AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22580.t1 MTR_5g011310 96.757 370 12 0 226 595 387 756 0.0 727
MS.gene22580.t1 MTR_5g011310 91.176 238 21 0 1 238 1 238 3.82e-156 466
MS.gene22580.t1 MTR_5g011340 94.865 370 19 0 226 595 384 753 0.0 718
MS.gene22580.t1 MTR_5g011340 77.824 239 48 2 1 238 1 235 1.45e-129 397
MS.gene22580.t1 MTR_5g011320 93.784 370 22 1 226 595 380 748 0.0 707
MS.gene22580.t1 MTR_5g011320 78.243 239 43 3 1 238 1 231 4.38e-126 388
MS.gene22580.t1 MTR_5g011190 88.889 369 41 0 226 594 387 755 0.0 670
MS.gene22580.t1 MTR_5g011190 88.235 238 28 0 1 238 1 238 4.51e-148 446
MS.gene22580.t1 MTR_5g011370 88.108 370 44 0 226 595 407 776 0.0 668
MS.gene22580.t1 MTR_5g011370 88.655 238 27 0 1 238 21 258 5.70e-149 448
MS.gene22580.t1 MTR_5g011270 65.217 391 131 1 210 595 364 754 2.93e-177 521
MS.gene22580.t1 MTR_5g011270 52.155 232 96 5 1 224 1 225 1.45e-69 239
MS.gene22580.t1 MTR_5g011260 65.128 390 131 1 210 594 364 753 6.68e-176 517
MS.gene22580.t1 MTR_5g011260 53.017 232 94 5 1 224 1 225 5.48e-71 243
MS.gene22580.t1 MTR_5g011280 66.240 391 126 2 210 594 367 757 9.18e-175 514
MS.gene22580.t1 MTR_5g011280 57.534 219 85 3 22 236 26 240 1.16e-67 234
MS.gene22580.t1 MTR_4g102400 61.333 375 139 4 223 594 383 754 2.75e-151 454
MS.gene22580.t1 MTR_4g102400 46.888 241 114 7 8 236 1 239 2.18e-58 209
MS.gene22580.t1 MTR_7g098630 46.272 389 188 8 221 592 376 760 1.43e-99 322
MS.gene22580.t1 MTR_7g098630 41.176 204 100 7 38 223 20 221 1.05e-34 140
MS.gene22580.t1 MTR_4g125180 47.632 380 185 7 224 591 373 750 5.28e-97 313
MS.gene22580.t1 MTR_4g125180 37.129 202 96 6 41 223 28 217 1.31e-25 112
MS.gene22580.t1 MTR_4g073540 46.530 389 185 9 222 592 384 767 1.67e-94 306
MS.gene22580.t1 MTR_4g073540 37.705 183 88 5 64 225 50 227 2.63e-27 117
MS.gene22580.t1 MTR_7g075900 44.388 392 198 8 219 595 388 774 2.82e-93 303
MS.gene22580.t1 MTR_7g075900 37.089 213 100 6 44 223 25 236 2.52e-28 120
MS.gene22580.t1 MTR_2g042130 44.051 395 195 8 211 591 389 771 9.92e-93 302
MS.gene22580.t1 MTR_2g042130 35.349 215 102 6 44 223 26 238 1.84e-27 118
MS.gene22580.t1 MTR_5g016120 45.910 379 187 8 230 595 390 763 4.08e-89 292
MS.gene22580.t1 MTR_5g016120 37.118 229 118 8 11 223 7 225 2.11e-30 127
MS.gene22580.t1 MTR_8g021130 43.257 393 196 12 218 592 391 774 2.62e-87 288
MS.gene22580.t1 MTR_8g021130 34.135 208 112 6 39 223 32 237 7.15e-24 107
MS.gene22580.t1 MTR_8g022870 44.301 386 195 7 229 595 394 778 1.32e-86 286
MS.gene22580.t1 MTR_8g022870 37.313 201 103 6 44 225 29 225 2.22e-27 117
MS.gene22580.t1 MTR_0047s0120 45.119 379 190 8 230 595 386 759 1.48e-86 285
MS.gene22580.t1 MTR_0047s0120 34.529 223 120 7 16 223 10 221 3.21e-28 120
MS.gene22580.t1 MTR_4g095360 40.943 403 215 9 203 592 362 754 3.61e-84 279
MS.gene22580.t1 MTR_4g095360 41.538 195 95 5 44 223 30 220 5.28e-35 141
MS.gene22580.t1 MTR_1g018510 41.667 396 201 7 222 591 333 724 6.79e-82 272
MS.gene22580.t1 MTR_1g018510 36.158 177 96 4 62 223 7 181 3.79e-24 107
MS.gene22580.t1 MTR_4g103495 41.787 414 225 7 189 592 216 623 1.27e-79 263
MS.gene22580.t1 MTR_1g102350 42.520 381 200 6 227 594 404 778 2.85e-79 266
MS.gene22580.t1 MTR_1g102350 32.143 252 130 8 1 223 1 240 2.65e-25 111
MS.gene22580.t1 MTR_3g102810 41.730 393 205 7 218 591 366 753 3.30e-79 265
MS.gene22580.t1 MTR_3g102810 35.484 248 133 8 26 251 7 249 4.22e-28 120
MS.gene22580.t1 MTR_3g082200 40.519 385 214 6 217 592 253 631 3.39e-79 263
MS.gene22580.t1 MTR_3g082200 40.519 385 214 6 217 592 268 646 6.24e-79 262
MS.gene22580.t1 MTR_3g082200 37.931 116 50 5 130 225 1 114 9.11e-14 74.7
MS.gene22580.t1 MTR_3g082200 40.519 385 214 6 217 592 391 769 1.86e-78 264
MS.gene22580.t1 MTR_3g082200 33.333 210 110 7 42 223 28 235 3.12e-23 105
MS.gene22580.t1 MTR_4g103450 42.400 375 202 6 229 594 376 745 2.19e-78 263
MS.gene22580.t1 MTR_4g103450 31.061 264 147 8 43 271 1 264 1.01e-21 100
MS.gene22580.t1 MTR_5g025010 41.071 392 209 8 206 592 343 717 3.40e-77 259
MS.gene22580.t1 MTR_5g025010 38.650 163 78 4 82 225 37 196 1.68e-24 108
MS.gene22580.t1 MTR_5g055920 38.554 415 241 6 189 594 259 668 5.24e-77 258
MS.gene22580.t1 MTR_5g025010 41.071 392 209 8 206 592 375 749 6.92e-77 259
MS.gene22580.t1 MTR_5g025010 38.650 163 78 4 82 225 69 228 1.48e-24 108
MS.gene22580.t1 MTR_4g103430 40.241 415 230 7 189 592 361 768 9.88e-77 259
MS.gene22580.t1 MTR_4g103430 34.524 168 90 4 78 225 69 236 3.85e-19 92.0
MS.gene22580.t1 MTR_4g103480 41.333 375 206 6 229 594 419 788 2.50e-75 256
MS.gene22580.t1 MTR_4g103480 32.035 231 129 6 69 271 77 307 1.09e-20 97.1
MS.gene22580.t1 MTR_4g103490 40.657 396 212 8 216 594 396 785 5.57e-75 254
MS.gene22580.t1 MTR_4g103490 36.905 168 84 5 78 225 73 238 1.18e-21 100
MS.gene22580.t1 MTR_4g134320 39.535 387 214 6 217 592 388 765 1.78e-74 253
MS.gene22580.t1 MTR_4g134320 30.508 236 130 6 17 225 8 236 3.91e-22 101
MS.gene22580.t1 MTR_8g072440 39.948 383 212 8 217 592 339 710 7.19e-74 250
MS.gene22580.t1 MTR_8g072440 38.596 171 83 5 82 233 32 199 1.32e-25 112
MS.gene22580.t1 MTR_8g083220 40.548 365 209 4 230 592 416 774 1.35e-73 251
MS.gene22580.t1 MTR_8g083220 36.000 225 116 7 22 225 28 245 1.28e-26 115
MS.gene22580.t1 MTR_8g072440 39.948 383 212 8 217 592 381 752 1.44e-73 250
MS.gene22580.t1 MTR_8g072440 38.596 171 83 5 82 233 74 241 1.35e-25 112
MS.gene22580.t1 MTR_7g098070 38.760 387 217 6 217 592 384 761 6.14e-71 243
MS.gene22580.t1 MTR_7g098070 32.367 207 114 6 44 225 27 232 1.64e-22 102
MS.gene22580.t1 MTR_4g103495 42.582 364 196 5 187 541 363 722 2.64e-70 241
MS.gene22580.t1 MTR_4g103495 36.471 170 82 7 78 225 70 235 5.74e-19 91.7
MS.gene22580.t1 MTR_5g096750 39.461 408 240 6 189 595 366 767 2.71e-70 241
MS.gene22580.t1 MTR_5g096750 30.709 254 144 9 58 282 53 303 2.62e-21 99.0
MS.gene22580.t1 MTR_8g042670 36.919 409 238 6 193 592 236 633 4.07e-70 238
MS.gene22580.t1 MTR_8g042670 36.691 417 244 6 185 592 352 757 5.04e-69 238
MS.gene22580.t1 MTR_8g042670 36.702 188 109 5 45 223 35 221 5.95e-23 103
MS.gene22580.t1 MTR_7g081420 40.863 394 197 16 226 595 406 787 3.54e-68 236
MS.gene22580.t1 MTR_7g081420 35.429 175 95 6 69 225 64 238 3.31e-15 79.7
MS.gene22580.t1 MTR_8g042710 36.905 420 242 6 185 592 355 763 3.58e-67 233
MS.gene22580.t1 MTR_8g042710 34.500 200 109 7 45 223 26 224 5.20e-21 97.8
MS.gene22580.t1 MTR_3g061110 37.766 376 219 6 226 592 383 752 1.92e-66 231
MS.gene22580.t1 MTR_3g061110 30.837 227 121 7 17 229 5 209 8.35e-18 87.8
MS.gene22580.t1 MTR_7g081580 40.415 386 203 13 226 592 406 783 1.98e-66 231
MS.gene22580.t1 MTR_7g081580 35.057 174 95 6 78 233 73 246 3.13e-16 82.8
MS.gene22580.t1 MTR_4g103400 39.153 378 211 8 230 592 403 776 3.79e-66 230
MS.gene22580.t1 MTR_4g103400 34.270 178 96 3 69 225 60 237 1.28e-19 93.6
MS.gene22580.t1 MTR_4g053630 37.340 391 223 9 213 592 273 652 3.44e-65 225
MS.gene22580.t1 MTR_4g053630 40.800 125 49 6 121 224 4 124 1.55e-12 70.9
MS.gene22580.t1 MTR_8g024380 39.733 375 193 10 240 592 395 758 4.39e-65 227
MS.gene22580.t1 MTR_8g024380 32.184 261 141 8 45 271 30 288 2.52e-32 133
MS.gene22580.t1 MTR_8g024390 37.401 377 203 10 238 592 392 757 6.19e-65 227
MS.gene22580.t1 MTR_8g024390 35.407 209 108 6 38 224 25 228 6.27e-29 122
MS.gene22580.t1 MTR_7g081750 38.575 407 210 12 222 595 401 800 7.61e-65 227
MS.gene22580.t1 MTR_7g081750 35.955 178 90 8 69 225 63 237 1.88e-19 93.2
MS.gene22580.t1 MTR_4g053630 37.340 391 223 9 213 592 350 729 8.05e-65 226
MS.gene22580.t1 MTR_4g053630 36.310 168 82 6 78 224 38 201 5.18e-17 85.1
MS.gene22580.t1 MTR_2g018135 38.010 392 217 8 220 595 404 785 7.85e-64 224
MS.gene22580.t1 MTR_2g018135 33.520 179 77 6 81 224 67 238 7.06e-20 94.4
MS.gene22580.t1 MTR_1g078110 40.701 371 191 12 240 592 394 753 1.47e-63 223
MS.gene22580.t1 MTR_1g078110 35.784 204 104 5 45 223 30 231 8.22e-33 134
MS.gene22580.t1 MTR_7g118080 37.204 422 216 11 208 592 346 755 8.95e-63 221
MS.gene22580.t1 MTR_7g118080 31.878 229 128 5 18 223 8 231 3.61e-25 110
MS.gene22580.t1 MTR_7g481600 40.674 386 202 13 226 592 406 783 3.18e-62 220
MS.gene22580.t1 MTR_7g481600 34.483 174 96 6 78 233 73 246 2.17e-15 80.1
MS.gene22580.t1 MTR_4g053635 37.656 401 215 13 210 592 289 672 1.16e-61 216
MS.gene22580.t1 MTR_4g053635 36.905 168 81 6 96 242 2 165 1.20e-17 87.0
MS.gene22580.t1 MTR_7g081500 39.211 431 227 17 187 595 368 785 1.25e-61 218
MS.gene22580.t1 MTR_7g081500 36.571 175 93 6 69 225 63 237 1.87e-17 86.7
MS.gene22580.t1 MTR_1g079120 36.082 388 221 9 225 592 380 760 2.80e-61 217
MS.gene22580.t1 MTR_1g079120 32.039 309 167 9 2 282 1 294 2.32e-34 139
MS.gene22580.t1 MTR_2g018125 37.500 384 216 7 226 595 413 786 2.81e-61 217
MS.gene22580.t1 MTR_2g018125 31.915 235 128 6 40 242 24 258 2.83e-21 99.0
MS.gene22580.t1 MTR_8g024420 37.887 388 186 12 238 592 356 721 3.17e-61 216
MS.gene22580.t1 MTR_8g024420 38.674 181 91 4 64 224 14 194 7.00e-31 128
MS.gene22580.t1 MTR_8g006680 41.667 360 180 11 240 592 386 722 3.38e-61 216
MS.gene22580.t1 MTR_8g006680 31.841 201 125 5 26 223 18 209 1.02e-17 87.4
MS.gene22580.t1 MTR_8g005300 41.667 360 180 11 240 592 386 722 3.38e-61 216
MS.gene22580.t1 MTR_8g005300 31.841 201 125 5 26 223 18 209 1.02e-17 87.4
MS.gene22580.t1 MTR_8g005640 41.667 360 180 11 240 592 386 722 3.38e-61 216
MS.gene22580.t1 MTR_8g005640 31.841 201 125 5 26 223 18 209 1.02e-17 87.4
MS.gene22580.t1 MTR_7g104200 38.701 385 199 14 226 595 381 743 8.31e-60 212
MS.gene22580.t1 MTR_7g104200 37.430 179 98 5 64 233 54 227 1.09e-24 109
MS.gene22580.t1 MTR_7g079310 39.009 323 167 9 290 592 451 763 3.54e-59 211
MS.gene22580.t1 MTR_7g079310 30.159 315 164 11 2 280 1 295 3.64e-28 120
MS.gene22580.t1 MTR_6g055570 40.000 365 188 11 240 592 384 729 5.11e-59 210
MS.gene22580.t1 MTR_6g055570 33.333 189 97 4 57 223 30 211 1.08e-17 87.4
MS.gene22580.t1 MTR_8g033150 34.165 401 229 9 207 592 344 724 5.44e-59 210
MS.gene22580.t1 MTR_8g033150 37.791 172 89 6 78 238 53 217 2.51e-22 102
MS.gene22580.t1 MTR_8g033150 34.165 401 229 9 207 592 371 751 6.92e-59 210
MS.gene22580.t1 MTR_8g033150 37.791 172 89 6 78 238 80 244 2.81e-22 102
MS.gene22580.t1 MTR_3g104930 35.392 421 241 10 189 589 349 758 1.31e-58 209
MS.gene22580.t1 MTR_3g104930 34.940 166 83 5 77 223 60 219 3.73e-19 92.0
MS.gene22580.t1 MTR_1g006990 40.164 366 184 12 240 592 391 734 1.91e-58 208
MS.gene22580.t1 MTR_1g006990 30.992 242 149 5 5 242 3 230 4.58e-20 95.1
MS.gene22580.t1 MTR_7g075890 34.684 395 225 11 213 595 526 899 2.83e-58 210
MS.gene22580.t1 MTR_7g075890 39.053 169 81 5 78 233 226 385 4.70e-24 107
MS.gene22580.t1 MTR_7g081380 37.871 404 201 15 229 592 413 806 3.44e-58 209
MS.gene22580.t1 MTR_7g081380 35.429 175 95 6 69 225 64 238 4.23e-17 85.5
MS.gene22580.t1 MTR_2g049200 40.248 323 166 8 289 592 441 755 5.16e-58 207
MS.gene22580.t1 MTR_2g049200 38.537 205 98 5 45 223 29 231 6.71e-33 134
MS.gene22580.t1 MTR_8g079900 33.167 401 233 9 207 592 263 643 1.73e-57 204
MS.gene22580.t1 MTR_8g079900 37.778 135 64 6 108 229 2 129 4.16e-15 79.0
MS.gene22580.t1 MTR_5g085690 35.731 431 243 9 187 593 369 789 2.75e-57 206
MS.gene22580.t1 MTR_5g085690 30.040 253 124 8 18 234 13 248 9.11e-19 90.9
MS.gene22580.t1 MTR_8g079900 33.167 401 233 9 207 592 361 741 5.18e-57 204
MS.gene22580.t1 MTR_8g079900 37.576 165 83 7 78 229 70 227 2.66e-21 99.0
MS.gene22580.t1 MTR_1g007030 39.674 368 183 13 240 592 389 732 5.25e-57 204
MS.gene22580.t1 MTR_1g007030 30.992 242 149 5 5 242 3 230 1.15e-21 100
MS.gene22580.t1 MTR_6g075370 44.628 242 115 3 325 555 421 654 1.31e-55 200
MS.gene22580.t1 MTR_6g075370 33.184 223 127 7 13 225 8 218 1.22e-22 102
MS.gene22580.t1 MTR_1g048110 38.187 364 194 11 240 592 387 730 2.74e-55 199
MS.gene22580.t1 MTR_1g048110 29.958 237 156 4 6 242 4 230 3.35e-20 95.5
MS.gene22580.t1 MTR_7g034380 38.378 370 192 11 240 595 347 694 3.90e-55 199
MS.gene22580.t1 MTR_7g034380 34.694 147 92 2 78 224 30 172 1.24e-18 90.5
MS.gene22580.t1 MTR_8g027260 40.984 305 152 9 302 592 361 651 1.11e-53 194
MS.gene22580.t1 MTR_8g027260 30.986 213 135 5 16 224 7 211 2.08e-18 89.7
MS.gene22580.t1 MTR_3g114420 34.977 426 246 11 190 592 347 764 4.17e-53 194
MS.gene22580.t1 MTR_3g114420 29.915 234 141 7 2 223 1 223 2.00e-21 99.4
MS.gene22580.t1 MTR_8g005710 39.420 345 168 10 276 592 367 698 7.05e-53 192
MS.gene22580.t1 MTR_8g005710 31.841 201 113 6 78 263 30 221 2.57e-16 83.2
MS.gene22580.t1 MTR_7g079300 40.134 299 155 9 311 592 474 765 2.67e-52 192
MS.gene22580.t1 MTR_7g079300 32.028 281 146 9 39 280 24 298 1.42e-27 118
MS.gene22580.t1 MTR_3g010080 38.511 309 168 7 290 587 429 726 4.16e-50 185
MS.gene22580.t1 MTR_3g010080 35.371 229 121 8 4 224 2 211 1.19e-23 106
MS.gene22580.t1 MTR_2g042650 37.615 327 181 7 276 592 329 642 2.47e-49 182
MS.gene22580.t1 MTR_6g055410 42.910 268 131 7 337 592 454 711 1.47e-47 177
MS.gene22580.t1 MTR_6g055410 32.796 186 102 3 57 223 30 211 7.12e-19 91.3
MS.gene22580.t1 MTR_3g464790 34.474 409 249 9 189 589 331 728 8.18e-47 176
MS.gene22580.t1 MTR_8g024370 32.947 431 240 13 201 592 336 756 2.73e-44 169
MS.gene22580.t1 MTR_8g024370 34.894 235 124 6 8 224 1 224 5.36e-33 135
MS.gene22580.t1 MTR_2g044630 34.316 373 178 13 247 592 373 705 1.31e-41 160
MS.gene22580.t1 MTR_2g044630 35.374 147 84 3 78 224 70 205 1.51e-17 87.0
MS.gene22580.t1 MTR_5g011300 72.165 97 27 0 381 477 1 97 3.49e-41 144
MS.gene22580.t1 MTR_4g127480 40.268 298 146 12 318 590 521 811 9.61e-41 158
MS.gene22580.t1 MTR_4g127480 34.356 163 86 6 80 223 88 248 9.34e-21 97.4
MS.gene22580.t1 MTR_4g126230 34.855 241 129 5 293 518 21 248 4.95e-39 144
MS.gene22580.t1 MTR_8g089230 32.593 405 226 17 230 595 452 848 4.36e-38 150
MS.gene22580.t1 MTR_8g089230 29.661 236 138 8 15 223 43 277 1.94e-18 90.1
MS.gene22580.t1 MTR_2g046740 30.370 405 236 13 230 595 444 841 1.13e-37 149
MS.gene22580.t1 MTR_2g046740 40.000 160 78 4 82 223 110 269 7.64e-23 103
MS.gene22580.t1 MTR_4g071560 39.442 251 132 6 189 425 288 532 6.67e-37 145
MS.gene22580.t1 MTR_2g042640 34.154 325 164 10 247 552 318 611 1.97e-36 144
MS.gene22580.t1 MTR_2g042640 35.503 169 102 3 59 224 17 181 1.31e-20 96.3
MS.gene22580.t1 MTR_2g037850 37.793 299 152 10 318 590 521 811 1.98e-35 142
MS.gene22580.t1 MTR_2g037850 36.420 162 82 6 82 224 90 249 2.26e-21 99.4
MS.gene22580.t1 MTR_2g070260 40.887 203 107 5 381 580 1 193 2.91e-35 132
MS.gene22580.t1 MTR_3g452290 37.903 248 109 6 354 592 357 568 2.43e-33 135
MS.gene22580.t1 MTR_3g452290 37.500 128 76 2 115 242 9 132 1.71e-15 80.1
MS.gene22580.t1 MTR_3g451220 37.903 248 109 6 354 592 357 568 2.43e-33 135
MS.gene22580.t1 MTR_3g451220 37.500 128 76 2 115 242 9 132 1.71e-15 80.1
MS.gene22580.t1 MTR_4g132620 34.397 282 161 8 328 593 542 815 8.54e-33 134
MS.gene22580.t1 MTR_4g132620 30.672 238 133 9 12 223 17 248 7.68e-19 91.3
MS.gene22580.t1 MTR_3g114410 37.931 232 134 3 189 413 353 581 1.41e-32 132
MS.gene22580.t1 MTR_3g114410 33.498 203 117 6 36 225 29 226 7.15e-22 100
MS.gene22580.t1 MTR_8g042710 39.076 238 129 4 185 413 355 585 6.92e-32 131
MS.gene22580.t1 MTR_8g042710 34.500 200 109 7 45 223 26 224 4.72e-21 97.8
MS.gene22580.t1 MTR_4g053665 35.178 253 114 9 347 592 1 210 1.89e-31 122
MS.gene22580.t1 MTR_3g114140 36.576 257 135 7 311 548 174 421 2.06e-30 124
MS.gene22580.t1 MTR_5g044060 47.794 136 58 3 318 442 3 136 1.96e-28 112
MS.gene22580.t1 MTR_7g079295 33.333 231 120 8 39 238 24 251 8.55e-26 111
MS.gene22580.t1 MTR_7g079295 34.416 154 87 5 446 592 363 509 5.74e-16 81.3
MS.gene22580.t1 MTR_5g081130 33.939 165 99 3 434 594 15 173 2.19e-22 95.9
MS.gene22580.t1 MTR_7g097250 39.007 141 68 2 258 398 54 176 4.98e-19 85.5
MS.gene22580.t1 MTR_5g081100 34.946 186 90 5 42 223 1 159 8.95e-19 89.4
MS.gene22580.t1 MTR_5g011380 82.222 45 8 0 550 594 14 58 5.44e-18 79.0
MS.gene22580.t1 MTR_4g118440 27.642 246 116 7 346 579 1 196 1.57e-17 82.4
MS.gene22580.t1 MTR_7g081660 37.368 190 100 8 411 592 374 552 6.10e-16 81.6
MS.gene22580.t1 MTR_5g081280 38.095 147 64 7 85 223 62 189 7.54e-16 79.0
MS.gene22580.t1 MTR_8g092940 33.838 198 113 8 85 271 32 222 4.00e-15 75.5
MS.gene22580.t1 MTR_3g065240 29.098 244 95 9 240 477 85 256 6.12e-14 72.8
MS.gene22580.t1 MTR_3g114160 37.143 105 66 0 81 185 7 111 7.29e-14 73.9
MS.gene22580.t1 MTR_8g027660 30.882 204 114 6 392 592 67 246 7.83e-14 72.0
MS.gene22580.t1 MTR_3g005755 72.500 40 11 0 373 412 238 277 5.64e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22580.t1 AT1G04110 46.803 391 186 9 222 595 388 773 5.85e-103 329
MS.gene22580.t1 AT1G04110 37.500 208 100 7 44 223 27 232 2.17e-29 124
MS.gene22580.t1 AT2G05920 45.479 376 192 7 226 591 376 748 1.06e-95 309
MS.gene22580.t1 AT2G05920 38.614 202 102 6 38 223 23 218 2.70e-23 105
MS.gene22580.t1 AT5G67360 43.896 385 202 7 218 592 374 754 3.14e-90 295
MS.gene22580.t1 AT5G67360 33.942 274 146 11 8 257 1 263 1.33e-30 127
MS.gene22580.t1 AT3G14240 41.071 392 209 7 225 595 382 772 5.69e-87 286
MS.gene22580.t1 AT3G14240 36.869 198 107 5 44 225 27 222 5.70e-28 119
MS.gene22580.t1 AT4G34980 41.538 390 204 7 222 592 374 758 2.22e-85 282
MS.gene22580.t1 AT4G34980 36.052 233 116 9 8 224 1 216 2.82e-30 127
MS.gene22580.t1 AT3G14067 40.979 388 211 8 222 592 381 767 7.41e-82 273
MS.gene22580.t1 AT3G14067 37.500 200 105 4 42 223 30 227 7.90e-37 147
MS.gene22580.t1 AT1G01900 40.984 427 224 10 186 595 359 774 1.41e-80 270
MS.gene22580.t1 AT1G01900 36.139 202 98 7 44 223 43 235 4.71e-27 117
MS.gene22580.t1 AT5G51750 39.801 402 224 6 206 594 380 776 1.70e-80 269
MS.gene22580.t1 AT5G51750 34.191 272 141 10 16 255 11 276 3.46e-28 120
MS.gene22580.t1 AT2G04160 38.835 412 239 6 189 592 364 770 6.36e-75 254
MS.gene22580.t1 AT2G04160 33.149 181 105 3 61 225 55 235 2.34e-21 99.0
MS.gene22580.t1 AT5G59810 38.978 372 212 7 229 592 410 774 5.96e-71 243
MS.gene22580.t1 AT5G59810 32.353 204 114 5 44 225 41 242 4.76e-21 98.2
MS.gene22580.t1 AT5G45650 40.053 377 206 6 228 592 420 788 6.96e-69 238
MS.gene22580.t1 AT5G45650 30.417 240 106 8 32 224 21 246 6.50e-23 103
MS.gene22580.t1 AT5G45650 40.053 377 206 6 228 592 420 788 6.96e-69 238
MS.gene22580.t1 AT5G45650 30.417 240 106 8 32 224 21 246 6.50e-23 103
MS.gene22580.t1 AT1G32960 39.058 361 208 6 237 592 412 765 2.88e-62 220
MS.gene22580.t1 AT1G32960 38.725 204 98 6 45 225 33 232 2.24e-28 121
MS.gene22580.t1 AT4G10520 40.000 360 202 7 237 592 395 744 5.11e-62 219
MS.gene22580.t1 AT4G10520 32.353 238 133 5 8 225 1 230 6.71e-27 116
MS.gene22580.t1 AT1G20160 35.476 420 245 12 190 592 312 722 9.15e-62 218
MS.gene22580.t1 AT1G20160 32.178 202 109 7 81 267 28 216 1.36e-17 87.0
MS.gene22580.t1 AT1G20160 35.476 420 245 12 190 592 351 761 1.07e-61 218
MS.gene22580.t1 AT1G20160 31.553 206 113 7 77 267 63 255 1.29e-17 87.4
MS.gene22580.t1 AT4G10540 39.130 414 227 11 189 592 365 763 1.59e-61 218
MS.gene22580.t1 AT4G10540 34.310 239 131 7 15 233 6 238 5.36e-28 119
MS.gene22580.t1 AT4G10550 39.669 363 202 8 237 592 430 782 5.18e-61 216
MS.gene22580.t1 AT4G10550 33.929 224 123 6 30 233 40 258 2.17e-26 115
MS.gene22580.t1 AT4G10550 39.669 363 202 8 237 592 358 710 6.55e-61 215
MS.gene22580.t1 AT4G10550 37.500 176 90 4 69 225 4 178 1.08e-24 109
MS.gene22580.t1 AT4G10550 39.669 363 202 8 237 592 358 710 6.55e-61 215
MS.gene22580.t1 AT4G10550 37.500 176 90 4 69 225 4 178 1.08e-24 109
MS.gene22580.t1 AT5G59090 37.783 397 204 12 213 592 356 726 7.46e-61 215
MS.gene22580.t1 AT5G59090 45.205 146 70 4 80 223 68 205 1.03e-26 115
MS.gene22580.t1 AT4G10550 39.669 363 202 8 237 592 414 766 7.99e-61 216
MS.gene22580.t1 AT4G10550 32.129 249 140 7 5 233 3 242 6.15e-28 119
MS.gene22580.t1 AT4G26330 40.123 324 171 9 288 594 406 723 8.86e-61 215
MS.gene22580.t1 AT4G26330 32.317 164 90 5 81 223 21 184 3.99e-15 79.3
MS.gene22580.t1 AT4G26330 40.123 324 171 9 288 594 420 737 9.24e-61 215
MS.gene22580.t1 AT4G26330 30.899 178 88 7 81 223 21 198 4.22e-12 69.7
MS.gene22580.t1 AT5G59090 37.783 397 204 12 213 592 358 728 9.28e-61 215
MS.gene22580.t1 AT5G59090 45.205 146 72 3 80 223 68 207 4.39e-28 120
MS.gene22580.t1 AT1G32970 44.156 308 162 5 289 592 421 722 1.82e-60 214
MS.gene22580.t1 AT1G32950 39.889 361 205 6 237 592 357 710 3.51e-60 213
MS.gene22580.t1 AT1G32950 39.080 174 89 4 69 225 4 177 5.58e-25 110
MS.gene22580.t1 AT5G59090 37.531 397 200 12 213 592 358 723 3.60e-60 213
MS.gene22580.t1 AT5G59090 45.205 146 72 3 80 223 68 207 4.04e-28 120
MS.gene22580.t1 AT1G32950 39.889 361 205 6 237 592 408 761 3.70e-60 214
MS.gene22580.t1 AT1G32950 37.186 199 107 5 45 225 30 228 7.48e-27 116
MS.gene22580.t1 AT4G10510 40.166 361 204 6 237 592 341 694 2.55e-59 210
MS.gene22580.t1 AT4G10510 35.366 164 86 4 81 225 1 163 1.32e-19 93.6
MS.gene22580.t1 AT4G10510 40.166 361 204 6 237 592 356 709 2.82e-59 211
MS.gene22580.t1 AT4G10510 34.659 176 95 4 69 225 4 178 6.64e-20 94.4
MS.gene22580.t1 AT4G00230 35.878 393 217 11 214 592 372 743 3.16e-59 211
MS.gene22580.t1 AT4G00230 42.038 157 73 5 78 223 71 220 2.20e-23 105
MS.gene22580.t1 AT4G10510 40.166 361 204 6 237 592 400 753 3.26e-59 211
MS.gene22580.t1 AT4G10510 32.843 204 116 5 42 225 20 222 1.41e-21 99.8
MS.gene22580.t1 AT4G10510 40.166 361 204 6 237 592 412 765 3.58e-59 211
MS.gene22580.t1 AT4G10510 30.290 241 139 6 5 225 3 234 1.34e-21 99.8
MS.gene22580.t1 AT1G20150 37.824 386 213 9 230 595 395 773 3.71e-59 211
MS.gene22580.t1 AT1G20150 38.125 160 79 6 85 225 69 227 1.16e-17 87.4
MS.gene22580.t1 AT1G32940 38.611 360 211 5 237 592 358 711 7.97e-59 209
MS.gene22580.t1 AT1G32940 40.341 176 85 5 69 225 4 178 3.19e-26 114
MS.gene22580.t1 AT1G32940 38.611 360 211 5 237 592 358 711 7.97e-59 209
MS.gene22580.t1 AT1G32940 40.341 176 85 5 69 225 4 178 3.19e-26 114
MS.gene22580.t1 AT1G32940 38.611 360 211 5 237 592 409 762 8.54e-59 210
MS.gene22580.t1 AT1G32940 36.771 223 113 7 31 233 23 237 2.07e-28 121
MS.gene22580.t1 AT5G59120 36.935 398 206 12 213 592 357 727 2.73e-58 208
MS.gene22580.t1 AT5G59120 38.122 181 104 3 45 223 32 206 1.71e-25 112
MS.gene22580.t1 AT4G21630 38.462 377 206 8 224 592 395 753 3.30e-58 208
MS.gene22580.t1 AT4G21630 33.333 246 133 7 10 225 5 249 5.18e-26 113
MS.gene22580.t1 AT4G21640 42.295 305 159 6 296 592 432 727 4.24e-57 205
MS.gene22580.t1 AT4G21640 30.078 256 145 7 1 225 1 253 7.70e-24 107
MS.gene22580.t1 AT5G58840 37.433 374 206 11 234 592 346 706 6.85e-57 204
MS.gene22580.t1 AT5G58840 41.667 144 80 1 80 223 71 210 5.88e-26 113
MS.gene22580.t1 AT5G59190 38.012 342 177 10 230 557 336 656 2.16e-56 202
MS.gene22580.t1 AT5G59190 40.523 153 87 2 81 233 32 180 2.60e-24 108
MS.gene22580.t1 AT4G21650 40.705 312 168 6 289 592 458 760 1.43e-55 201
MS.gene22580.t1 AT4G21650 34.286 210 109 5 45 225 42 251 9.16e-26 112
MS.gene22580.t1 AT5G59100 35.714 378 208 12 229 592 381 737 2.76e-55 200
MS.gene22580.t1 AT5G59100 44.966 149 77 3 78 223 68 214 1.46e-28 121
MS.gene22580.t1 AT5G03620 36.842 399 211 13 221 595 379 760 3.28e-55 200
MS.gene22580.t1 AT5G03620 33.333 216 131 7 17 223 9 220 1.10e-23 106
MS.gene22580.t1 AT5G45640 37.598 383 214 9 224 592 380 751 4.44e-55 199
MS.gene22580.t1 AT5G45640 32.000 175 76 6 90 224 39 210 1.22e-14 77.8
MS.gene22580.t1 AT1G66220 38.841 345 190 8 256 595 419 747 1.13e-54 198
MS.gene22580.t1 AT1G66220 36.634 202 107 5 45 225 38 239 5.65e-26 113
MS.gene22580.t1 AT5G58830 41.196 301 152 9 305 592 417 705 2.11e-54 197
MS.gene22580.t1 AT5G58830 40.411 146 79 3 80 223 69 208 6.41e-24 107
MS.gene22580.t1 AT5G67090 35.519 366 200 9 233 585 377 719 2.34e-54 197
MS.gene22580.t1 AT5G67090 37.824 193 104 4 45 223 25 215 5.36e-31 129
MS.gene22580.t1 AT1G66210 40.000 335 177 9 266 592 432 750 4.84e-54 196
MS.gene22580.t1 AT1G66210 31.174 247 135 7 8 225 1 241 4.72e-25 110
MS.gene22580.t1 AT3G46850 37.433 374 203 12 229 592 382 734 6.04e-54 196
MS.gene22580.t1 AT3G46850 32.669 251 156 4 10 250 1 248 2.03e-29 124
MS.gene22580.t1 AT5G11940 40.260 308 176 4 289 592 449 752 7.25e-54 196
MS.gene22580.t1 AT5G11940 32.653 245 138 7 1 225 1 238 7.13e-25 110
MS.gene22580.t1 AT3G46840 35.294 374 211 10 229 592 382 734 5.39e-53 193
MS.gene22580.t1 AT3G46840 34.579 214 132 4 14 223 6 215 6.60e-27 116
MS.gene22580.t1 AT4G10530 37.466 363 188 10 240 592 402 735 5.65e-53 193
MS.gene22580.t1 AT4G10530 32.773 238 132 6 8 225 1 230 5.67e-27 116
MS.gene22580.t1 AT4G21326 40.323 310 175 5 290 595 387 690 4.43e-52 190
MS.gene22580.t1 AT4G21326 33.537 164 93 4 78 225 13 176 3.67e-22 101
MS.gene22580.t1 AT5G59130 36.997 373 201 11 230 592 338 686 1.08e-51 189
MS.gene22580.t1 AT5G59130 42.466 146 76 3 80 223 32 171 1.54e-25 112
MS.gene22580.t1 AT5G59130 36.997 373 201 11 230 592 377 725 1.15e-51 189
MS.gene22580.t1 AT5G59130 33.953 215 124 5 11 223 12 210 2.50e-26 114
MS.gene22580.t1 AT5G59130 36.997 373 201 11 230 592 373 721 1.27e-51 189
MS.gene22580.t1 AT5G59130 34.419 215 119 6 11 223 12 206 1.42e-25 112
MS.gene22580.t1 AT5G58820 40.199 301 153 10 305 592 414 700 1.77e-51 189
MS.gene22580.t1 AT5G58820 43.836 146 74 3 80 223 65 204 1.24e-26 115
MS.gene22580.t1 AT5G59130 40.328 305 156 9 298 592 427 715 2.31e-50 186
MS.gene22580.t1 AT5G59130 33.953 215 124 5 11 223 12 210 2.31e-26 114
MS.gene22580.t1 AT4G21323 35.338 399 241 12 201 592 405 793 3.78e-48 180
MS.gene22580.t1 AT4G21323 36.994 173 88 4 81 233 118 289 6.20e-24 107
MS.gene22580.t1 AT4G15040 35.372 376 205 11 230 592 335 685 5.55e-44 167
MS.gene22580.t1 AT4G15040 38.462 156 90 2 78 233 30 179 1.45e-20 96.7
MS.gene22580.t1 AT4G15040 35.372 376 205 11 230 592 335 685 5.55e-44 167
MS.gene22580.t1 AT4G15040 38.462 156 90 2 78 233 30 179 1.45e-20 96.7
MS.gene22580.t1 AT4G30020 30.131 458 261 19 175 590 369 809 9.20e-41 159
MS.gene22580.t1 AT4G30020 32.927 164 88 6 80 223 84 245 2.01e-16 83.6
MS.gene22580.t1 AT4G30020 30.131 458 261 19 175 590 369 809 9.20e-41 159
MS.gene22580.t1 AT4G30020 32.927 164 88 6 80 223 84 245 2.01e-16 83.6
MS.gene22580.t1 AT4G30020 30.131 458 261 19 175 590 369 809 9.20e-41 159
MS.gene22580.t1 AT4G30020 32.927 164 88 6 80 223 84 245 2.01e-16 83.6
MS.gene22580.t1 AT4G30020 30.131 458 261 19 175 590 369 809 9.20e-41 159
MS.gene22580.t1 AT4G30020 32.927 164 88 6 80 223 84 245 2.01e-16 83.6
MS.gene22580.t1 AT2G39850 36.678 289 146 12 329 592 489 765 7.79e-40 155
MS.gene22580.t1 AT2G39850 37.662 154 79 7 79 224 63 207 1.13e-17 87.4
MS.gene22580.t1 AT1G32980 46.237 186 93 4 377 558 3 185 1.54e-39 143
MS.gene22580.t1 AT2G19170 31.540 409 226 17 224 590 412 808 2.80e-39 154
MS.gene22580.t1 AT2G19170 34.146 164 85 6 80 223 84 244 7.60e-19 91.3
MS.gene22580.t1 AT2G19170 31.540 409 226 17 224 590 412 808 2.80e-39 154
MS.gene22580.t1 AT2G19170 34.146 164 85 6 80 223 84 244 7.60e-19 91.3
MS.gene22580.t1 AT5G44530 30.808 396 224 15 240 595 451 836 4.69e-39 154
MS.gene22580.t1 AT5G44530 38.037 163 77 6 82 223 106 265 9.08e-21 97.4
MS.gene22580.t1 AT5G44530 29.454 421 222 17 240 595 451 861 1.55e-35 143
MS.gene22580.t1 AT5G44530 38.037 163 77 6 82 223 106 265 7.94e-21 97.4
MS.gene22580.t1 AT1G30600 31.407 398 222 18 240 595 441 829 2.25e-34 139
MS.gene22580.t1 AT1G30600 32.721 272 132 11 8 233 1 267 2.45e-23 105
MS.gene22580.t1 AT4G20430 33.333 288 163 11 328 595 573 851 5.69e-34 138
MS.gene22580.t1 AT4G20430 34.302 172 92 5 82 233 119 289 7.73e-20 94.4
MS.gene22580.t1 AT4G20430 33.333 288 163 11 328 595 573 851 5.69e-34 138
MS.gene22580.t1 AT4G20430 34.302 172 92 5 82 233 119 289 7.73e-20 94.4
MS.gene22580.t1 AT4G20430 33.333 288 163 11 328 595 549 827 6.86e-34 138
MS.gene22580.t1 AT4G20430 34.302 172 92 5 82 233 119 289 7.56e-20 94.4
MS.gene22580.t1 AT1G62340 38.571 280 150 11 328 592 557 829 2.03e-33 136
MS.gene22580.t1 AT1G62340 32.530 166 87 7 82 223 98 262 3.62e-13 73.2
MS.gene22580.t1 AT5G03620 44.118 204 99 5 221 414 379 577 5.01e-33 134
MS.gene22580.t1 AT5G03620 33.333 216 131 7 17 223 9 220 6.22e-24 106
MS.gene22580.t1 AT4G00230 39.437 213 111 5 214 418 372 574 1.36e-32 133
MS.gene22580.t1 AT4G00230 42.038 157 73 6 78 223 71 220 1.48e-23 105
MS.gene22580.t1 AT1G32940 38.806 201 102 6 45 225 30 229 3.01e-28 120
MS.gene22580.t1 AT1G32940 38.889 180 106 2 237 414 409 586 3.13e-25 110
MS.gene22580.t1 AT5G58840 41.667 144 80 1 80 223 71 210 1.78e-26 113
MS.gene22580.t1 AT5G58840 38.624 189 105 4 234 413 346 532 1.93e-26 114
MS.gene22580.t1 AT5G58840 41.667 144 80 1 80 223 71 210 4.15e-26 113
MS.gene22580.t1 AT5G59110 36.585 164 94 4 437 594 8 167 4.38e-23 97.1
MS.gene22580.t1 AT5G44530 38.037 163 77 6 82 223 106 265 1.03e-20 96.7
MS.gene22580.t1 AT1G20160 32.178 202 109 7 81 267 67 255 1.65e-17 86.3
MS.gene22580.t1 AT1G20160 30.625 160 108 2 190 348 351 508 3.11e-12 69.7

Find 124 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGGATCATTTGCTTTAAC+AGG 0.265358 5.2:+4051009 None:intergenic
AACTCACAGTCCAACTTTCT+TGG 0.265626 5.2:-4052450 MS.gene22580:CDS
TTATTCAAAGGAACAGTAAT+TGG 0.277826 5.2:-4051387 MS.gene22580:CDS
CCTTCTTTCTCTATTCTGTT+GGG 0.284617 5.2:-4050844 MS.gene22580:CDS
CAGCAAATACTGATGTAATT+TGG 0.285021 5.2:+4052747 None:intergenic
CTTGGAAAAGGTGTCATAAT+TGG 0.287279 5.2:-4052389 MS.gene22580:CDS
TGAATTTATACCACAAATAA+AGG 0.290855 5.2:-4050665 MS.gene22580:CDS
TGTTCCTTATTTGTGTGGTT+TGG 0.295390 5.2:-4050956 MS.gene22580:CDS
GGATAATTCAGTTGAGCTTC+TGG 0.309776 5.2:+4050865 None:intergenic
TGCCGCCACCACCTGCAAAA+TGG 0.312039 5.2:-4052313 MS.gene22580:CDS
TGAAGAGACATGGCCTCTTC+TGG 0.313100 5.2:+4052527 None:intergenic
TCCTTCTTTCTCTATTCTGT+TGG 0.316195 5.2:-4050845 MS.gene22580:CDS
GTTCCTTATTTGTGTGGTTT+GGG 0.319903 5.2:-4050955 MS.gene22580:CDS
CCTCGGCGGGATCCCTATAC+TGG 0.329513 5.2:-4051085 MS.gene22580:CDS
CTTGAAGTACCTTTGGCTTT+GGG 0.329870 5.2:-4050751 MS.gene22580:CDS
CGCTCAGGGTTCTCTCACTT+GGG 0.331898 5.2:-4050620 MS.gene22580:CDS
TCGCTCAGGGTTCTCTCACT+TGG 0.332754 5.2:-4050621 MS.gene22580:CDS
TGTAATGAAAGTGTCCTTTC+AGG 0.333163 5.2:+4052476 None:intergenic
TAAGAATTCCCGGACTTTCT+TGG 0.338489 5.2:+4051316 None:intergenic
AATCAGTCTTTGTGTCTTCC+AGG 0.338756 5.2:-4051660 MS.gene22580:CDS
TAACCCAAACCACACAAATA+AGG 0.363311 5.2:+4050952 None:intergenic
AATCAGAAGATTTGCATAGT+TGG 0.366643 5.2:-4052643 MS.gene22580:CDS
ATAGCGGCTGGCGACCAATC+AGG 0.369574 5.2:+4051144 None:intergenic
AGTTGAACTTGAAGTACCTT+TGG 0.373834 5.2:-4050758 MS.gene22580:CDS
ACTTGAAGTACCTTTGGCTT+TGG 0.383368 5.2:-4050752 MS.gene22580:CDS
ATGTCTGGTTTAAGAATTCC+CGG 0.398892 5.2:+4051306 None:intergenic
AGGACCAAGCCAAGAAAGTC+CGG 0.402006 5.2:-4051325 MS.gene22580:CDS
ACTCACAGTCCAACTTTCTT+GGG 0.407161 5.2:-4052449 MS.gene22580:CDS
CCCAACATTAGTCAAGGTTC+TGG 0.411861 5.2:+4050801 None:intergenic
TCAAAAGTTCTCACCCTGAT+TGG 0.411956 5.2:-4051158 MS.gene22580:CDS
ACCAGAACCTTGACTAATGT+TGG 0.414293 5.2:-4050802 MS.gene22580:CDS
GGACAAGAAGTTCTAAATTC+AGG 0.414650 5.2:-4051561 MS.gene22580:CDS
TGAAGCAAGGGCAAGGGTTG+TGG 0.418304 5.2:-4052424 MS.gene22580:CDS
CAATGTTGCTGATGGATTGT+AGG 0.425691 5.2:+4051410 None:intergenic
ATTCCCGGACTTTCTTGGCT+TGG 0.425710 5.2:+4051321 None:intergenic
ATTCTTAAACCAGACATCAT+TGG 0.434865 5.2:-4051300 MS.gene22580:CDS
TCTTACCGCCATGTAGCCTC+TGG 0.437407 5.2:-4052569 MS.gene22580:CDS
TCGTTGAATGATGGATGATA+AGG 0.440505 5.2:+4052344 None:intergenic
TGCTTCAGACCCAAGAAAGT+TGG 0.445653 5.2:+4052440 None:intergenic
AAAAGCCTTTGATCCAGTAT+AGG 0.446877 5.2:+4051072 None:intergenic
AAAGCCTTTGATCCAGTATA+GGG 0.451944 5.2:+4051073 None:intergenic
AAGGAATCAAACTTTCGCTC+AGG 0.453044 5.2:-4050635 MS.gene22580:CDS
TGACAGCTGCATAGTGTAGT+TGG 0.454099 5.2:+4052808 None:intergenic
CCAGAACCTTGACTAATGTT+GGG 0.456402 5.2:-4050801 MS.gene22580:CDS
TTGAATAACAATGTTGCTGA+TGG 0.457510 5.2:+4051402 None:intergenic
AAAGTAGTGGTGTGTGATGT+TGG 0.463897 5.2:-4051609 MS.gene22580:CDS
ATTTCCTCACAAGGACAGAA+TGG 0.476874 5.2:-4052597 MS.gene22580:CDS
TTGAATATCATAAACAAGAC+CGG 0.483041 5.2:+4050990 None:intergenic
CGTTGAATGATGGATGATAA+GGG 0.484847 5.2:+4052345 None:intergenic
CTTCTTTCTCTATTCTGTTG+GGG 0.489382 5.2:-4050843 MS.gene22580:CDS
ACACCTGGACCAATGATGTC+TGG 0.493455 5.2:+4051291 None:intergenic
CTGCAAATCCAGAGGCTACA+TGG 0.494461 5.2:+4052561 None:intergenic
CTTGCAAATTCAGAAACACT+TGG 0.495544 5.2:-4051522 MS.gene22580:CDS
TGTCAACATTCTAGCTGCAT+GGG 0.495734 5.2:-4051271 MS.gene22580:CDS
CAAGTGTTTCTGAATTTGCA+AGG 0.496447 5.2:+4051523 None:intergenic
ATGCAAATCTTCTGATTGAA+AGG 0.503608 5.2:+4052649 None:intergenic
CATCCATCATTCAACGATGA+AGG 0.504008 5.2:-4052338 MS.gene22580:CDS
TCAGTGAATGTTATTTCACT+TGG 0.504064 5.2:+4050715 None:intergenic
CCGGAAACAATGTTAAAAGC+TGG 0.504347 5.2:+4051225 None:intergenic
TGGTTTCAGCACTTCTGCTA+CGG 0.505784 5.2:-4051502 MS.gene22580:CDS
TTGGGTCTGAAGCAAGGGCA+AGG 0.512292 5.2:-4052431 MS.gene22580:CDS
CTTTCTTGGGTCTGAAGCAA+GGG 0.513397 5.2:-4052436 MS.gene22580:CDS
ACTTTCTTGGGTCTGAAGCA+AGG 0.515460 5.2:-4052437 MS.gene22580:CDS
ATCTTTCTCTTGAAGAGACA+TGG 0.517045 5.2:+4052517 None:intergenic
GTGTCAACATTCTAGCTGCA+TGG 0.517651 5.2:-4051272 MS.gene22580:CDS
CAAATACTCTCAACCTCGGC+GGG 0.518464 5.2:-4051098 MS.gene22580:CDS
CAGCAGCAGTGTGTGTTCCA+TGG 0.520277 5.2:+4052183 None:intergenic
ATTCCTTCATCGTTGAATGA+TGG 0.520909 5.2:+4052335 None:intergenic
CACACTGCTGCTGAGGCTGC+AGG 0.522441 5.2:-4052173 MS.gene22580:CDS
AAAGGCCATTGCGAATTCAC+TGG 0.527872 5.2:-4052290 MS.gene22580:CDS
TACATCAGTATTTGCTGCAG+AGG 0.530978 5.2:-4052741 MS.gene22580:CDS
AAATAAGGAACATAATCTTC+AGG 0.532280 5.2:+4050967 None:intergenic
GATTATGTTCCTTATTTGTG+TGG 0.533035 5.2:-4050961 MS.gene22580:CDS
TGTCTGATAAACATGCTGTT+AGG 0.536213 5.2:-4050597 MS.gene22580:CDS
TGCAAACCCAACATTAGTCA+AGG 0.536374 5.2:+4050795 None:intergenic
AATGATGATAACCTTGGAAA+AGG 0.537148 5.2:-4052401 MS.gene22580:CDS
TCAGCAACATTGTTATTCAA+AGG 0.538852 5.2:-4051399 MS.gene22580:CDS
AGGAATCAAACTTTCGCTCA+GGG 0.551286 5.2:-4050634 MS.gene22580:CDS
AAACCAGACATCATTGGTCC+AGG 0.552481 5.2:-4051294 MS.gene22580:CDS
TAGCGGCTGGCGACCAATCA+GGG 0.554928 5.2:+4051145 None:intergenic
TGGGTCTGAAGCAAGGGCAA+GGG 0.558985 5.2:-4052430 MS.gene22580:CDS
CCCAACAGAATAGAGAAAGA+AGG 0.564665 5.2:+4050844 None:intergenic
GAAGAAAAGTAAACAACAGA+AGG 0.566636 5.2:+4051351 None:intergenic
AGGACAAGACATTGAAGTAC+CGG 0.567678 5.2:+4051206 None:intergenic
ATGTCTTGTCCTCACCTAAG+TGG 0.567792 5.2:-4051195 MS.gene22580:CDS
AGATTGAAGTTATTGTTCAG+TGG 0.577992 5.2:-4050918 MS.gene22580:CDS
CCACCACCTGCAAAATGGAA+AGG 0.578029 5.2:-4052308 MS.gene22580:CDS
TGGAACACACACTGCTGCTG+AGG 0.580264 5.2:-4052180 MS.gene22580:CDS
CCTGTTAAAGCAAATGATCC+CGG 0.580345 5.2:-4051009 MS.gene22580:CDS
GGACCAAGCCAAGAAAGTCC+GGG 0.581334 5.2:-4051324 MS.gene22580:CDS
CACAAATAAAGGAAAACAGA+AGG 0.583247 5.2:-4050654 MS.gene22580:CDS
CGTGTTTCAACCATTGTGAA+AGG 0.583936 5.2:-4051582 MS.gene22580:CDS
GTTCAAGTGAGTTACACTGC+TGG 0.583945 5.2:-4051462 MS.gene22580:CDS
ATATGCAATAATAAGCTCAT+CGG 0.583974 5.2:-4052260 MS.gene22580:CDS
TCCCTCCAGTGAATTCGCAA+TGG 0.587526 5.2:+4052285 None:intergenic
GTGTAACTCACTTGAACCGC+AGG 0.599809 5.2:+4051468 None:intergenic
TCAATGCAGCAATACCACTT+AGG 0.599841 5.2:+4051181 None:intergenic
GGATCCCTATACTGGATCAA+AGG 0.600812 5.2:-4051077 MS.gene22580:CDS
AACTTCTTGTCCTTTCACAA+TGG 0.606019 5.2:+4051572 None:intergenic
CCGGTAGCGAAAATATCAGC+CGG 0.608618 5.2:+4051048 None:intergenic
AGGATTAACATGTCCTGCAC+CGG 0.613274 5.2:+4051029 None:intergenic
TGAATATCATAAACAAGACC+GGG 0.615921 5.2:+4050991 None:intergenic
GCAGCTAGAATGTTGACACC+TGG 0.616490 5.2:+4051276 None:intergenic
GCCATTGCGAATTCACTGGA+GGG 0.616641 5.2:-4052286 MS.gene22580:CDS
ATTCACTGAGGTAAATGAGA+AGG 0.616902 5.2:-4050701 MS.gene22580:CDS
AGTGAAGCTGACACCAGAAG+AGG 0.623327 5.2:-4052540 MS.gene22580:CDS
AAAACCATTCTGTCCTTGTG+AGG 0.626249 5.2:+4052593 None:intergenic
AGTAAACAACAGAAGGTGCG+AGG 0.626458 5.2:+4051358 None:intergenic
GGCCATTGCGAATTCACTGG+AGG 0.628448 5.2:-4052287 MS.gene22580:CDS
TTGTGGAATGATGATAACCT+TGG 0.635157 5.2:-4052407 MS.gene22580:CDS
ACTGCAAATACTCTCAACCT+CGG 0.640806 5.2:-4051102 MS.gene22580:CDS
GTAAACAACAGAAGGTGCGA+GGG 0.648718 5.2:+4051359 None:intergenic
ACACTCATACCCAAAGCCAA+AGG 0.650995 5.2:+4050742 None:intergenic
ATAATTGGAGTCATAGACAC+AGG 0.654161 5.2:-4052374 MS.gene22580:CDS
GTAGTGGTGTGTGATGTTGG+AGG 0.665089 5.2:-4051606 MS.gene22580:CDS
CAGCTTCACTGCAAATCCAG+AGG 0.669476 5.2:+4052553 None:intergenic
GTCAACATTCTAGCTGCATG+GGG 0.672811 5.2:-4051270 MS.gene22580:CDS
CCAGTATAGGGATCCCGCCG+AGG 0.680914 5.2:+4051085 None:intergenic
GCAAATACTCTCAACCTCGG+CGG 0.682944 5.2:-4051099 MS.gene22580:CDS
TGATCTGAGTGGAAAAGTAG+TGG 0.685674 5.2:-4051622 MS.gene22580:CDS
CAAGAAGTTCTAAATTCAGG+CGG 0.691762 5.2:-4051558 MS.gene22580:CDS
GCAGCAATACCACTTAGGTG+AGG 0.726862 5.2:+4051186 None:intergenic
AAGTGAAATAACATTCACTG+AGG 0.755767 5.2:-4050713 MS.gene22580:CDS
CAAATCCAGAGGCTACATGG+CGG 0.781016 5.2:+4052564 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATTTATACCACAAATAA+AGG - chr5.2:4052723-4052742 MS.gene22580:CDS 20.0%
! AAATAAGGAACATAATCTTC+AGG + chr5.2:4052424-4052443 None:intergenic 25.0%
! AATTGTTCAGAAAAGTCTTT+CGG + chr5.2:4051659-4051678 None:intergenic 25.0%
! ATATGCAATAATAAGCTCAT+CGG - chr5.2:4051128-4051147 MS.gene22580:CDS 25.0%
! CACTTAAAAATGACAGATAT+TGG + chr5.2:4052820-4052839 None:intergenic 25.0%
! TTAAAAAACATTGATCTGAG+TGG - chr5.2:4051755-4051774 MS.gene22580:intron 25.0%
! TTATTCAAAGGAACAGTAAT+TGG - chr5.2:4052001-4052020 MS.gene22580:intron 25.0%
! TTGAATATCATAAACAAGAC+CGG + chr5.2:4052401-4052420 None:intergenic 25.0%
!! AATTTTTCTATCAATTGTGC+TGG + chr5.2:4051579-4051598 None:intergenic 25.0%
!! ATTTTTGTGGAAGAAATGAA+TGG + chr5.2:4050773-4050792 None:intergenic 25.0%
!!! ACTCAGATCAATGTTTTTTA+AGG + chr5.2:4051756-4051775 None:intergenic 25.0%
AAGTGAAATAACATTCACTG+AGG - chr5.2:4052675-4052694 MS.gene22580:CDS 30.0%
AATCAGAAGATTTGCATAGT+TGG - chr5.2:4050745-4050764 MS.gene22580:CDS 30.0%
AATGATGATAACCTTGGAAA+AGG - chr5.2:4050987-4051006 MS.gene22580:CDS 30.0%
AGATTGAAGTTATTGTTCAG+TGG - chr5.2:4052470-4052489 MS.gene22580:CDS 30.0%
ATGCAAATCTTCTGATTGAA+AGG + chr5.2:4050742-4050761 None:intergenic 30.0%
ATTCTTAAACCAGACATCAT+TGG - chr5.2:4052088-4052107 MS.gene22580:intron 30.0%
CACAAATAAAGGAAAACAGA+AGG - chr5.2:4052734-4052753 MS.gene22580:CDS 30.0%
CAGCAAATACTGATGTAATT+TGG + chr5.2:4050644-4050663 None:intergenic 30.0%
CCATTTGAAAAACATTTCCA+TGG - chr5.2:4051188-4051207 MS.gene22580:CDS 30.0%
GAAGAAAAGTAAACAACAGA+AGG + chr5.2:4052040-4052059 None:intergenic 30.0%
GGAAATGGAAATGAATATGA+AGG - chr5.2:4051617-4051636 MS.gene22580:CDS 30.0%
TGAATATCATAAACAAGACC+GGG + chr5.2:4052400-4052419 None:intergenic 30.0%
TTGAATAACAATGTTGCTGA+TGG + chr5.2:4051989-4052008 None:intergenic 30.0%
! ATGGATATTGCTATTGAAGA+TGG - chr5.2:4051374-4051393 MS.gene22580:CDS 30.0%
! GATTATGTTCCTTATTTGTG+TGG - chr5.2:4052427-4052446 MS.gene22580:CDS 30.0%
! TCAGCAACATTGTTATTCAA+AGG - chr5.2:4051989-4052008 MS.gene22580:intron 30.0%
!! CCATGGAAATGTTTTTCAAA+TGG + chr5.2:4051191-4051210 None:intergenic 30.0%
!! CTTCTGTTTTCCTTTATTTG+TGG + chr5.2:4052736-4052755 None:intergenic 30.0%
!! GTTGTTTACTTTTCTTCAAG+AGG - chr5.2:4052043-4052062 MS.gene22580:intron 30.0%
!! TCAGTGAATGTTATTTCACT+TGG + chr5.2:4052676-4052695 None:intergenic 30.0%
!!! AGTGTTTTTGGTAATGCTAA+AGG - chr5.2:4051257-4051276 MS.gene22580:CDS 30.0%
!!! CATGATTGCTGATTTTATAG+CGG + chr5.2:4052263-4052282 None:intergenic 30.0%
!!! TCAATGTTTTTTAAGGATCC+TGG + chr5.2:4051749-4051768 None:intergenic 30.0%
AAAAGCCTTTGATCCAGTAT+AGG + chr5.2:4052319-4052338 None:intergenic 35.0%
AAAGCCTTTGATCCAGTATA+GGG + chr5.2:4052318-4052337 None:intergenic 35.0%
AACTTCTTGTCCTTTCACAA+TGG + chr5.2:4051819-4051838 None:intergenic 35.0%
AAGTTCTATCTTAGCTGCAA+TGG - chr5.2:4051355-4051374 MS.gene22580:CDS 35.0%
AGAACCTAAACCAAGTGAAA+GGG + chr5.2:4051414-4051433 None:intergenic 35.0%
ATAATTGGAGTCATAGACAC+AGG - chr5.2:4051014-4051033 MS.gene22580:CDS 35.0%
ATCTTTCTCTTGAAGAGACA+TGG + chr5.2:4050874-4050893 None:intergenic 35.0%
ATTCACTGAGGTAAATGAGA+AGG - chr5.2:4052687-4052706 MS.gene22580:CDS 35.0%
ATTCCTTCATCGTTGAATGA+TGG + chr5.2:4051056-4051075 None:intergenic 35.0%
CCTTCTTTCTCTATTCTGTT+GGG - chr5.2:4052544-4052563 MS.gene22580:CDS 35.0%
CTTCTTTCTCTATTCTGTTG+GGG - chr5.2:4052545-4052564 MS.gene22580:CDS 35.0%
CTTGCAAATTCAGAAACACT+TGG - chr5.2:4051866-4051885 MS.gene22580:intron 35.0%
TAACCCAAACCACACAAATA+AGG + chr5.2:4052439-4052458 None:intergenic 35.0%
TACATTGCTATGTGAGCATT+AGG + chr5.2:4051302-4051321 None:intergenic 35.0%
TCCACAAAAATTTCCTCACA+AGG - chr5.2:4050782-4050801 MS.gene22580:CDS 35.0%
TCCTTCTTTCTCTATTCTGT+TGG - chr5.2:4052543-4052562 MS.gene22580:CDS 35.0%
TGTCTGATAAACATGCTGTT+AGG - chr5.2:4052791-4052810 MS.gene22580:CDS 35.0%
TTCAGCGCATTGAATGTTAT+CGG + chr5.2:4051336-4051355 None:intergenic 35.0%
TTGTGGAATGATGATAACCT+TGG - chr5.2:4050981-4051000 MS.gene22580:CDS 35.0%
TTTGAAGACCCAATTGCAAT+TGG - chr5.2:4051443-4051462 MS.gene22580:CDS 35.0%
! AGTTGAACTTGAAGTACCTT+TGG - chr5.2:4052630-4052649 MS.gene22580:CDS 35.0%
! ATGTCTGGTTTAAGAATTCC+CGG + chr5.2:4052085-4052104 None:intergenic 35.0%
! CAAGTGTTTCTGAATTTGCA+AGG + chr5.2:4051868-4051887 None:intergenic 35.0%
! CAATTATGACACCTTTTCCA+AGG + chr5.2:4051001-4051020 None:intergenic 35.0%
! CCAGCTTTTAACATTGTTTC+CGG - chr5.2:4052163-4052182 MS.gene22580:intron 35.0%
! GTAGAAGATGCAAGTGTTTT+TGG - chr5.2:4051245-4051264 MS.gene22580:CDS 35.0%
! GTTCCTTATTTGTGTGGTTT+GGG - chr5.2:4052433-4052452 MS.gene22580:CDS 35.0%
! TCCTTGTGAGGAAATTTTTG+TGG + chr5.2:4050786-4050805 None:intergenic 35.0%
! TGTTCCTTATTTGTGTGGTT+TGG - chr5.2:4052432-4052451 MS.gene22580:CDS 35.0%
! TTATTGCCACTTGTATATGC+AGG - chr5.2:4051677-4051696 MS.gene22580:intron 35.0%
! TTTTGTTAGCAAGACCTGAA+AGG - chr5.2:4050898-4050917 MS.gene22580:CDS 35.0%
!! CAAAAGCACCAATTGCAATT+GGG + chr5.2:4051454-4051473 None:intergenic 35.0%
!! CAAGAAGTTCTAAATTCAGG+CGG - chr5.2:4051830-4051849 MS.gene22580:intron 35.0%
!! CGTTGAATGATGGATGATAA+GGG + chr5.2:4051046-4051065 None:intergenic 35.0%
!! CTTGGAAAAGGTGTCATAAT+TGG - chr5.2:4050999-4051018 MS.gene22580:CDS 35.0%
!! GGACAAGAAGTTCTAAATTC+AGG - chr5.2:4051827-4051846 MS.gene22580:intron 35.0%
!! TCGTTGAATGATGGATGATA+AGG + chr5.2:4051047-4051066 None:intergenic 35.0%
!! TGTAATGAAAGTGTCCTTTC+AGG + chr5.2:4050915-4050934 None:intergenic 35.0%
!! TGTTTTTCAAATGGAAGCTC+TGG + chr5.2:4051182-4051201 None:intergenic 35.0%
AAAACCATTCTGTCCTTGTG+AGG + chr5.2:4050798-4050817 None:intergenic 40.0%
AAAGTAGTGGTGTGTGATGT+TGG - chr5.2:4051779-4051798 MS.gene22580:intron 40.0%
AACTCACAGTCCAACTTTCT+TGG - chr5.2:4050938-4050957 MS.gene22580:CDS 40.0%
AAGGAATCAAACTTTCGCTC+AGG - chr5.2:4052753-4052772 MS.gene22580:CDS 40.0%
AATCAGTCTTTGTGTCTTCC+AGG - chr5.2:4051728-4051747 MS.gene22580:intron 40.0%
AATGAGCCTGCATATACAAG+TGG + chr5.2:4051686-4051705 None:intergenic 40.0%
ACCAGAACCTTGACTAATGT+TGG - chr5.2:4052586-4052605 MS.gene22580:CDS 40.0%
ACTCACAGTCCAACTTTCTT+GGG - chr5.2:4050939-4050958 MS.gene22580:CDS 40.0%
ACTGCAAATACTCTCAACCT+CGG - chr5.2:4052286-4052305 MS.gene22580:CDS 40.0%
AGGAATCAAACTTTCGCTCA+GGG - chr5.2:4052754-4052773 MS.gene22580:CDS 40.0%
AGGACAAGACATTGAAGTAC+CGG + chr5.2:4052185-4052204 None:intergenic 40.0%
ATTGTAGCATCAGCAAAGCT+AGG - chr5.2:4051596-4051615 MS.gene22580:CDS 40.0%
ATTTCCTCACAAGGACAGAA+TGG - chr5.2:4050791-4050810 MS.gene22580:CDS 40.0%
CATCCATCATTCAACGATGA+AGG - chr5.2:4051050-4051069 MS.gene22580:CDS 40.0%
CCAGAACCTTGACTAATGTT+GGG - chr5.2:4052587-4052606 MS.gene22580:CDS 40.0%
CCCAACAGAATAGAGAAAGA+AGG + chr5.2:4052547-4052566 None:intergenic 40.0%
CCGGAAACAATGTTAAAAGC+TGG + chr5.2:4052166-4052185 None:intergenic 40.0%
CCTGTTAAAGCAAATGATCC+CGG - chr5.2:4052379-4052398 MS.gene22580:CDS 40.0%
CGTGTTTCAACCATTGTGAA+AGG - chr5.2:4051806-4051825 MS.gene22580:intron 40.0%
CTATCCCTTTCACTTGGTTT+AGG - chr5.2:4051407-4051426 MS.gene22580:CDS 40.0%
CTTGTATATGCAGGCTCATT+TGG - chr5.2:4051686-4051705 MS.gene22580:intron 40.0%
GAGAACCTAAACCAAGTGAA+AGG + chr5.2:4051415-4051434 None:intergenic 40.0%
GATGTTCTATCCCTTTCACT+TGG - chr5.2:4051401-4051420 MS.gene22580:CDS 40.0%
GCAATTGGGTCTTCAAAGAA+TGG + chr5.2:4051440-4051459 None:intergenic 40.0%
GGATAATTCAGTTGAGCTTC+TGG + chr5.2:4052526-4052545 None:intergenic 40.0%
GTTCAGAAAAGTCTTTCGGT+TGG + chr5.2:4051655-4051674 None:intergenic 40.0%
TAAGAATTCCCGGACTTTCT+TGG + chr5.2:4052075-4052094 None:intergenic 40.0%
TATGCAGGCTCATTTGGATT+TGG - chr5.2:4051692-4051711 MS.gene22580:intron 40.0%
TCAAAAGTTCTCACCCTGAT+TGG - chr5.2:4052230-4052249 MS.gene22580:CDS 40.0%
TCAATGCAGCAATACCACTT+AGG + chr5.2:4052210-4052229 None:intergenic 40.0%
TGATCTGAGTGGAAAAGTAG+TGG - chr5.2:4051766-4051785 MS.gene22580:intron 40.0%
TGCAAACCCAACATTAGTCA+AGG + chr5.2:4052596-4052615 None:intergenic 40.0%
! ACAAAGACTGATTCTGTGTC+TGG + chr5.2:4051721-4051740 None:intergenic 40.0%
! ACTTGAAGTACCTTTGGCTT+TGG - chr5.2:4052636-4052655 MS.gene22580:CDS 40.0%
! GCTTTTGCTGCTACTCAAAA+TGG - chr5.2:4051467-4051486 MS.gene22580:CDS 40.0%
! TACATCAGTATTTGCTGCAG+AGG - chr5.2:4050647-4050666 MS.gene22580:CDS 40.0%
! TGTCAACATTCTAGCTGCAT+GGG - chr5.2:4052117-4052136 MS.gene22580:intron 40.0%
!! CAATGTTGCTGATGGATTGT+AGG + chr5.2:4051981-4052000 None:intergenic 40.0%
!! CTTGAAGTACCTTTGGCTTT+GGG - chr5.2:4052637-4052656 MS.gene22580:CDS 40.0%
!! GCAAAAGCACCAATTGCAAT+TGG + chr5.2:4051455-4051474 None:intergenic 40.0%
!!! ATTGCTGATTTTATAGCGGC+TGG + chr5.2:4052259-4052278 None:intergenic 40.0%
AAACCAGACATCATTGGTCC+AGG - chr5.2:4052094-4052113 MS.gene22580:intron 45.0%
AAAGGCCATTGCGAATTCAC+TGG - chr5.2:4051098-4051117 MS.gene22580:CDS 45.0%
AAGGATCCAAGGAGCTTCAT+TGG + chr5.2:4051546-4051565 None:intergenic 45.0%
ACACTCATACCCAAAGCCAA+AGG + chr5.2:4052649-4052668 None:intergenic 45.0%
AGGATTAACATGTCCTGCAC+CGG + chr5.2:4052362-4052381 None:intergenic 45.0%
ATGTCTTGTCCTCACCTAAG+TGG - chr5.2:4052193-4052212 MS.gene22580:CDS 45.0%
CCCAACATTAGTCAAGGTTC+TGG + chr5.2:4052590-4052609 None:intergenic 45.0%
CCGGGATCATTTGCTTTAAC+AGG + chr5.2:4052382-4052401 None:intergenic 45.0%
GCATCAGCAAAGCTAGGAAA+TGG - chr5.2:4051602-4051621 MS.gene22580:CDS 45.0%
GGATCCCTATACTGGATCAA+AGG - chr5.2:4052311-4052330 MS.gene22580:CDS 45.0%
GTTCAAGTGAGTTACACTGC+TGG - chr5.2:4051926-4051945 MS.gene22580:intron 45.0%
TGACAGCTGCATAGTGTAGT+TGG + chr5.2:4050583-4050602 None:intergenic 45.0%
TGCTTCAGACCCAAGAAAGT+TGG + chr5.2:4050951-4050970 None:intergenic 45.0%
TGGTTTCAGCACTTCTGCTA+CGG - chr5.2:4051886-4051905 MS.gene22580:intron 45.0%
! AATGCTAAAGGTGTAGCAGC+CGG - chr5.2:4051269-4051288 MS.gene22580:CDS 45.0%
! ACTGGATCAAAGGCTTTTGC+CGG - chr5.2:4052321-4052340 MS.gene22580:CDS 45.0%
! ACTTTCTTGGGTCTGAAGCA+AGG - chr5.2:4050951-4050970 MS.gene22580:CDS 45.0%
! AGTAAACAACAGAAGGTGCG+AGG + chr5.2:4052033-4052052 None:intergenic 45.0%
! ATCAATTGTGCTGGCACCAA+CGG + chr5.2:4051570-4051589 None:intergenic 45.0%
! CAATGGCCTTTCCATTTTGC+AGG + chr5.2:4051089-4051108 None:intergenic 45.0%
! CTTTCTTGGGTCTGAAGCAA+GGG - chr5.2:4050952-4050971 MS.gene22580:CDS 45.0%
! GTAAACAACAGAAGGTGCGA+GGG + chr5.2:4052032-4052051 None:intergenic 45.0%
! GTCAACATTCTAGCTGCATG+GGG - chr5.2:4052118-4052137 MS.gene22580:intron 45.0%
! GTGTCAACATTCTAGCTGCA+TGG - chr5.2:4052116-4052135 MS.gene22580:intron 45.0%
! TACGGCTCATGTTTTACCTG+CGG - chr5.2:4051904-4051923 MS.gene22580:intron 45.0%
ACACCTGGACCAATGATGTC+TGG + chr5.2:4052100-4052119 None:intergenic 50.0%
AGGACCAAGCCAAGAAAGTC+CGG - chr5.2:4052063-4052082 MS.gene22580:intron 50.0%
AGTGAAGCTGACACCAGAAG+AGG - chr5.2:4050848-4050867 MS.gene22580:CDS 50.0%
AGTTGCTCTGCTGCAAACTC+TGG - chr5.2:4051500-4051519 MS.gene22580:CDS 50.0%
ATTCCCGGACTTTCTTGGCT+TGG + chr5.2:4052070-4052089 None:intergenic 50.0%
CAAATACTCTCAACCTCGGC+GGG - chr5.2:4052290-4052309 MS.gene22580:CDS 50.0%
CAAATCCAGAGGCTACATGG+CGG + chr5.2:4050827-4050846 None:intergenic 50.0%
CAGCTTCACTGCAAATCCAG+AGG + chr5.2:4050838-4050857 None:intergenic 50.0%
CCACCACCTGCAAAATGGAA+AGG - chr5.2:4051080-4051099 MS.gene22580:CDS 50.0%
CCGGTAGCGAAAATATCAGC+CGG + chr5.2:4052343-4052362 None:intergenic 50.0%
CTCTCTCCAATGAAGCTCCT+TGG - chr5.2:4051537-4051556 MS.gene22580:CDS 50.0%
CTGCAAATCCAGAGGCTACA+TGG + chr5.2:4050830-4050849 None:intergenic 50.0%
GCAAATACTCTCAACCTCGG+CGG - chr5.2:4052289-4052308 MS.gene22580:CDS 50.0%
GCAGCAATACCACTTAGGTG+AGG + chr5.2:4052205-4052224 None:intergenic 50.0%
GCAGCTAGAATGTTGACACC+TGG + chr5.2:4052115-4052134 None:intergenic 50.0%
GCCATTGCGAATTCACTGGA+GGG - chr5.2:4051102-4051121 MS.gene22580:CDS 50.0%
GTAGTGGTGTGTGATGTTGG+AGG - chr5.2:4051782-4051801 MS.gene22580:intron 50.0%
GTGTAACTCACTTGAACCGC+AGG + chr5.2:4051923-4051942 None:intergenic 50.0%
TCCCTCCAGTGAATTCGCAA+TGG + chr5.2:4051106-4051125 None:intergenic 50.0%
TGAAGAGACATGGCCTCTTC+TGG + chr5.2:4050864-4050883 None:intergenic 50.0%
! CCGGCTGATATTTTCGCTAC+CGG - chr5.2:4052340-4052359 MS.gene22580:CDS 50.0%
! CCTTTCCATTTTGCAGGTGG+TGG + chr5.2:4051083-4051102 None:intergenic 50.0%
! GATATTTTCGCTACCGGTGC+AGG - chr5.2:4052346-4052365 MS.gene22580:CDS 50.0%
! GTGAGCATTAGGTGCCATAC+CGG + chr5.2:4051291-4051310 None:intergenic 50.0%
! TAAAGGTGTAGCAGCCGGTA+TGG - chr5.2:4051274-4051293 MS.gene22580:CDS 50.0%
! TGGCCTTTCCATTTTGCAGG+TGG + chr5.2:4051086-4051105 None:intergenic 50.0%
!! TTCCATTTTGCAGGTGGTGG+CGG + chr5.2:4051080-4051099 None:intergenic 50.0%
!! TTGGAGAGAGTGCTGTATCC+AGG + chr5.2:4051527-4051546 None:intergenic 50.0%
CAGCAGCAGTGTGTGTTCCA+TGG + chr5.2:4051208-4051227 None:intergenic 55.0%
CGCTCAGGGTTCTCTCACTT+GGG - chr5.2:4052768-4052787 MS.gene22580:CDS 55.0%
GCACCAACGGTAAGGATCCA+AGG + chr5.2:4051557-4051576 None:intergenic 55.0%
GCTCCTTGGATCCTTACCGT+TGG - chr5.2:4051551-4051570 MS.gene22580:CDS 55.0%
GGACCAAGCCAAGAAAGTCC+GGG - chr5.2:4052064-4052083 MS.gene22580:intron 55.0%
GGCCATTGCGAATTCACTGG+AGG - chr5.2:4051101-4051120 MS.gene22580:CDS 55.0%
TCGCTCAGGGTTCTCTCACT+TGG - chr5.2:4052767-4052786 MS.gene22580:CDS 55.0%
TCTGCTGCAAACTCTGGTCC+TGG - chr5.2:4051506-4051525 MS.gene22580:CDS 55.0%
TCTTACCGCCATGTAGCCTC+TGG - chr5.2:4050819-4050838 MS.gene22580:CDS 55.0%
TGAAGCAAGGGCAAGGGTTG+TGG - chr5.2:4050964-4050983 MS.gene22580:CDS 55.0%
TGGAACACACACTGCTGCTG+AGG - chr5.2:4051208-4051227 MS.gene22580:CDS 55.0%
! TGGGTCTGAAGCAAGGGCAA+GGG - chr5.2:4050958-4050977 MS.gene22580:CDS 55.0%
! TTGGGTCTGAAGCAAGGGCA+AGG - chr5.2:4050957-4050976 MS.gene22580:CDS 55.0%
! TTGTGCTGGCACCAACGGTA+AGG + chr5.2:4051565-4051584 None:intergenic 55.0%
ATAGCGGCTGGCGACCAATC+AGG + chr5.2:4052247-4052266 None:intergenic 60.0%
TAGCGGCTGGCGACCAATCA+GGG + chr5.2:4052246-4052265 None:intergenic 60.0%
TGCCGCCACCACCTGCAAAA+TGG - chr5.2:4051075-4051094 MS.gene22580:CDS 60.0%
CACACTGCTGCTGAGGCTGC+AGG - chr5.2:4051215-4051234 MS.gene22580:CDS 65.0%
CCAGTATAGGGATCCCGCCG+AGG + chr5.2:4052306-4052325 None:intergenic 65.0%
CCTCGGCGGGATCCCTATAC+TGG - chr5.2:4052303-4052322 MS.gene22580:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 4050570 4052840 4050570 ID=MS.gene22580
chr5.2 mRNA 4050570 4052840 4050570 ID=MS.gene22580.t1;Parent=MS.gene22580
chr5.2 exon 4052166 4052840 4052166 ID=MS.gene22580.t1.exon1;Parent=MS.gene22580.t1
chr5.2 CDS 4052166 4052840 4052166 ID=cds.MS.gene22580.t1;Parent=MS.gene22580.t1
chr5.2 exon 4050570 4051682 4050570 ID=MS.gene22580.t1.exon2;Parent=MS.gene22580.t1
chr5.2 CDS 4050570 4051682 4050570 ID=cds.MS.gene22580.t1;Parent=MS.gene22580.t1
Gene Sequence

>MS.gene22580

ATGATGAAAACCAACTACACTATGCAGCTGTCATTGCTTGTTACTCTCATTTTCATTCTCTGCAGCTTCAACCAAATTACATCAGTATTTGCTGCAGAGGAGAATCAAGAGCATAATCACAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATTTTGCTTCCTTTCAATCAGAAGATTTGCATAGTTGGTACCATTCATTTCTTCCACAAAAATTTCCTCACAAGGACAGAATGGTTTTCTCTTACCGCCATGTAGCCTCTGGATTTGCAGTGAAGCTGACACCAGAAGAGGCCATGTCTCTTCAAGAGAAAGATGAAATTTTGTTAGCAAGACCTGAAAGGACACTTTCATTACACACAACTCACAGTCCAACTTTCTTGGGTCTGAAGCAAGGGCAAGGGTTGTGGAATGATGATAACCTTGGAAAAGGTGTCATAATTGGAGTCATAGACACAGGAATATACCCTTATCATCCATCATTCAACGATGAAGGAATGCCGCCACCACCTGCAAAATGGAAAGGCCATTGCGAATTCACTGGAGGGAAAATATGCAATAATAAGCTCATCGGTGCAAGAAGTTTAGTCAAAAGCACGATTCCAGAGCTTCCATTTGAAAAACATTTCCATGGAACACACACTGCTGCTGAGGCTGCAGGAAGATTCGTAGAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCCGGTATGGCACCTAATGCTCACATAGCAATGTACAAAGTTTGTACCGATAACATTCAATGCGCTGAAAGTTCTATCTTAGCTGCAATGGATATTGCTATTGAAGATGGTGTAGATGTTCTATCCCTTTCACTTGGTTTAGGTTCTCTTCCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCTACTCAAAATGGTGTTTTTGTTAGTTGCTCTGCTGCAAACTCTGGTCCTGGATACAGCACTCTCTCCAATGAAGCTCCTTGGATCCTTACCGTTGGTGCCAGCACAATTGATAGAAAAATTGTAGCATCAGCAAAGCTAGGAAATGGAAATGAATATGAAGGTGAAACATTATTCCAACCGAAAGACTTTTCTGAACAATTATTGCCACTTGTATATGCAGGCTCATTTGGATTTGGAAACCAGACACAGAATCAGTCTTTGTGTCTTCCAGGATCCTTAAAAAACATTGATCTGAGTGGAAAAGTAGTGGTGTGTGATGTTGGAGGACGTGTTTCAACCATTGTGAAAGGACAAGAAGTTCTAAATTCAGGCGGTGTTGCTATGATCCTTGCAAATTCAGAAACACTTGGTTTCAGCACTTCTGCTACGGCTCATGTTTTACCTGCGGTTCAAGTGAGTTACACTGCTGGTTTAACAATCAAAGATTACATTAACTCAACCTACAATCCATCAGCAACATTGTTATTCAAAGGAACAGTAATTGGTGATTCCCTCGCACCTTCTGTTGTTTACTTTTCTTCAAGAGGACCAAGCCAAGAAAGTCCGGGAATTCTTAAACCAGACATCATTGGTCCAGGTGTCAACATTCTAGCTGCATGGGGTGTTTCTGTAGACAACAAAATTCCAGCTTTTAACATTGTTTCCGGTACTTCAATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAGTTCTCACCCTGATTGGTCGCCAGCCGCTATAAAATCAGCAATCATGACAACTGCAAATACTCTCAACCTCGGCGGGATCCCTATACTGGATCAAAGGCTTTTGCCGGCTGATATTTTCGCTACCGGTGCAGGACATGTTAATCCTGTTAAAGCAAATGATCCCGGTCTTGTTTATGATATTCAACCTGAAGATTATGTTCCTTATTTGTGTGGTTTGGGTTATTCTGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGTTCTAATGTGAAAAGTATACCAGAAGCTCAACTGAATTATCCTTCTTTCTCTATTCTGTTGGGGTCAGATTCACAGTATTATACCAGAACCTTGACTAATGTTGGGTTTGCAAATTCAACATATAGAGTTGAACTTGAAGTACCTTTGGCTTTGGGTATGAGTGTTAATCCAAGTGAAATAACATTCACTGAGGTAAATGAGAAGGTTAGTTTCTCTGTTGAATTTATACCACAAATAAAGGAAAACAGAAGGAATCAAACTTTCGCTCAGGGTTCTCTCACTTGGGTGTCTGATAAACATGCTGTTAGGATACCAATATCTGTCATTTTTAAGTGA

Protein sequence

>MS.gene22580.t1

MMKTNYTMQLSLLVTLIFILCSFNQITSVFAAEENQEHNHNLMTYIVHVKKSENFASFQSEDLHSWYHSFLPQKFPHKDRMVFSYRHVASGFAVKLTPEEAMSLQEKDEILLARPERTLSLHTTHSPTFLGLKQGQGLWNDDNLGKGVIIGVIDTGIYPYHPSFNDEGMPPPPAKWKGHCEFTGGKICNNKLIGARSLVKSTIPELPFEKHFHGTHTAAEAAGRFNQSLCLPGSLKNIDLSGKVVVCDVGGRVSTIVKGQEVLNSGGVAMILANSETLGFSTSATAHVLPAVQVSYTAGLTIKDYINSTYNPSATLLFKGTVIGDSLAPSVVYFSSRGPSQESPGILKPDIIGPGVNILAAWGVSVDNKIPAFNIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGIPILDQRLLPADIFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLGYSDKEIEVIVQWKVKCSNVKSIPEAQLNYPSFSILLGSDSQYYTRTLTNVGFANSTYRVELEVPLALGMSVNPSEITFTEVNEKVSFSVEFIPQIKENRRNQTFAQGSLTWVSDKHAVRIPISVIFK