Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08961.t1 | AET04137.1 | 94.1 | 443 | 25 | 1 | 1 | 443 | 1 | 442 | 9.60E-185 | 656.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08961.t1 | G7LHU3 | 94.1 | 443 | 25 | 1 | 1 | 443 | 1 | 442 | 6.9e-185 | 656.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene08961 | 0.813328 | 2.71E-51 | -1.69E-46 |
| MS.gene049159 | MS.gene08961 | 0.835137 | 2.00E-56 | -1.69E-46 |
| MS.gene049254 | MS.gene08961 | 0.800433 | 1.44E-48 | -1.69E-46 |
| MS.gene049419 | MS.gene08961 | -0.810341 | 1.21E-50 | -1.69E-46 |
| MS.gene049452 | MS.gene08961 | 0.818256 | 2.16E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene08961 | 0.833209 | 6.08E-56 | -1.69E-46 |
| MS.gene050105 | MS.gene08961 | 0.807236 | 5.58E-50 | -1.69E-46 |
| MS.gene050273 | MS.gene08961 | 0.804273 | 2.34E-49 | -1.69E-46 |
| MS.gene050361 | MS.gene08961 | 0.801353 | 9.37E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene08961 | 0.802876 | 4.56E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene08961 | 0.821595 | 3.71E-53 | -1.69E-46 |
| MS.gene050689 | MS.gene08961 | 0.804471 | 2.13E-49 | -1.69E-46 |
| MS.gene050737 | MS.gene08961 | 0.823338 | 1.46E-53 | -1.69E-46 |
| MS.gene050826 | MS.gene08961 | 0.813402 | 2.61E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene08961 | 0.84967 | 2.79E-60 | -1.69E-46 |
| MS.gene051066 | MS.gene08961 | 0.800445 | 1.44E-48 | -1.69E-46 |
| MS.gene051198 | MS.gene08961 | 0.813746 | 2.19E-51 | -1.69E-46 |
| MS.gene051363 | MS.gene08961 | 0.81295 | 3.27E-51 | -1.69E-46 |
| MS.gene051365 | MS.gene08961 | 0.80339 | 3.57E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene08961 | 0.802983 | 4.33E-49 | -1.69E-46 |
| MS.gene051924 | MS.gene08961 | -0.814163 | 1.77E-51 | -1.69E-46 |
| MS.gene051926 | MS.gene08961 | -0.802234 | 6.18E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene08961 | 0.800919 | 1.15E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene08961 | 0.817932 | 2.55E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene08961 | 0.833725 | 4.52E-56 | -1.69E-46 |
| MS.gene052519 | MS.gene08961 | 0.841093 | 5.86E-58 | -1.69E-46 |
| MS.gene052674 | MS.gene08961 | 0.811579 | 6.52E-51 | -1.69E-46 |
| MS.gene052675 | MS.gene08961 | 0.813128 | 2.99E-51 | -1.69E-46 |
| MS.gene052677 | MS.gene08961 | 0.81236 | 4.41E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene08961 | 0.826677 | 2.38E-54 | -1.69E-46 |
| MS.gene053006 | MS.gene08961 | 0.804012 | 2.65E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene08961 | 0.845475 | 3.97E-59 | -1.69E-46 |
| MS.gene05350 | MS.gene08961 | 0.809163 | 2.17E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene08961 | 0.810313 | 1.23E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene08961 | 0.833984 | 3.90E-56 | -1.69E-46 |
| MS.gene05517 | MS.gene08961 | 0.816322 | 5.87E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene08961 | 0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene08961 | 0.807944 | 3.95E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene08961 | 0.82353 | 1.32E-53 | -1.69E-46 |
| MS.gene055841 | MS.gene08961 | 0.800373 | 1.49E-48 | -1.69E-46 |
| MS.gene055926 | MS.gene08961 | 0.801265 | 9.77E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene08961 | 0.832359 | 9.89E-56 | -1.69E-46 |
| MS.gene056595 | MS.gene08961 | 0.800589 | 1.34E-48 | -1.69E-46 |
| MS.gene056776 | MS.gene08961 | 0.818674 | 1.73E-52 | -1.69E-46 |
| MS.gene05690 | MS.gene08961 | 0.802547 | 5.33E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene08961 | 0.841828 | 3.75E-58 | -1.69E-46 |
| MS.gene057855 | MS.gene08961 | 0.825544 | 4.42E-54 | -1.69E-46 |
| MS.gene058008 | MS.gene08961 | 0.83798 | 3.77E-57 | -1.69E-46 |
| MS.gene058009 | MS.gene08961 | 0.849059 | 4.12E-60 | -1.69E-46 |
| MS.gene058010 | MS.gene08961 | 0.823457 | 1.37E-53 | -1.69E-46 |
| MS.gene058081 | MS.gene08961 | 0.805355 | 1.39E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene08961 | 0.803498 | 3.39E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene08961 | 0.824027 | 1.01E-53 | -1.69E-46 |
| MS.gene058781 | MS.gene08961 | 0.837486 | 5.05E-57 | -1.69E-46 |
| MS.gene058783 | MS.gene08961 | 0.857795 | 1.28E-62 | -1.69E-46 |
| MS.gene058979 | MS.gene08961 | 0.817779 | 2.76E-52 | -1.69E-46 |
| MS.gene059283 | MS.gene08961 | 0.824996 | 5.96E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene08961 | 0.84604 | 2.79E-59 | -1.69E-46 |
| MS.gene060322 | MS.gene08961 | 0.835375 | 1.74E-56 | -1.69E-46 |
| MS.gene06052 | MS.gene08961 | 0.826299 | 2.93E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene08961 | 0.806406 | 8.35E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene08961 | 0.856116 | 4.00E-62 | -1.69E-46 |
| MS.gene060935 | MS.gene08961 | 0.847414 | 1.17E-59 | -1.69E-46 |
| MS.gene060937 | MS.gene08961 | 0.831369 | 1.74E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08961.t1 | MTR_8g085190 | 97.065 | 443 | 12 | 1 | 1 | 443 | 1 | 442 | 0.0 | 873 |
| MS.gene08961.t1 | MTR_5g079680 | 54.918 | 122 | 46 | 1 | 5 | 126 | 2 | 114 | 3.42e-41 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 163 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGTCCATTTCTTCCTTCT+TGG | 0.160653 | 4.4:+14768870 | None:intergenic |
| GATAATGAGGTGATAGGTTT+AGG | 0.216881 | 4.4:-14768315 | MS.gene08961:CDS |
| CAAAATTTGCATCATGTAAA+TGG | 0.242690 | 4.4:-14767637 | MS.gene08961:CDS |
| TTTGGGCATATGGGTCATTC+AGG | 0.261206 | 4.4:-14768378 | MS.gene08961:CDS |
| GAAGATCAATTCATTGTTGA+TGG | 0.290026 | 4.4:-14767574 | MS.gene08961:CDS |
| TTTCACCATACTTGTCGATT+AGG | 0.298708 | 4.4:+14768832 | None:intergenic |
| TATGGCTGAGTTTGGGCATA+TGG | 0.306433 | 4.4:-14768388 | MS.gene08961:CDS |
| TTCACCATACTTGTCGATTA+GGG | 0.311119 | 4.4:+14768833 | None:intergenic |
| ATAATGAGGTGATAGGTTTA+GGG | 0.324740 | 4.4:-14768314 | MS.gene08961:CDS |
| GGAAAAGGAGAGGGAGGAAA+GGG | 0.326049 | 4.4:-14767998 | MS.gene08961:CDS |
| GCATCATTTGTGAAAGATAA+TGG | 0.330244 | 4.4:+14767659 | None:intergenic |
| TTCCTTCTTGGAGGAATCAT+TGG | 0.332591 | 4.4:+14768882 | None:intergenic |
| AGGTTTAGGGTTTGAGTATG+AGG | 0.332722 | 4.4:-14768301 | MS.gene08961:CDS |
| GGAATGGATATGGCTGAGTT+TGG | 0.339401 | 4.4:-14768396 | MS.gene08961:CDS |
| AAATCAGCACCGAGCAGAAA+TGG | 0.353850 | 4.4:-14767800 | MS.gene08961:CDS |
| GGAGATCGAGATGGGTTTCT+TGG | 0.355872 | 4.4:-14768432 | MS.gene08961:CDS |
| GGGTTTCTTGGTAGTGGTGG+TGG | 0.361161 | 4.4:-14768420 | MS.gene08961:CDS |
| GGGAAAAGGAGAGGGAGGAA+AGG | 0.364519 | 4.4:-14767999 | MS.gene08961:CDS |
| GATTGCTTGTTATGTGAATT+CGG | 0.367637 | 4.4:-14768754 | MS.gene08961:CDS |
| GGTGGAAATAATGAGTTGTT+AGG | 0.371046 | 4.4:-14768474 | MS.gene08961:CDS |
| ATCCGATAGGCCAGCAGGTT+GGG | 0.386802 | 4.4:+14767699 | None:intergenic |
| GGTGATGTTGCACTTGTTGT+TGG | 0.387225 | 4.4:-14768516 | MS.gene08961:CDS |
| GTCCATTTCTTCCTTCTTGG+AGG | 0.388092 | 4.4:+14768873 | None:intergenic |
| TAATGAGTTGTTAGGATTTG+AGG | 0.389617 | 4.4:-14768466 | MS.gene08961:CDS |
| GGAGTTGATAATGAGGTGAT+AGG | 0.395706 | 4.4:-14768321 | MS.gene08961:CDS |
| CTCATACACATAACCATTCT+CGG | 0.397651 | 4.4:+14768227 | None:intergenic |
| AAAGGGAGCGCGAGAGGCAG+AGG | 0.405523 | 4.4:-14768065 | MS.gene08961:CDS |
| TGGTGGTGGAGGAATGGATA+TGG | 0.405888 | 4.4:-14768406 | MS.gene08961:CDS |
| ATGGGAGTAGTGAGTTTGAT+TGG | 0.409811 | 4.4:-14768590 | MS.gene08961:CDS |
| AGGATTTGAGGACGGCGGTC+GGG | 0.412025 | 4.4:-14768454 | MS.gene08961:CDS |
| TTCCTCCAAGAAGGAAGAAA+TGG | 0.413290 | 4.4:-14768875 | MS.gene08961:CDS |
| GTTGGGGCAGTTGAGGGAAA+TGG | 0.416951 | 4.4:-14768115 | MS.gene08961:CDS |
| GGATGGAGGGGTTAACTCAT+TGG | 0.420218 | 4.4:-14768569 | MS.gene08961:CDS |
| GGGAAGAGAGAATGAATTGC+AGG | 0.432882 | 4.4:-14767858 | MS.gene08961:CDS |
| AAAACCCTAATCGACAAGTA+TGG | 0.433688 | 4.4:-14768837 | MS.gene08961:CDS |
| TGGTTATGTGTATGAGGAAG+GGG | 0.434586 | 4.4:-14768220 | MS.gene08961:CDS |
| GAGAATGAATTGCAGGAGGC+TGG | 0.436328 | 4.4:-14767851 | MS.gene08961:CDS |
| GGGAGCGCGAGAGGCAGAGG+AGG | 0.437021 | 4.4:-14768062 | MS.gene08961:CDS |
| GGAGGAAAGGGAGAAGGAGA+GGG | 0.439243 | 4.4:-14767986 | MS.gene08961:CDS |
| GGGAGGAAAGGGAGAAGGAG+AGG | 0.439405 | 4.4:-14767987 | MS.gene08961:CDS |
| AATCGACAAGTATGGTGAAA+TGG | 0.441441 | 4.4:-14768829 | MS.gene08961:CDS |
| AAGGGAGAAGGAGAGGGAAA+AGG | 0.441479 | 4.4:-14767980 | MS.gene08961:CDS |
| TATGGGTCATTCAGGGGATG+GGG | 0.445632 | 4.4:-14768370 | MS.gene08961:CDS |
| TTTCTTGGTAGTGGTGGTGG+AGG | 0.446839 | 4.4:-14768417 | MS.gene08961:CDS |
| CAGTGGACTGCCCAACCTGC+TGG | 0.450699 | 4.4:-14767709 | MS.gene08961:CDS |
| GCACTTGTTGTTGGTGGTGG+TGG | 0.452572 | 4.4:-14768507 | MS.gene08961:CDS |
| GCGATCCGGTGGTTTATCCT+TGG | 0.454110 | 4.4:-14768719 | MS.gene08961:CDS |
| GAATGGATATGGCTGAGTTT+GGG | 0.456485 | 4.4:-14768395 | MS.gene08961:CDS |
| AGAAGGAGAGGGAAAAGGTT+AGG | 0.456908 | 4.4:-14767975 | MS.gene08961:CDS |
| TGCCCAACCTGCTGGCCTAT+CGG | 0.458375 | 4.4:-14767701 | MS.gene08961:CDS |
| CGAGATGGGTTTCTTGGTAG+TGG | 0.459697 | 4.4:-14768426 | MS.gene08961:CDS |
| GGAGAGGGAGGAAAGGGAGA+AGG | 0.461630 | 4.4:-14767992 | MS.gene08961:CDS |
| GCGAGAATATACCGAGCAAT+TGG | 0.465079 | 4.4:+14767731 | None:intergenic |
| TTTCCCTCAACTGCCCCAAC+TGG | 0.468444 | 4.4:+14768118 | None:intergenic |
| GGGAAAAGGTTAGGAGGCAA+AGG | 0.469653 | 4.4:-14767966 | MS.gene08961:CDS |
| AAGAAGAGGAAGGTTGTGAA+GGG | 0.470752 | 4.4:-14768174 | MS.gene08961:CDS |
| GAGATTTGAGGAGAGGGAAA+AGG | 0.471046 | 4.4:-14768013 | MS.gene08961:CDS |
| CATGAAGACACTAGGGTTGA+GGG | 0.472525 | 4.4:-14767607 | MS.gene08961:CDS |
| GGTGTCTGAGTGGGAAGCTA+TGG | 0.472685 | 4.4:-14767944 | MS.gene08961:CDS |
| TTTATCCTTGGCAATGGAGT+TGG | 0.472751 | 4.4:-14768707 | MS.gene08961:CDS |
| GGATTTGAGGACGGCGGTCG+GGG | 0.474393 | 4.4:-14768453 | MS.gene08961:CDS |
| TTGAGTATGAGGCTGAAGAT+GGG | 0.475420 | 4.4:-14768290 | MS.gene08961:CDS |
| GGAGAGTTTGCGAGCAGAGT+GGG | 0.476865 | 4.4:-14768040 | MS.gene08961:CDS |
| TAACCAGTTGGGGCAGTTGA+GGG | 0.478194 | 4.4:-14768121 | MS.gene08961:CDS |
| GGGAAAAGAGATTTGAGGAG+AGG | 0.478354 | 4.4:-14768020 | MS.gene08961:CDS |
| GTTGCACTTGTTGTTGGTGG+TGG | 0.479517 | 4.4:-14768510 | MS.gene08961:CDS |
| TGGTAGTGGTGGTGGAGGAA+TGG | 0.479826 | 4.4:-14768412 | MS.gene08961:CDS |
| TTTGAGTATGAGGCTGAAGA+TGG | 0.480668 | 4.4:-14768291 | MS.gene08961:CDS |
| GGAGAAGGAAAATGAAGATA+AGG | 0.482423 | 4.4:-14767923 | MS.gene08961:CDS |
| ATATGGGTCATTCAGGGGAT+GGG | 0.484086 | 4.4:-14768371 | MS.gene08961:CDS |
| TGAATTGCAGGAGGCTGGAA+TGG | 0.484463 | 4.4:-14767846 | MS.gene08961:CDS |
| GGCGGTCGGGGAGATCGAGA+TGG | 0.484565 | 4.4:-14768441 | MS.gene08961:CDS |
| AATCAGCACCGAGCAGAAAT+GGG | 0.488690 | 4.4:-14767799 | MS.gene08961:CDS |
| ATGGCTGAGTTTGGGCATAT+GGG | 0.491211 | 4.4:-14768387 | MS.gene08961:CDS |
| GGTTCATCATGTTCGCGATC+CGG | 0.491682 | 4.4:-14768733 | MS.gene08961:CDS |
| TTTCTGGTGGAGAGTGTGAT+GGG | 0.492044 | 4.4:-14768608 | MS.gene08961:CDS |
| GAAGAAGAGGAAGGTTGTGA+AGG | 0.494715 | 4.4:-14768175 | MS.gene08961:CDS |
| AGTTGATTCGTGAGAGGGAA+CGG | 0.495920 | 4.4:-14767879 | MS.gene08961:CDS |
| GTTGATTCGTGAGAGGGAAC+GGG | 0.496093 | 4.4:-14767878 | MS.gene08961:CDS |
| TATGAGGCATCAGTATTTGT+TGG | 0.501879 | 4.4:-14768658 | MS.gene08961:CDS |
| GGAAAAGAGATTTGAGGAGA+GGG | 0.501904 | 4.4:-14768019 | MS.gene08961:CDS |
| AGTGAGTTTGATTGGATGGA+GGG | 0.504786 | 4.4:-14768582 | MS.gene08961:CDS |
| CGGTGGTTTATCCTTGGCAA+TGG | 0.505813 | 4.4:-14768713 | MS.gene08961:CDS |
| TCATGAAGACACTAGGGTTG+AGG | 0.507498 | 4.4:-14767608 | MS.gene08961:CDS |
| GCACTTGTCCCATTTCTGCT+CGG | 0.509836 | 4.4:+14767791 | None:intergenic |
| TGAGGAGAGGGAAAAGGAGA+GGG | 0.511422 | 4.4:-14768007 | MS.gene08961:CDS |
| TTGAGCAGCGCGAGATGGAA+AGG | 0.511596 | 4.4:-14768083 | MS.gene08961:CDS |
| CTAACCAGTTGGGGCAGTTG+AGG | 0.512105 | 4.4:-14768122 | MS.gene08961:CDS |
| AATGGTTATGTGTATGAGGA+AGG | 0.513055 | 4.4:-14768222 | MS.gene08961:CDS |
| GAATTCACATAACAAGCAAT+CGG | 0.514657 | 4.4:+14768756 | None:intergenic |
| AGTTGAGGGAAATGGAGGTT+CGG | 0.515157 | 4.4:-14768107 | MS.gene08961:CDS |
| AGATGGAAAGGGAGCGCGAG+AGG | 0.523211 | 4.4:-14768071 | MS.gene08961:CDS |
| AGGAAAATGAAGATAAGGAA+AGG | 0.524324 | 4.4:-14767918 | MS.gene08961:CDS |
| AGGAGAGGGAAAAGGTTAGG+AGG | 0.526606 | 4.4:-14767972 | MS.gene08961:CDS |
| TAGGATTTGAGGACGGCGGT+CGG | 0.530941 | 4.4:-14768455 | MS.gene08961:CDS |
| GTGAAGCAGAAGATCAAGAA+AGG | 0.531659 | 4.4:-14768636 | MS.gene08961:CDS |
| TTGGGCATATGGGTCATTCA+GGG | 0.531915 | 4.4:-14768377 | MS.gene08961:CDS |
| CATATGGGTCATTCAGGGGA+TGG | 0.533007 | 4.4:-14768372 | MS.gene08961:CDS |
| CTACAAAGGTGCAGAATATG+AGG | 0.533670 | 4.4:-14768674 | MS.gene08961:CDS |
| TGAAGCAGAAGATCAAGAAA+GGG | 0.534144 | 4.4:-14768635 | MS.gene08961:CDS |
| AGGAGGAGTTGATTCGTGAG+AGG | 0.535605 | 4.4:-14767885 | MS.gene08961:CDS |
| GAGGAAGGTTGTGAAGGGGA+TGG | 0.536250 | 4.4:-14768169 | MS.gene08961:CDS |
| TCGGTTTGAGCAGCGCGAGA+TGG | 0.536873 | 4.4:-14768088 | MS.gene08961:CDS |
| GATCCGATAGGCCAGCAGGT+TGG | 0.537517 | 4.4:+14767698 | None:intergenic |
| GCATTGTTCATGAAGACACT+AGG | 0.537607 | 4.4:-14767615 | MS.gene08961:CDS |
| AAATGGGACAAGTGCAGACT+CGG | 0.539639 | 4.4:-14767783 | MS.gene08961:CDS |
| ATGGTTATGTGTATGAGGAA+GGG | 0.542891 | 4.4:-14768221 | MS.gene08961:CDS |
| ATGAGAGAAGATGCCGAGAA+TGG | 0.544829 | 4.4:-14768240 | MS.gene08961:CDS |
| GATGTTGCACTTGTTGTTGG+TGG | 0.545721 | 4.4:-14768513 | MS.gene08961:CDS |
| GGAAAAGGTTAGGAGGCAAA+GGG | 0.546585 | 4.4:-14767965 | MS.gene08961:CDS |
| CGAGAATGGTTATGTGTATG+AGG | 0.549700 | 4.4:-14768226 | MS.gene08961:CDS |
| GAATTTGAAGAAGAAGAGGA+AGG | 0.550240 | 4.4:-14768184 | MS.gene08961:CDS |
| GGAGCGCGAGAGGCAGAGGA+GGG | 0.550973 | 4.4:-14768061 | MS.gene08961:CDS |
| AGAAGAGGAAGGTTGTGAAG+GGG | 0.552071 | 4.4:-14768173 | MS.gene08961:CDS |
| TAAGGAAAGGAAAAGAAGAG+AGG | 0.554492 | 4.4:-14767905 | MS.gene08961:CDS |
| GGTCATTCAGGGGATGGGGA+TGG | 0.556528 | 4.4:-14768366 | MS.gene08961:CDS |
| TAGTGAGTTTGATTGGATGG+AGG | 0.557266 | 4.4:-14768583 | MS.gene08961:CDS |
| GGAGGCTGGAATGGAAGAAG+AGG | 0.557572 | 4.4:-14767837 | MS.gene08961:CDS |
| GCGGTCGGGGAGATCGAGAT+GGG | 0.559848 | 4.4:-14768440 | MS.gene08961:CDS |
| TTGAGGAGAGGGAAAAGGAG+AGG | 0.560102 | 4.4:-14768008 | MS.gene08961:CDS |
| GTATGATCCGATAGGCCAGC+AGG | 0.563059 | 4.4:+14767694 | None:intergenic |
| TATGAGGAAGGGGAAGTGAC+GGG | 0.564004 | 4.4:-14768210 | MS.gene08961:CDS |
| GTATGAGGAAGGGGAAGTGA+CGG | 0.565215 | 4.4:-14768211 | MS.gene08961:CDS |
| GGAGGAGTTGATTCGTGAGA+GGG | 0.566702 | 4.4:-14767884 | MS.gene08961:CDS |
| GAGTAGTGAGTTTGATTGGA+TGG | 0.566726 | 4.4:-14768586 | MS.gene08961:CDS |
| TTGGAAAGATGTTTCTACAA+AGG | 0.568440 | 4.4:-14768688 | MS.gene08961:CDS |
| GGAGAGGGAAAAGGAGAGGG+AGG | 0.569831 | 4.4:-14768004 | MS.gene08961:CDS |
| ATGAAGACACTAGGGTTGAG+GGG | 0.570754 | 4.4:-14767606 | MS.gene08961:CDS |
| GATGGGTTTCTTGGTAGTGG+TGG | 0.578171 | 4.4:-14768423 | MS.gene08961:CDS |
| GGAAAGGAAAAGAAGAGAGG+AGG | 0.579942 | 4.4:-14767902 | MS.gene08961:CDS |
| GGTGGTGGTGGTACTGAGCA+CGG | 0.580119 | 4.4:-14768495 | MS.gene08961:CDS |
| GTTCGAATTTGAAGAAGAAG+AGG | 0.584176 | 4.4:-14768188 | MS.gene08961:CDS |
| AATCTTAGCAGCCAATTGCT+CGG | 0.585356 | 4.4:-14767742 | MS.gene08961:CDS |
| TGAGCAGCGCGAGATGGAAA+GGG | 0.586120 | 4.4:-14768082 | MS.gene08961:CDS |
| TGGGCATATGGGTCATTCAG+GGG | 0.587540 | 4.4:-14768376 | MS.gene08961:CDS |
| TGAGTATGAGGCTGAAGATG+GGG | 0.591979 | 4.4:-14768289 | MS.gene08961:CDS |
| AGGGGATGGAAAAGAAGATG+TGG | 0.593535 | 4.4:-14768155 | MS.gene08961:CDS |
| GTGAGTTTGATTGGATGGAG+GGG | 0.594823 | 4.4:-14768581 | MS.gene08961:CDS |
| GAGGCAAAGGGTGTCTGAGT+GGG | 0.595234 | 4.4:-14767953 | MS.gene08961:CDS |
| TGCCAATGATTCCTCCAAGA+AGG | 0.595383 | 4.4:-14768884 | None:intergenic |
| CATTGTTCATGAAGACACTA+GGG | 0.596869 | 4.4:-14767614 | MS.gene08961:CDS |
| GGGGCAGTTGAGGGAAATGG+AGG | 0.604535 | 4.4:-14768112 | MS.gene08961:CDS |
| CATCTTCGCGAGAGAACCAT+CGG | 0.605545 | 4.4:+14768803 | None:intergenic |
| TCTTTCCAACTCCATTGCCA+AGG | 0.610858 | 4.4:+14768702 | None:intergenic |
| TCATCATGTTCGCGATCCGG+TGG | 0.612918 | 4.4:-14768730 | MS.gene08961:CDS |
| TATGGTGAAATGGTTACCGA+TGG | 0.622176 | 4.4:-14768819 | MS.gene08961:CDS |
| TGCTCGGTATATTCTCGCAG+TGG | 0.627720 | 4.4:-14767726 | MS.gene08961:CDS |
| GGAGGCAAAGGGTGTCTGAG+TGG | 0.630414 | 4.4:-14767954 | MS.gene08961:CDS |
| TGAGTGGGAAGCTATGGAGA+AGG | 0.634490 | 4.4:-14767938 | MS.gene08961:CDS |
| GGATGGAAAAGAAGATGTGG+AGG | 0.640165 | 4.4:-14768152 | MS.gene08961:CDS |
| AGAGTGGGAAAAGAGATTTG+AGG | 0.643952 | 4.4:-14768025 | MS.gene08961:CDS |
| TGAAGACACTAGGGTTGAGG+GGG | 0.643955 | 4.4:-14767605 | MS.gene08961:CDS |
| TAGCACTAGTATGATCCGAT+AGG | 0.648983 | 4.4:+14767686 | None:intergenic |
| CATTGCCAAGGATAAACCAC+CGG | 0.650532 | 4.4:+14768714 | None:intergenic |
| GAAGCAGAAGATCAAGAAAG+GGG | 0.662267 | 4.4:-14768634 | MS.gene08961:CDS |
| GAGTTGTTAGGATTTGAGGA+CGG | 0.663894 | 4.4:-14768462 | MS.gene08961:CDS |
| GGGAGAGTTTGCGAGCAGAG+TGG | 0.666790 | 4.4:-14768041 | MS.gene08961:CDS |
| AAGAGAGAATGAATTGCAGG+AGG | 0.671244 | 4.4:-14767855 | MS.gene08961:CDS |
| GTATGAGGCTGAAGATGGGG+AGG | 0.684362 | 4.4:-14768286 | MS.gene08961:CDS |
| TATGGATGGAGTTGATAATG+AGG | 0.685698 | 4.4:-14768328 | MS.gene08961:CDS |
| GATGGAAAAGAAGATGTGGA+GGG | 0.695627 | 4.4:-14768151 | MS.gene08961:CDS |
| TTGTTAGGATTTGAGGACGG+CGG | 0.698283 | 4.4:-14768459 | MS.gene08961:CDS |
| GGTGGTGGTACTGAGCACGG+TGG | 0.808285 | 4.4:-14768492 | MS.gene08961:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CAAAATTTGCATCATGTAAA+TGG | - | chr4.4:14768812-14768831 | MS.gene08961:CDS | 25.0% |
| !! | GTCTAATTTTCTTAGGTATA+AGG | - | chr4.4:14767902-14767921 | MS.gene08961:CDS | 25.0% |
| AGGAAAATGAAGATAAGGAA+AGG | - | chr4.4:14768531-14768550 | MS.gene08961:CDS | 30.0% | |
| ATAATGAGGTGATAGGTTTA+GGG | - | chr4.4:14768135-14768154 | MS.gene08961:CDS | 30.0% | |
| GAAGATCAATTCATTGTTGA+TGG | - | chr4.4:14768875-14768894 | MS.gene08961:CDS | 30.0% | |
| GAATTCACATAACAAGCAAT+CGG | + | chr4.4:14767696-14767715 | None:intergenic | 30.0% | |
| GCATCATTTGTGAAAGATAA+TGG | + | chr4.4:14768793-14768812 | None:intergenic | 30.0% | |
| TAATGAGTTGTTAGGATTTG+AGG | - | chr4.4:14767983-14768002 | MS.gene08961:CDS | 30.0% | |
| ! | CTTAGGTATAAGGAAGTTTT+TGG | - | chr4.4:14767912-14767931 | MS.gene08961:CDS | 30.0% |
| ! | TTGGAAAGATGTTTCTACAA+AGG | - | chr4.4:14767761-14767780 | MS.gene08961:CDS | 30.0% |
| !! | CTCATTGGTCTAATTTTCTT+AGG | - | chr4.4:14767895-14767914 | MS.gene08961:CDS | 30.0% |
| !! | GATTGCTTGTTATGTGAATT+CGG | - | chr4.4:14767695-14767714 | MS.gene08961:CDS | 30.0% |
| !! | TGAATTTTAATGGGAATGGA+GGG | - | chr4.4:14768186-14768205 | MS.gene08961:CDS | 30.0% |
| AAAACCCTAATCGACAAGTA+TGG | - | chr4.4:14767612-14767631 | MS.gene08961:CDS | 35.0% | |
| AATCGACAAGTATGGTGAAA+TGG | - | chr4.4:14767620-14767639 | MS.gene08961:CDS | 35.0% | |
| AATGGTTATGTGTATGAGGA+AGG | - | chr4.4:14768227-14768246 | MS.gene08961:CDS | 35.0% | |
| ATGGTTATGTGTATGAGGAA+GGG | - | chr4.4:14768228-14768247 | MS.gene08961:CDS | 35.0% | |
| CATTGTTCATGAAGACACTA+GGG | - | chr4.4:14768835-14768854 | MS.gene08961:CDS | 35.0% | |
| CTCATACACATAACCATTCT+CGG | + | chr4.4:14768225-14768244 | None:intergenic | 35.0% | |
| GAATTTGAAGAAGAAGAGGA+AGG | - | chr4.4:14768265-14768284 | MS.gene08961:CDS | 35.0% | |
| GATAATGAGGTGATAGGTTT+AGG | - | chr4.4:14768134-14768153 | MS.gene08961:CDS | 35.0% | |
| GGAGAAGGAAAATGAAGATA+AGG | - | chr4.4:14768526-14768545 | MS.gene08961:CDS | 35.0% | |
| GGTGGAAATAATGAGTTGTT+AGG | - | chr4.4:14767975-14767994 | MS.gene08961:CDS | 35.0% | |
| GTTCGAATTTGAAGAAGAAG+AGG | - | chr4.4:14768261-14768280 | MS.gene08961:CDS | 35.0% | |
| TAAGGAAAGGAAAAGAAGAG+AGG | - | chr4.4:14768544-14768563 | MS.gene08961:CDS | 35.0% | |
| TGAAGCAGAAGATCAAGAAA+GGG | - | chr4.4:14767814-14767833 | MS.gene08961:CDS | 35.0% | |
| ! | TATGAGGCATCAGTATTTGT+TGG | - | chr4.4:14767791-14767810 | MS.gene08961:CDS | 35.0% |
| ! | TTCACCATACTTGTCGATTA+GGG | + | chr4.4:14767619-14767638 | None:intergenic | 35.0% |
| ! | TTTCACCATACTTGTCGATT+AGG | + | chr4.4:14767620-14767639 | None:intergenic | 35.0% |
| !! | ATGGGGAGGTGAATTTTAAT+GGG | - | chr4.4:14768177-14768196 | MS.gene08961:CDS | 35.0% |
| !! | GAGGTGAATTTTAATGGGAA+TGG | - | chr4.4:14768182-14768201 | MS.gene08961:CDS | 35.0% |
| !! | GTGAATTTTAATGGGAATGG+AGG | - | chr4.4:14768185-14768204 | MS.gene08961:CDS | 35.0% |
| !! | TATGGATGGAGTTGATAATG+AGG | - | chr4.4:14768121-14768140 | MS.gene08961:CDS | 35.0% |
| AAGAAGAGGAAGGTTGTGAA+GGG | - | chr4.4:14768275-14768294 | MS.gene08961:CDS | 40.0% | |
| AAGAGAGAATGAATTGCAGG+AGG | - | chr4.4:14768594-14768613 | MS.gene08961:CDS | 40.0% | |
| AATCTTAGCAGCCAATTGCT+CGG | - | chr4.4:14768707-14768726 | MS.gene08961:CDS | 40.0% | |
| AGAGTGGGAAAAGAGATTTG+AGG | - | chr4.4:14768424-14768443 | MS.gene08961:CDS | 40.0% | |
| AGTGAGTTTGATTGGATGGA+GGG | - | chr4.4:14767867-14767886 | MS.gene08961:CDS | 40.0% | |
| ATGGGAGTAGTGAGTTTGAT+TGG | - | chr4.4:14767859-14767878 | MS.gene08961:CDS | 40.0% | |
| CGAGAATGGTTATGTGTATG+AGG | - | chr4.4:14768223-14768242 | MS.gene08961:CDS | 40.0% | |
| GAAGCAGAAGATCAAGAAAG+GGG | - | chr4.4:14767815-14767834 | MS.gene08961:CDS | 40.0% | |
| GAATGGATATGGCTGAGTTT+GGG | - | chr4.4:14768054-14768073 | MS.gene08961:CDS | 40.0% | |
| GAGTAGTGAGTTTGATTGGA+TGG | - | chr4.4:14767863-14767882 | MS.gene08961:CDS | 40.0% | |
| GAGTTGTTAGGATTTGAGGA+CGG | - | chr4.4:14767987-14768006 | MS.gene08961:CDS | 40.0% | |
| GATGGAAAAGAAGATGTGGA+GGG | - | chr4.4:14768298-14768317 | MS.gene08961:CDS | 40.0% | |
| GCATTGTTCATGAAGACACT+AGG | - | chr4.4:14768834-14768853 | MS.gene08961:CDS | 40.0% | |
| GGAAAAGAGATTTGAGGAGA+GGG | - | chr4.4:14768430-14768449 | MS.gene08961:CDS | 40.0% | |
| GTGAAGCAGAAGATCAAGAA+AGG | - | chr4.4:14767813-14767832 | MS.gene08961:CDS | 40.0% | |
| TAGCACTAGTATGATCCGAT+AGG | + | chr4.4:14768766-14768785 | None:intergenic | 40.0% | |
| TAGTGAGTTTGATTGGATGG+AGG | - | chr4.4:14767866-14767885 | MS.gene08961:CDS | 40.0% | |
| TATGGTGAAATGGTTACCGA+TGG | - | chr4.4:14767630-14767649 | MS.gene08961:CDS | 40.0% | |
| TCAGTCCATTTCTTCCTTCT+TGG | + | chr4.4:14767582-14767601 | None:intergenic | 40.0% | |
| TGGTTATGTGTATGAGGAAG+GGG | - | chr4.4:14768229-14768248 | MS.gene08961:CDS | 40.0% | |
| TTCCTCCAAGAAGGAAGAAA+TGG | - | chr4.4:14767574-14767593 | MS.gene08961:CDS | 40.0% | |
| TTGAGTATGAGGCTGAAGAT+GGG | - | chr4.4:14768159-14768178 | MS.gene08961:CDS | 40.0% | |
| TTTATCCTTGGCAATGGAGT+TGG | - | chr4.4:14767742-14767761 | MS.gene08961:CDS | 40.0% | |
| TTTGAGTATGAGGCTGAAGA+TGG | - | chr4.4:14768158-14768177 | MS.gene08961:CDS | 40.0% | |
| ! | AGGGTTTTTGCTAACCAGTT+GGG | - | chr4.4:14768317-14768336 | MS.gene08961:CDS | 40.0% |
| ! | AGGTTTAGGGTTTGAGTATG+AGG | - | chr4.4:14768148-14768167 | MS.gene08961:CDS | 40.0% |
| ! | ATCAAGAAAGGGGAGTTTTC+TGG | - | chr4.4:14767825-14767844 | MS.gene08961:CDS | 40.0% |
| ! | CTACAAAGGTGCAGAATATG+AGG | - | chr4.4:14767775-14767794 | MS.gene08961:CDS | 40.0% |
| ! | GATGGGGAGGTGAATTTTAA+TGG | - | chr4.4:14768176-14768195 | MS.gene08961:CDS | 40.0% |
| !! | GGAGTTGATAATGAGGTGAT+AGG | - | chr4.4:14768128-14768147 | MS.gene08961:CDS | 40.0% |
| AAATGGGACAAGTGCAGACT+CGG | - | chr4.4:14768666-14768685 | MS.gene08961:CDS | 45.0% | |
| AGAAGAGGAAGGTTGTGAAG+GGG | - | chr4.4:14768276-14768295 | MS.gene08961:CDS | 45.0% | |
| AGAAGGAGAGGGAAAAGGTT+AGG | - | chr4.4:14768474-14768493 | MS.gene08961:CDS | 45.0% | |
| AGGGGATGGAAAAGAAGATG+TGG | - | chr4.4:14768294-14768313 | MS.gene08961:CDS | 45.0% | |
| AGTTGAGGGAAATGGAGGTT+CGG | - | chr4.4:14768342-14768361 | MS.gene08961:CDS | 45.0% | |
| ATATGGGTCATTCAGGGGAT+GGG | - | chr4.4:14768078-14768097 | MS.gene08961:CDS | 45.0% | |
| ATGAAGACACTAGGGTTGAG+GGG | - | chr4.4:14768843-14768862 | MS.gene08961:CDS | 45.0% | |
| ATGAGAGAAGATGCCGAGAA+TGG | - | chr4.4:14768209-14768228 | MS.gene08961:CDS | 45.0% | |
| ATGGCTGAGTTTGGGCATAT+GGG | - | chr4.4:14768062-14768081 | MS.gene08961:CDS | 45.0% | |
| CATGAAGACACTAGGGTTGA+GGG | - | chr4.4:14768842-14768861 | MS.gene08961:CDS | 45.0% | |
| CATTGCCAAGGATAAACCAC+CGG | + | chr4.4:14767738-14767757 | None:intergenic | 45.0% | |
| GAAGAAGAGGAAGGTTGTGA+AGG | - | chr4.4:14768274-14768293 | MS.gene08961:CDS | 45.0% | |
| GAGATTTGAGGAGAGGGAAA+AGG | - | chr4.4:14768436-14768455 | MS.gene08961:CDS | 45.0% | |
| GCGAGAATATACCGAGCAAT+TGG | + | chr4.4:14768721-14768740 | None:intergenic | 45.0% | |
| GGAAAAGGTTAGGAGGCAAA+GGG | - | chr4.4:14768484-14768503 | MS.gene08961:CDS | 45.0% | |
| GGAAAGGAAAAGAAGAGAGG+AGG | - | chr4.4:14768547-14768566 | MS.gene08961:CDS | 45.0% | |
| GGAATGGATATGGCTGAGTT+TGG | - | chr4.4:14768053-14768072 | MS.gene08961:CDS | 45.0% | |
| GGATGGAAAAGAAGATGTGG+AGG | - | chr4.4:14768297-14768316 | MS.gene08961:CDS | 45.0% | |
| GGGAAAAGAGATTTGAGGAG+AGG | - | chr4.4:14768429-14768448 | MS.gene08961:CDS | 45.0% | |
| GGGAAGAGAGAATGAATTGC+AGG | - | chr4.4:14768591-14768610 | MS.gene08961:CDS | 45.0% | |
| GTCCATTTCTTCCTTCTTGG+AGG | + | chr4.4:14767579-14767598 | None:intergenic | 45.0% | |
| GTGAGTTTGATTGGATGGAG+GGG | - | chr4.4:14767868-14767887 | MS.gene08961:CDS | 45.0% | |
| TATGGCTGAGTTTGGGCATA+TGG | - | chr4.4:14768061-14768080 | MS.gene08961:CDS | 45.0% | |
| TCATGAAGACACTAGGGTTG+AGG | - | chr4.4:14768841-14768860 | MS.gene08961:CDS | 45.0% | |
| TCTTTCCAACTCCATTGCCA+AGG | + | chr4.4:14767750-14767769 | None:intergenic | 45.0% | |
| TGAGTATGAGGCTGAAGATG+GGG | - | chr4.4:14768160-14768179 | MS.gene08961:CDS | 45.0% | |
| TTGGGCATATGGGTCATTCA+GGG | - | chr4.4:14768072-14768091 | MS.gene08961:CDS | 45.0% | |
| TTGTTAGGATTTGAGGACGG+CGG | - | chr4.4:14767990-14768009 | MS.gene08961:CDS | 45.0% | |
| TTTGGGCATATGGGTCATTC+AGG | - | chr4.4:14768071-14768090 | MS.gene08961:CDS | 45.0% | |
| ! | AAATCAGCACCGAGCAGAAA+TGG | - | chr4.4:14768649-14768668 | MS.gene08961:CDS | 45.0% |
| ! | AAGAAAGGGGAGTTTTCTGG+TGG | - | chr4.4:14767828-14767847 | MS.gene08961:CDS | 45.0% |
| ! | AATCAGCACCGAGCAGAAAT+GGG | - | chr4.4:14768650-14768669 | MS.gene08961:CDS | 45.0% |
| ! | GAGGGTTTTTGCTAACCAGT+TGG | - | chr4.4:14768316-14768335 | MS.gene08961:CDS | 45.0% |
| ! | GATTTTGCGGTTGCTATGGA+TGG | - | chr4.4:14768107-14768126 | MS.gene08961:CDS | 45.0% |
| ! | GGGTTTTTGCTAACCAGTTG+GGG | - | chr4.4:14768318-14768337 | MS.gene08961:CDS | 45.0% |
| ! | TGGTGATTTTGCGGTTGCTA+TGG | - | chr4.4:14768103-14768122 | MS.gene08961:CDS | 45.0% |
| ! | TTTCTGGTGGAGAGTGTGAT+GGG | - | chr4.4:14767841-14767860 | MS.gene08961:CDS | 45.0% |
| !! | AGTTGATTCGTGAGAGGGAA+CGG | - | chr4.4:14768570-14768589 | MS.gene08961:CDS | 45.0% |
| !! | GATGTTGCACTTGTTGTTGG+TGG | - | chr4.4:14767936-14767955 | MS.gene08961:CDS | 45.0% |
| !! | GGTGATGTTGCACTTGTTGT+TGG | - | chr4.4:14767933-14767952 | MS.gene08961:CDS | 45.0% |
| !! | TTTTCTGGTGGAGAGTGTGA+TGG | - | chr4.4:14767840-14767859 | MS.gene08961:CDS | 45.0% |
| AAGGGAGAAGGAGAGGGAAA+AGG | - | chr4.4:14768469-14768488 | MS.gene08961:CDS | 50.0% | |
| AGGAGAGGGAAAAGGTTAGG+AGG | - | chr4.4:14768477-14768496 | MS.gene08961:CDS | 50.0% | |
| CATATGGGTCATTCAGGGGA+TGG | - | chr4.4:14768077-14768096 | MS.gene08961:CDS | 50.0% | |
| CATCTTCGCGAGAGAACCAT+CGG | + | chr4.4:14767649-14767668 | None:intergenic | 50.0% | |
| CGGTGGTTTATCCTTGGCAA+TGG | - | chr4.4:14767736-14767755 | MS.gene08961:CDS | 50.0% | |
| GAGAATGAATTGCAGGAGGC+TGG | - | chr4.4:14768598-14768617 | MS.gene08961:CDS | 50.0% | |
| GCACTTGTCCCATTTCTGCT+CGG | + | chr4.4:14768661-14768680 | None:intergenic | 50.0% | |
| GGAAAAGGAGAGGGAGGAAA+GGG | - | chr4.4:14768451-14768470 | MS.gene08961:CDS | 50.0% | |
| GGATGGAGGGGTTAACTCAT+TGG | - | chr4.4:14767880-14767899 | MS.gene08961:CDS | 50.0% | |
| GGGAAAAGGTTAGGAGGCAA+AGG | - | chr4.4:14768483-14768502 | MS.gene08961:CDS | 50.0% | |
| GGTTCATCATGTTCGCGATC+CGG | - | chr4.4:14767716-14767735 | MS.gene08961:CDS | 50.0% | |
| GTATGAGGAAGGGGAAGTGA+CGG | - | chr4.4:14768238-14768257 | MS.gene08961:CDS | 50.0% | |
| TAACCAGTTGGGGCAGTTGA+GGG | - | chr4.4:14768328-14768347 | MS.gene08961:CDS | 50.0% | |
| TATGAGGAAGGGGAAGTGAC+GGG | - | chr4.4:14768239-14768258 | MS.gene08961:CDS | 50.0% | |
| TATGGGTCATTCAGGGGATG+GGG | - | chr4.4:14768079-14768098 | MS.gene08961:CDS | 50.0% | |
| TGAAGACACTAGGGTTGAGG+GGG | - | chr4.4:14768844-14768863 | MS.gene08961:CDS | 50.0% | |
| TGAATTGCAGGAGGCTGGAA+TGG | - | chr4.4:14768603-14768622 | MS.gene08961:CDS | 50.0% | |
| TGAGGAGAGGGAAAAGGAGA+GGG | - | chr4.4:14768442-14768461 | MS.gene08961:CDS | 50.0% | |
| TGAGTGGGAAGCTATGGAGA+AGG | - | chr4.4:14768511-14768530 | MS.gene08961:CDS | 50.0% | |
| TGCTCGGTATATTCTCGCAG+TGG | - | chr4.4:14768723-14768742 | MS.gene08961:CDS | 50.0% | |
| TGGGCATATGGGTCATTCAG+GGG | - | chr4.4:14768073-14768092 | MS.gene08961:CDS | 50.0% | |
| TTGAGGAGAGGGAAAAGGAG+AGG | - | chr4.4:14768441-14768460 | MS.gene08961:CDS | 50.0% | |
| ! | CGAGATGGGTTTCTTGGTAG+TGG | - | chr4.4:14768023-14768042 | MS.gene08961:CDS | 50.0% |
| ! | GGAGATCGAGATGGGTTTCT+TGG | - | chr4.4:14768017-14768036 | MS.gene08961:CDS | 50.0% |
| ! | GGATGGGGATGGTGATTTTG+CGG | - | chr4.4:14768094-14768113 | MS.gene08961:CDS | 50.0% |
| !! | AGGAGGAGTTGATTCGTGAG+AGG | - | chr4.4:14768564-14768583 | MS.gene08961:CDS | 50.0% |
| !! | GATGGGTTTCTTGGTAGTGG+TGG | - | chr4.4:14768026-14768045 | MS.gene08961:CDS | 50.0% |
| !! | GGAGGAGTTGATTCGTGAGA+GGG | - | chr4.4:14768565-14768584 | MS.gene08961:CDS | 50.0% |
| !! | GTTGATTCGTGAGAGGGAAC+GGG | - | chr4.4:14768571-14768590 | MS.gene08961:CDS | 50.0% |
| !! | GTTGCACTTGTTGTTGGTGG+TGG | - | chr4.4:14767939-14767958 | MS.gene08961:CDS | 50.0% |
| !! | TGGTGGTGGAGGAATGGATA+TGG | - | chr4.4:14768043-14768062 | MS.gene08961:CDS | 50.0% |
| !! | TTTCTTGGTAGTGGTGGTGG+AGG | - | chr4.4:14768032-14768051 | MS.gene08961:CDS | 50.0% |
| ATCCGATAGGCCAGCAGGTT+GGG | + | chr4.4:14768753-14768772 | None:intergenic | 55.0% | |
| CTAACCAGTTGGGGCAGTTG+AGG | - | chr4.4:14768327-14768346 | MS.gene08961:CDS | 55.0% | |
| GAGGAAGGTTGTGAAGGGGA+TGG | - | chr4.4:14768280-14768299 | MS.gene08961:CDS | 55.0% | |
| GCGATCCGGTGGTTTATCCT+TGG | - | chr4.4:14767730-14767749 | MS.gene08961:CDS | 55.0% | |
| GGAGAGTTTGCGAGCAGAGT+GGG | - | chr4.4:14768409-14768428 | MS.gene08961:CDS | 55.0% | |
| GGAGGAAAGGGAGAAGGAGA+GGG | - | chr4.4:14768463-14768482 | MS.gene08961:CDS | 55.0% | |
| GGAGGCTGGAATGGAAGAAG+AGG | - | chr4.4:14768612-14768631 | MS.gene08961:CDS | 55.0% | |
| GGGAAAAGGAGAGGGAGGAA+AGG | - | chr4.4:14768450-14768469 | MS.gene08961:CDS | 55.0% | |
| GGTGTCTGAGTGGGAAGCTA+TGG | - | chr4.4:14768505-14768524 | MS.gene08961:CDS | 55.0% | |
| GTATGAGGCTGAAGATGGGG+AGG | - | chr4.4:14768163-14768182 | MS.gene08961:CDS | 55.0% | |
| GTATGATCCGATAGGCCAGC+AGG | + | chr4.4:14768758-14768777 | None:intergenic | 55.0% | |
| GTTGGGGCAGTTGAGGGAAA+TGG | - | chr4.4:14768334-14768353 | MS.gene08961:CDS | 55.0% | |
| TAGGATTTGAGGACGGCGGT+CGG | - | chr4.4:14767994-14768013 | MS.gene08961:CDS | 55.0% | |
| TCATCATGTTCGCGATCCGG+TGG | - | chr4.4:14767719-14767738 | MS.gene08961:CDS | 55.0% | |
| TGAGCAGCGCGAGATGGAAA+GGG | - | chr4.4:14768367-14768386 | MS.gene08961:CDS | 55.0% | |
| TTGAGCAGCGCGAGATGGAA+AGG | - | chr4.4:14768366-14768385 | MS.gene08961:CDS | 55.0% | |
| TTTCCCTCAACTGCCCCAAC+TGG | + | chr4.4:14768334-14768353 | None:intergenic | 55.0% | |
| !! | GAGGCAAAGGGTGTCTGAGT+GGG | - | chr4.4:14768496-14768515 | MS.gene08961:CDS | 55.0% |
| !! | GCACTTGTTGTTGGTGGTGG+TGG | - | chr4.4:14767942-14767961 | MS.gene08961:CDS | 55.0% |
| !! | GGGTTTCTTGGTAGTGGTGG+TGG | - | chr4.4:14768029-14768048 | MS.gene08961:CDS | 55.0% |
| !! | TGGTAGTGGTGGTGGAGGAA+TGG | - | chr4.4:14768037-14768056 | MS.gene08961:CDS | 55.0% |
| AGGATTTGAGGACGGCGGTC+GGG | - | chr4.4:14767995-14768014 | MS.gene08961:CDS | 60.0% | |
| GATCCGATAGGCCAGCAGGT+TGG | + | chr4.4:14768754-14768773 | None:intergenic | 60.0% | |
| GGAGAGGGAAAAGGAGAGGG+AGG | - | chr4.4:14768445-14768464 | MS.gene08961:CDS | 60.0% | |
| GGAGAGGGAGGAAAGGGAGA+AGG | - | chr4.4:14768457-14768476 | MS.gene08961:CDS | 60.0% | |
| GGGAGAGTTTGCGAGCAGAG+TGG | - | chr4.4:14768408-14768427 | MS.gene08961:CDS | 60.0% | |
| GGGAGGAAAGGGAGAAGGAG+AGG | - | chr4.4:14768462-14768481 | MS.gene08961:CDS | 60.0% | |
| GGGGCAGTTGAGGGAAATGG+AGG | - | chr4.4:14768337-14768356 | MS.gene08961:CDS | 60.0% | |
| GGTCATTCAGGGGATGGGGA+TGG | - | chr4.4:14768083-14768102 | MS.gene08961:CDS | 60.0% | |
| ! | AGATGGAAAGGGAGCGCGAG+AGG | - | chr4.4:14768378-14768397 | MS.gene08961:CDS | 60.0% |
| ! | TCGGTTTGAGCAGCGCGAGA+TGG | - | chr4.4:14768361-14768380 | MS.gene08961:CDS | 60.0% |
| ! | TGCCCAACCTGCTGGCCTAT+CGG | - | chr4.4:14768748-14768767 | MS.gene08961:CDS | 60.0% |
| !! | GGAGGCAAAGGGTGTCTGAG+TGG | - | chr4.4:14768495-14768514 | MS.gene08961:CDS | 60.0% |
| !! | GGTGGTGGTGGTACTGAGCA+CGG | - | chr4.4:14767954-14767973 | MS.gene08961:CDS | 60.0% |
| GCGGTCGGGGAGATCGAGAT+GGG | - | chr4.4:14768009-14768028 | MS.gene08961:CDS | 65.0% | |
| GGATTTGAGGACGGCGGTCG+GGG | - | chr4.4:14767996-14768015 | MS.gene08961:CDS | 65.0% | |
| ! | AAAGGGAGCGCGAGAGGCAG+AGG | - | chr4.4:14768384-14768403 | MS.gene08961:CDS | 65.0% |
| ! | GGTGGTGGTACTGAGCACGG+TGG | - | chr4.4:14767957-14767976 | MS.gene08961:CDS | 65.0% |
| !! | CAGTGGACTGCCCAACCTGC+TGG | - | chr4.4:14768740-14768759 | MS.gene08961:CDS | 65.0% |
| GGAGCGCGAGAGGCAGAGGA+GGG | - | chr4.4:14768388-14768407 | MS.gene08961:CDS | 70.0% | |
| GGCGGTCGGGGAGATCGAGA+TGG | - | chr4.4:14768008-14768027 | MS.gene08961:CDS | 70.0% | |
| ! | GGGAGCGCGAGAGGCAGAGG+AGG | - | chr4.4:14768387-14768406 | MS.gene08961:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 14767570 | 14768901 | 14767570 | ID=MS.gene08961 |
| chr4.4 | mRNA | 14767570 | 14768901 | 14767570 | ID=MS.gene08961.t1;Parent=MS.gene08961 |
| chr4.4 | exon | 14767570 | 14768901 | 14767570 | ID=MS.gene08961.t1.exon1;Parent=MS.gene08961.t1 |
| chr4.4 | CDS | 14767570 | 14768901 | 14767570 | ID=cds.MS.gene08961.t1;Parent=MS.gene08961.t1 |
| Gene Sequence |
| Protein sequence |
