr8.3:68062749-68062768 | MS.gene08523:CDS | 25.0% |
| !! | GGACATATTTGATAATACTA+AGG | - | chr8.3:68062477-68062496 | MS.gene08523:CDS | 25.0% |
| !! | TCTTTCATGAAAACAGTTTT+TGG | - | chr8.3:68062166-68062185 | MS.gene08523:CDS | 25.0% |
| AACGACAAAAATGAAGAAAG+TGG | - | chr8.3:68062942-68062961 | MS.gene08523:CDS | 30.0% | |
| ATCATTGTTGATCCAATCAA+TGG | - | chr8.3:68062082-68062101 | MS.gene08523:CDS | 30.0% | |
| ATGTCAGGTTTCAAAACATA+TGG | + | chr8.3:68062250-68062269 | None:intergenic | 30.0% | |
| ATTGATTGGATCAACAATGA+TGG | + | chr8.3:68062083-68062102 | None:intergenic | 30.0% | |
| GAACTATAAGAAGAAACACT+AGG | + | chr8.3:68062205-68062224 | None:intergenic | 30.0% | |
| GTTTCTTCTTATAGTTCAAG+AGG | - | chr8.3:68062208-68062227 | MS.gene08523:CDS | 30.0% | |
| TGAATGAAGCAAAAGTTCTT+GGG | - | chr8.3:68062002-68062021 | MS.gene08523:CDS | 30.0% | |
| TTGAATGAAGCAAAAGTTCT+TGG | - | chr8.3:68062001-68062020 | MS.gene08523:CDS | 30.0% | |
| TTTGATAAGTGGAACATCTA+TGG | - | chr8.3:68062360-68062379 | MS.gene08523:CDS | 30.0% | |
| ! | AAAATGAAGAAAGTGGCTTT+TGG | - | chr8.3:68062949-68062968 | MS.gene08523:CDS | 30.0% |
| ! | AAATGAAGAAAGTGGCTTTT+GGG | - | chr8.3:68062950-68062969 | MS.gene08523:CDS | 30.0% |
| ! | AAGGAGCATATTAAAGACAT+TGG | - | chr8.3:68062496-68062515 | MS.gene08523:CDS | 30.0% |
| !! | TTATGTTTCTAGCATTACTC+AGG | - | chr8.3:68062825-68062844 | MS.gene08523:CDS | 30.0% |
| ACATATGGACAGCTATTTGA+AGG | + | chr8.3:68062235-68062254 | None:intergenic | 35.0% | |
| AGAAACTAAGCTACAAGTTG+AGG | - | chr8.3:68062905-68062924 | MS.gene08523:CDS | 35.0% | |
| ATTCGAAGAAGATCTTGTGA+TGG | + | chr8.3:68062674-68062693 | None:intergenic | 35.0% | |
| CAACATCGTAAATAAGACCA+GGG | + | chr8.3:68062591-68062610 | None:intergenic | 35.0% | |
| CATAGAACAGTTACCAATGT+TGG | - | chr8.3:68062787-68062806 | MS.gene08523:CDS | 35.0% | |
| GAATGAAGCAAAAGTTCTTG+GGG | - | chr8.3:68062003-68062022 | MS.gene08523:CDS | 35.0% | |
| GGGTTTATGTGACAATGTTA+AGG | - | chr8.3:68061901-68061920 | MS.gene08523:CDS | 35.0% | |
| GTACAAATATCTTAGCTGCA+TGG | - | chr8.3:68062281-68062300 | MS.gene08523:CDS | 35.0% | |
| ! | CAGTGAATACCAACTTGTTT+GGG | + | chr8.3:68062876-68062895 | None:intergenic | 35.0% |
| ! | TCAGTGAATACCAACTTGTT+TGG | + | chr8.3:68062877-68062896 | None:intergenic | 35.0% |
| !! | AAATGTTCCTGTGATGGATT+TGG | - | chr8.3:68062309-68062328 | MS.gene08523:CDS | 35.0% |
| !! | AATGTTCCTGTGATGGATTT+GGG | - | chr8.3:68062310-68062329 | MS.gene08523:CDS | 35.0% |
| !! | TTTTGGGTATCTAACTTGGA+TGG | - | chr8.3:68062966-68062985 | MS.gene08523:CDS | 35.0% |
| AACAGTTACCAATGTTGGTG+AGG | - | chr8.3:68062792-68062811 | MS.gene08523:CDS | 40.0% | |
| ATCCATCACAGGAACATTTG+TGG | + | chr8.3:68062308-68062327 | None:intergenic | 40.0% | |
| CAGTGTTATCCCAAACAAGT+TGG | - | chr8.3:68062864-68062883 | MS.gene08523:CDS | 40.0% | |
| CCAACATCGTAAATAAGACC+AGG | + | chr8.3:68062592-68062611 | None:intergenic | 40.0% | |
| GATTGTTGTGTGTGAAGACA+AGG | - | chr8.3:68061946-68061965 | MS.gene08523:CDS | 40.0% | |
| GCAGCTAAGATATTTGTACC+AGG | + | chr8.3:68062280-68062299 | None:intergenic | 40.0% | |
| GGGTAGTTAAGATCCAAAGA+AGG | + | chr8.3:68062709-68062728 | None:intergenic | 40.0% | |
| TAAGAAGAAACACTAGGTGC+TGG | + | chr8.3:68062199-68062218 | None:intergenic | 40.0% | |
| TCCATCACAGGAACATTTGT+GGG | + | chr8.3:68062307-68062326 | None:intergenic | 40.0% | |
| TTGACTGCTTCTCCATTGAT+TGG | + | chr8.3:68062097-68062116 | None:intergenic | 40.0% | |
| TTGGATGGATATGAAGCATG+TGG | - | chr8.3:68062981-68063000 | MS.gene08523:CDS | 40.0% | |
| ! | ACAGTTACCAATGTTGGTGA+GGG | - | chr8.3:68062793-68062812 | MS.gene08523:CDS | 40.0% |
| ! | TGATTGCTCTGAACCTTCTT+TGG | - | chr8.3:68062693-68062712 | MS.gene08523:CDS | 40.0% |
| ! | TGTTTGGGATAACACTGACA+CGG | + | chr8.3:68062861-68062880 | None:intergenic | 40.0% |
| !! | ATGTTCCTGTGATGGATTTG+GGG | - | chr8.3:68062311-68062330 | MS.gene08523:CDS | 40.0% |
| !! | CCTGGTCTTATTTACGATGT+TGG | - | chr8.3:68062589-68062608 | MS.gene08523:CDS | 40.0% |
| !! | CTAGCATTACTCAGGTTGAA+GGG | - | chr8.3:68062833-68062852 | MS.gene08523:CDS | 40.0% |
| !! | TCTAGCATTACTCAGGTTGA+AGG | - | chr8.3:68062832-68062851 | MS.gene08523:CDS | 40.0% |
| !! | TGGCTTTTGGGTATCTAACT+TGG | - | chr8.3:68062962-68062981 | MS.gene08523:CDS | 40.0% |
| GTCGGCAATTATGACAACGT+CGG | - | chr8.3:68062456-68062475 | MS.gene08523:CDS | 45.0% | |
| TGATTCCCCAAATCCATCAC+AGG | + | chr8.3:68062319-68062338 | None:intergenic | 45.0% | |
| TGTGGTTAGAAGTCCAATCG+TGG | - | chr8.3:68062999-68063018 | MS.gene08523:CDS | 45.0% | |
| TGTTTCTCCCTCACCAACAT+TGG | + | chr8.3:68062803-68062822 | None:intergenic | 45.0% | |
| ! | AGCAGCAACTCCTTTTGCAT+TGG | - | chr8.3:68062531-68062550 | MS.gene08523:CDS | 45.0% |
| ! | GCAGCAACTCCTTTTGCATT+GGG | - | chr8.3:68062532-68062551 | MS.gene08523:CDS | 45.0% |
| !! | GCACTTTTGAAAGGAGCACA+CGG | - | chr8.3:68062409-68062428 | MS.gene08523:CDS | 45.0% |
| AAACCTGACATCACTGCTCC+TGG | - | chr8.3:68062259-68062278 | MS.gene08523:CDS | 50.0% | |
| ATGGCATGTCCTCATGTTGC+AGG | - | chr8.3:68062379-68062398 | MS.gene08523:CDS | 50.0% | |
| CATAATTGCCGACCGAATCG+CGG | + | chr8.3:68062449-68062468 | None:intergenic | 50.0% | |
| CCAGGGTCAAGTGCTCTATT+TGG | + | chr8.3:68062574-68062593 | None:intergenic | 50.0% | |
| GCCCACAAATGTTCCTGTGA+TGG | - | chr8.3:68062303-68062322 | MS.gene08523:CDS | 50.0% | |
| TGACCAGCTCCCAATGCAAA+AGG | + | chr8.3:68062544-68062563 | None:intergenic | 50.0% | |
| ! | ACTCCTTTTGCATTGGGAGC+TGG | - | chr8.3:68062538-68062557 | MS.gene08523:CDS | 50.0% |
| ! | CCAAATAGAGCACTTGACCC+TGG | - | chr8.3:68062571-68062590 | MS.gene08523:CDS | 50.0% |
| ! | TCGAGTATTGCGACCACGAT+TGG | + | chr8.3:68063015-68063034 | None:intergenic | 50.0% |
| ! | TGAAAGGAGCACACGGTGAT+TGG | - | chr8.3:68062416-68062435 | MS.gene08523:CDS | 50.0% |
| GTACCAGGAGCAGTGATGTC+AGG | + | chr8.3:68062265-68062284 | None:intergenic | 55.0% | |
| ! | TCCTCATGTTGCAGGTGTCG+CGG | - | chr8.3:68062387-68062406 | MS.gene08523:CDS | 55.0% |
| !! | GGTGTCGCGGCACTTTTGAA+AGG | - | chr8.3:68062400-68062419 | MS.gene08523:CDS | 55.0% |
| ATTGGAGCCCTGCCGCGATT+CGG | - | chr8.3:68062434-68062453 | MS.gene08523:CDS | 60.0% | |
| ATTGCCGACCGAATCGCGGC+AGG | + | chr8.3:68062445-68062464 | None:intergenic | 65.0% | |
| GCCGCGACACCTGCAACATG+AGG | + | chr8.3:68062391-68062410 | None:intergenic | 65.0% | |
| TTGCCGACCGAATCGCGGCA+GGG | + | chr8.3:68062444-68062463 | None:intergenic | 65.0% | |
| !! | GAGCCCTGCCGCGATTCGGT+CGG | - | chr8.3:68062438-68062457 | MS.gene08523:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 68061899 | 68063038 | 68061899 | ID=MS.gene08523 |
| chr8.3 | mRNA | 68061899 | 68063038 | 68061899 | ID=MS.gene08523.t1;Parent=MS.gene08523 |
| chr8.3 | exon | 68061899 | 68063038 | 68061899 | ID=MS.gene08523.t1.exon1;Parent=MS.gene08523.t1 |
| chr8.3 | CDS | 68061899 | 68063038 | 68061899 | ID=cds.MS.gene08523.t1;Parent=MS.gene08523.t1 |
| Gene Sequence |
| Protein sequence |
