Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20621.t1 | XP_024642404.1 | 90.5 | 253 | 13 | 1 | 19 | 260 | 1 | 253 | 2.70E-95 | 358.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20621.t1 | Q9SWG3 | 30.9 | 191 | 126 | 3 | 93 | 277 | 50 | 240 | 2.5e-17 | 90.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20621.t1 | A0A396HB38 | 90.5 | 253 | 13 | 1 | 19 | 260 | 1 | 253 | 2.0e-95 | 358.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene20621.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene20621 | 0.860646 | 1.79E-63 | -1.69E-46 |
| MS.gene049159 | MS.gene20621 | 0.810658 | 1.03E-50 | -1.69E-46 |
| MS.gene049178 | MS.gene20621 | 0.834204 | 3.43E-56 | -1.69E-46 |
| MS.gene049208 | MS.gene20621 | 0.804891 | 1.74E-49 | -1.69E-46 |
| MS.gene049264 | MS.gene20621 | 0.800182 | 1.62E-48 | -1.69E-46 |
| MS.gene049350 | MS.gene20621 | 0.806426 | 8.27E-50 | -1.69E-46 |
| MS.gene049368 | MS.gene20621 | 0.80999 | 1.44E-50 | -1.69E-46 |
| MS.gene049786 | MS.gene20621 | 0.815941 | 7.14E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene20621 | 0.801353 | 9.37E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene20621 | 0.803924 | 2.76E-49 | -1.69E-46 |
| MS.gene050253 | MS.gene20621 | 0.809264 | 2.06E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene20621 | 0.82698 | 2.01E-54 | -1.69E-46 |
| MS.gene050551 | MS.gene20621 | 0.805727 | 1.16E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene20621 | 0.826635 | 2.44E-54 | -1.69E-46 |
| MS.gene050721 | MS.gene20621 | 0.824233 | 9.02E-54 | -1.69E-46 |
| MS.gene050780 | MS.gene20621 | 0.818512 | 1.89E-52 | -1.69E-46 |
| MS.gene051102 | MS.gene20621 | 0.835512 | 1.61E-56 | -1.69E-46 |
| MS.gene051210 | MS.gene20621 | 0.832598 | 8.63E-56 | -1.69E-46 |
| MS.gene051247 | MS.gene20621 | 0.817607 | 3.02E-52 | -1.69E-46 |
| MS.gene051490 | MS.gene20621 | 0.815096 | 1.10E-51 | -1.69E-46 |
| MS.gene051700 | MS.gene20621 | 0.809266 | 2.06E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene20621 | 0.831203 | 1.91E-55 | -1.69E-46 |
| MS.gene051757 | MS.gene20621 | 0.805341 | 1.40E-49 | -1.69E-46 |
| MS.gene051790 | MS.gene20621 | 0.832946 | 7.07E-56 | -1.69E-46 |
| MS.gene051975 | MS.gene20621 | 0.806048 | 9.94E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene20621 | 0.800104 | 1.69E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene20621 | 0.80367 | 3.12E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene20621 | 0.820393 | 7.02E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene20621 | 0.822211 | 2.67E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene20621 | 0.815246 | 1.02E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene20621 | 0.843715 | 1.18E-58 | -1.69E-46 |
| MS.gene052773 | MS.gene20621 | 0.802627 | 5.13E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene20621 | 0.83005 | 3.65E-55 | -1.69E-46 |
| MS.gene053079 | MS.gene20621 | 0.832848 | 7.48E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene20621 | 0.815465 | 9.12E-52 | -1.69E-46 |
| MS.gene053381 | MS.gene20621 | 0.804987 | 1.66E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene20621 | 0.815148 | 1.07E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene20621 | 0.805192 | 1.50E-49 | -1.69E-46 |
| MS.gene05462 | MS.gene20621 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene20621 | 0.821685 | 3.54E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene20621 | 0.836284 | 1.02E-56 | -1.69E-46 |
| MS.gene055313 | MS.gene20621 | 0.852459 | 4.55E-61 | -1.69E-46 |
| MS.gene055314 | MS.gene20621 | 0.813703 | 2.24E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene20621 | 0.812647 | 3.82E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene20621 | 0.805189 | 1.51E-49 | -1.69E-46 |
| MS.gene055468 | MS.gene20621 | 0.802315 | 5.95E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene20621 | 0.827135 | 1.85E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene20621 | 0.844256 | 8.46E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene20621 | 0.820808 | 5.64E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene20621 | 0.839417 | 1.60E-57 | -1.69E-46 |
| MS.gene056181 | MS.gene20621 | 0.82181 | 3.31E-53 | -1.69E-46 |
| MS.gene056390 | MS.gene20621 | 0.802864 | 4.58E-49 | -1.69E-46 |
| MS.gene056432 | MS.gene20621 | 0.80293 | 4.44E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene20621 | 0.80901 | 2.34E-50 | -1.69E-46 |
| MS.gene056552 | MS.gene20621 | 0.813082 | 3.06E-51 | -1.69E-46 |
| MS.gene056638 | MS.gene20621 | 0.812936 | 3.30E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene20621 | 0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene20621 | 0.814323 | 1.63E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene20621 | 0.868509 | 6.19E-66 | -1.69E-46 |
| MS.gene057915 | MS.gene20621 | 0.839877 | 1.22E-57 | -1.69E-46 |
| MS.gene058289 | MS.gene20621 | 0.802711 | 4.93E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene20621 | 0.807747 | 4.35E-50 | -1.69E-46 |
| MS.gene058639 | MS.gene20621 | 0.822354 | 2.48E-53 | -1.69E-46 |
| MS.gene058668 | MS.gene20621 | 0.807522 | 4.85E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene20621 | 0.833718 | 4.54E-56 | -1.69E-46 |
| MS.gene059170 | MS.gene20621 | 0.809407 | 1.92E-50 | -1.69E-46 |
| MS.gene059331 | MS.gene20621 | 0.812741 | 3.64E-51 | -1.69E-46 |
| MS.gene059335 | MS.gene20621 | 0.807624 | 4.62E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene20621 | 0.820362 | 7.14E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene20621 | 0.809856 | 1.54E-50 | -1.69E-46 |
| MS.gene059725 | MS.gene20621 | 0.846058 | 2.76E-59 | -1.69E-46 |
| MS.gene059774 | MS.gene20621 | 0.820509 | 6.61E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene20621 | 0.829195 | 5.90E-55 | -1.69E-46 |
| MS.gene060380 | MS.gene20621 | 0.802544 | 5.33E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene20621 | 0.804288 | 2.32E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene20621 | 0.85945 | 4.10E-63 | -1.69E-46 |
| MS.gene060697 | MS.gene20621 | 0.822086 | 2.86E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20621.t1 | MTR_0856s0010 | 61.310 | 168 | 51 | 4 | 54 | 217 | 2 | 159 | 2.21e-63 | 197 |
| MS.gene20621.t1 | MTR_7g115320 | 48.485 | 66 | 31 | 1 | 179 | 244 | 6 | 68 | 4.56e-14 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20621.t1 | AT4G15090 | 30.890 | 191 | 126 | 3 | 93 | 277 | 50 | 240 | 6.73e-16 | 78.2 |
| MS.gene20621.t1 | AT4G15090 | 30.890 | 191 | 126 | 3 | 93 | 277 | 50 | 240 | 6.73e-16 | 78.2 |
| MS.gene20621.t1 | AT4G15090 | 30.890 | 191 | 126 | 3 | 93 | 277 | 50 | 240 | 6.73e-16 | 78.2 |
| MS.gene20621.t1 | AT4G15090 | 30.890 | 191 | 126 | 3 | 93 | 277 | 50 | 240 | 6.73e-16 | 78.2 |
| MS.gene20621.t1 | AT4G15090 | 30.890 | 191 | 126 | 3 | 93 | 277 | 50 | 240 | 6.73e-16 | 78.2 |
| MS.gene20621.t1 | AT1G76320 | 26.984 | 189 | 129 | 4 | 98 | 284 | 1 | 182 | 5.04e-11 | 63.5 |
| MS.gene20621.t1 | AT1G76320 | 26.984 | 189 | 129 | 4 | 98 | 284 | 1 | 182 | 5.38e-11 | 63.5 |
| MS.gene20621.t1 | AT1G76320 | 26.984 | 189 | 129 | 4 | 98 | 284 | 1 | 182 | 5.38e-11 | 63.5 |
| MS.gene20621.t1 | AT4G38180 | 25.510 | 196 | 136 | 5 | 93 | 279 | 72 | 266 | 7.05e-11 | 63.2 |
| MS.gene20621.t1 | AT1G76320 | 26.984 | 189 | 129 | 4 | 98 | 284 | 1 | 182 | 7.18e-11 | 63.2 |
Find 41 sgRNAs with CRISPR-Local
Find 54 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGGATAGTTCAAAGAATT+TGG | 0.188161 | 6.3:+4142680 | MS.gene20621:CDS |
| CCCACATCTCGTTTGCAAAA+TGG | 0.190562 | 6.3:-4143344 | None:intergenic |
| TGGAGAGTATGCTTTGAAAA+AGG | 0.195927 | 6.3:+4142956 | MS.gene20621:CDS |
| TTGAACAATCTTCCCTTTGC+AGG | 0.266353 | 6.3:-4143200 | None:intergenic |
| CACCCTCTATTGGAACTTCA+TGG | 0.318363 | 6.3:+4142662 | MS.gene20621:CDS |
| CTCCTGGATCATCAGTGCTT+TGG | 0.328920 | 6.3:-4143262 | None:intergenic |
| TTGGCACTTTCACCCTCTAT+TGG | 0.334745 | 6.3:+4142652 | MS.gene20621:CDS |
| GCACGTTGGAAGCCTGAAAC+AGG | 0.364470 | 6.3:+4142894 | MS.gene20621:CDS |
| CAACCTCTTGTTAAAGATGT+AGG | 0.366945 | 6.3:+4143305 | MS.gene20621:CDS |
| ACATCAAGAAAAGGAGATAA+TGG | 0.382507 | 6.3:+4142999 | MS.gene20621:CDS |
| TTCCAACTTAATGCAAATCT+TGG | 0.384721 | 6.3:-4143120 | None:intergenic |
| GAAGATTGTTCAAGGCTAAC+AGG | 0.389692 | 6.3:+4143210 | MS.gene20621:CDS |
| TACAAGGAACGACATGCAAT+TGG | 0.415503 | 6.3:+4143377 | MS.gene20621:CDS |
| AACTTAATGCAAATCTTGGC+TGG | 0.446598 | 6.3:-4143116 | None:intergenic |
| AGCCAAGATTTGCATTAAGT+TGG | 0.449507 | 6.3:+4143118 | MS.gene20621:CDS |
| GTCTTCTTGATCCTCACTCC+TGG | 0.453631 | 6.3:-4143278 | None:intergenic |
| TATCCATGAAGTTCCAATAG+AGG | 0.493111 | 6.3:-4142665 | None:intergenic |
| CAGGGCTAGTCTCGTGAGAA+TGG | 0.497072 | 6.3:-4143181 | None:intergenic |
| AGTTGGAAGACGATGGTTTG+TGG | 0.499523 | 6.3:+4143135 | MS.gene20621:CDS |
| TCAAAGAATTTGGTAGATTG+TGG | 0.500305 | 6.3:+4142690 | MS.gene20621:CDS |
| AAGATTAGAACATCAAGAAA+AGG | 0.501587 | 6.3:+4142990 | MS.gene20621:CDS |
| CGACATGCAATTGGAAAAGA+AGG | 0.505598 | 6.3:+4143386 | MS.gene20621:CDS |
| TGCAAAGGGAAGATTGTTCA+AGG | 0.507962 | 6.3:+4143202 | MS.gene20621:CDS |
| GATAACTCTAATGATAATGA+AGG | 0.530992 | 6.3:+4142774 | MS.gene20621:CDS |
| GATAACTCTAATGATAATGA+AGG | 0.530992 | 6.3:+4142807 | MS.gene20621:CDS |
| TGAACAATCTTCCCTTTGCA+GGG | 0.541033 | 6.3:-4143199 | None:intergenic |
| ATCCAAAGCACTGATGATCC+AGG | 0.543376 | 6.3:+4143260 | MS.gene20621:CDS |
| TGTGGGAAATTATGTTTACA+AGG | 0.554375 | 6.3:+4143361 | MS.gene20621:CDS |
| TGTGGTACTATTCATGATGA+AGG | 0.556353 | 6.3:+4142708 | MS.gene20621:CDS |
| CACGAGACTAGCCCTGCAAA+GGG | 0.557494 | 6.3:+4143188 | MS.gene20621:CDS |
| TCACGAGACTAGCCCTGCAA+AGG | 0.558154 | 6.3:+4143187 | MS.gene20621:CDS |
| GATAACTCGAATGATAATGA+AGG | 0.559715 | 6.3:+4142741 | MS.gene20621:CDS |
| ATCCATGAAGTTCCAATAGA+GGG | 0.567931 | 6.3:-4142664 | None:intergenic |
| AATTCTTGCTTGCTCAAGAG+AGG | 0.580330 | 6.3:+4143037 | MS.gene20621:CDS |
| TGCATTAAGTTGGAAGACGA+TGG | 0.588214 | 6.3:+4143128 | MS.gene20621:CDS |
| ATTCTTGCTTGCTCAAGAGA+GGG | 0.604718 | 6.3:+4143038 | MS.gene20621:CDS |
| GCTCCTACATCTTTAACAAG+AGG | 0.607465 | 6.3:-4143308 | None:intergenic |
| GCAATTGGAAAAGAAGGTGA+TGG | 0.609009 | 6.3:+4143392 | MS.gene20621:CDS |
| CACGTTGGAAGCCTGAAACA+GGG | 0.628231 | 6.3:+4142895 | MS.gene20621:CDS |
| GCACTGATGATCCAGGAGTG+AGG | 0.654669 | 6.3:+4143267 | MS.gene20621:CDS |
| CTAATGATGATGAAGCACGT+TGG | 0.674855 | 6.3:+4142880 | MS.gene20621:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGCTATTTTTGTAAAATGA+GGG | + | chr6.3:4143427-4143446 | MS.gene20621:CDS | 20.0% |
| !!! | GATGATGTTAAAACATTTTA+TGG | + | chr6.3:4142936-4142955 | MS.gene20621:CDS | 20.0% |
| !!! | TAAGCTATTTTTGTAAAATG+AGG | + | chr6.3:4143426-4143445 | MS.gene20621:CDS | 20.0% |
| ! | AAGATTAGAACATCAAGAAA+AGG | + | chr6.3:4142990-4143009 | MS.gene20621:CDS | 25.0% |
| !! | GATAACTCTAATGATAATGA+AGG | + | chr6.3:4142774-4142793 | MS.gene20621:CDS | 25.0% |
| !!! | GACAATTTTTTTCCTTAGAT+GGG | - | chr6.3:4143097-4143116 | None:intergenic | 25.0% |
| ACATCAAGAAAAGGAGATAA+TGG | + | chr6.3:4142999-4143018 | MS.gene20621:CDS | 30.0% | |
| CATGGATAGTTCAAAGAATT+TGG | + | chr6.3:4142680-4142699 | MS.gene20621:CDS | 30.0% | |
| TCAAAGAATTTGGTAGATTG+TGG | + | chr6.3:4142690-4142709 | MS.gene20621:CDS | 30.0% | |
| TGTGGGAAATTATGTTTACA+AGG | + | chr6.3:4143361-4143380 | MS.gene20621:CDS | 30.0% | |
| TTCCAACTTAATGCAAATCT+TGG | - | chr6.3:4143123-4143142 | None:intergenic | 30.0% | |
| ! | GATAACTCGAATGATAATGA+AGG | + | chr6.3:4142741-4142760 | MS.gene20621:CDS | 30.0% |
| !!! | ATGCTTTGAAAAAGGGTTTT+AGG | + | chr6.3:4142964-4142983 | MS.gene20621:CDS | 30.0% |
| !!! | GGACAATTTTTTTCCTTAGA+TGG | - | chr6.3:4143098-4143117 | None:intergenic | 30.0% |
| !!! | TGACTTATTTTGTGCAGTTT+TGG | + | chr6.3:4142628-4142647 | MS.gene20621:CDS | 30.0% |
| AACTTAATGCAAATCTTGGC+TGG | - | chr6.3:4143119-4143138 | None:intergenic | 35.0% | |
| AGCCAAGATTTGCATTAAGT+TGG | + | chr6.3:4143118-4143137 | MS.gene20621:CDS | 35.0% | |
| ATCCATGAAGTTCCAATAGA+GGG | - | chr6.3:4142667-4142686 | None:intergenic | 35.0% | |
| CAACCTCTTGTTAAAGATGT+AGG | + | chr6.3:4143305-4143324 | MS.gene20621:CDS | 35.0% | |
| GTTAAAAACTCTCCCATCTA+AGG | + | chr6.3:4143082-4143101 | MS.gene20621:CDS | 35.0% | |
| TATCCATGAAGTTCCAATAG+AGG | - | chr6.3:4142668-4142687 | None:intergenic | 35.0% | |
| TGTGGTACTATTCATGATGA+AGG | + | chr6.3:4142708-4142727 | MS.gene20621:CDS | 35.0% | |
| !! | GGAGAGTATGCTTTGAAAAA+GGG | + | chr6.3:4142957-4142976 | MS.gene20621:CDS | 35.0% |
| !! | TGGAGAGTATGCTTTGAAAA+AGG | + | chr6.3:4142956-4142975 | MS.gene20621:CDS | 35.0% |
| !!! | CTTTGAAAAAGGGTTTTAGG+TGG | + | chr6.3:4142967-4142986 | MS.gene20621:CDS | 35.0% |
| !!! | TATTTTGTGCAGTTTTGGCT+TGG | + | chr6.3:4142633-4142652 | MS.gene20621:CDS | 35.0% |
| AATTCTTGCTTGCTCAAGAG+AGG | + | chr6.3:4143037-4143056 | MS.gene20621:CDS | 40.0% | |
| ATTCTTGCTTGCTCAAGAGA+GGG | + | chr6.3:4143038-4143057 | MS.gene20621:CDS | 40.0% | |
| CGACATGCAATTGGAAAAGA+AGG | + | chr6.3:4143386-4143405 | MS.gene20621:CDS | 40.0% | |
| GAAAAACACATCCCTGTTTC+AGG | - | chr6.3:4142909-4142928 | None:intergenic | 40.0% | |
| GAAGATTGTTCAAGGCTAAC+AGG | + | chr6.3:4143210-4143229 | MS.gene20621:CDS | 40.0% | |
| GCAATTGGAAAAGAAGGTGA+TGG | + | chr6.3:4143392-4143411 | MS.gene20621:CDS | 40.0% | |
| GCTCCTACATCTTTAACAAG+AGG | - | chr6.3:4143311-4143330 | None:intergenic | 40.0% | |
| TACAAGGAACGACATGCAAT+TGG | + | chr6.3:4143377-4143396 | MS.gene20621:CDS | 40.0% | |
| TGAACAATCTTCCCTTTGCA+GGG | - | chr6.3:4143202-4143221 | None:intergenic | 40.0% | |
| TGCAAAGGGAAGATTGTTCA+AGG | + | chr6.3:4143202-4143221 | MS.gene20621:CDS | 40.0% | |
| TTGAACAATCTTCCCTTTGC+AGG | - | chr6.3:4143203-4143222 | None:intergenic | 40.0% | |
| ! | ACCATTTTGCAAACGAGATG+TGG | + | chr6.3:4143343-4143362 | MS.gene20621:CDS | 40.0% |
| ! | CCATTTTGCAAACGAGATGT+GGG | + | chr6.3:4143344-4143363 | MS.gene20621:CDS | 40.0% |
| ! | CTAATGATGATGAAGCACGT+TGG | + | chr6.3:4142880-4142899 | MS.gene20621:CDS | 40.0% |
| !! | TGCATTAAGTTGGAAGACGA+TGG | + | chr6.3:4143128-4143147 | MS.gene20621:CDS | 40.0% |
| AGTTGGAAGACGATGGTTTG+TGG | + | chr6.3:4143135-4143154 | MS.gene20621:CDS | 45.0% | |
| CACCCTCTATTGGAACTTCA+TGG | + | chr6.3:4142662-4142681 | MS.gene20621:CDS | 45.0% | |
| CCCACATCTCGTTTGCAAAA+TGG | - | chr6.3:4143347-4143366 | None:intergenic | 45.0% | |
| TTGGCACTTTCACCCTCTAT+TGG | + | chr6.3:4142652-4142671 | MS.gene20621:CDS | 45.0% | |
| !! | ATCCAAAGCACTGATGATCC+AGG | + | chr6.3:4143260-4143279 | MS.gene20621:CDS | 45.0% |
| CACGTTGGAAGCCTGAAACA+GGG | + | chr6.3:4142895-4142914 | MS.gene20621:CDS | 50.0% | |
| CTCCTGGATCATCAGTGCTT+TGG | - | chr6.3:4143265-4143284 | None:intergenic | 50.0% | |
| GTCTTCTTGATCCTCACTCC+TGG | - | chr6.3:4143281-4143300 | None:intergenic | 50.0% | |
| GCACGTTGGAAGCCTGAAAC+AGG | + | chr6.3:4142894-4142913 | MS.gene20621:CDS | 55.0% | |
| ! | CACGAGACTAGCCCTGCAAA+GGG | + | chr6.3:4143188-4143207 | MS.gene20621:CDS | 55.0% |
| ! | GCACTGATGATCCAGGAGTG+AGG | + | chr6.3:4143267-4143286 | MS.gene20621:CDS | 55.0% |
| ! | TCACGAGACTAGCCCTGCAA+AGG | + | chr6.3:4143187-4143206 | MS.gene20621:CDS | 55.0% |
| !! | CAGGGCTAGTCTCGTGAGAA+TGG | - | chr6.3:4143184-4143203 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 4142627 | 4143499 | 4142627 | ID=MS.gene20621 |
| chr6.3 | mRNA | 4142627 | 4143499 | 4142627 | ID=MS.gene20621.t1;Parent=MS.gene20621 |
| chr6.3 | exon | 4142627 | 4143499 | 4142627 | ID=MS.gene20621.t1.exon1;Parent=MS.gene20621.t1 |
| chr6.3 | CDS | 4142627 | 4143499 | 4142627 | ID=cds.MS.gene20621.t1;Parent=MS.gene20621.t1 |
| Gene Sequence |
| Protein sequence |
