AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26257

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26257.t1 MTR_5g075440 91.485 458 39 0 1 458 1 458 0.0 873
MS.gene26257.t1 MTR_5g072860 59.031 454 176 5 10 457 18 467 0.0 550
MS.gene26257.t1 MTR_5g072850 59.211 456 112 9 1 456 1 382 4.50e-176 498
MS.gene26257.t1 MTR_3g031400 52.980 453 193 7 7 456 15 450 2.50e-161 464
MS.gene26257.t1 MTR_3g031450 52.620 458 197 7 4 457 12 453 6.04e-160 461
MS.gene26257.t1 MTR_5g072810 48.796 457 214 8 7 455 9 453 1.43e-148 431
MS.gene26257.t1 MTR_5g072820 48.140 457 212 9 8 455 8 448 4.04e-141 412
MS.gene26257.t1 MTR_5g072840 47.461 453 221 8 8 455 8 448 7.76e-141 411
MS.gene26257.t1 MTR_5g072830 48.026 456 214 9 8 455 8 448 2.54e-140 410
MS.gene26257.t1 MTR_3g008010 29.713 488 283 16 10 456 10 478 9.81e-62 208
MS.gene26257.t1 MTR_6g014290 30.533 488 279 17 10 456 10 478 1.30e-61 208
MS.gene26257.t1 MTR_6g013990 32.311 489 269 17 10 456 10 478 4.40e-61 206
MS.gene26257.t1 MTR_6g014250 29.939 491 278 17 10 456 10 478 1.18e-60 206
MS.gene26257.t1 MTR_8g083290 30.126 478 284 12 11 456 5 464 3.66e-60 204
MS.gene26257.t1 MTR_7g080950 29.935 461 295 14 10 458 6 450 1.87e-58 199
MS.gene26257.t1 MTR_5g464810 30.913 482 289 16 7 456 9 478 6.75e-58 198
MS.gene26257.t1 MTR_5g064240 30.913 482 289 16 7 456 9 478 6.75e-58 198
MS.gene26257.t1 MTR_8g059425 30.123 488 281 16 10 456 10 478 1.11e-57 197
MS.gene26257.t1 MTR_6g014220 30.328 488 280 17 10 456 10 478 1.13e-57 197
MS.gene26257.t1 MTR_6g014170 30.595 487 264 17 10 456 10 462 6.51e-57 195
MS.gene26257.t1 MTR_6g014270 29.878 492 281 15 10 456 7 479 8.74e-57 195
MS.gene26257.t1 MTR_6g013960 30.675 489 279 17 10 456 10 480 1.22e-56 195
MS.gene26257.t1 MTR_6g014040 30.020 493 278 16 10 456 10 481 3.72e-56 194
MS.gene26257.t1 MTR_6g011340 29.979 487 285 14 10 456 10 480 9.50e-56 192
MS.gene26257.t1 MTR_6g013900 30.957 491 274 16 10 456 10 479 1.46e-55 192
MS.gene26257.t1 MTR_5g464760 30.372 484 289 17 10 458 12 482 4.21e-55 191
MS.gene26257.t1 MTR_3g079480 29.774 487 286 14 10 457 21 490 4.34e-55 191
MS.gene26257.t1 MTR_6g014310 29.065 492 283 19 10 456 11 481 1.08e-54 190
MS.gene26257.t1 MTR_7g080940 27.706 462 304 13 10 458 11 455 1.45e-54 189
MS.gene26257.t1 MTR_6g014200 30.285 492 277 17 10 456 7 477 1.82e-54 189
MS.gene26257.t1 MTR_6g038200 28.294 463 296 14 8 453 9 452 2.11e-54 188
MS.gene26257.t1 MTR_8g088560 28.986 483 289 13 1 455 1 457 2.23e-54 188
MS.gene26257.t1 MTR_0288s0020 29.630 486 269 14 10 456 10 461 6.39e-54 187
MS.gene26257.t1 MTR_7g080935 28.326 466 304 13 6 458 7 455 1.06e-53 187
MS.gene26257.t1 MTR_6g013450 30.816 490 278 19 10 456 10 481 1.13e-53 187
MS.gene26257.t1 MTR_6g038220 28.261 460 295 15 10 453 11 451 1.78e-53 186
MS.gene26257.t1 MTR_8g083280 27.430 463 311 9 11 456 8 462 2.01e-53 186
MS.gene26257.t1 MTR_6g013920 31.070 486 280 16 10 456 10 479 2.13e-53 186
MS.gene26257.t1 MTR_5g058320 31.546 485 265 21 10 456 10 465 2.69e-53 186
MS.gene26257.t1 MTR_2g008210 28.302 477 302 15 10 456 11 477 2.86e-53 186
MS.gene26257.t1 MTR_4g094920 29.959 484 283 16 4 456 22 480 3.96e-53 186
MS.gene26257.t1 MTR_6g038300 29.374 463 292 15 10 455 11 455 1.04e-52 184
MS.gene26257.t1 MTR_6g013440 29.412 493 280 20 10 456 11 481 3.26e-52 183
MS.gene26257.t1 MTR_6g014050 28.131 487 294 14 10 456 11 481 1.41e-51 181
MS.gene26257.t1 MTR_4g095008 29.025 472 289 14 11 456 14 465 2.22e-51 182
MS.gene26257.t1 MTR_6g038230 27.391 460 304 14 8 453 9 452 2.93e-51 180
MS.gene26257.t1 MTR_6g038240 27.983 461 302 12 10 456 11 455 3.31e-51 180
MS.gene26257.t1 MTR_3g479520 28.838 482 297 16 10 457 15 484 4.05e-51 180
MS.gene26257.t1 MTR_3g084520 27.572 486 293 16 10 455 6 472 4.97e-51 180
MS.gene26257.t1 MTR_3g084540 28.337 487 289 19 10 455 6 473 5.80e-51 179
MS.gene26257.t1 MTR_0036s0220 29.289 478 296 17 10 456 12 478 8.96e-51 179
MS.gene26257.t1 MTR_6g014020 29.006 493 282 17 10 456 10 480 9.68e-51 179
MS.gene26257.t1 MTR_3g479490 28.333 480 300 14 10 456 6 474 1.05e-50 179
MS.gene26257.t1 MTR_6g014150 29.675 492 280 17 10 456 7 477 1.57e-50 179
MS.gene26257.t1 MTR_6g014187 28.484 488 291 13 10 456 10 480 2.01e-50 178
MS.gene26257.t1 MTR_7g011470 28.898 481 284 17 10 456 10 466 8.58e-50 176
MS.gene26257.t1 MTR_5g035560 28.755 466 291 16 10 457 11 453 8.81e-50 177
MS.gene26257.t1 MTR_5g035580 29.284 461 285 16 10 452 13 450 1.04e-49 176
MS.gene26257.t1 MTR_6g014300 27.766 479 290 16 10 456 12 466 2.17e-49 175
MS.gene26257.t1 MTR_3g084530 27.959 490 286 17 10 455 6 472 3.63e-49 174
MS.gene26257.t1 MTR_5g016480 28.875 471 286 15 19 456 17 471 4.47e-49 174
MS.gene26257.t1 MTR_1g107380 28.571 476 296 16 10 456 13 473 7.92e-49 174
MS.gene26257.t1 MTR_3g049970 28.571 476 295 15 10 455 9 469 8.53e-49 174
MS.gene26257.t1 MTR_3g479470 28.953 487 289 18 10 457 13 481 1.77e-48 173
MS.gene26257.t1 MTR_7g011470 28.750 480 282 17 10 456 10 462 2.78e-48 172
MS.gene26257.t1 MTR_7g080900 27.778 468 306 17 6 458 8 458 6.26e-48 171
MS.gene26257.t1 MTR_3g069710 26.840 462 304 10 11 458 13 454 6.42e-46 166
MS.gene26257.t1 MTR_4g024020 27.711 498 295 16 10 458 9 490 6.70e-45 164
MS.gene26257.t1 MTR_6g014240 28.750 480 268 16 10 455 7 446 1.11e-44 162
MS.gene26257.t1 MTR_7g055710 28.175 504 290 19 1 454 1 482 1.23e-44 163
MS.gene26257.t1 MTR_7g013180 27.957 465 287 14 10 453 5 442 1.47e-44 162
MS.gene26257.t1 MTR_1g107315 28.750 480 293 16 10 457 8 470 1.70e-44 162
MS.gene26257.t1 MTR_4g094220 26.829 492 288 15 10 452 7 475 2.47e-44 162
MS.gene26257.t1 MTR_7g070660 28.373 504 293 19 1 458 1 482 3.60e-44 162
MS.gene26257.t1 MTR_7g102460 27.846 492 295 14 10 456 9 485 6.08e-44 161
MS.gene26257.t1 MTR_5g070090 27.824 478 286 18 10 455 11 461 2.10e-43 159
MS.gene26257.t1 MTR_7g070610 27.756 508 298 16 1 458 1 489 3.81e-43 159
MS.gene26257.t1 MTR_8g064870 28.330 473 290 14 16 455 17 473 3.82e-43 159
MS.gene26257.t1 MTR_1g107360 27.505 469 301 13 10 455 9 461 5.46e-43 158
MS.gene26257.t1 MTR_8g027885 29.661 472 272 17 8 444 15 461 5.50e-43 158
MS.gene26257.t1 MTR_7g071040 25.977 512 300 14 1 458 7 493 6.28e-43 158
MS.gene26257.t1 MTR_7g102490 27.515 487 305 15 10 456 9 487 6.38e-43 158
MS.gene26257.t1 MTR_1g107375 27.292 480 281 16 10 455 8 453 8.42e-43 157
MS.gene26257.t1 MTR_7g117405 25.963 493 298 14 10 457 12 482 1.54e-42 157
MS.gene26257.t1 MTR_8g077590 28.423 482 277 17 2 444 3 455 5.43e-42 155
MS.gene26257.t1 MTR_1g107365 27.651 481 279 16 10 455 45 491 6.93e-42 155
MS.gene26257.t1 MTR_5g090700 26.104 498 296 14 9 457 4 478 7.28e-42 155
MS.gene26257.t1 MTR_5g098930 26.489 487 297 15 10 457 5 469 1.42e-41 154
MS.gene26257.t1 MTR_8g027870 29.274 468 279 14 8 444 15 461 2.26e-41 154
MS.gene26257.t1 MTR_3g069690 24.089 494 289 14 6 458 4 452 4.83e-41 152
MS.gene26257.t1 MTR_1g107350 26.294 483 297 15 10 455 8 468 6.09e-41 152
MS.gene26257.t1 MTR_1g032490 26.899 487 307 14 1 455 1 470 6.90e-41 152
MS.gene26257.t1 MTR_1g062380 25.984 508 308 16 1 458 7 496 8.25e-41 152
MS.gene26257.t1 MTR_5g090630 26.543 486 288 14 9 452 4 462 1.12e-40 151
MS.gene26257.t1 MTR_1g029540 26.170 470 289 18 15 455 19 459 1.16e-40 151
MS.gene26257.t1 MTR_3g479610 30.769 312 185 7 165 457 15 314 1.96e-40 147
MS.gene26257.t1 MTR_5g045960 25.852 499 297 16 10 456 9 486 2.90e-40 151
MS.gene26257.t1 MTR_7g102560 27.054 499 308 13 1 457 1 485 3.19e-40 150
MS.gene26257.t1 MTR_8g043470 28.029 421 227 12 58 456 12 378 4.02e-40 148
MS.gene26257.t1 MTR_8g009050 26.981 467 292 14 10 444 6 455 4.80e-40 150
MS.gene26257.t1 MTR_8g066610 28.743 501 293 22 1 458 1 480 5.12e-40 150
MS.gene26257.t1 MTR_5g090660 24.949 489 309 12 9 457 4 474 5.87e-40 151
MS.gene26257.t1 MTR_5g045970 27.778 504 303 16 1 458 7 495 6.53e-40 150
MS.gene26257.t1 MTR_1g107285 27.426 474 296 15 11 455 9 463 7.32e-40 149
MS.gene26257.t1 MTR_4g008630 27.122 483 279 22 11 455 15 462 1.06e-39 149
MS.gene26257.t1 MTR_8g009063 27.312 465 293 12 10 444 13 462 1.07e-39 149
MS.gene26257.t1 MTR_7g070780 26.923 494 298 17 10 458 11 486 1.21e-39 149
MS.gene26257.t1 MTR_7g070800 26.518 494 311 15 1 458 1 478 1.69e-39 149
MS.gene26257.t1 MTR_5g031840 27.352 457 259 18 10 415 5 439 3.48e-39 147
MS.gene26257.t1 MTR_7g070940 25.050 499 309 14 1 458 1 475 4.26e-39 147
MS.gene26257.t1 MTR_1g019510 27.564 468 287 15 10 445 6 453 4.96e-39 147
MS.gene26257.t1 MTR_7g117170 27.731 476 275 14 11 444 16 464 1.40e-38 146
MS.gene26257.t1 MTR_5g031860 28.000 500 278 20 1 452 1 466 1.78e-38 145
MS.gene26257.t1 MTR_6g005600 27.004 474 284 16 10 444 6 456 5.62e-38 144
MS.gene26257.t1 MTR_7g070740 26.680 506 303 17 1 458 1 486 6.09e-38 144
MS.gene26257.t1 MTR_8g064880 27.309 498 279 15 10 455 9 475 6.18e-38 144
MS.gene26257.t1 MTR_8g009073 27.984 486 282 18 10 458 6 460 6.60e-38 144
MS.gene26257.t1 MTR_0184s0040 27.214 463 295 14 10 444 21 469 7.04e-38 144
MS.gene26257.t1 MTR_0078s0190 27.214 463 295 14 10 444 21 469 7.04e-38 144
MS.gene26257.t1 MTR_6g033725 28.134 359 225 9 110 451 115 457 9.21e-38 144
MS.gene26257.t1 MTR_4g031800 25.155 485 298 17 14 457 13 473 1.34e-37 143
MS.gene26257.t1 MTR_8g008970 27.682 466 288 14 10 444 6 453 1.37e-37 146
MS.gene26257.t1 MTR_8g008970 31.343 268 165 7 185 444 521 777 3.54e-27 115
MS.gene26257.t1 MTR_4g485620 30.155 388 236 13 92 458 84 457 1.41e-37 143
MS.gene26257.t1 MTR_8g008990 26.923 468 293 14 10 444 6 457 1.61e-37 143
MS.gene26257.t1 MTR_8g012650 30.263 380 224 10 106 458 109 474 1.64e-37 143
MS.gene26257.t1 MTR_4g485630 26.033 484 301 14 10 455 9 473 2.46e-37 142
MS.gene26257.t1 MTR_7g070910 24.900 502 318 14 1 458 1 487 2.75e-37 142
MS.gene26257.t1 MTR_5g090580 25.152 493 305 15 9 457 4 476 5.75e-37 141
MS.gene26257.t1 MTR_7g013200 26.609 466 293 16 10 456 5 440 7.14e-37 140
MS.gene26257.t1 MTR_7g013240 25.926 459 302 12 8 453 4 437 9.61e-37 140
MS.gene26257.t1 MTR_3g009510 27.917 480 280 17 11 444 6 465 1.20e-36 140
MS.gene26257.t1 MTR_7g013220 26.793 474 287 16 10 453 5 448 1.99e-36 139
MS.gene26257.t1 MTR_2g046750 25.314 478 294 15 17 455 12 465 2.42e-36 139
MS.gene26257.t1 MTR_0078s0060 28.266 467 290 17 10 446 6 457 4.48e-36 139
MS.gene26257.t1 MTR_7g070930 26.389 504 301 16 4 458 8 490 4.58e-36 139
MS.gene26257.t1 MTR_8g009055 26.483 472 288 16 10 444 6 455 6.07e-36 139
MS.gene26257.t1 MTR_7g070810 24.950 497 315 14 1 458 1 478 9.05e-36 138
MS.gene26257.t1 MTR_5g031830 26.733 505 279 20 1 452 1 467 9.30e-36 138
MS.gene26257.t1 MTR_4g064987 25.159 473 300 16 11 458 9 452 1.29e-35 137
MS.gene26257.t1 MTR_8g007585 36.275 204 109 4 263 456 200 392 1.32e-35 136
MS.gene26257.t1 MTR_7g070860 26.501 483 312 14 1 458 1 465 2.91e-35 137
MS.gene26257.t1 MTR_6g023665 25.793 473 300 15 11 451 14 467 3.45e-35 136
MS.gene26257.t1 MTR_6g033675 27.933 358 228 7 110 451 117 460 5.03e-35 136
MS.gene26257.t1 MTR_5g090620 25.103 486 305 14 9 452 4 472 7.18e-35 135
MS.gene26257.t1 MTR_4g108250 23.031 508 316 14 4 458 5 490 7.25e-35 136
MS.gene26257.t1 MTR_7g013260 25.161 465 299 13 8 453 4 438 7.53e-35 135
MS.gene26257.t1 MTR_0184s0030 24.895 474 294 16 10 444 6 456 8.53e-35 135
MS.gene26257.t1 MTR_0078s0010 26.383 470 296 17 10 446 6 458 8.90e-35 135
MS.gene26257.t1 MTR_8g009067 26.681 476 296 16 10 452 6 461 9.02e-35 135
MS.gene26257.t1 MTR_8g012745 26.477 491 294 16 10 458 6 471 9.05e-35 135
MS.gene26257.t1 MTR_0477s0010 28.412 359 193 10 118 456 3 317 1.19e-34 132
MS.gene26257.t1 MTR_7g047030 25.800 469 300 15 10 446 6 458 1.25e-34 135
MS.gene26257.t1 MTR_7g047270 25.800 469 300 15 10 446 6 458 1.25e-34 135
MS.gene26257.t1 MTR_8g012635 26.489 487 296 13 10 455 6 471 1.26e-34 135
MS.gene26257.t1 MTR_8g074550 25.403 496 287 14 9 445 7 478 1.33e-34 135
MS.gene26257.t1 MTR_8g466240 26.596 470 303 14 10 458 8 456 1.36e-34 134
MS.gene26257.t1 MTR_2g040530 24.842 475 299 13 17 455 12 464 1.96e-34 134
MS.gene26257.t1 MTR_8g006730 25.265 471 309 13 10 451 6 462 3.03e-34 134
MS.gene26257.t1 MTR_7g102450 24.211 475 321 12 10 457 11 473 3.28e-34 134
MS.gene26257.t1 MTR_6g013680 28.471 425 214 19 61 456 12 375 3.32e-34 132
MS.gene26257.t1 MTR_8g009067 30.921 304 177 9 171 452 51 343 3.44e-34 131
MS.gene26257.t1 MTR_5g090600 25.160 469 314 13 9 457 4 455 6.02e-34 133
MS.gene26257.t1 MTR_4g064987 25.370 473 293 17 11 458 9 446 7.91e-34 132
MS.gene26257.t1 MTR_7g102550 25.591 508 301 19 3 456 2 486 1.13e-33 132
MS.gene26257.t1 MTR_5g087620 25.299 502 307 17 10 458 10 496 1.43e-33 132
MS.gene26257.t1 MTR_6g033660 27.824 363 214 9 110 448 118 456 1.79e-33 132
MS.gene26257.t1 MTR_0891s0010 28.832 274 155 6 207 457 35 291 2.34e-33 127
MS.gene26257.t1 MTR_8g009073 29.683 347 196 13 137 458 8 331 2.43e-33 129
MS.gene26257.t1 MTR_5g090670 24.850 499 301 15 9 457 4 478 2.52e-33 131
MS.gene26257.t1 MTR_2g046820 29.643 280 166 7 201 455 189 462 2.64e-33 131
MS.gene26257.t1 MTR_8g006710 25.052 479 311 13 11 458 7 468 2.80e-33 131
MS.gene26257.t1 MTR_6g033625 28.177 362 221 11 110 451 118 460 3.09e-33 131
MS.gene26257.t1 MTR_6g014190 28.618 304 174 10 179 456 1 287 3.51e-33 127
MS.gene26257.t1 MTR_4g117950 24.638 483 299 17 14 458 10 465 4.71e-33 130
MS.gene26257.t1 MTR_4g118000 23.859 482 296 15 14 455 16 466 3.11e-32 128
MS.gene26257.t1 MTR_0536s0010 26.952 397 239 15 90 458 106 479 3.66e-32 128
MS.gene26257.t1 MTR_6g488280 24.406 463 305 14 11 444 7 453 4.80e-32 127
MS.gene26257.t1 MTR_0428s0010 24.406 463 305 14 11 444 7 453 4.80e-32 127
MS.gene26257.t1 MTR_4g485640 28.070 399 215 14 95 452 296 663 1.06e-31 128
MS.gene26257.t1 MTR_7g046490 31.475 305 175 8 171 453 169 461 1.07e-31 126
MS.gene26257.t1 MTR_0536s0020 24.793 484 296 18 14 455 22 479 1.52e-31 126
MS.gene26257.t1 MTR_8g465670 26.327 490 300 17 1 452 1 467 3.50e-31 125
MS.gene26257.t1 MTR_8g044140 26.914 431 259 15 62 455 37 448 4.62e-31 125
MS.gene26257.t1 MTR_7g102520 23.780 492 316 11 10 456 12 489 6.18e-31 125
MS.gene26257.t1 MTR_8g090095 24.846 487 283 16 15 455 30 479 6.60e-31 124
MS.gene26257.t1 MTR_5g090610 24.025 487 294 13 9 452 4 457 1.15e-30 124
MS.gene26257.t1 MTR_8g006260 26.902 368 222 10 110 449 115 463 1.16e-30 124
MS.gene26257.t1 MTR_6g014160 29.781 319 175 9 78 374 67 358 1.20e-30 122
MS.gene26257.t1 MTR_2g035040 28.975 283 174 7 202 458 108 389 1.54e-30 122
MS.gene26257.t1 MTR_6g033615 27.171 357 218 10 110 449 113 444 1.66e-30 123
MS.gene26257.t1 MTR_7g070870 24.335 489 299 14 2 458 12 461 2.30e-30 123
MS.gene26257.t1 MTR_2g059240 25.257 487 294 16 10 456 13 469 3.59e-30 122
MS.gene26257.t1 MTR_0009s0240 24.644 491 298 19 7 458 4 461 5.28e-30 122
MS.gene26257.t1 MTR_2g035020 28.873 284 167 7 202 455 203 481 6.96e-30 122
MS.gene26257.t1 MTR_5g016660 26.835 395 242 10 92 455 105 483 6.96e-30 122
MS.gene26257.t1 MTR_2g098430 23.984 492 304 15 11 453 7 477 9.48e-30 121
MS.gene26257.t1 MTR_4g117890 24.082 490 298 19 14 458 17 477 9.93e-30 121
MS.gene26257.t1 MTR_8g006270 27.624 362 217 11 110 444 109 452 1.04e-29 121
MS.gene26257.t1 MTR_2g034990 25.781 384 239 11 106 458 116 484 1.23e-29 121
MS.gene26257.t1 MTR_5g070040 26.105 475 301 15 9 453 10 464 1.32e-29 120
MS.gene26257.t1 MTR_6g035295 27.807 374 235 12 110 458 124 487 2.97e-29 120
MS.gene26257.t1 MTR_4g117980 25.000 488 305 15 14 458 15 484 6.17e-29 119
MS.gene26257.t1 MTR_4g117960 24.074 486 311 16 14 458 15 483 6.23e-29 119
MS.gene26257.t1 MTR_5g072825 52.577 97 43 1 1 97 1 94 1.37e-28 108
MS.gene26257.t1 MTR_6g014186 24.644 491 268 17 10 456 7 439 2.28e-28 117
MS.gene26257.t1 MTR_5g027210 24.948 477 278 15 14 431 8 463 4.00e-28 116
MS.gene26257.t1 MTR_6g035185 23.188 483 315 15 14 455 15 482 5.72e-28 116
MS.gene26257.t1 MTR_8g012730 34.975 203 103 6 265 443 99 296 6.89e-28 113
MS.gene26257.t1 MTR_5g039900 25.995 377 237 9 110 458 124 486 9.88e-28 115
MS.gene26257.t1 MTR_1g040310 26.064 376 237 8 107 455 122 483 1.25e-27 115
MS.gene26257.t1 MTR_8g012630 33.659 205 109 5 263 444 204 404 1.27e-27 114
MS.gene26257.t1 MTR_4g082810 29.900 301 181 12 108 386 110 402 1.38e-27 114
MS.gene26257.t1 MTR_8g032950 23.935 493 302 16 11 455 13 480 1.91e-27 114
MS.gene26257.t1 MTR_5g040030 26.440 382 231 11 110 458 126 490 3.01e-27 114
MS.gene26257.t1 MTR_1g019520 32.039 206 110 5 263 445 4 202 3.32e-27 108
MS.gene26257.t1 MTR_4g082820 29.963 267 161 8 205 452 201 460 3.77e-27 114
MS.gene26257.t1 MTR_8g071070 23.505 485 321 12 7 458 4 471 5.29e-27 113
MS.gene26257.t1 MTR_5g019580 23.529 493 316 14 10 458 7 482 7.66e-27 113
MS.gene26257.t1 MTR_8g006220 25.581 473 274 15 11 431 7 453 1.37e-26 112
MS.gene26257.t1 MTR_5g098960 25.172 437 285 14 11 418 8 431 1.42e-26 112
MS.gene26257.t1 MTR_7g080960 23.269 520 278 15 6 458 8 473 1.44e-26 112
MS.gene26257.t1 MTR_5g067170 22.424 495 307 15 14 458 15 482 2.88e-26 111
MS.gene26257.t1 MTR_7g012120 31.651 218 126 3 263 458 270 486 5.08e-26 110
MS.gene26257.t1 MTR_7g470610 33.005 203 111 5 212 394 76 273 5.14e-26 107
MS.gene26257.t1 MTR_7g070583 33.005 203 111 5 212 394 76 273 5.14e-26 107
MS.gene26257.t1 MTR_7g039550 27.341 267 167 6 215 458 2 264 5.86e-26 107
MS.gene26257.t1 MTR_5g019580 26.740 273 173 6 211 458 236 506 6.03e-26 110
MS.gene26257.t1 MTR_2086s0010 35.338 133 78 2 325 457 49 173 6.65e-26 103
MS.gene26257.t1 MTR_1996s0010 35.338 133 78 2 325 457 49 173 6.65e-26 103
MS.gene26257.t1 MTR_5g066390 37.879 132 74 2 325 456 92 215 7.70e-26 105
MS.gene26257.t1 MTR_6g078320 26.331 357 225 13 110 443 126 467 1.30e-25 109
MS.gene26257.t1 MTR_5g029800 22.177 487 310 16 14 455 15 477 2.80e-25 108
MS.gene26257.t1 MTR_6g014185 28.832 274 150 9 197 458 107 347 1.08e-24 105
MS.gene26257.t1 MTR_4g485590 26.225 408 239 15 10 390 9 381 1.74e-24 105
MS.gene26257.t1 MTR_7g067120 24.439 446 282 16 1 430 1 407 4.88e-24 104
MS.gene26257.t1 MTR_6g035265 26.056 284 182 6 202 458 194 476 1.89e-23 103
MS.gene26257.t1 MTR_7g070760 30.542 203 112 4 197 390 19 201 5.64e-23 97.1
MS.gene26257.t1 MTR_7g070995 32.857 140 86 2 326 458 9 147 1.44e-22 94.4
MS.gene26257.t1 MTR_7g071050 32.447 188 103 5 263 430 231 414 2.52e-22 99.4
MS.gene26257.t1 MTR_7g067330 23.462 439 279 17 1 422 1 399 1.25e-21 97.4
MS.gene26257.t1 MTR_1g107325 34.351 131 84 1 325 455 224 352 6.03e-21 94.4
MS.gene26257.t1 MTR_5g004940 30.198 202 111 5 263 455 197 377 9.21e-21 94.4
MS.gene26257.t1 MTR_4g128690 21.231 471 329 16 2 455 7 452 1.27e-20 94.4
MS.gene26257.t1 MTR_6g014000 34.646 127 75 2 325 451 33 151 1.39e-20 94.7
MS.gene26257.t1 MTR_3g009490 40.650 123 69 3 323 444 58 177 1.65e-20 89.4
MS.gene26257.t1 MTR_8g068330 23.060 451 310 15 10 436 8 445 1.80e-20 94.0
MS.gene26257.t1 MTR_4g123553 22.870 446 301 14 10 433 15 439 6.09e-20 92.4
MS.gene26257.t1 MTR_8g007650 22.037 481 316 16 10 454 7 464 6.27e-20 92.4
MS.gene26257.t1 MTR_8g068340 24.130 460 285 17 10 430 12 446 7.19e-20 92.4
MS.gene26257.t1 MTR_6g036650 23.146 445 308 11 10 433 18 449 7.62e-20 92.4
MS.gene26257.t1 MTR_8g009840 32.850 207 107 8 264 444 314 514 9.80e-20 92.0
MS.gene26257.t1 MTR_4g128720 20.339 472 319 15 10 455 15 455 1.98e-19 90.9
MS.gene26257.t1 MTR_8g007565 21.830 481 317 16 10 454 7 464 2.08e-19 90.9
MS.gene26257.t1 MTR_1g090270 22.078 462 295 15 10 436 15 446 6.52e-19 89.4
MS.gene26257.t1 MTR_8g068360 23.110 463 296 19 9 436 11 448 7.02e-19 89.4
MS.gene26257.t1 MTR_0536s0030 32.639 144 88 3 323 458 212 354 5.63e-18 85.5
MS.gene26257.t1 MTR_2g046620 26.957 230 156 6 211 433 216 440 1.17e-17 85.5
MS.gene26257.t1 MTR_4g079250 25.403 248 154 6 205 436 207 439 2.61e-17 84.3
MS.gene26257.t1 MTR_8g056740 27.074 229 134 7 211 412 114 336 3.50e-17 83.6
MS.gene26257.t1 MTR_5g066410 21.458 480 297 17 14 454 2 440 8.42e-17 82.8
MS.gene26257.t1 MTR_4g077960 26.482 253 166 7 211 456 192 431 2.02e-16 81.6
MS.gene26257.t1 MTR_4g059370 26.545 275 166 8 198 456 131 385 2.55e-16 80.9
MS.gene26257.t1 MTR_2g008225 25.764 229 160 4 211 433 220 444 2.90e-16 81.3
MS.gene26257.t1 MTR_4g079270 25.103 243 161 6 205 436 207 439 3.19e-16 81.3
MS.gene26257.t1 MTR_2g014900 23.358 411 254 15 59 436 55 437 4.71e-16 80.5
MS.gene26257.t1 MTR_2g008220 22.075 453 301 14 10 433 14 443 8.96e-16 79.7
MS.gene26257.t1 MTR_6g042310 26.496 234 152 7 211 433 218 442 9.03e-16 79.7
MS.gene26257.t1 MTR_2g083480 22.698 467 302 17 1 436 1 439 2.10e-14 75.5
MS.gene26257.t1 MTR_2g083390 24.342 456 286 21 1 437 1 416 2.39e-14 75.1
MS.gene26257.t1 MTR_2g008226 25.108 231 155 6 211 432 226 447 2.43e-14 75.5
MS.gene26257.t1 MTR_5g090690 28.512 242 123 8 235 454 166 379 9.11e-14 73.2
MS.gene26257.t1 MTR_3g435310 32.544 169 97 6 265 422 228 390 1.19e-12 69.7
MS.gene26257.t1 MTR_0475s0030 41.935 62 36 0 340 401 11 72 2.12e-12 63.5
MS.gene26257.t1 MTR_3g479620 29.012 162 101 5 10 159 6 165 3.45e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26257.t1 AT2G30150 47.712 459 232 4 1 458 4 455 1.83e-152 441
MS.gene26257.t1 AT2G30150 47.982 446 224 4 14 458 1 439 1.53e-148 431
MS.gene26257.t1 AT2G30140 46.288 458 235 6 2 457 5 453 1.32e-143 419
MS.gene26257.t1 AT2G30140 46.288 458 234 6 2 457 5 452 1.58e-143 418
MS.gene26257.t1 AT2G36970 27.366 486 306 11 1 455 1 470 3.63e-66 220
MS.gene26257.t1 AT1G05675 30.603 464 283 13 10 453 6 450 5.36e-63 211
MS.gene26257.t1 AT1G05680 30.193 467 281 14 10 453 6 450 4.07e-60 203
MS.gene26257.t1 AT1G22360 28.333 480 300 12 10 456 10 478 2.52e-59 202
MS.gene26257.t1 AT1G22400 30.021 483 289 16 10 456 13 482 1.81e-58 200
MS.gene26257.t1 AT1G05560 27.579 475 287 12 10 455 5 451 2.03e-57 197
MS.gene26257.t1 AT2G31750 28.419 468 298 11 9 457 7 456 3.69e-57 196
MS.gene26257.t1 AT1G05560 27.579 475 287 12 10 455 55 501 9.02e-57 196
MS.gene26257.t1 AT2G31750 28.419 468 298 11 9 457 7 456 9.08e-57 195
MS.gene26257.t1 AT2G28080 29.075 454 283 11 14 444 22 459 1.75e-56 194
MS.gene26257.t1 AT1G22340 28.958 480 296 13 10 455 13 481 3.20e-56 194
MS.gene26257.t1 AT2G43820 30.917 469 272 17 10 455 7 446 1.06e-55 191
MS.gene26257.t1 AT1G22360 26.875 480 295 11 10 456 10 466 1.63e-54 189
MS.gene26257.t1 AT2G43840 29.806 463 285 15 10 455 7 446 7.11e-54 187
MS.gene26257.t1 AT2G43840 29.806 463 285 15 10 455 7 446 9.93e-54 186
MS.gene26257.t1 AT1G22380 28.125 480 301 13 10 456 13 481 1.03e-53 187
MS.gene26257.t1 AT1G78270 27.984 486 294 14 10 456 13 481 4.24e-53 186
MS.gene26257.t1 AT1G24100 28.926 484 286 15 2 455 3 458 5.99e-53 184
MS.gene26257.t1 AT4G15550 27.443 481 296 12 10 456 13 474 9.58e-53 184
MS.gene26257.t1 AT2G23260 27.660 470 303 14 2 455 5 453 5.95e-52 182
MS.gene26257.t1 AT2G23250 30.087 462 279 17 11 455 1 435 4.60e-51 179
MS.gene26257.t1 AT3G46660 28.602 472 292 14 1 452 6 452 1.52e-49 175
MS.gene26257.t1 AT1G22370 27.292 480 300 11 10 456 13 476 1.72e-49 176
MS.gene26257.t1 AT2G31790 27.897 466 295 13 10 453 8 454 1.24e-48 173
MS.gene26257.t1 AT4G15480 26.439 469 307 11 10 452 19 475 3.12e-47 170
MS.gene26257.t1 AT3G46670 26.850 473 297 15 1 452 1 445 3.40e-47 169
MS.gene26257.t1 AT4G01070 26.940 464 295 14 10 444 8 456 7.78e-47 169
MS.gene26257.t1 AT5G59590 25.678 479 302 13 1 455 1 449 1.84e-46 167
MS.gene26257.t1 AT1G05530 25.780 481 303 13 3 456 2 455 1.10e-45 165
MS.gene26257.t1 AT3G21560 26.283 487 310 14 1 455 3 472 1.72e-45 165
MS.gene26257.t1 AT5G59580 26.809 470 289 14 10 455 9 447 2.62e-45 164
MS.gene26257.t1 AT5G38040 26.797 459 286 13 19 455 19 449 1.38e-44 162
MS.gene26257.t1 AT5G38010 25.996 477 307 13 1 455 1 453 2.01e-44 161
MS.gene26257.t1 AT4G14090 25.376 465 304 14 10 454 13 454 1.09e-43 159
MS.gene26257.t1 AT2G36750 26.892 502 289 17 10 458 10 486 2.10e-43 159
MS.gene26257.t1 AT2G36800 26.471 510 299 18 2 458 4 490 4.75e-43 159
MS.gene26257.t1 AT2G16890 27.686 484 287 16 10 455 9 467 3.56e-41 153
MS.gene26257.t1 AT1G10400 27.708 480 287 19 10 454 7 461 6.96e-41 152
MS.gene26257.t1 AT5G14860 26.531 490 294 16 10 455 8 475 8.14e-41 152
MS.gene26257.t1 AT3G46680 26.022 465 297 15 10 453 9 447 9.23e-41 151
MS.gene26257.t1 AT2G36780 25.806 496 303 19 10 458 14 491 1.06e-40 152
MS.gene26257.t1 AT3G21790 25.410 488 309 11 10 455 4 478 1.18e-40 152
MS.gene26257.t1 AT3G02100 27.932 469 289 16 10 453 13 457 3.31e-40 150
MS.gene26257.t1 AT3G46720 27.489 462 283 14 10 452 9 437 5.58e-40 149
MS.gene26257.t1 AT4G15500 25.577 477 311 15 6 456 5 463 1.35e-39 149
MS.gene26257.t1 AT3G11340 25.926 459 298 13 14 456 13 445 1.53e-39 148
MS.gene26257.t1 AT3G53160 26.316 494 301 16 10 457 8 484 2.38e-39 148
MS.gene26257.t1 AT3G21760 25.662 491 306 13 10 455 4 480 3.72e-39 148
MS.gene26257.t1 AT3G46650 24.628 471 306 10 1 458 1 435 4.84e-39 146
MS.gene26257.t1 AT3G21800 24.897 486 308 13 11 455 6 475 5.26e-39 147
MS.gene26257.t1 AT4G15490 25.519 482 312 16 5 456 3 467 6.47e-39 147
MS.gene26257.t1 AT5G05900 26.998 463 304 10 10 458 8 450 1.21e-38 145
MS.gene26257.t1 AT2G36790 26.761 497 297 18 10 458 13 490 1.65e-38 146
MS.gene26257.t1 AT1G01390 28.067 481 278 14 10 449 25 478 1.74e-38 146
MS.gene26257.t1 AT1G01420 25.361 485 285 15 10 449 11 463 2.08e-38 145
MS.gene26257.t1 AT1G01390 28.067 481 278 14 10 449 8 461 2.08e-38 145
MS.gene26257.t1 AT3G46690 26.522 460 299 12 10 452 9 446 2.10e-38 145
MS.gene26257.t1 AT1G01420 25.361 485 285 15 10 449 8 460 2.28e-38 145
MS.gene26257.t1 AT2G36760 24.540 489 316 15 10 457 14 490 2.98e-38 145
MS.gene26257.t1 AT5G05870 27.215 474 290 14 10 455 8 454 8.36e-38 144
MS.gene26257.t1 AT2G36770 25.306 490 311 16 10 457 14 490 1.33e-37 144
MS.gene26257.t1 AT3G21780 25.996 477 310 13 10 455 4 468 1.64e-37 143
MS.gene26257.t1 AT2G15480 27.660 376 234 12 107 455 126 490 4.57e-37 142
MS.gene26257.t1 AT2G15480 28.261 368 232 12 107 455 126 480 6.43e-37 141
MS.gene26257.t1 AT2G16890 28.341 434 249 15 10 405 9 418 1.01e-36 140
MS.gene26257.t1 AT2G29740 27.140 479 300 17 9 452 7 471 1.42e-36 140
MS.gene26257.t1 AT3G46700 25.153 489 273 17 10 458 9 444 4.40e-36 139
MS.gene26257.t1 AT2G15490 27.174 368 236 11 107 455 123 477 8.00e-36 138
MS.gene26257.t1 AT1G73880 27.515 487 295 19 4 458 9 469 1.04e-35 138
MS.gene26257.t1 AT3G53150 26.036 507 299 16 10 457 22 511 1.22e-35 138
MS.gene26257.t1 AT2G15490 26.954 371 236 11 107 455 123 480 1.93e-35 137
MS.gene26257.t1 AT4G34131 25.948 501 301 19 1 454 1 478 4.06e-35 136
MS.gene26257.t1 AT5G05880 26.180 466 295 13 10 453 8 446 6.75e-35 135
MS.gene26257.t1 AT3G55700 24.948 477 311 14 1 456 1 451 3.01e-34 134
MS.gene26257.t1 AT4G15280 23.992 496 305 14 10 457 4 475 7.47e-34 133
MS.gene26257.t1 AT4G15280 23.992 496 305 14 10 457 36 507 9.48e-34 133
MS.gene26257.t1 AT3G55710 24.895 474 303 16 10 456 8 455 1.33e-33 132
MS.gene26257.t1 AT5G03490 27.922 462 276 16 10 443 19 451 2.23e-33 131
MS.gene26257.t1 AT3G21750 24.691 486 307 13 10 456 4 469 4.29e-33 130
MS.gene26257.t1 AT2G29730 30.651 261 166 6 207 458 211 465 7.83e-33 130
MS.gene26257.t1 AT1G07240 27.273 363 238 9 110 456 124 476 2.15e-32 129
MS.gene26257.t1 AT4G34138 24.795 488 311 14 7 455 8 478 2.60e-32 129
MS.gene26257.t1 AT2G26480 24.892 462 309 14 10 456 8 446 2.93e-32 128
MS.gene26257.t1 AT4G15260 29.452 292 171 7 191 457 75 356 6.19e-32 125
MS.gene26257.t1 AT1G07250 33.460 263 155 7 208 457 219 474 7.65e-32 127
MS.gene26257.t1 AT5G05890 24.307 469 302 12 10 452 8 449 8.80e-32 127
MS.gene26257.t1 AT3G16520 29.139 302 188 9 165 452 167 456 5.21e-31 124
MS.gene26257.t1 AT5G05860 23.679 473 323 13 1 458 1 450 6.34e-31 124
MS.gene26257.t1 AT2G29750 26.132 486 303 18 9 456 7 474 1.17e-30 124
MS.gene26257.t1 AT5G66690 25.478 471 296 15 10 445 7 457 1.61e-30 123
MS.gene26257.t1 AT1G07260 31.698 265 156 9 208 456 217 472 3.72e-30 122
MS.gene26257.t1 AT3G50740 24.206 504 293 20 10 458 7 476 4.37e-30 122
MS.gene26257.t1 AT5G12890 24.803 508 301 18 2 456 3 482 2.86e-29 120
MS.gene26257.t1 AT5G65550 23.282 451 295 13 3 422 2 432 3.12e-29 119
MS.gene26257.t1 AT2G29710 21.926 488 313 14 9 456 4 463 4.78e-29 119
MS.gene26257.t1 AT2G18570 24.160 476 303 16 10 448 5 459 5.22e-29 119
MS.gene26257.t1 AT5G37950 25.625 320 214 9 61 365 33 343 6.04e-29 117
MS.gene26257.t1 AT5G26310 23.868 486 285 18 10 445 7 457 6.60e-29 119
MS.gene26257.t1 AT2G18560 28.289 304 179 9 171 448 79 369 2.22e-28 115
MS.gene26257.t1 AT5G17030 24.059 478 317 19 3 458 5 458 5.64e-28 116
MS.gene26257.t1 AT3G16520 29.000 300 182 10 165 450 167 449 8.00e-28 115
MS.gene26257.t1 AT3G16520 29.066 289 179 9 165 439 167 443 9.84e-28 115
MS.gene26257.t1 AT4G34135 26.596 376 250 10 96 454 114 480 1.93e-27 114
MS.gene26257.t1 AT1G51210 24.773 440 285 17 10 430 20 432 3.72e-27 113
MS.gene26257.t1 AT5G17050 22.105 475 331 14 3 458 5 459 9.35e-27 112
MS.gene26257.t1 AT5G37950 25.000 320 210 9 61 365 33 337 1.41e-26 110
MS.gene26257.t1 AT4G36770 24.017 483 275 16 9 438 3 446 3.39e-26 110
MS.gene26257.t1 AT1G22370 24.920 313 200 7 165 456 8 306 2.81e-25 105
MS.gene26257.t1 AT5G17040 23.391 466 312 17 10 458 5 442 5.77e-25 107
MS.gene26257.t1 AT3G22250 24.342 456 282 17 11 427 9 440 2.02e-24 105
MS.gene26257.t1 AT1G06000 24.116 481 291 20 1 455 1 433 2.87e-23 102
MS.gene26257.t1 AT5G17040 27.000 300 189 12 171 458 59 340 9.18e-22 96.3
MS.gene26257.t1 AT5G49690 24.406 463 290 18 8 440 8 440 3.33e-21 96.3
MS.gene26257.t1 AT1G30530 22.458 472 327 15 3 458 5 453 5.98e-21 95.5
MS.gene26257.t1 AT4G01070 25.161 310 212 9 10 310 8 306 1.82e-19 89.7
MS.gene26257.t1 AT5G53990 22.371 447 297 16 10 436 6 422 2.36e-18 87.4
MS.gene26257.t1 AT1G64910 22.422 446 298 16 10 436 6 422 6.63e-17 83.2
MS.gene26257.t1 AT1G64920 22.321 448 292 17 10 432 6 422 2.29e-14 75.5
MS.gene26257.t1 AT2G22590 21.663 457 285 17 9 422 14 440 5.01e-14 74.3
MS.gene26257.t1 AT5G54010 21.911 429 293 16 10 419 6 411 5.99e-14 73.9
MS.gene26257.t1 AT3G29630 25.893 224 151 5 218 432 204 421 1.17e-13 73.2
MS.gene26257.t1 AT1G50580 24.066 241 163 5 215 444 200 431 2.53e-13 72.0
MS.gene26257.t1 AT3G29630 27.461 193 130 4 253 436 208 399 1.36e-12 69.7
MS.gene26257.t1 AT2G22930 21.749 446 293 17 10 432 6 418 6.63e-11 64.7
MS.gene26257.t1 AT4G27570 22.800 250 171 7 218 458 210 446 9.38e-11 64.3

Find 109 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTAGTGTTACTCGATTT+TGG 0.123327 5.4:-59024522 None:intergenic
ATCCTTCTATTGGTGGATTT+TGG 0.190842 5.4:+59024784 MS.gene26257:CDS
AAGGCTAGTGCATGAATTTA+TGG 0.227142 5.4:+59024986 MS.gene26257:CDS
ACTATCATCTTACTATTAAA+TGG 0.227718 5.4:-59024888 None:intergenic
GTGAGGTTACAAGAGATATT+AGG 0.232107 5.4:+59025018 MS.gene26257:CDS
AGCTTATGTTGTTGGGTATT+GGG 0.267865 5.4:-59021787 None:intergenic
TCATCAGATGGGACTGGTTT+TGG 0.268167 5.4:+59024731 MS.gene26257:CDS
AAGCTTATGTTGTTGGGTAT+TGG 0.271120 5.4:-59021788 None:intergenic
AATGGTTGGTCAATATATAT+TGG 0.273521 5.4:-59024870 None:intergenic
TTATGATACTTTGTTGTATT+GGG 0.282453 5.4:+59021952 MS.gene26257:CDS
AGTGCATGAATTTATGGATT+TGG 0.288494 5.4:+59024992 MS.gene26257:CDS
TCCTTGCCAATTTACACTAT+TGG 0.296442 5.4:+59024462 MS.gene26257:CDS
TCGCGACCACCCTGCATTCA+TGG 0.333611 5.4:+59021853 MS.gene26257:CDS
CTTTGTGTTCAAACAATGTT+TGG 0.334350 5.4:+59024655 MS.gene26257:CDS
ATAGTAGAGGATTGGAAAGT+TGG 0.334407 5.4:+59024906 MS.gene26257:CDS
TTTATGATACTTTGTTGTAT+TGG 0.344509 5.4:+59021951 MS.gene26257:CDS
TTGGTTACCTGGATATTTCA+TGG 0.344613 5.4:-59022089 None:intergenic
ATATTCCGGCAGCATTGTTT+TGG 0.359079 5.4:+59021999 MS.gene26257:CDS
GTAGGGCCAATAGTGTAAAT+TGG 0.369433 5.4:-59024468 None:intergenic
AGCTTGCAAAGGTTCATCAT+AGG 0.385438 5.4:-59021689 None:intergenic
TGAGGTTACAAGAGATATTA+GGG 0.397047 5.4:+59025019 MS.gene26257:CDS
CCTTTGTTGTTACTGAAGAA+TGG 0.400440 5.4:+59021744 MS.gene26257:CDS
ACAAAGGAAAGTCTTGTTGC+TGG 0.417413 5.4:+59024828 MS.gene26257:CDS
AGGCGAGTTGAGGAAATTCC+AGG 0.417980 5.4:-59024282 None:intergenic
AAACGTGTATGTTATATTCC+TGG 0.421313 5.4:+59024264 MS.gene26257:CDS
CGAGCGGAAGCTTATGTTGT+TGG 0.425735 5.4:-59021795 None:intergenic
CAAACAATGTTTGGTTCGTA+TGG 0.437262 5.4:+59024664 MS.gene26257:CDS
GACCAAAATCCACCAATAGA+AGG 0.438477 5.4:-59024786 None:intergenic
ATTGCATCATTCGTTTGCTT+CGG 0.439446 5.4:-59024335 None:intergenic
AGATGTTAAGAGAGATACTT+TGG 0.440222 5.4:+59024944 MS.gene26257:CDS
AGTTCAGAGGGAATAACGTT+GGG 0.441195 5.4:-59021821 None:intergenic
GTAAGATGATAGTAGAGGAT+TGG 0.443364 5.4:+59024898 MS.gene26257:CDS
GTATCATAAACAATGATAGA+AGG 0.452942 5.4:-59021938 None:intergenic
TAGCACGTAGTGAGGCTTCC+AGG 0.453153 5.4:+59024688 MS.gene26257:CDS
AGGCTAAAATTAGGTATGGT+AGG 0.454846 5.4:-59024486 None:intergenic
TTGTCACATCCTTCTATTGG+TGG 0.456210 5.4:+59024777 MS.gene26257:CDS
GATGTGACAAAACTCTCAAT+TGG 0.456769 5.4:-59024764 None:intergenic
ACTGATGAAGGCATTAAAAT+CGG 0.459982 5.4:-59025105 None:intergenic
TGCAAACCGAAGGAATATTC+CGG 0.461536 5.4:+59021985 MS.gene26257:CDS
GAGCGGAAGCTTATGTTGTT+GGG 0.464765 5.4:-59021794 None:intergenic
TGGTTACCTGGATATTTCAT+GGG 0.468144 5.4:-59022088 None:intergenic
CAAAGGAAAGTCTTGTTGCT+GGG 0.469520 5.4:+59024829 MS.gene26257:CDS
TGTCTTAATGCAATCACAAA+TGG 0.476164 5.4:+59025068 MS.gene26257:CDS
ATGCTGCCGGAATATTCCTT+CGG 0.476981 5.4:-59021991 None:intergenic
ATATTGCCTCGTACAGGAAA+AGG 0.477577 5.4:-59021662 None:intergenic
TAGTGAGGCTTCCAGGTTGA+AGG 0.485335 5.4:+59024695 MS.gene26257:CDS
AATAAGGCTAAAATTAGGTA+TGG 0.497110 5.4:-59024490 None:intergenic
TCATCTTACTATTAAATGGT+TGG 0.503530 5.4:-59024884 None:intergenic
TGAAGAAAGATGAAATAGTA+AGG 0.508155 5.4:+59024967 MS.gene26257:CDS
CACTACCCCATGAAATATCC+AGG 0.513138 5.4:+59022082 MS.gene26257:CDS
TATGTTGTTGGGTATTGGGT+CGG 0.515079 5.4:-59021783 None:intergenic
TGGTGGTCATCAGATGGGAC+TGG 0.516288 5.4:+59024725 MS.gene26257:CDS
TAGAAGGAGGGTGATAAAGT+TGG 0.520246 5.4:-59021922 None:intergenic
TCCAGGTTGAAGGAAATTTG+TGG 0.521470 5.4:+59024705 MS.gene26257:CDS
AAAGATGGAAGCACCCTTTG+AGG 0.523866 5.4:+59021889 MS.gene26257:CDS
ATGCATTACATCACTGATGA+AGG 0.527862 5.4:-59025117 None:intergenic
GCTTGCAAAGGTTCATCATA+GGG 0.528482 5.4:-59021688 None:intergenic
GTTGTTGGGTATTGGGTCGG+AGG 0.531108 5.4:-59021780 None:intergenic
AATTTGTGGTGGTCATCAGA+TGG 0.534481 5.4:+59024719 MS.gene26257:CDS
GGCTAAAATTAGGTATGGTA+GGG 0.537446 5.4:-59024485 None:intergenic
GGGTTGATATTGCCTCGTAC+AGG 0.540185 5.4:-59021668 None:intergenic
TTGGTCAAGTAGCTCCTCAA+AGG 0.540370 5.4:-59021903 None:intergenic
GGAAGATGTCATGACAAAGA+TGG 0.541860 5.4:+59021874 MS.gene26257:CDS
ACCATGTGGCAGAGGGAAGT+TGG 0.542705 5.4:-59021632 None:intergenic
CGTTTAGAGCGAAATCAGCT+AGG 0.545017 5.4:-59024302 None:intergenic
TGGCTTGATTCACAACCCAT+TGG 0.545647 5.4:+59024561 MS.gene26257:CDS
CATGAATTTATGGATTTGGA+TGG 0.547359 5.4:+59024996 MS.gene26257:CDS
TATATAAAGAACAGAACCAA+TGG 0.550612 5.4:-59024577 None:intergenic
ATGACATCTTCCATGAATGC+AGG 0.551715 5.4:-59021863 None:intergenic
GCATTGCCACCATGTGGCAG+AGG 0.551857 5.4:-59021640 None:intergenic
ACCACAAATTTCCTTCAACC+TGG 0.556905 5.4:-59024706 None:intergenic
CAGTTCAGAGGGAATAACGT+TGG 0.564485 5.4:-59021822 None:intergenic
GAGAAAATAGATGTCGGCAT+AGG 0.569273 5.4:-59022022 None:intergenic
CAGTAACAACAAAGGTAACA+TGG 0.570140 5.4:-59021736 None:intergenic
TGGTCAAGTAGCTCCTCAAA+GGG 0.571015 5.4:-59021902 None:intergenic
TAATAGTAAGATGATAGTAG+AGG 0.574408 5.4:+59024893 MS.gene26257:CDS
ATATAAAGAACAGAACCAAT+GGG 0.575141 5.4:-59024576 None:intergenic
ATAGGCCAAAACAATGCTGC+CGG 0.576650 5.4:-59022004 None:intergenic
TTTGTTGTATTGGGCTGTTG+TGG 0.580326 5.4:+59021961 MS.gene26257:CDS
GCCAATAGTGTAAATTGGCA+AGG 0.585367 5.4:-59024463 None:intergenic
AAAGGAAAGTCTTGTTGCTG+GGG 0.587468 5.4:+59024830 MS.gene26257:CDS
GAAAGTTGGATTGAGAGTGA+AGG 0.587532 5.4:+59024920 MS.gene26257:CDS
ATTTGTGGTGGTCATCAGAT+GGG 0.588317 5.4:+59024720 MS.gene26257:CDS
ATGCAGGGTGGTCGCGACTG+CGG 0.594099 5.4:-59021847 None:intergenic
TCATAAACAATGATAGAAGG+AGG 0.598444 5.4:-59021935 None:intergenic
CATTGCCACCATGTGGCAGA+GGG 0.603575 5.4:-59021639 None:intergenic
GAAATCAGCTAGGCGAGTTG+AGG 0.607708 5.4:-59024292 None:intergenic
TTGAGACAAGAAGCTTGCAA+AGG 0.617450 5.4:-59021700 None:intergenic
TGACATCTTCCATGAATGCA+GGG 0.618864 5.4:-59021862 None:intergenic
ACCAACTTCCCTCTGCCACA+TGG 0.621008 5.4:+59021631 MS.gene26257:CDS
ATTTATGGATTTGGATGGTG+AGG 0.621559 5.4:+59025001 MS.gene26257:CDS
CTTAATGCAATCACAAATGG+TGG 0.622197 5.4:+59025071 MS.gene26257:CDS
TTGTGGTTGGAATTCAACAA+AGG 0.623716 5.4:+59024812 MS.gene26257:CDS
GCGACTGCGGATCAGTTCAG+AGG 0.625526 5.4:-59021834 None:intergenic
CGACTGCGGATCAGTTCAGA+GGG 0.627095 5.4:-59021833 None:intergenic
ATCATAGCTACTACATTGAG+TGG 0.635913 5.4:+59024541 MS.gene26257:CDS
CATAAACAATGATAGAAGGA+GGG 0.640268 5.4:-59021934 None:intergenic
AGGTTGAAGGAAATTTGTGG+TGG 0.640369 5.4:+59024708 MS.gene26257:CDS
GGTTACCTGGATATTTCATG+GGG 0.641376 5.4:-59022087 None:intergenic
CTGTTGTGGTTGCAAACCGA+AGG 0.645934 5.4:+59021975 MS.gene26257:CDS
CGTATGGATAGCACGTAGTG+AGG 0.651069 5.4:+59024680 MS.gene26257:CDS
TCTGTTCTTTATATAGCACA+AGG 0.652872 5.4:+59024585 MS.gene26257:CDS
AACACAGAGAAAATAGATGT+CGG 0.657889 5.4:-59022028 None:intergenic
CCATTCTTCAGTAACAACAA+AGG 0.660876 5.4:-59021744 None:intergenic
GAATAACGTTGGGGATCGAG+CGG 0.671055 5.4:-59021811 None:intergenic
GTTCAGAGGGAATAACGTTG+GGG 0.677040 5.4:-59021820 None:intergenic
GAAAAGGCATTGCCACCATG+TGG 0.683912 5.4:-59021646 None:intergenic
AACTTCCCTCTGCCACATGG+TGG 0.686295 5.4:+59021634 MS.gene26257:CDS
CATCTTCCATGAATGCAGGG+TGG 0.759426 5.4:-59021859 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATAGAAATTTGTAT+TGG - chr5.4:59022754-59022773 None:intergenic 10.0%
!! TAAAAATAGAAATTTGTATT+GGG - chr5.4:59022753-59022772 None:intergenic 10.0%
!! TTGCAATAATTTATATTTAA+TGG - chr5.4:59023957-59023976 None:intergenic 10.0%
!!! ATAAAATAAATTTTTTTGTG+TGG + chr5.4:59023415-59023434 MS.gene26257:intron 10.0%
!!! ATAATATTTTGACTTTTATA+AGG + chr5.4:59022705-59022724 MS.gene26257:intron 10.0%
!!! TTTTTAATACTTATAATGAT+GGG + chr5.4:59023791-59023810 MS.gene26257:intron 10.0%
!! AAATAATATTGAGTAATGAT+AGG - chr5.4:59023915-59023934 None:intergenic 15.0%
!! ACTAAATATTATTGGAATAT+TGG - chr5.4:59022117-59022136 None:intergenic 15.0%
!! CAACAAATATCTAATATTAT+TGG - chr5.4:59022809-59022828 None:intergenic 15.0%
!!! ATTTTGGATTGTTTTTAATA+AGG - chr5.4:59024509-59024528 None:intergenic 15.0%
!!! CTTTTTAATACTTATAATGA+TGG + chr5.4:59023790-59023809 MS.gene26257:intron 15.0%
!!! GAAGAAGTTTAATTTTTATA+TGG - chr5.4:59022981-59023000 None:intergenic 15.0%
!!! TTAATTTTTTTTATGTGTGT+GGG + chr5.4:59022926-59022945 MS.gene26257:intron 15.0%
!!! TTTAATTTTTTTTATGTGTG+TGG + chr5.4:59022925-59022944 MS.gene26257:intron 15.0%
!!! TTTTTAATAAGGCTAAAATT+AGG - chr5.4:59024498-59024517 None:intergenic 15.0%
!! ACTATCATCTTACTATTAAA+TGG - chr5.4:59024891-59024910 None:intergenic 20.0%
!! ATGATAGATATGATATGTTA+GGG - chr5.4:59023365-59023384 None:intergenic 20.0%
!! CCAATAATATTTAGTTGTTA+AGG + chr5.4:59022122-59022141 MS.gene26257:intron 20.0%
!! CCTTAACAACTAAATATTAT+TGG - chr5.4:59022125-59022144 None:intergenic 20.0%
!! GATAGATACAAAATGAATTT+GGG + chr5.4:59023582-59023601 MS.gene26257:intron 20.0%
!! TATGATAGATATGATATGTT+AGG - chr5.4:59023366-59023385 None:intergenic 20.0%
!! TATTATTGGAATATTGGATT+TGG - chr5.4:59022111-59022130 None:intergenic 20.0%
!! TGATCTTAAATAAAAATGCA+TGG + chr5.4:59024177-59024196 MS.gene26257:intron 20.0%
!! TGGAAATTGTGATAAAAATA+TGG + chr5.4:59023241-59023260 MS.gene26257:intron 20.0%
!!! AATTTTTTTTGGAGTCAAAT+CGG - chr5.4:59023698-59023717 None:intergenic 20.0%
!!! ATCATTTTTGATATCGTTAT+TGG + chr5.4:59023637-59023656 MS.gene26257:intron 20.0%
!!! ATGATGCAATATTTTTTGAA+AGG + chr5.4:59024348-59024367 MS.gene26257:CDS 20.0%
!!! ATTTTTTGAAAGGTTTTGAA+TGG + chr5.4:59024358-59024377 MS.gene26257:CDS 20.0%
!!! TAATTTTTTTTATGTGTGTG+GGG + chr5.4:59022927-59022946 MS.gene26257:intron 20.0%
!!! TATCTATTTTTCCTTTTGAA+CGG + chr5.4:59022460-59022479 MS.gene26257:intron 20.0%
!!! TCATTTTTGATATCGTTATT+GGG + chr5.4:59023638-59023657 MS.gene26257:intron 20.0%
!!! TTATGATACTTTGTTGTATT+GGG + chr5.4:59021952-59021971 MS.gene26257:CDS 20.0%
!!! TTTATGATACTTTGTTGTAT+TGG + chr5.4:59021951-59021970 MS.gene26257:CDS 20.0%
!!! TTTTGATTTTAAGACATCAA+TGG - chr5.4:59024439-59024458 None:intergenic 20.0%
! AATAAGGCTAAAATTAGGTA+TGG - chr5.4:59024493-59024512 None:intergenic 25.0%
! ATAAAATTTGTGTGAACACA+AGG + chr5.4:59022830-59022849 MS.gene26257:intron 25.0%
! ATATAAAGAACAGAACCAAT+GGG - chr5.4:59024579-59024598 None:intergenic 25.0%
! GGATAGATACAAAATGAATT+TGG + chr5.4:59023581-59023600 MS.gene26257:intron 25.0%
! GTATCATAAACAATGATAGA+AGG - chr5.4:59021941-59021960 None:intergenic 25.0%
! TAATAGTAAGATGATAGTAG+AGG + chr5.4:59024893-59024912 MS.gene26257:CDS 25.0%
! TAATATTGAGTAATGATAGG+TGG - chr5.4:59023912-59023931 None:intergenic 25.0%
! TATATAAAGAACAGAACCAA+TGG - chr5.4:59024580-59024599 None:intergenic 25.0%
! TATATTGGAGAAGTCAAAAA+TGG - chr5.4:59024858-59024877 None:intergenic 25.0%
! TCATCTTACTATTAAATGGT+TGG - chr5.4:59024887-59024906 None:intergenic 25.0%
! TCTAATGTTTCTTCAATACA+CGG + chr5.4:59023995-59024014 MS.gene26257:intron 25.0%
! TGAAGAAAGATGAAATAGTA+AGG + chr5.4:59024967-59024986 MS.gene26257:CDS 25.0%
! TTTCAATTTCAGTATCCTAT+CGG - chr5.4:59024109-59024128 None:intergenic 25.0%
!! AAAAGCAAGGTTTTACATAA+CGG + chr5.4:59022150-59022169 MS.gene26257:intron 25.0%
!! AAATGCAAACTTACTACTTT+TGG - chr5.4:59022679-59022698 None:intergenic 25.0%
!! AATGGTTGGTCAATATATAT+TGG - chr5.4:59024873-59024892 None:intergenic 25.0%
!! TTAATACTTATAATGATGGG+AGG + chr5.4:59023794-59023813 MS.gene26257:intron 25.0%
!!! AAAAATATGGTGTCACTATT+GGG + chr5.4:59023254-59023273 MS.gene26257:intron 25.0%
!!! TAAAAATATGGTGTCACTAT+TGG + chr5.4:59023253-59023272 MS.gene26257:intron 25.0%
AAACGTGTATGTTATATTCC+TGG + chr5.4:59024264-59024283 MS.gene26257:CDS 30.0%
AAATTGTGTATGACAGAGAA+TGG + chr5.4:59024237-59024256 MS.gene26257:intron 30.0%
AACACAGAGAAAATAGATGT+CGG - chr5.4:59022031-59022050 None:intergenic 30.0%
ACACTATACAACACGAAAAT+AGG + chr5.4:59022391-59022410 MS.gene26257:intron 30.0%
AGATGTTAAGAGAGATACTT+TGG + chr5.4:59024944-59024963 MS.gene26257:CDS 30.0%
AGTGCATGAATTTATGGATT+TGG + chr5.4:59024992-59025011 MS.gene26257:CDS 30.0%
CATAAACAATGATAGAAGGA+GGG - chr5.4:59021937-59021956 None:intergenic 30.0%
CATGAATTTATGGATTTGGA+TGG + chr5.4:59024996-59025015 MS.gene26257:CDS 30.0%
CTTTGTGTTCAAACAATGTT+TGG + chr5.4:59024655-59024674 MS.gene26257:CDS 30.0%
GTGTGTTGTGTTACATATTA+CGG + chr5.4:59022224-59022243 MS.gene26257:intron 30.0%
TAGAAATTTGTATTGGGAAG+TGG - chr5.4:59022747-59022766 None:intergenic 30.0%
TCATAAACAATGATAGAAGG+AGG - chr5.4:59021938-59021957 None:intergenic 30.0%
TCATAGGGTGAAGAAAATAA+TGG + chr5.4:59023139-59023158 MS.gene26257:intron 30.0%
TCTGTTCTTTATATAGCACA+AGG + chr5.4:59024585-59024604 MS.gene26257:CDS 30.0%
TGAGGTTACAAGAGATATTA+GGG + chr5.4:59025019-59025038 MS.gene26257:CDS 30.0%
TGTCTTAATGCAATCACAAA+TGG + chr5.4:59025068-59025087 MS.gene26257:CDS 30.0%
TTAAAATTGCTCAACAGATC+AGG + chr5.4:59024047-59024066 MS.gene26257:intron 30.0%
TTCAATTTCAGTATCCTATC+GGG - chr5.4:59024108-59024127 None:intergenic 30.0%
TTTATTACACCCCATATATG+CGG + chr5.4:59023668-59023687 MS.gene26257:intron 30.0%
! AGTGACCATTTTGTTCAAAA+AGG - chr5.4:59022066-59022085 None:intergenic 30.0%
! CAACACCTTTTTGAACAAAA+TGG + chr5.4:59022058-59022077 MS.gene26257:CDS 30.0%
! GATCTGTTGAGCAATTTTAA+TGG - chr5.4:59024047-59024066 None:intergenic 30.0%
! GTGAAATGTTTAACGTGTTT+TGG - chr5.4:59023087-59023106 None:intergenic 30.0%
! GTTATGTAAAACCTTGCTTT+TGG - chr5.4:59022151-59022170 None:intergenic 30.0%
!! AAACTTACTACTTTTGGTCA+AGG - chr5.4:59022673-59022692 None:intergenic 30.0%
!! AAATGTTTAACGTGTTTTGG+AGG - chr5.4:59023084-59023103 None:intergenic 30.0%
!! ACTGATGAAGGCATTAAAAT+CGG - chr5.4:59025108-59025127 None:intergenic 30.0%
!! TGATTAGTGTTACTCGATTT+TGG - chr5.4:59024525-59024544 None:intergenic 30.0%
!!! TTTTTTTGTGTGGTGTAAAC+CGG + chr5.4:59023425-59023444 MS.gene26257:intron 30.0%
AAAACACAACACCGTTCAAA+AGG - chr5.4:59022474-59022493 None:intergenic 35.0%
AAGCTTATGTTGTTGGGTAT+TGG - chr5.4:59021791-59021810 None:intergenic 35.0%
AAGGCTAGTGCATGAATTTA+TGG + chr5.4:59024986-59025005 MS.gene26257:CDS 35.0%
ACATCTCATCTAAGCTCTAT+TGG + chr5.4:59023560-59023579 MS.gene26257:intron 35.0%
AGAGCGTACAAGAAATTCAT+AGG + chr5.4:59023123-59023142 MS.gene26257:intron 35.0%
AGATCATCTACAACATTGTG+AGG - chr5.4:59024163-59024182 None:intergenic 35.0%
AGCTTATGTTGTTGGGTATT+GGG - chr5.4:59021790-59021809 None:intergenic 35.0%
AGGCTAAAATTAGGTATGGT+AGG - chr5.4:59024489-59024508 None:intergenic 35.0%
AGTCTCTTCTAACTTAACCA+CGG - chr5.4:59023536-59023555 None:intergenic 35.0%
ATAGTAGAGGATTGGAAAGT+TGG + chr5.4:59024906-59024925 MS.gene26257:CDS 35.0%
ATCATAGCTACTACATTGAG+TGG + chr5.4:59024541-59024560 MS.gene26257:CDS 35.0%
ATGCATTACATCACTGATGA+AGG - chr5.4:59025120-59025139 None:intergenic 35.0%
ATGGTGTATCACATTCGTAA+CGG + chr5.4:59022505-59022524 MS.gene26257:intron 35.0%
ATTGAGTAATGATAGGTGGA+CGG - chr5.4:59023908-59023927 None:intergenic 35.0%
ATTGCATCATTCGTTTGCTT+CGG - chr5.4:59024338-59024357 None:intergenic 35.0%
ATTTATGGATTTGGATGGTG+AGG + chr5.4:59025001-59025020 MS.gene26257:CDS 35.0%
CAGTAACAACAAAGGTAACA+TGG - chr5.4:59021739-59021758 None:intergenic 35.0%
CCATTCTTCAGTAACAACAA+AGG - chr5.4:59021747-59021766 None:intergenic 35.0%
CTGAAATTGAAAGCAATCTG+AGG + chr5.4:59024117-59024136 MS.gene26257:intron 35.0%
CTTAATGCAATCACAAATGG+TGG + chr5.4:59025071-59025090 MS.gene26257:CDS 35.0%
GAGCGTACAAGAAATTCATA+GGG + chr5.4:59023124-59023143 MS.gene26257:intron 35.0%
GATGTGACAAAACTCTCAAT+TGG - chr5.4:59024767-59024786 None:intergenic 35.0%
GGATACATTGTTCGAATACA+CGG + chr5.4:59022857-59022876 MS.gene26257:intron 35.0%
GGCTAAAATTAGGTATGGTA+GGG - chr5.4:59024488-59024507 None:intergenic 35.0%
GTAAGATGATAGTAGAGGAT+TGG + chr5.4:59024898-59024917 MS.gene26257:CDS 35.0%
GTGAGGTTACAAGAGATATT+AGG + chr5.4:59025018-59025037 MS.gene26257:CDS 35.0%
TCAATTTCAGTATCCTATCG+GGG - chr5.4:59024107-59024126 None:intergenic 35.0%
TCCTTGCCAATTTACACTAT+TGG + chr5.4:59024462-59024481 MS.gene26257:CDS 35.0%
TGGTTACCTGGATATTTCAT+GGG - chr5.4:59022091-59022110 None:intergenic 35.0%
TGTTAAGGAAACCAAAAGCA+AGG + chr5.4:59022137-59022156 MS.gene26257:intron 35.0%
TTATTACACCCCATATATGC+GGG + chr5.4:59023669-59023688 MS.gene26257:intron 35.0%
TTGGTTACCTGGATATTTCA+TGG - chr5.4:59022092-59022111 None:intergenic 35.0%
TTGTGGTTGGAATTCAACAA+AGG + chr5.4:59024812-59024831 MS.gene26257:CDS 35.0%
TTTATCTCACCCTGAAAAAC+AGG + chr5.4:59022586-59022605 MS.gene26257:intron 35.0%
TTTGTGTGAACACAAGGATA+TGG + chr5.4:59022836-59022855 MS.gene26257:intron 35.0%
! CAAACAATGTTTGGTTCGTA+TGG + chr5.4:59024664-59024683 MS.gene26257:CDS 35.0%
! CTACCTATACCTTTTTATCG+CGG + chr5.4:59022627-59022646 MS.gene26257:intron 35.0%
! GAATATTGGATTTGGTTACC+TGG - chr5.4:59022103-59022122 None:intergenic 35.0%
! GTTTTGTCACATCCTTCTAT+TGG + chr5.4:59024774-59024793 MS.gene26257:CDS 35.0%
!! ACATTCGTAACGGAGTTTTA+CGG + chr5.4:59022515-59022534 MS.gene26257:intron 35.0%
!! CCTTTGTTGTTACTGAAGAA+TGG + chr5.4:59021744-59021763 MS.gene26257:CDS 35.0%
!! GTTCAAAAAGGTGTTGATGT+TGG - chr5.4:59022054-59022073 None:intergenic 35.0%
!! TATTGGTAAAGAGTGTCGTT+AGG - chr5.4:59022792-59022811 None:intergenic 35.0%
!!! AGCACAAGGAAGTTTTTTCT+CGG + chr5.4:59024599-59024618 MS.gene26257:CDS 35.0%
!!! AGGTTTTAAATCCGCGAAAA+CGG - chr5.4:59022653-59022672 None:intergenic 35.0%
!!! ATCCTTCTATTGGTGGATTT+TGG + chr5.4:59024784-59024803 MS.gene26257:CDS 35.0%
!!! TGTGTTTTTTGCTTTCGCAA+TGG + chr5.4:59022486-59022505 MS.gene26257:intron 35.0%
!!! TTTTTTGTGTGGTGTAAACC+GGG + chr5.4:59023426-59023445 MS.gene26257:intron 35.0%
AAATCGGTATCCCGCATATA+TGG - chr5.4:59023682-59023701 None:intergenic 40.0%
AATCGGTATCCCGCATATAT+GGG - chr5.4:59023681-59023700 None:intergenic 40.0%
AATTTGTGGTGGTCATCAGA+TGG + chr5.4:59024719-59024738 MS.gene26257:CDS 40.0%
ACACGAAAATAGGCGATGAA+AGG + chr5.4:59022401-59022420 MS.gene26257:intron 40.0%
ACCACAAATTTCCTTCAACC+TGG - chr5.4:59024709-59024728 None:intergenic 40.0%
AGCTTGCAAAGGTTCATCAT+AGG - chr5.4:59021692-59021711 None:intergenic 40.0%
AGGTTGAAGGAAATTTGTGG+TGG + chr5.4:59024708-59024727 MS.gene26257:CDS 40.0%
AGTTCAGAGGGAATAACGTT+GGG - chr5.4:59021824-59021843 None:intergenic 40.0%
ATATTGCCTCGTACAGGAAA+AGG - chr5.4:59021665-59021684 None:intergenic 40.0%
ATGACATCTTCCATGAATGC+AGG - chr5.4:59021866-59021885 None:intergenic 40.0%
ATTTGTGGTGGTCATCAGAT+GGG + chr5.4:59024720-59024739 MS.gene26257:CDS 40.0%
GAAAGTTGGATTGAGAGTGA+AGG + chr5.4:59024920-59024939 MS.gene26257:CDS 40.0%
GACCAAAATCCACCAATAGA+AGG - chr5.4:59024789-59024808 None:intergenic 40.0%
GAGAAAATAGATGTCGGCAT+AGG - chr5.4:59022025-59022044 None:intergenic 40.0%
GCCAATAGTGTAAATTGGCA+AGG - chr5.4:59024466-59024485 None:intergenic 40.0%
GCTTGCAAAGGTTCATCATA+GGG - chr5.4:59021691-59021710 None:intergenic 40.0%
GGAAGATGTCATGACAAAGA+TGG + chr5.4:59021874-59021893 MS.gene26257:CDS 40.0%
GGTTACCTGGATATTTCATG+GGG - chr5.4:59022090-59022109 None:intergenic 40.0%
GTAGGGCCAATAGTGTAAAT+TGG - chr5.4:59024471-59024490 None:intergenic 40.0%
TAGAAGGAGGGTGATAAAGT+TGG - chr5.4:59021925-59021944 None:intergenic 40.0%
TATCACAATTTCCACAGCAC+AGG - chr5.4:59023235-59023254 None:intergenic 40.0%
TGACATCTTCCATGAATGCA+GGG - chr5.4:59021865-59021884 None:intergenic 40.0%
TGCAAACCGAAGGAATATTC+CGG + chr5.4:59021985-59022004 MS.gene26257:CDS 40.0%
TTGAGACAAGAAGCTTGCAA+AGG - chr5.4:59021703-59021722 None:intergenic 40.0%
TTGTCACATCCTTCTATTGG+TGG + chr5.4:59024777-59024796 MS.gene26257:CDS 40.0%
! AAGCAATCTGAGGTGCTTAT+TGG + chr5.4:59024127-59024146 MS.gene26257:intron 40.0%
! ACGGAGTTTTACGGTTGTAT+CGG + chr5.4:59022524-59022543 MS.gene26257:intron 40.0%
! AGCAATCTGAGGTGCTTATT+GGG + chr5.4:59024128-59024147 MS.gene26257:intron 40.0%
! ATATTCCGGCAGCATTGTTT+TGG + chr5.4:59021999-59022018 MS.gene26257:CDS 40.0%
! CTTTTTGTCATGGTCGTAAC+AGG + chr5.4:59022547-59022566 MS.gene26257:intron 40.0%
! TCCAGGTTGAAGGAAATTTG+TGG + chr5.4:59024705-59024724 MS.gene26257:CDS 40.0%
! TTTGTTGTATTGGGCTGTTG+TGG + chr5.4:59021961-59021980 MS.gene26257:CDS 40.0%
! TTTTGTGAGTAAACCCCGAT+AGG + chr5.4:59024091-59024110 MS.gene26257:intron 40.0%
!! AAAGGAAAGTCTTGTTGCTG+GGG + chr5.4:59024830-59024849 MS.gene26257:CDS 40.0%
!! ACAAAGGAAAGTCTTGTTGC+TGG + chr5.4:59024828-59024847 MS.gene26257:CDS 40.0%
!! AGCGTTTTTGCCTGTTTTTC+AGG - chr5.4:59022599-59022618 None:intergenic 40.0%
!! CAAAGGAAAGTCTTGTTGCT+GGG + chr5.4:59024829-59024848 MS.gene26257:CDS 40.0%
!! GATTTTGGTCTCATTGTGGT+TGG + chr5.4:59024799-59024818 MS.gene26257:CDS 40.0%
!! GCGTTTTTGCCTGTTTTTCA+GGG - chr5.4:59022598-59022617 None:intergenic 40.0%
!! TATGTTGTTGGGTATTGGGT+CGG - chr5.4:59021786-59021805 None:intergenic 40.0%
!!! GTTGTATCGGCTTTTTGTCA+TGG + chr5.4:59022537-59022556 MS.gene26257:intron 40.0%
ACAATTTCCACAGCACAGGA+TGG - chr5.4:59023231-59023250 None:intergenic 45.0%
ACAGGCAAAAACGCTATCAG+TGG + chr5.4:59022604-59022623 MS.gene26257:intron 45.0%
ATAGGCCAAAACAATGCTGC+CGG - chr5.4:59022007-59022026 None:intergenic 45.0%
ATCAACTACCACCAACACTG+GGG + chr5.4:59023867-59023886 MS.gene26257:intron 45.0%
ATCGGTATCCCGCATATATG+GGG - chr5.4:59023680-59023699 None:intergenic 45.0%
ATGCTGCCGGAATATTCCTT+CGG - chr5.4:59021994-59022013 None:intergenic 45.0%
CACTACCCCATGAAATATCC+AGG + chr5.4:59022082-59022101 MS.gene26257:CDS 45.0%
CAGTTCAGAGGGAATAACGT+TGG - chr5.4:59021825-59021844 None:intergenic 45.0%
CATCAACTACCACCAACACT+GGG + chr5.4:59023866-59023885 MS.gene26257:intron 45.0%
CGTTAAGGTTGTCGCGATTT+CGG + chr5.4:59022194-59022213 MS.gene26257:intron 45.0%
GAGCGGAAGCTTATGTTGTT+GGG - chr5.4:59021797-59021816 None:intergenic 45.0%
GCGCGAGAAATCAATAGAGT+AGG - chr5.4:59023008-59023027 None:intergenic 45.0%
GTTACATATTACGGTCGTCG+CGG + chr5.4:59022233-59022252 MS.gene26257:intron 45.0%
GTTCAGAGGGAATAACGTTG+GGG - chr5.4:59021823-59021842 None:intergenic 45.0%
TCTAACTTAACCACGGCCAT+GGG - chr5.4:59023529-59023548 None:intergenic 45.0%
TGGCTTGATTCACAACCCAT+TGG + chr5.4:59024561-59024580 MS.gene26257:CDS 45.0%
TGGTCAAGTAGCTCCTCAAA+GGG - chr5.4:59021905-59021924 None:intergenic 45.0%
TTACATAACGGTCGCAGTCT+CGG + chr5.4:59022162-59022181 MS.gene26257:intron 45.0%
TTCTAACTTAACCACGGCCA+TGG - chr5.4:59023530-59023549 None:intergenic 45.0%
TTGGTCAAGTAGCTCCTCAA+AGG - chr5.4:59021906-59021925 None:intergenic 45.0%
! CGTTTAGAGCGAAATCAGCT+AGG - chr5.4:59024305-59024324 None:intergenic 45.0%
!! AAAGATGGAAGCACCCTTTG+AGG + chr5.4:59021889-59021908 MS.gene26257:CDS 45.0%
!! GGTGGATTTTGGTCTCATTG+TGG + chr5.4:59024795-59024814 MS.gene26257:CDS 45.0%
!!! AGATGGGACTGGTTTTGGAA+TGG + chr5.4:59024736-59024755 MS.gene26257:CDS 45.0%
!!! TCATCAGATGGGACTGGTTT+TGG + chr5.4:59024731-59024750 MS.gene26257:CDS 45.0%
!!! ATGTATTAAATAATTTTTTT+TGG - chr5.4:59023709-59023728 None:intergenic 5.0%
!!! TTATTTAATATTTTATAAGA+TGG + chr5.4:59022337-59022356 MS.gene26257:intron 5.0%
CAACACTGGGGTTGCCAAAT+GGG + chr5.4:59023879-59023898 MS.gene26257:intron 50.0%
CAAGACTGGATTCGAACCCA+TGG + chr5.4:59023510-59023529 MS.gene26257:intron 50.0%
CATCTTCCATGAATGCAGGG+TGG - chr5.4:59021862-59021881 None:intergenic 50.0%
CATGGGTTCGAATCCAGTCT+TGG - chr5.4:59023512-59023531 None:intergenic 50.0%
CCATCAACTACCACCAACAC+TGG + chr5.4:59023865-59023884 MS.gene26257:intron 50.0%
CGAAAACGGCCGCGATAAAA+AGG - chr5.4:59022639-59022658 None:intergenic 50.0%
CGAATCCAGTCTTGGACATG+CGG - chr5.4:59023504-59023523 None:intergenic 50.0%
CGAGCGGAAGCTTATGTTGT+TGG - chr5.4:59021798-59021817 None:intergenic 50.0%
CGTATGGATAGCACGTAGTG+AGG + chr5.4:59024680-59024699 MS.gene26257:CDS 50.0%
CTCGCGCGTTCTATGTAGTT+TGG + chr5.4:59023021-59023040 MS.gene26257:intron 50.0%
CTGTTGTGGTTGCAAACCGA+AGG + chr5.4:59021975-59021994 MS.gene26257:CDS 50.0%
GAAATCAGCTAGGCGAGTTG+AGG - chr5.4:59024295-59024314 None:intergenic 50.0%
GAATAACGTTGGGGATCGAG+CGG - chr5.4:59021814-59021833 None:intergenic 50.0%
GAGAGACTGTGATGAGTCAG+TGG - chr5.4:59022438-59022457 None:intergenic 50.0%
GAGGCGACTGATGATTGTCA+TGG + chr5.4:59023813-59023832 MS.gene26257:intron 50.0%
! AGGCGAGTTGAGGAAATTCC+AGG - chr5.4:59024285-59024304 None:intergenic 50.0%
! CGGCCGCGATAAAAAGGTAT+AGG - chr5.4:59022633-59022652 None:intergenic 50.0%
! GCAATGCCTTTTCCTGTACG+AGG + chr5.4:59021656-59021675 MS.gene26257:CDS 50.0%
! TAGTGAGGCTTCCAGGTTGA+AGG + chr5.4:59024695-59024714 MS.gene26257:CDS 50.0%
!! CCAGTGTTGGTGGTAGTTGA+TGG - chr5.4:59023868-59023887 None:intergenic 50.0%
!! GAAAAGGCATTGCCACCATG+TGG - chr5.4:59021649-59021668 None:intergenic 50.0%
!! GGGTTGATATTGCCTCGTAC+AGG - chr5.4:59021671-59021690 None:intergenic 50.0%
!! GTGTTGGTGGTAGTTGATGG+TGG - chr5.4:59023865-59023884 None:intergenic 50.0%
!! TGGTGGTAGTTGATGGTGGT+CGG - chr5.4:59023861-59023880 None:intergenic 50.0%
!! TTTTATCGCGGCCGTTTTCG+CGG + chr5.4:59022639-59022658 MS.gene26257:intron 50.0%
AACTTCCCTCTGCCACATGG+TGG + chr5.4:59021634-59021653 MS.gene26257:CDS 55.0%
ACCAACTTCCCTCTGCCACA+TGG + chr5.4:59021631-59021650 MS.gene26257:CDS 55.0%
ACCATGTGGCAGAGGGAAGT+TGG - chr5.4:59021635-59021654 None:intergenic 55.0%
CATTGCCACCATGTGGCAGA+GGG - chr5.4:59021642-59021661 None:intergenic 55.0%
CCAACACTGGGGTTGCCAAA+TGG + chr5.4:59023878-59023897 MS.gene26257:intron 55.0%
CCATTTGGCAACCCCAGTGT+TGG - chr5.4:59023881-59023900 None:intergenic 55.0%
CGACTGCGGATCAGTTCAGA+GGG - chr5.4:59021836-59021855 None:intergenic 55.0%
TAGCACGTAGTGAGGCTTCC+AGG + chr5.4:59024688-59024707 MS.gene26257:CDS 55.0%
TAGGTGGACGGACACCCATT+TGG - chr5.4:59023896-59023915 None:intergenic 55.0%
TCGACACCACATAGCCCATC+CGG + chr5.4:59023205-59023224 MS.gene26257:intron 55.0%
TGGTGGTCATCAGATGGGAC+TGG + chr5.4:59024725-59024744 MS.gene26257:CDS 55.0%
TTTCCACAGCACAGGATGGC+CGG - chr5.4:59023227-59023246 None:intergenic 55.0%
! TTTGGCAACCCCAGTGTTGG+TGG - chr5.4:59023878-59023897 None:intergenic 55.0%
!! GGTAGTTGATGGTGGTCGGT+TGG - chr5.4:59023857-59023876 None:intergenic 55.0%
!! GTTGTTGGGTATTGGGTCGG+AGG - chr5.4:59021783-59021802 None:intergenic 55.0%
AACGGTCGCAGTCTCGGTCA+CGG + chr5.4:59022168-59022187 MS.gene26257:intron 60.0%
ACAGCACAGGATGGCCGGAT+GGG - chr5.4:59023222-59023241 None:intergenic 60.0%
CACTGCCGCATGTCCAAGAC+TGG + chr5.4:59023496-59023515 MS.gene26257:intron 60.0%
GCATTGCCACCATGTGGCAG+AGG - chr5.4:59021643-59021662 None:intergenic 60.0%
GCGACTGCGGATCAGTTCAG+AGG - chr5.4:59021837-59021856 None:intergenic 60.0%
TCGCGACCACCCTGCATTCA+TGG + chr5.4:59021853-59021872 MS.gene26257:CDS 60.0%
TCTCGGTCACGGTCGCGTTA+AGG + chr5.4:59022179-59022198 MS.gene26257:intron 60.0%
TGGATTCGAACCCATGGCCG+TGG + chr5.4:59023516-59023535 MS.gene26257:intron 60.0%
AGTTGCGCGCGGAGGAAACC+CGG - chr5.4:59023447-59023466 None:intergenic 65.0%
ATGCAGGGTGGTCGCGACTG+CGG - chr5.4:59021850-59021869 None:intergenic 65.0%
CACAGCACAGGATGGCCGGA+TGG - chr5.4:59023223-59023242 None:intergenic 65.0%
CATCCGGCCATCCTGTGCTG+TGG + chr5.4:59023221-59023240 MS.gene26257:intron 65.0%
GCTTACCGCACAGTTGCGCG+CGG - chr5.4:59023458-59023477 None:intergenic 65.0%
TTCCTCCGCGCGCAACTGTG+CGG + chr5.4:59023450-59023469 MS.gene26257:intron 65.0%
!! GGATGGCCGGATGGGCTATG+TGG - chr5.4:59023214-59023233 None:intergenic 65.0%
TACCGCACAGTTGCGCGCGG+AGG - chr5.4:59023455-59023474 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 59021620 59025145 59021620 ID=MS.gene26257
chr5.4 mRNA 59021620 59025145 59021620 ID=MS.gene26257.t1;Parent=MS.gene26257
chr5.4 exon 59021620 59022103 59021620 ID=MS.gene26257.t1.exon1;Parent=MS.gene26257.t1
chr5.4 CDS 59021620 59022103 59021620 ID=cds.MS.gene26257.t1;Parent=MS.gene26257.t1
chr5.4 exon 59024253 59025145 59024253 ID=MS.gene26257.t1.exon2;Parent=MS.gene26257.t1
chr5.4 CDS 59024253 59025145 59024253 ID=cds.MS.gene26257.t1;Parent=MS.gene26257.t1
Gene Sequence

>MS.gene26257

ATGGAAGCACAACCAACTTCCCTCTGCCACATGGTGGCAATGCCTTTTCCTGTACGAGGCAATATCAACCCTATGATGAACCTTTGCAAGCTTCTTGTCTCAAACAACAGCAACATCCATGTTACCTTTGTTGTTACTGAAGAATGGCTAAGCTTCATCTCCTCCGACCCAATACCCAACAACATAAGCTTCCGCTCGATCCCCAACGTTATTCCCTCTGAACTGATCCGCAGTCGCGACCACCCTGCATTCATGGAAGATGTCATGACAAAGATGGAAGCACCCTTTGAGGAGCTACTTGACCAACTTTATCACCCTCCTTCTATCATTGTTTATGATACTTTGTTGTATTGGGCTGTTGTGGTTGCAAACCGAAGGAATATTCCGGCAGCATTGTTTTGGCCTATGCCGACATCTATTTTCTCTGTGTTCCAACATCAACACCTTTTTGAACAAAATGGTCACTACCCCATGAAATATCCAGGTAACCAAATCCAATATTCCAATAATATTTAGTTGTTAAGGAAACCAAAAGCAAGGTTTTACATAACGGTCGCAGTCTCGGTCACGGTCGCGTTAAGGTTGTCGCGATTTCGGCTGTTACGTGTGTTGTGTTACATATTACGGTCGTCGCGGTGTGAATTAATCACAACAATGCACAAATATTATTAAATCGTTTATTCTATCATATAATATATAATAACTTAAATTGAACTATTATTTAATATTTTATAAGATGGTTGAAATAAATATAATAATTACAACTTTACAACACTATACAACACGAAAATAGGCGATGAAAGGATTATGAGATACCACTGACTCATCACAGTCTCTCATTATCTATTTTTCCTTTTGAACGGTGTTGTGTTTTTTGCTTTCGCAATGGTGTATCACATTCGTAACGGAGTTTTACGGTTGTATCGGCTTTTTGTCATGGTCGTAACAGGCGTTTCGATGTGATTTTTTATCTCACCCTGAAAAACAGGCAAAAACGCTATCAGTGGCTACCTATACCTTTTTATCGCGGCCGTTTTCGCGGATTTAAAACCTTGACCAAAAGTAGTAAGTTTGCATTTAATTCAATAATATTTTGACTTTTATAAGGTTTTCATCACTTTTCACCACTTCCCAATACAAATTTCTATTTTTATTCTCTTAATCAATGTCCTAACGACACTCTTTACCAATAATATTAGATATTTGTTGAATAAAATTTGTGTGAACACAAGGATATGGATACATTGTTCGAATACACGGTCATAAAAATACACATCATATGATTATTTAAAAAAATATATATCATTTAATTTTTTTTATGTGTGTGGGGTCTAAAAGTTATGTTCAAATGTTTCTCTCCATATAAAAATTAAACTTCTTCTTTTCCTACTCTATTGATTTCTCGCGCGTTCTATGTAGTTTGGATATATAAATTCGAACGACATAAACACACTGTAAAAACCTCCAAAACACGTTAAACATTTCACATTTTAAAATATGAATAGAGCGTACAAGAAATTCATAGGGTGAAGAAAATAATGGTCTAAAATGATTGTTAAAGTAACACAAAAACTGACTCTTTGCATCGACACCACATAGCCCATCCGGCCATCCTGTGCTGTGGAAATTGTGATAAAAATATGGTGTCACTATTGGGTTTTATGTTTGAGTCATTATAATTGAACACATCTATTTTCTCAGCACTTCATTTTCTCTCTATCTCTCTTATTATCACATCACATCCCTAACATATCATATCTATCATATTGTTCTTTCTATTTTTCTATTTCAAGATATAAAATAAATTTTTTTGTGTGGTGTAAACCGGGTTTCCTCCGCGCGCAACTGTGCGGTAAGCTCTTTCTAAGAGTTTCAACACTGCCGCATGTCCAAGACTGGATTCGAACCCATGGCCGTGGTTAAGTTAGAAGAGACTCGTGACATCTCATCTAAGCTCTATTGGATAGATACAAAATGAATTTGGGTGTACATAAAACATTTTTGTTTGTGTTCTAATATCATTTTTGATATCGTTATTGGGTAATTTTTTTATTACACCCCATATATGCGGGATACCGATTTGACTCCAAAAAAAATTATTTAATACATACAAATAATTTTATTTATTATTTGAATTTTGTTTTTTTTTAATTTTAAAAATTATCGATAACTTTTTAATACTTATAATGATGGGAGGCGACTGATGATTGTCATGGATCGTAAGAGCTCTGTTGCCAACCGACCACCATCAACTACCACCAACACTGGGGTTGCCAAATGGGTGTCCGTCCACCTATCATTACTCAATATTATTTCAAGCTATTGCGAATTAAACCATTAAATATAAATTATTGCAAGCTGATTCTAAATTTATATCTAATGTTTCTTCAATACACGGTATAAATATAGTGATTGCTCAATAAACCATTAAAATTGCTCAACAGATCAGGTAGTAATTTTCAATGAGCATTTTTTGTGAGTAAACCCCGATAGGATACTGAAATTGAAAGCAATCTGAGGTGCTTATTGGGCGATATTCACCTCACAATGTTGTAGATGATCTTAAATAAAAATGCATGGTTTTCTTATCTAATTGTGAAATTTTGTGATATTAACTAAATTGTGTATGACAGAGAATGGTGACAAACGTGTATGTTATATTCCTGGAATTTCCTCAACTCGCCTAGCTGATTTCGCTCTAAACGATGATAGTAGCCGAAGCAAACGAATGATGCAATATTTTTTGAAAGGTTTTGAATGGATTGACAAAGCACAATATCTTCTATTCTCTTCAATTTATGAGCTTGAATCTCAAGCCATTGATGTCTTAAAATCAAAATTGTCCTTGCCAATTTACACTATTGGCCCTACCATACCTAATTTTAGCCTTATTAAAAACAATCCAAAATCGAGTAACACTAATCATAGCTACTACATTGAGTGGCTTGATTCACAACCCATTGGTTCTGTTCTTTATATAGCACAAGGAAGTTTTTTCTCGGTTTCAAGTGCACAAATAGATGAGATTGTAGCTGCTTTGTGTTCAAACAATGTTTGGTTCGTATGGATAGCACGTAGTGAGGCTTCCAGGTTGAAGGAAATTTGTGGTGGTCATCAGATGGGACTGGTTTTGGAATGGTGTGACCAATTGAGAGTTTTGTCACATCCTTCTATTGGTGGATTTTGGTCTCATTGTGGTTGGAATTCAACAAAGGAAAGTCTTGTTGCTGGGGTTCCATTTTTGACTTCTCCAATATATATTGACCAACCATTTAATAGTAAGATGATAGTAGAGGATTGGAAAGTTGGATTGAGAGTGAAGGAAGATGTTAAGAGAGATACTTTGGTGAAGAAAGATGAAATAGTAAGGCTAGTGCATGAATTTATGGATTTGGATGGTGAGGTTACAAGAGATATTAGGGAAAGAAGCAAAAAACTTCAAAAGATATGTCTTAATGCAATCACAAATGGTGGCTCAGCTCATACCGATTTTAATGCCTTCATCAGTGATGTAATGCATTTGTAG
Protein sequence

>MS.gene26257.t1

MEAQPTSLCHMVAMPFPVRGNINPMMNLCKLLVSNNSNIHVTFVVTEEWLSFISSDPIPNNISFRSIPNVIPSELIRSRDHPAFMEDVMTKMEAPFEELLDQLYHPPSIIVYDTLLYWAVVVANRRNIPAALFWPMPTSIFSVFQHQHLFEQNGHYPMKYPENGDKRVCYIPGISSTRLADFALNDDSSRSKRMMQYFLKGFEWIDKAQYLLFSSIYELESQAIDVLKSKLSLPIYTIGPTIPNFSLIKNNPKSSNTNHSYYIEWLDSQPIGSVLYIAQGSFFSVSSAQIDEIVAALCSNNVWFVWIARSEASRLKEICGGHQMGLVLEWCDQLRVLSHPSIGGFWSHCGWNSTKESLVAGVPFLTSPIYIDQPFNSKMIVEDWKVGLRVKEDVKRDTLVKKDEIVRLVHEFMDLDGEVTRDIRERSKKLQKICLNAITNGGSAHTDFNAFISDVMHL