Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08707.t1 | XP_003606457.2 | 99.1 | 232 | 2 | 0 | 1 | 232 | 1 | 232 | 4.20E-131 | 477.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08707.t1 | Q7DLR9 | 84.6 | 227 | 35 | 0 | 6 | 232 | 20 | 246 | 5.6e-116 | 418.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08707.t1 | G7JQG4 | 99.1 | 232 | 2 | 0 | 1 | 232 | 1 | 232 | 3.0e-131 | 477.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08707.t1 | MTR_4g060540 | 99.138 | 232 | 2 | 0 | 1 | 232 | 1 | 232 | 5.39e-175 | 480 |
| MS.gene08707.t1 | MTR_6g084450 | 92.241 | 232 | 18 | 0 | 1 | 232 | 1 | 232 | 8.78e-165 | 454 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08707.t1 | AT1G56450 | 84.581 | 227 | 35 | 0 | 6 | 232 | 20 | 246 | 8.15e-151 | 419 |
Find 68 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGGAAACATTCCCTTAT+TGG | 0.168463 | 4.4:-44465826 | MS.gene08707:CDS |
| GATTCTCATGGCTTCTGATA+TGG | 0.255390 | 4.4:-44467290 | MS.gene08707:CDS |
| TTTCTCCACTGGCACCAATA+AGG | 0.276380 | 4.4:+44465812 | None:intergenic |
| TGAGGAAGGTGTTAAGTTAC+TGG | 0.278508 | 4.4:-44465202 | MS.gene08707:CDS |
| TTCTCCACTGGCACCAATAA+GGG | 0.339803 | 4.4:+44465813 | None:intergenic |
| TAACTCGGGTGATGTATAAT+AGG | 0.366562 | 4.4:-44465493 | MS.gene08707:CDS |
| TAAGTAGTTGTGCACCTCCT+TGG | 0.372052 | 4.4:+44465514 | None:intergenic |
| GTTGAGCGGGTGAAGCCTAT+TGG | 0.380343 | 4.4:-44465844 | MS.gene08707:CDS |
| TTGTGGAACTCCCTTGTACT+TGG | 0.383256 | 4.4:-44465452 | MS.gene08707:CDS |
| ATAAGGGAATGTTTCCCAAT+AGG | 0.385721 | 4.4:+44465829 | None:intergenic |
| AAGTAGTTGTGCACCTCCTT+GGG | 0.394091 | 4.4:+44465515 | None:intergenic |
| GAAGATGATCACATAGCTAC+TGG | 0.403261 | 4.4:-44465285 | MS.gene08707:CDS |
| TATATACTGATAGGTTCCTA+TGG | 0.410235 | 4.4:-44465889 | MS.gene08707:intron |
| ATTCTCATGGCTTCTGATAT+GGG | 0.417780 | 4.4:-44467289 | MS.gene08707:CDS |
| TTGAGCGGGTGAAGCCTATT+GGG | 0.432842 | 4.4:-44465843 | MS.gene08707:CDS |
| TTTAGGTATCCTTATGTGAC+TGG | 0.434414 | 4.4:-44467346 | MS.gene08707:intron |
| GCATGAAAATTTAAGCTTTG+AGG | 0.455532 | 4.4:-44465220 | MS.gene08707:CDS |
| AAAATCACTTATTTCTCCAC+TGG | 0.465617 | 4.4:+44465801 | None:intergenic |
| TGCCACTCATCACGAAGAAT+CGG | 0.486184 | 4.4:+44465240 | None:intergenic |
| AATGACAACATGTGGGATGA+TGG | 0.493331 | 4.4:-44465551 | MS.gene08707:CDS |
| TCTTCACACCGCCAAGTACA+AGG | 0.498174 | 4.4:+44465441 | None:intergenic |
| TACTTGGCGGTGTGAAGAAT+GGG | 0.498418 | 4.4:-44465436 | MS.gene08707:CDS |
| GTTGCTATTAAATACAAAGA+TGG | 0.506960 | 4.4:-44467313 | MS.gene08707:CDS |
| TTGCTATTAAATACAAAGAT+GGG | 0.508049 | 4.4:-44467312 | MS.gene08707:CDS |
| ATAGCTAAAATGACTGAAGA+AGG | 0.510679 | 4.4:-44463032 | MS.gene08707:CDS |
| GTACTTGGCGGTGTGAAGAA+TGG | 0.515176 | 4.4:-44465437 | MS.gene08707:CDS |
| ACAGAGGATCCAGTCACATA+AGG | 0.515515 | 4.4:+44467337 | None:intergenic |
| GATCACATAGCTACTGGGCT+AGG | 0.518077 | 4.4:-44465279 | MS.gene08707:CDS |
| GTCTGCTGTCAACAAGATAC+AGG | 0.522189 | 4.4:-44465145 | MS.gene08707:intron |
| AATCCCACAGTTGGTGCTGA+AGG | 0.522601 | 4.4:-44462951 | MS.gene08707:CDS |
| TGGAACTCCCTTGTACTTGG+CGG | 0.529647 | 4.4:-44465449 | MS.gene08707:CDS |
| TGGGATGATGGGAATTCTCT+AGG | 0.529822 | 4.4:-44465539 | MS.gene08707:CDS |
| CTTATCCAGGTTAACATGAT+CGG | 0.537714 | 4.4:-44465318 | MS.gene08707:intron |
| CAGTTGGTGCTGAAGGTTCG+TGG | 0.538915 | 4.4:-44462944 | MS.gene08707:CDS |
| CATTCCCTTATTGGTGCCAG+TGG | 0.542882 | 4.4:-44465817 | MS.gene08707:CDS |
| AGGTGCACAACTACTTAACT+CGG | 0.555533 | 4.4:-44465508 | MS.gene08707:CDS |
| CATCCCACATGTTGTCATTG+AGG | 0.558902 | 4.4:+44465555 | None:intergenic |
| ATACAAAGATGGGATTCTCA+TGG | 0.559607 | 4.4:-44467302 | MS.gene08707:CDS |
| GAAAATTTAAGCTTTGAGGA+AGG | 0.566096 | 4.4:-44465216 | MS.gene08707:CDS |
| ATGACAACATGTGGGATGAT+GGG | 0.570581 | 4.4:-44465550 | MS.gene08707:CDS |
| GCTTTCAAGAATCCCACAGT+TGG | 0.572715 | 4.4:-44462960 | MS.gene08707:CDS |
| GGCCGATTCTTCGTGATGAG+TGG | 0.581874 | 4.4:-44465242 | MS.gene08707:CDS |
| GTAACAAGTTCAACCCTTTG+TGG | 0.588106 | 4.4:-44465469 | MS.gene08707:CDS |
| GCGATACAAGAGTGTTGAGC+GGG | 0.588340 | 4.4:-44465857 | MS.gene08707:CDS |
| GTACAAGGGAGTTCCACAAA+GGG | 0.594100 | 4.4:+44465456 | None:intergenic |
| ATATACTGATAGGTTCCTAT+GGG | 0.594452 | 4.4:-44465888 | MS.gene08707:intron |
| GGCTAGGAAATCATCTTGCT+AGG | 0.594955 | 4.4:-44465263 | MS.gene08707:CDS |
| AAGAATGGGCAAAAGTACCT+TGG | 0.597083 | 4.4:-44465422 | MS.gene08707:CDS |
| AGCCAAGGCCTACCGTGCCA+AGG | 0.602974 | 4.4:+44465405 | None:intergenic |
| CGAACCTTCAGCACCAACTG+TGG | 0.603921 | 4.4:+44462947 | None:intergenic |
| GTATCGCAGTGTAGACCCAT+AGG | 0.606128 | 4.4:+44465873 | None:intergenic |
| AAGATGATCACATAGCTACT+GGG | 0.608518 | 4.4:-44465284 | MS.gene08707:CDS |
| GGTTCTCTGTGATTCAGCTA+CGG | 0.612448 | 4.4:+44467530 | None:intergenic |
| TGGGAATTCTCTAGGACCCA+AGG | 0.622304 | 4.4:-44465531 | MS.gene08707:CDS |
| AGTACAAGGGAGTTCCACAA+AGG | 0.648774 | 4.4:+44465455 | None:intergenic |
| TTATGTGACTGGATCCTCTG+TGG | 0.651498 | 4.4:-44467335 | MS.gene08707:CDS |
| CTCATGGCTTCTGATATGGG+AGG | 0.651719 | 4.4:-44467286 | MS.gene08707:intron |
| GGTGCACAACTACTTAACTC+GGG | 0.651806 | 4.4:-44465507 | MS.gene08707:CDS |
| GAACCTTCAGCACCAACTGT+GGG | 0.652084 | 4.4:+44462948 | None:intergenic |
| CTTCACACCGCCAAGTACAA+GGG | 0.656966 | 4.4:+44465442 | None:intergenic |
| TAAGCTCGTCGAGGTAACGT+TGG | 0.657412 | 4.4:+44465770 | None:intergenic |
| TGGGCAAAAGTACCTTGGCA+CGG | 0.676610 | 4.4:-44465417 | MS.gene08707:intron |
| TGCGATACAAGAGTGTTGAG+CGG | 0.680420 | 4.4:-44465858 | MS.gene08707:CDS |
| GTAGCCTCAATGACAACATG+TGG | 0.690284 | 4.4:-44465559 | MS.gene08707:intron |
| AGACTTACATAAGCTCGTCG+AGG | 0.707039 | 4.4:+44465761 | None:intergenic |
| GAATTCTCTAGGACCCAAGG+AGG | 0.725308 | 4.4:-44465528 | MS.gene08707:CDS |
| TAGCCTCAATGACAACATGT+GGG | 0.733746 | 4.4:-44465558 | MS.gene08707:CDS |
| GTATTTAATAGCAACCACAG+AGG | 0.775432 | 4.4:+44467321 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATTAAT+TGG | + | chr4.4:44463513-44463532 | None:intergenic | 0.0% |
| !! | TCTTAAATTTATAATTGTTA+GGG | - | chr4.4:44465537-44465556 | MS.gene08707:CDS | 10.0% |
| !! | AAAAGTCTAACAATTTATAA+AGG | + | chr4.4:44467346-44467365 | None:intergenic | 15.0% |
| !! | AATATTGAATATATACTGAT+AGG | - | chr4.4:44464580-44464599 | MS.gene08707:intron | 15.0% |
| !! | GTCTTAAATTTATAATTGTT+AGG | - | chr4.4:44465536-44465555 | MS.gene08707:CDS | 15.0% |
| !! | TATTATTCATAATCTTGTTA+AGG | - | chr4.4:44463324-44463343 | MS.gene08707:intron | 15.0% |
| !! | TTTCAAAATGAAACATAAAT+TGG | + | chr4.4:44465814-44465833 | None:intergenic | 15.0% |
| !!! | GAATTCTTCAAATTTAATTT+AGG | + | chr4.4:44463912-44463931 | None:intergenic | 15.0% |
| !! | AATAATGAAGTAATCAAATC+TGG | + | chr4.4:44464865-44464884 | None:intergenic | 20.0% |
| !! | AATTGAAACAGAAAAAGATA+TGG | + | chr4.4:44467085-44467104 | None:intergenic | 20.0% |
| !! | ATAATGAAAATACTCTCTAA+AGG | - | chr4.4:44466770-44466789 | MS.gene08707:intron | 20.0% |
| !! | ATTCTCATTAAAAACATACT+GGG | - | chr4.4:44467487-44467506 | MS.gene08707:intron | 20.0% |
| !! | ATTGAAAGAAAATAAAACAC+TGG | + | chr4.4:44464356-44464375 | None:intergenic | 20.0% |
| !! | CTAATTCTTTAATACTGTAA+GGG | - | chr4.4:44465433-44465452 | MS.gene08707:CDS | 20.0% |
| !! | GAAATCAAGAGAAATATATA+AGG | + | chr4.4:44465764-44465783 | None:intergenic | 20.0% |
| !! | GTAATATCAAACATAAAAGA+AGG | + | chr4.4:44464404-44464423 | None:intergenic | 20.0% |
| !! | TAAAAATCAAACCAACATTT+AGG | + | chr4.4:44463116-44463135 | None:intergenic | 20.0% |
| !! | TAAATTTCTGTGTTAGTTAA+TGG | - | chr4.4:44463552-44463571 | MS.gene08707:intron | 20.0% |
| !! | TAATGAAAATACTCTCTAAA+GGG | - | chr4.4:44466771-44466790 | MS.gene08707:intron | 20.0% |
| !!! | AACTTGTTTTAAGCAAAAAT+TGG | - | chr4.4:44466028-44466047 | MS.gene08707:intron | 20.0% |
| !!! | AGATAGATAGATACATATTT+TGG | - | chr4.4:44466906-44466925 | MS.gene08707:intron | 20.0% |
| !!! | ATAAATTGGTTTTCTAATGA+AGG | + | chr4.4:44465800-44465819 | None:intergenic | 20.0% |
| !!! | CAAATTAACACAACTATTTT+TGG | + | chr4.4:44464296-44464315 | None:intergenic | 20.0% |
| !!! | TAAATGTTGGTTTGATTTTT+AGG | - | chr4.4:44463115-44463134 | MS.gene08707:intron | 20.0% |
| !!! | TGATATGATTGTTTATTTCT+TGG | - | chr4.4:44465715-44465734 | MS.gene08707:intron | 20.0% |
| !!! | TTGCTATTAAATACAAAGAT+GGG | - | chr4.4:44463166-44463185 | MS.gene08707:intron | 20.0% |
| !!! | TTTTCAATTTACTCAGTTTA+TGG | - | chr4.4:44463025-44463044 | MS.gene08707:CDS | 20.0% |
| ! | AAATTTCATTGACAATCCAA+AGG | + | chr4.4:44465685-44465704 | None:intergenic | 25.0% |
| ! | AAGTGAAACCAAATTAGTTA+AGG | - | chr4.4:44463702-44463721 | MS.gene08707:intron | 25.0% |
| ! | ACGAAAAAAAAATGTTGCTA+TGG | - | chr4.4:44466278-44466297 | MS.gene08707:intron | 25.0% |
| ! | ACTTTCTTATTACCTAATCA+TGG | - | chr4.4:44466395-44466414 | MS.gene08707:intron | 25.0% |
| ! | ATAACACAATATAGAATCCT+TGG | - | chr4.4:44466188-44466207 | MS.gene08707:intron | 25.0% |
| ! | CAAAATAAAAAGAAAAGCCA+AGG | + | chr4.4:44465091-44465110 | None:intergenic | 25.0% |
| ! | CATTCTCATTAAAAACATAC+TGG | - | chr4.4:44467486-44467505 | MS.gene08707:intron | 25.0% |
| ! | CGAAAAAAAAATGTTGCTAT+GGG | - | chr4.4:44466279-44466298 | MS.gene08707:intron | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | + | chr4.4:44463966-44463985 | None:intergenic | 25.0% |
| ! | GAGGAACTAAAAAATTGTAT+TGG | + | chr4.4:44463969-44463988 | None:intergenic | 25.0% |
| ! | GCTAATTCTTTAATACTGTA+AGG | - | chr4.4:44465432-44465451 | MS.gene08707:CDS | 25.0% |
| ! | GGACTATAATATAACAGAAT+GGG | - | chr4.4:44466792-44466811 | MS.gene08707:intron | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | + | chr4.4:44463962-44463981 | None:intergenic | 25.0% |
| ! | TAGTATCTAAGTTCAATATC+TGG | + | chr4.4:44463671-44463690 | None:intergenic | 25.0% |
| ! | TATGTTTGATATTACACTCT+TGG | - | chr4.4:44464409-44464428 | MS.gene08707:intron | 25.0% |
| ! | TCTCTTAATTTCATCTTGTA+AGG | - | chr4.4:44467046-44467065 | MS.gene08707:intron | 25.0% |
| ! | TGAAGAAGGGAAAATAAATA+TGG | - | chr4.4:44466254-44466273 | MS.gene08707:intron | 25.0% |
| ! | TTCCATTAAGCAAAAATTTG+AGG | - | chr4.4:44466062-44466081 | MS.gene08707:intron | 25.0% |
| ! | TTTAGTTAAGGTTGAATTGA+TGG | - | chr4.4:44463603-44463622 | MS.gene08707:intron | 25.0% |
| !! | GTTGCTATTAAATACAAAGA+TGG | - | chr4.4:44463165-44463184 | MS.gene08707:intron | 25.0% |
| !! | TAATTTCATCTAGTTTGTGT+TGG | - | chr4.4:44466160-44466179 | MS.gene08707:intron | 25.0% |
| !! | TTTGAAATTGACCTAAATGT+TGG | - | chr4.4:44463102-44463121 | MS.gene08707:intron | 25.0% |
| !!! | AAAATGATGGAGGATTTTTT+AGG | - | chr4.4:44465999-44466018 | MS.gene08707:intron | 25.0% |
| !!! | AGATAGATACATATTTTGGA+AGG | - | chr4.4:44466910-44466929 | MS.gene08707:intron | 25.0% |
| !!! | CAGTATGTTTTTAATGAGAA+TGG | + | chr4.4:44467488-44467507 | None:intergenic | 25.0% |
| !!! | GATAAAGTGAACCTTTTTTT+GGG | - | chr4.4:44466705-44466724 | MS.gene08707:intron | 25.0% |
| !!! | TAAACTGCTTTTAAATGCTT+TGG | + | chr4.4:44465887-44465906 | None:intergenic | 25.0% |
| !!! | TATGTTTTTAATGAGAATGG+CGG | + | chr4.4:44467485-44467504 | None:intergenic | 25.0% |
| AAGCACTTCCTTAACTAATT+TGG | + | chr4.4:44463713-44463732 | None:intergenic | 30.0% | |
| AGAAAAAGATATGGTTAGAG+CGG | + | chr4.4:44467076-44467095 | None:intergenic | 30.0% | |
| AGCATCTGATTTCAATATCT+GGG | - | chr4.4:44463628-44463647 | MS.gene08707:intron | 30.0% | |
| ATAGCTAAAATGACTGAAGA+AGG | - | chr4.4:44467446-44467465 | MS.gene08707:intron | 30.0% | |
| ATATAACAGAATGGGATACA+TGG | - | chr4.4:44466800-44466819 | MS.gene08707:intron | 30.0% | |
| ATATACTGATAGGTTCCTAT+GGG | - | chr4.4:44464590-44464609 | MS.gene08707:intron | 30.0% | |
| ATCCATCCCAAATAAAGAAA+AGG | + | chr4.4:44465946-44465965 | None:intergenic | 30.0% | |
| CTAAAAAATTGTATTGGAGG+AGG | + | chr4.4:44463963-44463982 | None:intergenic | 30.0% | |
| CTAACAATACTCCCAAAAAA+AGG | + | chr4.4:44466719-44466738 | None:intergenic | 30.0% | |
| GAATAAGTGAAATGTGCAAA+GGG | + | chr4.4:44463477-44463496 | None:intergenic | 30.0% | |
| GAATTCGGAATTAAACCATT+AGG | - | chr4.4:44466615-44466634 | MS.gene08707:intron | 30.0% | |
| GCAATTTCAAACCTTTCTTT+GGG | - | chr4.4:44463233-44463252 | MS.gene08707:intron | 30.0% | |
| GCATGAAAATTTAAGCTTTG+AGG | - | chr4.4:44465258-44465277 | MS.gene08707:CDS | 30.0% | |
| GGGACTATAATATAACAGAA+TGG | - | chr4.4:44466791-44466810 | MS.gene08707:intron | 30.0% | |
| GTAAAAATATGGGCATATGT+AGG | + | chr4.4:44466559-44466578 | None:intergenic | 30.0% | |
| GTTCAAAATCAACACTTACA+TGG | + | chr4.4:44464889-44464908 | None:intergenic | 30.0% | |
| TAAAAGCAGTTTAACTAGTG+AGG | - | chr4.4:44465894-44465913 | MS.gene08707:intron | 30.0% | |
| TATATACTGATAGGTTCCTA+TGG | - | chr4.4:44464589-44464608 | MS.gene08707:intron | 30.0% | |
| TCTCTAGTAAATTCATTCGT+TGG | - | chr4.4:44462993-44463012 | MS.gene08707:CDS | 30.0% | |
| TGAATAAGTGAAATGTGCAA+AGG | + | chr4.4:44463478-44463497 | None:intergenic | 30.0% | |
| TGCAATTTCAAACCTTTCTT+TGG | - | chr4.4:44463232-44463251 | MS.gene08707:intron | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | + | chr4.4:44464048-44464067 | None:intergenic | 30.0% | |
| TGGCTTATTGTTGAGATTAT+GGG | + | chr4.4:44463443-44463462 | None:intergenic | 30.0% | |
| TGTACTTATGAATCTTATCC+AGG | - | chr4.4:44465147-44465166 | MS.gene08707:CDS | 30.0% | |
| TTATACCCATGCAAAATGAA+AGG | + | chr4.4:44466140-44466159 | None:intergenic | 30.0% | |
| TTGGCTTATTGTTGAGATTA+TGG | + | chr4.4:44463444-44463463 | None:intergenic | 30.0% | |
| ! | AAAATCACTTATTTCTCCAC+TGG | + | chr4.4:44464680-44464699 | None:intergenic | 30.0% |
| ! | AAAATCAGCCCATTATTTTC+CGG | + | chr4.4:44464541-44464560 | None:intergenic | 30.0% |
| ! | AGCCTCAAATTTTTGCTTAA+TGG | + | chr4.4:44466067-44466086 | None:intergenic | 30.0% |
| ! | ATCTGATCTAGTTTGATATC+TGG | - | chr4.4:44464181-44464200 | MS.gene08707:intron | 30.0% |
| ! | ATTAAGCAAAAATTTGAGGC+TGG | - | chr4.4:44466066-44466085 | MS.gene08707:intron | 30.0% |
| ! | ATTGGATTTTAAATCCACTC+CGG | - | chr4.4:44466479-44466498 | MS.gene08707:intron | 30.0% |
| ! | TTTCATCAGTTTTTCACCTT+TGG | - | chr4.4:44465666-44465685 | MS.gene08707:intron | 30.0% |
| ! | TTTTTCCGTTAGTACAATCT+TGG | - | chr4.4:44467293-44467312 | MS.gene08707:CDS | 30.0% |
| !! | ATGCCACCTTTTCTTTATTT+GGG | - | chr4.4:44465937-44465956 | MS.gene08707:intron | 30.0% |
| !! | ATGTTTTTAATGAGAATGGC+GGG | + | chr4.4:44467484-44467503 | None:intergenic | 30.0% |
| !! | GAAAATTTAAGCTTTGAGGA+AGG | - | chr4.4:44465262-44465281 | MS.gene08707:CDS | 30.0% |
| !! | TCAGTCAATTGATTTGCATT+TGG | - | chr4.4:44464778-44464797 | MS.gene08707:intron | 30.0% |
| !!! | CGGTTAATGAGTTTTAGTTA+AGG | - | chr4.4:44463591-44463610 | MS.gene08707:intron | 30.0% |
| !!! | GGATAAAGTGAACCTTTTTT+TGG | - | chr4.4:44466704-44466723 | MS.gene08707:intron | 30.0% |
| !!! | TAATGAGTTTTAGTTGAGGT+CGG | - | chr4.4:44464145-44464164 | MS.gene08707:intron | 30.0% |
| !!! | TGGTTAATGAGTTTTAGTTG+AGG | - | chr4.4:44464141-44464160 | MS.gene08707:intron | 30.0% |
| !!! | TTTTTTAGTTCCTCCAAATG+AGG | - | chr4.4:44463975-44463994 | MS.gene08707:intron | 30.0% |
| AAAACTAACTGGAAGATGAG+AGG | - | chr4.4:44466455-44466474 | MS.gene08707:intron | 35.0% | |
| AAACAAAGCCTTAGTGGTTA+TGG | - | chr4.4:44464121-44464140 | MS.gene08707:intron | 35.0% | |
| AAACTAACTGGAAGATGAGA+GGG | - | chr4.4:44466456-44466475 | MS.gene08707:intron | 35.0% | |
| AAAGGTTCACTTTATCCTCA+AGG | + | chr4.4:44466701-44466720 | None:intergenic | 35.0% | |
| AACAATAAGCCAATCCAAAC+GGG | - | chr4.4:44463451-44463470 | MS.gene08707:intron | 35.0% | |
| AAGATGATCACATAGCTACT+GGG | - | chr4.4:44465194-44465213 | MS.gene08707:CDS | 35.0% | |
| AATAAAGAAAAGGTGGCATG+TGG | + | chr4.4:44465936-44465955 | None:intergenic | 35.0% | |
| AATAGCCTACTATAACGCTT+AGG | + | chr4.4:44466432-44466451 | None:intergenic | 35.0% | |
| AGAGAGCAAAAGAAACCTAA+AGG | + | chr4.4:44467031-44467050 | None:intergenic | 35.0% | |
| AGGCTATTTGCAAAACTAAC+TGG | - | chr4.4:44466444-44466463 | MS.gene08707:intron | 35.0% | |
| ATAAAGAAAAGGTGGCATGT+GGG | + | chr4.4:44465935-44465954 | None:intergenic | 35.0% | |
| ATAAGGGAATGTTTCCCAAT+AGG | + | chr4.4:44464652-44464671 | None:intergenic | 35.0% | |
| ATACAAAGATGGGATTCTCA+TGG | - | chr4.4:44463176-44463195 | MS.gene08707:intron | 35.0% | |
| ATAGCCTACTATAACGCTTA+GGG | + | chr4.4:44466431-44466450 | None:intergenic | 35.0% | |
| ATCTAGATTCGAGGGATATT+GGG | - | chr4.4:44466965-44466984 | MS.gene08707:intron | 35.0% | |
| ATCTGATTTCAATATCTGGG+TGG | - | chr4.4:44463631-44463650 | MS.gene08707:intron | 35.0% | |
| ATTCTCATGGCTTCTGATAT+GGG | - | chr4.4:44463189-44463208 | MS.gene08707:intron | 35.0% | |
| ATTGGGAAACATTCCCTTAT+TGG | - | chr4.4:44464652-44464671 | MS.gene08707:intron | 35.0% | |
| CAACAATAAGCCAATCCAAA+CGG | - | chr4.4:44463450-44463469 | MS.gene08707:intron | 35.0% | |
| CAAGATCAAGAGAGAAGATA+AGG | - | chr4.4:44466883-44466902 | MS.gene08707:intron | 35.0% | |
| CATCCCAAATAAAGAAAAGG+TGG | + | chr4.4:44465943-44465962 | None:intergenic | 35.0% | |
| CTAAAACTCATTAACCGCAA+AGG | + | chr4.4:44463588-44463607 | None:intergenic | 35.0% | |
| CTCATTAACCATAACCACTA+AGG | + | chr4.4:44464132-44464151 | None:intergenic | 35.0% | |
| CTTATCCAGGTTAACATGAT+CGG | - | chr4.4:44465160-44465179 | MS.gene08707:CDS | 35.0% | |
| GACGTATATTGCAATTGCAT+AGG | - | chr4.4:44465861-44465880 | MS.gene08707:CDS | 35.0% | |
| GAGAAAGGTGGGAATTTATT+CGG | - | chr4.4:44466829-44466848 | MS.gene08707:intron | 35.0% | |
| GAGCATCTGATTTCAATATC+TGG | - | chr4.4:44463627-44463646 | MS.gene08707:intron | 35.0% | |
| GATATCTGGCTGGAAATTAT+TGG | - | chr4.4:44464195-44464214 | MS.gene08707:intron | 35.0% | |
| GGGATTAGAAAAAACCGATA+AGG | + | chr4.4:44465969-44465988 | None:intergenic | 35.0% | |
| GTATTTAATAGCAACCACAG+AGG | + | chr4.4:44463160-44463179 | None:intergenic | 35.0% | |
| GTCCTGTGCAGTAAAAATAT+GGG | + | chr4.4:44466569-44466588 | None:intergenic | 35.0% | |
| GTCTTAATACTCTGATTCCT+GGG | + | chr4.4:44464274-44464293 | None:intergenic | 35.0% | |
| GTGGAACTTAACTAAGAGAT+CGG | - | chr4.4:44466343-44466362 | MS.gene08707:intron | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | + | chr4.4:44464049-44464068 | None:intergenic | 35.0% | |
| TAACTCGGGTGATGTATAAT+AGG | - | chr4.4:44464985-44465004 | MS.gene08707:intron | 35.0% | |
| TAATTCCGATCATGTTAACC+TGG | + | chr4.4:44465168-44465187 | None:intergenic | 35.0% | |
| TACGTCTGAATGAGACAAAT+TGG | + | chr4.4:44465847-44465866 | None:intergenic | 35.0% | |
| TATACAAAACCCTCCTCATT+TGG | + | chr4.4:44463991-44464010 | None:intergenic | 35.0% | |
| TCTTAATACTCTGATTCCTG+GGG | + | chr4.4:44464273-44464292 | None:intergenic | 35.0% | |
| TGCTGAACTCTGGATTATTA+GGG | - | chr4.4:44464238-44464257 | MS.gene08707:intron | 35.0% | |
| TTCTGTGTTAGTTAATGGAG+TGG | - | chr4.4:44463557-44463576 | MS.gene08707:intron | 35.0% | |
| TTGCTGAACTCTGGATTATT+AGG | - | chr4.4:44464237-44464256 | MS.gene08707:intron | 35.0% | |
| TTTAGGTATCCTTATGTGAC+TGG | - | chr4.4:44463132-44463151 | MS.gene08707:intron | 35.0% | |
| ! | AAATCAGCCCATTATTTTCC+GGG | + | chr4.4:44464540-44464559 | None:intergenic | 35.0% |
| ! | AATCTGGAATAACTGAGTTG+CGG | + | chr4.4:44464849-44464868 | None:intergenic | 35.0% |
| ! | CATGCCACCTTTTCTTTATT+TGG | - | chr4.4:44465936-44465955 | MS.gene08707:intron | 35.0% |
| ! | GCTTTCCTTTCATTTTGCAT+GGG | - | chr4.4:44466132-44466151 | MS.gene08707:intron | 35.0% |
| ! | GTATTTTCCTCACTCTATTC+CGG | - | chr4.4:44467169-44467188 | MS.gene08707:intron | 35.0% |
| ! | GTGTACTTTTATATCGTGAC+AGG | - | chr4.4:44465311-44465330 | MS.gene08707:CDS | 35.0% |
| ! | TATAGAATCCTTGGTGTACA+AGG | - | chr4.4:44466197-44466216 | MS.gene08707:intron | 35.0% |
| ! | TATTTGGGATGGATCCTTAT+CGG | - | chr4.4:44465952-44465971 | MS.gene08707:intron | 35.0% |
| ! | TCCATCATTTTGTGACAAGT+GGG | + | chr4.4:44465990-44466009 | None:intergenic | 35.0% |
| ! | TGCTTTCCTTTCATTTTGCA+TGG | - | chr4.4:44466131-44466150 | MS.gene08707:intron | 35.0% |
| !! | AGTTATTTGCTATGCGATTG+AGG | + | chr4.4:44465407-44465426 | None:intergenic | 35.0% |
| !! | ATGGGTTTGTGATAGTGTTT+TGG | - | chr4.4:44466297-44466316 | MS.gene08707:intron | 35.0% |
| !! | CACCTTTTCTTTATTTGGGA+TGG | - | chr4.4:44465941-44465960 | MS.gene08707:intron | 35.0% |
| !! | GCTATTTCTCATCTTCTGAT+AGG | + | chr4.4:44467197-44467216 | None:intergenic | 35.0% |
| !! | GGCTTTAAAGTTCCATGATT+AGG | + | chr4.4:44466410-44466429 | None:intergenic | 35.0% |
| !!! | TGATGGAGGATTTTTTAGGA+TGG | - | chr4.4:44466003-44466022 | MS.gene08707:intron | 35.0% |
| AAACCTTTCTTTGGGCTGTT+TGG | - | chr4.4:44463241-44463260 | MS.gene08707:intron | 40.0% | |
| AAACTCGCAAACAAAGCCTA+AGG | + | chr4.4:44463739-44463758 | None:intergenic | 40.0% | |
| AAAGCCCTAAGCGTTATAGT+AGG | - | chr4.4:44466424-44466443 | MS.gene08707:intron | 40.0% | |
| AAATTCCCACCTTTCTCCTA+AGG | + | chr4.4:44466826-44466845 | None:intergenic | 40.0% | |
| AACCATTAGGCTTCAAGCTA+TGG | - | chr4.4:44466628-44466647 | MS.gene08707:intron | 40.0% | |
| AATCCAAACAGCCCAAAGAA+AGG | + | chr4.4:44463247-44463266 | None:intergenic | 40.0% | |
| AATGACAACATGTGGGATGA+TGG | - | chr4.4:44464927-44464946 | MS.gene08707:intron | 40.0% | |
| ACACTAGTGGCAACCAAAAT+TGG | + | chr4.4:44466517-44466536 | None:intergenic | 40.0% | |
| ACCATTAGGCTTCAAGCTAT+GGG | - | chr4.4:44466629-44466648 | MS.gene08707:intron | 40.0% | |
| ACCTAAAGGATAAAACCTGC+TGG | + | chr4.4:44467017-44467036 | None:intergenic | 40.0% | |
| ACTACGAGCAATAACACTAG+TGG | + | chr4.4:44466530-44466549 | None:intergenic | 40.0% | |
| AGGTGCACAACTACTTAACT+CGG | - | chr4.4:44464970-44464989 | MS.gene08707:intron | 40.0% | |
| ATGACAACATGTGGGATGAT+GGG | - | chr4.4:44464928-44464947 | MS.gene08707:intron | 40.0% | |
| CAAAACAGACTTGGATAGGA+AGG | - | chr4.4:44466860-44466879 | MS.gene08707:intron | 40.0% | |
| CACTTGTCACAAAATGATGG+AGG | - | chr4.4:44465989-44466008 | MS.gene08707:intron | 40.0% | |
| CATCTAGATTCGAGGGATAT+TGG | - | chr4.4:44466964-44466983 | MS.gene08707:intron | 40.0% | |
| CCATTCTCCCGGAAAATAAT+GGG | - | chr4.4:44464530-44464549 | MS.gene08707:intron | 40.0% | |
| CTTGGTAAACTGTGATTCCT+TGG | - | chr4.4:44464427-44464446 | MS.gene08707:intron | 40.0% | |
| GAAATAGAGGAAAATGGGAG+AGG | + | chr4.4:44464043-44464062 | None:intergenic | 40.0% | |
| GAAGATGATCACATAGCTAC+TGG | - | chr4.4:44465193-44465212 | MS.gene08707:CDS | 40.0% | |
| GATATTTCGACAACCTCCAT+AGG | + | chr4.4:44465467-44465486 | None:intergenic | 40.0% | |
| GATTCTCATGGCTTCTGATA+TGG | - | chr4.4:44463188-44463207 | MS.gene08707:intron | 40.0% | |
| GGAAAAAAGGAATGAGCATG+TGG | + | chr4.4:44464068-44464087 | None:intergenic | 40.0% | |
| GGTCCTGTGCAGTAAAAATA+TGG | + | chr4.4:44466570-44466589 | None:intergenic | 40.0% | |
| GGTCTTAATACTCTGATTCC+TGG | + | chr4.4:44464275-44464294 | None:intergenic | 40.0% | |
| GTAACAAGTTCAACCCTTTG+TGG | - | chr4.4:44465009-44465028 | MS.gene08707:intron | 40.0% | |
| GTTATCTCTTTGCTGAACTC+TGG | - | chr4.4:44464228-44464247 | MS.gene08707:intron | 40.0% | |
| TAAATTGCGAAGTAGACGAG+AGG | + | chr4.4:44465617-44465636 | None:intergenic | 40.0% | |
| TACTAAAACCAGCACTTCCA+AGG | + | chr4.4:44464447-44464466 | None:intergenic | 40.0% | |
| TAGACTCACGGTTGTTAAGA+GGG | - | chr4.4:44466736-44466755 | MS.gene08707:intron | 40.0% | |
| TAGCCTCAATGACAACATGT+GGG | - | chr4.4:44464920-44464939 | MS.gene08707:intron | 40.0% | |
| TCACTTTATCCTCAAGGTGA+TGG | + | chr4.4:44466695-44466714 | None:intergenic | 40.0% | |
| TCATCTTACTTACCCCAACT+CGG | - | chr4.4:44465378-44465397 | MS.gene08707:intron | 40.0% | |
| TCTCATCTTCTGATAGGAAC+CGG | + | chr4.4:44467191-44467210 | None:intergenic | 40.0% | |
| TGAGCATGTGGAAGAAATAG+AGG | + | chr4.4:44464056-44464075 | None:intergenic | 40.0% | |
| TGTAACAACCAACGGAGAAA+GGG | + | chr4.4:44465594-44465613 | None:intergenic | 40.0% | |
| TTACTAGAGAGAGAGAGAGA+GGG | + | chr4.4:44462983-44463002 | None:intergenic | 40.0% | |
| TTAGACTCACGGTTGTTAAG+AGG | - | chr4.4:44466735-44466754 | MS.gene08707:intron | 40.0% | |
| TTAGTTCCTCCAAATGAGGA+GGG | - | chr4.4:44463979-44463998 | MS.gene08707:intron | 40.0% | |
| TTCCGTTAGTACAATCTTGG+CGG | - | chr4.4:44467296-44467315 | MS.gene08707:CDS | 40.0% | |
| TTTACCTTAGAACCCTGTAC+TGG | - | chr4.4:44466229-44466248 | MS.gene08707:intron | 40.0% | |
| TTTACTAGAGAGAGAGAGAG+AGG | + | chr4.4:44462984-44463003 | None:intergenic | 40.0% | |
| ! | AAGGAAAGGAAAGGCTTTGA+GGG | - | chr4.4:44463766-44463785 | MS.gene08707:intron | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | + | chr4.4:44463956-44463975 | None:intergenic | 40.0% |
| ! | ATTTTAAATCCACTCCGGAC+TGG | - | chr4.4:44466484-44466503 | MS.gene08707:intron | 40.0% |
| ! | CATTATTTTCCGGGAGAATG+GGG | + | chr4.4:44464531-44464550 | None:intergenic | 40.0% |
| ! | CCATCATTTTGTGACAAGTG+GGG | + | chr4.4:44465989-44466008 | None:intergenic | 40.0% |
| ! | CCATTATTTTCCGGGAGAAT+GGG | + | chr4.4:44464532-44464551 | None:intergenic | 40.0% |
| ! | CTCCATCATTTTGTGACAAG+TGG | + | chr4.4:44465991-44466010 | None:intergenic | 40.0% |
| ! | GATCTAGTTTGATATCTGGC+TGG | - | chr4.4:44464185-44464204 | MS.gene08707:intron | 40.0% |
| ! | TATCCTCAAGGTGATGGTTA+AGG | + | chr4.4:44466689-44466708 | None:intergenic | 40.0% |
| ! | TGTAAGGGAGCATAATCCTA+TGG | - | chr4.4:44465448-44465467 | MS.gene08707:CDS | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | + | chr4.4:44463955-44463974 | None:intergenic | 40.0% |
| ! | TTTAGTTCCTCCAAATGAGG+AGG | - | chr4.4:44463978-44463997 | MS.gene08707:intron | 40.0% |
| ! | TTTTAAATCCACTCCGGACT+GGG | - | chr4.4:44466485-44466504 | MS.gene08707:intron | 40.0% |
| ! | TTTTACTGCACAGGACCATT+AGG | - | chr4.4:44466573-44466592 | MS.gene08707:intron | 40.0% |
| !! | AAGAATGGGCAAAAGTACCT+TGG | - | chr4.4:44465056-44465075 | MS.gene08707:intron | 40.0% |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | + | chr4.4:44464114-44464133 | None:intergenic | 40.0% |
| !! | TGAGGAAGGTGTTAAGTTAC+TGG | - | chr4.4:44465276-44465295 | MS.gene08707:CDS | 40.0% |
| !! | TGCCCATATTTTTACTGCAC+AGG | - | chr4.4:44466564-44466583 | MS.gene08707:intron | 40.0% |
| !! | TGGGAGTATTGTTAGACTCA+CGG | - | chr4.4:44466724-44466743 | MS.gene08707:intron | 40.0% |
| !! | TTAGGCTTTGTTTGCGAGTT+TGG | - | chr4.4:44463738-44463757 | MS.gene08707:intron | 40.0% |
| !! | TTTAGTTGAGGTCGGTTTGA+TGG | - | chr4.4:44464153-44464172 | MS.gene08707:intron | 40.0% |
| !! | TTTTGGTTGCTTCCTTTCAG+TGG | - | chr4.4:44466314-44466333 | MS.gene08707:intron | 40.0% |
| AAATTGGAGACTTCCCAGTC+CGG | + | chr4.4:44466501-44466520 | None:intergenic | 45.0% | |
| AACTGGAAGATGAGAGGGAT+TGG | - | chr4.4:44466461-44466480 | MS.gene08707:intron | 45.0% | |
| AAGTAGTTGTGCACCTCCTT+GGG | + | chr4.4:44464966-44464985 | None:intergenic | 45.0% | |
| AAGTTGAAACCCCATTCTCC+CGG | - | chr4.4:44464519-44464538 | MS.gene08707:intron | 45.0% | |
| ACAAAACCCTCCTCATTTGG+AGG | + | chr4.4:44463988-44464007 | None:intergenic | 45.0% | |
| ACAGAGGATCCAGTCACATA+AGG | + | chr4.4:44463144-44463163 | None:intergenic | 45.0% | |
| ACTCGCAAACAAAGCCTTAG+TGG | - | chr4.4:44464115-44464134 | MS.gene08707:intron | 45.0% | |
| AGAATGGGATACATGGCCTT+AGG | - | chr4.4:44466807-44466826 | MS.gene08707:intron | 45.0% | |
| AGACTTACATAAGCTCGTCG+AGG | + | chr4.4:44464720-44464739 | None:intergenic | 45.0% | |
| AGATTCGAGGGATATTGGGT+GGG | - | chr4.4:44466969-44466988 | MS.gene08707:intron | 45.0% | |
| AGGTGGGAATTTATTCGGCA+AGG | - | chr4.4:44466834-44466853 | MS.gene08707:intron | 45.0% | |
| AGTACAAGGGAGTTCCACAA+AGG | + | chr4.4:44465026-44465045 | None:intergenic | 45.0% | |
| ATAGAGGAAAATGGGAGAGG+AGG | + | chr4.4:44464040-44464059 | None:intergenic | 45.0% | |
| ATAGGAACCGGAATAGAGTG+AGG | + | chr4.4:44467179-44467198 | None:intergenic | 45.0% | |
| ATGGAGTGGTTGAACCTTTG+CGG | - | chr4.4:44463571-44463590 | MS.gene08707:intron | 45.0% | |
| CATCCCACATGTTGTCATTG+AGG | + | chr4.4:44464926-44464945 | None:intergenic | 45.0% | |
| CATCTTACTTACCCCAACTC+GGG | - | chr4.4:44465379-44465398 | MS.gene08707:intron | 45.0% | |
| CCCATTCTCCCGGAAAATAA+TGG | - | chr4.4:44464529-44464548 | MS.gene08707:intron | 45.0% | |
| CCCCACTTGTCACAAAATGA+TGG | - | chr4.4:44465986-44466005 | MS.gene08707:intron | 45.0% | |
| CCTTGAATCCTTGTACACCA+AGG | + | chr4.4:44466208-44466227 | None:intergenic | 45.0% | |
| CTCTGATTCCTGGGGAAAAA+AGG | + | chr4.4:44464265-44464284 | None:intergenic | 45.0% | |
| GAAAGTCTGGTAAGGAACTC+AGG | - | chr4.4:44466991-44467010 | MS.gene08707:intron | 45.0% | |
| GAAGGAAAGGAAAGGCTTTG+AGG | - | chr4.4:44463765-44463784 | MS.gene08707:intron | 45.0% | |
| GACCGCCAAGATTGTACTAA+CGG | + | chr4.4:44467301-44467320 | None:intergenic | 45.0% | |
| GCAGTTTAACTAGTGAGGAC+TGG | - | chr4.4:44465899-44465918 | MS.gene08707:intron | 45.0% | |
| GCTTTCAAGAATCCCACAGT+TGG | - | chr4.4:44467518-44467537 | MS.gene08707:intron | 45.0% | |
| GGCTAGGAAATCATCTTGCT+AGG | - | chr4.4:44465215-44465234 | MS.gene08707:CDS | 45.0% | |
| GGTGCAAAACAGACTTGGAT+AGG | - | chr4.4:44466856-44466875 | MS.gene08707:intron | 45.0% | |
| GGTGCACAACTACTTAACTC+GGG | - | chr4.4:44464971-44464990 | MS.gene08707:intron | 45.0% | |
| GGTGGGAATTTATTCGGCAA+GGG | - | chr4.4:44466835-44466854 | MS.gene08707:intron | 45.0% | |
| GGTTCTCTGTGATTCAGCTA+CGG | + | chr4.4:44462951-44462970 | None:intergenic | 45.0% | |
| GGTTGTTAAGAGGGTAGGAT+GGG | - | chr4.4:44466745-44466764 | MS.gene08707:intron | 45.0% | |
| GTACAAGGGAGTTCCACAAA+GGG | + | chr4.4:44465025-44465044 | None:intergenic | 45.0% | |
| GTAGCCTCAATGACAACATG+TGG | - | chr4.4:44464919-44464938 | MS.gene08707:intron | 45.0% | |
| GTCTGCTGTCAACAAGATAC+AGG | - | chr4.4:44465333-44465352 | MS.gene08707:intron | 45.0% | |
| GTGTAACAACCAACGGAGAA+AGG | + | chr4.4:44465595-44465614 | None:intergenic | 45.0% | |
| GTTCCTTAACCATCACCTTG+AGG | - | chr4.4:44466683-44466702 | MS.gene08707:intron | 45.0% | |
| TAAGTAGTTGTGCACCTCCT+TGG | + | chr4.4:44464967-44464986 | None:intergenic | 45.0% | |
| TACTAGAGAGAGAGAGAGAG+GGG | + | chr4.4:44462982-44463001 | None:intergenic | 45.0% | |
| TACTTGGCGGTGTGAAGAAT+GGG | - | chr4.4:44465042-44465061 | MS.gene08707:intron | 45.0% | |
| TAGAGGAAAATGGGAGAGGA+GGG | + | chr4.4:44464039-44464058 | None:intergenic | 45.0% | |
| TAGATTCGAGGGATATTGGG+TGG | - | chr4.4:44466968-44466987 | MS.gene08707:intron | 45.0% | |
| TCCCATAGCTTGAAGCCTAA+TGG | + | chr4.4:44466633-44466652 | None:intergenic | 45.0% | |
| TGCCACTCATCACGAAGAAT+CGG | + | chr4.4:44465241-44465260 | None:intergenic | 45.0% | |
| TGGAATAACTGAGTTGCGGA+CGG | + | chr4.4:44464845-44464864 | None:intergenic | 45.0% | |
| TTATGTGACTGGATCCTCTG+TGG | - | chr4.4:44463143-44463162 | MS.gene08707:intron | 45.0% | |
| TTCCACAAGCATCCACTGAA+AGG | + | chr4.4:44466329-44466348 | None:intergenic | 45.0% | |
| TTCCTTTCAGTGGATGCTTG+TGG | - | chr4.4:44466324-44466343 | MS.gene08707:intron | 45.0% | |
| TTCTCCACTGGCACCAATAA+GGG | + | chr4.4:44464668-44464687 | None:intergenic | 45.0% | |
| TTGTGGAACTCCCTTGTACT+TGG | - | chr4.4:44465026-44465045 | MS.gene08707:intron | 45.0% | |
| TTTCTCCACTGGCACCAATA+AGG | + | chr4.4:44464669-44464688 | None:intergenic | 45.0% | |
| ! | AAGGGAGCATAATCCTATGG+AGG | - | chr4.4:44465451-44465470 | MS.gene08707:CDS | 45.0% |
| ! | ACGAGAGGTGTAACAACCAA+CGG | + | chr4.4:44465602-44465621 | None:intergenic | 45.0% |
| ! | AGGTGATGGTTAAGGAACAC+TGG | + | chr4.4:44466681-44466700 | None:intergenic | 45.0% |
| ! | CCCATTATTTTCCGGGAGAA+TGG | + | chr4.4:44464533-44464552 | None:intergenic | 45.0% |
| ! | CCTTGGTGTACAAGGATTCA+AGG | - | chr4.4:44466205-44466224 | MS.gene08707:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr4.4:44463743-44463762 | MS.gene08707:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr4.4:44463762-44463743 | None:intergenic | 45.0% |
| ! | GACTGGGAAGTCTCCAATTT+TGG | - | chr4.4:44466501-44466520 | MS.gene08707:intron | 45.0% |
| ! | GATACATGGCCTTAGGAGAA+AGG | - | chr4.4:44466814-44466833 | MS.gene08707:intron | 45.0% |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | + | chr4.4:44463954-44463973 | None:intergenic | 45.0% |
| !! | AAGGAGAGCATCTAGATTCG+AGG | - | chr4.4:44466956-44466975 | MS.gene08707:intron | 45.0% |
| !! | AGGAAAGGAAAGGCTTTGAG+GGG | - | chr4.4:44463767-44463786 | MS.gene08707:intron | 45.0% |
| !! | AGGAGAGCATCTAGATTCGA+GGG | - | chr4.4:44466957-44466976 | MS.gene08707:intron | 45.0% |
| !! | GCCAGCAGGTTTTATCCTTT+AGG | - | chr4.4:44467013-44467032 | MS.gene08707:intron | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr4.4:44463742-44463761 | MS.gene08707:intron | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr4.4:44463761-44463742 | None:intergenic | 45.0% |
| !! | TAAGGAAGTGCTTGAGCCTT+AGG | - | chr4.4:44463720-44463739 | MS.gene08707:intron | 45.0% |
| !! | TGCGATACAAGAGTGTTGAG+CGG | - | chr4.4:44464620-44464639 | MS.gene08707:intron | 45.0% |
| !! | TGGGATGATGGGAATTCTCT+AGG | - | chr4.4:44464939-44464958 | MS.gene08707:intron | 45.0% |
| !!! | ATTAGGGACCTTTTTTCCCC+AGG | - | chr4.4:44464254-44464273 | MS.gene08707:intron | 45.0% |
| AAATGGGAGAGGAGGGCTTT+AGG | + | chr4.4:44464032-44464051 | None:intergenic | 50.0% | |
| AAATGTGCAAAGGGCCCGTT+TGG | + | chr4.4:44463468-44463487 | None:intergenic | 50.0% | |
| AATGGGAGAGGAGGGCTTTA+GGG | + | chr4.4:44464031-44464050 | None:intergenic | 50.0% | |
| ACAGGACCATTAGGCGTCAT+GGG | - | chr4.4:44466582-44466601 | MS.gene08707:intron | 50.0% | |
| ACCCTGTACTGGAGTGAAGA+AGG | - | chr4.4:44466240-44466259 | MS.gene08707:intron | 50.0% | |
| AGGGGAAGGCTTGGGAAAAA+AGG | + | chr4.4:44464081-44464100 | None:intergenic | 50.0% | |
| ATGGGGGCTATCGAGGAATT+CGG | - | chr4.4:44466600-44466619 | MS.gene08707:intron | 50.0% | |
| CACTCCAGTACAGGGTTCTA+AGG | + | chr4.4:44466236-44466255 | None:intergenic | 50.0% | |
| CCCTGTACTGGAGTGAAGAA+GGG | - | chr4.4:44466241-44466260 | MS.gene08707:intron | 50.0% | |
| CCCTTCTTCACTCCAGTACA+GGG | + | chr4.4:44466244-44466263 | None:intergenic | 50.0% | |
| CGGTTGTTAAGAGGGTAGGA+TGG | - | chr4.4:44466744-44466763 | MS.gene08707:intron | 50.0% | |
| CTCACGGTTGTTAAGAGGGT+AGG | - | chr4.4:44466740-44466759 | MS.gene08707:intron | 50.0% | |
| CTCATGGCTTCTGATATGGG+AGG | - | chr4.4:44463192-44463211 | MS.gene08707:intron | 50.0% | |
| CTTCACACCGCCAAGTACAA+GGG | + | chr4.4:44465039-44465058 | None:intergenic | 50.0% | |
| GAACCTTCAGCACCAACTGT+GGG | + | chr4.4:44467533-44467552 | None:intergenic | 50.0% | |
| GATCACATAGCTACTGGGCT+AGG | - | chr4.4:44465199-44465218 | MS.gene08707:CDS | 50.0% | |
| GGATATTGGGTGGGAAAGTC+TGG | - | chr4.4:44466978-44466997 | MS.gene08707:intron | 50.0% | |
| GTACTTGGCGGTGTGAAGAA+TGG | - | chr4.4:44465041-44465060 | MS.gene08707:intron | 50.0% | |
| GTATCGCAGTGTAGACCCAT+AGG | + | chr4.4:44464608-44464627 | None:intergenic | 50.0% | |
| TAAGCTCGTCGAGGTAACGT+TGG | + | chr4.4:44464711-44464730 | None:intergenic | 50.0% | |
| TCCCTTCTTCACTCCAGTAC+AGG | + | chr4.4:44466245-44466264 | None:intergenic | 50.0% | |
| TCTTCACACCGCCAAGTACA+AGG | + | chr4.4:44465040-44465059 | None:intergenic | 50.0% | |
| TGGAACTCCCTTGTACTTGG+CGG | - | chr4.4:44465029-44465048 | MS.gene08707:intron | 50.0% | |
| TTGAGCGGGTGAAGCCTATT+GGG | - | chr4.4:44464635-44464654 | MS.gene08707:intron | 50.0% | |
| TTGGAGGGGAAGGAAAGGAA+AGG | - | chr4.4:44463757-44463776 | MS.gene08707:intron | 50.0% | |
| TTGGGTGGGAAAGTCTGGTA+AGG | - | chr4.4:44466983-44467002 | MS.gene08707:intron | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | + | chr4.4:44463767-44463748 | None:intergenic | 50.0% | |
| ! | ACATGGCCTTAGGAGAAAGG+TGG | - | chr4.4:44466817-44466836 | MS.gene08707:intron | 50.0% |
| ! | CATGGCCTTAGGAGAAAGGT+GGG | - | chr4.4:44466818-44466837 | MS.gene08707:intron | 50.0% |
| ! | CTGTGATTCCTTGGAAGTGC+TGG | - | chr4.4:44464436-44464455 | MS.gene08707:intron | 50.0% |
| ! | GCAAGGGTGCAAAACAGACT+TGG | - | chr4.4:44466851-44466870 | MS.gene08707:intron | 50.0% |
| !! | AATCCCACAGTTGGTGCTGA+AGG | - | chr4.4:44467527-44467546 | MS.gene08707:intron | 50.0% |
| !! | CAAAAGTACCTTGGCACGGT+AGG | - | chr4.4:44465065-44465084 | MS.gene08707:intron | 50.0% |
| !! | CATTCCCTTATTGGTGCCAG+TGG | - | chr4.4:44464661-44464680 | MS.gene08707:intron | 50.0% |
| !! | GAATTCTCTAGGACCCAAGG+AGG | - | chr4.4:44464950-44464969 | MS.gene08707:intron | 50.0% |
| !! | GCGATACAAGAGTGTTGAGC+GGG | - | chr4.4:44464621-44464640 | MS.gene08707:intron | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr4.4:44463741-44463760 | MS.gene08707:intron | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr4.4:44463760-44463741 | None:intergenic | 50.0% |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | + | chr4.4:44463953-44463972 | None:intergenic | 50.0% |
| !! | TGGGAATTCTCTAGGACCCA+AGG | - | chr4.4:44464947-44464966 | MS.gene08707:intron | 50.0% |
| !! | TGGGCAAAAGTACCTTGGCA+CGG | - | chr4.4:44465061-44465080 | MS.gene08707:intron | 50.0% |
| !!! | TATTGGAGGAGGGTTTTGGG+GGG | + | chr4.4:44463952-44463971 | None:intergenic | 50.0% |
| AGAGAGAGAGGGGACGTACA+AGG | + | chr4.4:44462972-44462991 | None:intergenic | 55.0% | |
| AGGACCATTAGGCGTCATGG+GGG | - | chr4.4:44466584-44466603 | MS.gene08707:intron | 55.0% | |
| ATAGCCCCCATGACGCCTAA+TGG | + | chr4.4:44466591-44466610 | None:intergenic | 55.0% | |
| CACAGGACCATTAGGCGTCA+TGG | - | chr4.4:44466581-44466600 | MS.gene08707:intron | 55.0% | |
| CAGCCATTAAACTCCCACCG+AGG | + | chr4.4:44466656-44466675 | None:intergenic | 55.0% | |
| CAGGACCATTAGGCGTCATG+GGG | - | chr4.4:44466583-44466602 | MS.gene08707:intron | 55.0% | |
| CGAACCTTCAGCACCAACTG+TGG | + | chr4.4:44467534-44467553 | None:intergenic | 55.0% | |
| CGAGTTTGGAGGGGAAGGAA+AGG | - | chr4.4:44463752-44463771 | MS.gene08707:intron | 55.0% | |
| CGATTGAGGAACCCGAGTTG+GGG | + | chr4.4:44465393-44465412 | None:intergenic | 55.0% | |
| GCACATCTCCCTTTCTCCGT+TGG | - | chr4.4:44465583-44465602 | MS.gene08707:intron | 55.0% | |
| GCGATTGAGGAACCCGAGTT+GGG | + | chr4.4:44465394-44465413 | None:intergenic | 55.0% | |
| GGACCTCGGTGGGAGTTTAA+TGG | - | chr4.4:44466650-44466669 | MS.gene08707:intron | 55.0% | |
| GGCTTCAAGCTATGGGACCT+CGG | - | chr4.4:44466636-44466655 | MS.gene08707:intron | 55.0% | |
| GTTGAGCGGGTGAAGCCTAT+TGG | - | chr4.4:44464634-44464653 | MS.gene08707:intron | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | - | chr4.4:44463747-44463766 | MS.gene08707:intron | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr4.4:44463766-44463747 | None:intergenic | 55.0% | |
| TCAAGCTATGGGACCTCGGT+GGG | - | chr4.4:44466640-44466659 | MS.gene08707:intron | 55.0% | |
| TGCAAAGGGCCCGTTTGGAT+TGG | + | chr4.4:44463463-44463482 | None:intergenic | 55.0% | |
| TGCGATTGAGGAACCCGAGT+TGG | + | chr4.4:44465395-44465414 | None:intergenic | 55.0% | |
| TTCAAGCTATGGGACCTCGG+TGG | - | chr4.4:44466639-44466658 | MS.gene08707:intron | 55.0% | |
| ! | ATGGGAGAGGAGGGCTTTAG+GGG | + | chr4.4:44464030-44464049 | None:intergenic | 55.0% |
| ! | GGCCGATTCTTCGTGATGAG+TGG | - | chr4.4:44465236-44465255 | MS.gene08707:CDS | 55.0% |
| ! | GGTGCTGAAGGTTCGTGGTA+GGG | - | chr4.4:44467539-44467558 | MS.gene08707:CDS | 55.0% |
| ! | TGGTGCTGAAGGTTCGTGGT+AGG | - | chr4.4:44467538-44467557 | MS.gene08707:CDS | 55.0% |
| !! | CAGTTGGTGCTGAAGGTTCG+TGG | - | chr4.4:44467534-44467553 | MS.gene08707:CDS | 55.0% |
| !!! | AGGAGGGTTTTGGGGGGTTT+TGG | + | chr4.4:44463946-44463965 | None:intergenic | 55.0% |
| !!! | AGGGTTTTGGGGGGTTTTGG+AGG | + | chr4.4:44463943-44463962 | None:intergenic | 55.0% |
| !!! | GGGTTTTGGGGGGTTTTGGA+GGG | + | chr4.4:44463942-44463961 | None:intergenic | 55.0% |
| CGAGTTTGGAGGGGAAGGGA+GGG | + | chr4.4:44464100-44464119 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr4.4:44464099-44464118 | None:intergenic | 60.0% | |
| GGTAAGGAACTCAGGCCAGC+AGG | - | chr4.4:44466999-44467018 | MS.gene08707:intron | 60.0% | |
| TACCTTGGCACGGTAGGCCT+TGG | - | chr4.4:44465071-44465090 | MS.gene08707:intron | 60.0% | |
| !! | TGGGAGAGGAGGGCTTTAGG+GGG | + | chr4.4:44464029-44464048 | None:intergenic | 60.0% |
| AGCCAAGGCCTACCGTGCCA+AGG | + | chr4.4:44465076-44465095 | None:intergenic | 65.0% | |
| AGGCGTCATGGGGGCTATCG+AGG | - | chr4.4:44466593-44466612 | MS.gene08707:intron | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | + | chr4.4:44464101-44464120 | None:intergenic | 65.0% | |
| GGAGACTTCCCAGTCCGGAG+TGG | + | chr4.4:44466496-44466515 | None:intergenic | 65.0% | |
| GGGAAGGGAGGGGAAGGCTT+GGG | + | chr4.4:44464089-44464108 | None:intergenic | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | + | chr4.4:44464095-44464114 | None:intergenic | 65.0% | |
| GGGGAAGGGAGGGGAAGGCT+TGG | + | chr4.4:44464090-44464109 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 44462941 | 44467559 | 44462941 | ID=MS.gene08707 |
| chr4.4 | mRNA | 44462941 | 44467559 | 44462941 | ID=MS.gene08707.t1;Parent=MS.gene08707 |
| chr4.4 | exon | 44467528 | 44467559 | 44467528 | ID=MS.gene08707.t1.exon1;Parent=MS.gene08707.t1 |
| chr4.4 | CDS | 44467528 | 44467559 | 44467528 | ID=cds.MS.gene08707.t1;Parent=MS.gene08707.t1 |
| chr4.4 | exon | 44467287 | 44467363 | 44467287 | ID=MS.gene08707.t1.exon2;Parent=MS.gene08707.t1 |
| chr4.4 | CDS | 44467287 | 44467363 | 44467287 | ID=cds.MS.gene08707.t1;Parent=MS.gene08707.t1 |
| chr4.4 | exon | 44465769 | 44465898 | 44465769 | ID=MS.gene08707.t1.exon3;Parent=MS.gene08707.t1 |
| chr4.4 | CDS | 44465769 | 44465898 | 44465769 | ID=cds.MS.gene08707.t1;Parent=MS.gene08707.t1 |
| chr4.4 | exon | 44465418 | 44465577 | 44465418 | ID=MS.gene08707.t1.exon4;Parent=MS.gene08707.t1 |
| chr4.4 | CDS | 44465418 | 44465577 | 44465418 | ID=cds.MS.gene08707.t1;Parent=MS.gene08707.t1 |
| chr4.4 | exon | 44465146 | 44465331 | 44465146 | ID=MS.gene08707.t1.exon5;Parent=MS.gene08707.t1 |
| chr4.4 | CDS | 44465146 | 44465331 | 44465146 | ID=cds.MS.gene08707.t1;Parent=MS.gene08707.t1 |
| chr4.4 | exon | 44462941 | 44463054 | 44462941 | ID=MS.gene08707.t1.exon6;Parent=MS.gene08707.t1 |
| chr4.4 | CDS | 44462941 | 44463054 | 44462941 | ID=cds.MS.gene08707.t1;Parent=MS.gene08707.t1 |
| Gene Sequence |
| Protein sequence |
