Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28355.t1 | KEH30301.1 | 96.2 | 504 | 19 | 0 | 1 | 504 | 11 | 514 | 8.40E-294 | 1018.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28355.t1 | P26204 | 80.9 | 487 | 87 | 4 | 1 | 481 | 7 | 493 | 1.9e-233 | 809.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28355.t1 | A0A072ULP4 | 96.2 | 504 | 19 | 0 | 1 | 504 | 11 | 514 | 6.1e-294 | 1018.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene28355 | 0.852678 | 3.94E-61 | -1.69E-46 |
| MS.gene049611 | MS.gene28355 | 0.817743 | 2.81E-52 | -1.69E-46 |
| MS.gene049634 | MS.gene28355 | 0.814214 | 1.73E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene28355 | 0.804459 | 2.14E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene28355 | -0.801951 | 7.07E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene28355 | -0.805248 | 1.46E-49 | -1.69E-46 |
| MS.gene05079 | MS.gene28355 | 0.815359 | 9.62E-52 | -1.69E-46 |
| MS.gene05104 | MS.gene28355 | 0.81034 | 1.21E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene28355 | 0.823998 | 1.02E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene28355 | 0.821419 | 4.08E-53 | -1.69E-46 |
| MS.gene051138 | MS.gene28355 | 0.843012 | 1.82E-58 | -1.69E-46 |
| MS.gene051364 | MS.gene28355 | 0.804956 | 1.68E-49 | -1.69E-46 |
| MS.gene051422 | MS.gene28355 | 0.806277 | 8.89E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene28355 | 0.800383 | 1.48E-48 | -1.69E-46 |
| MS.gene052211 | MS.gene28355 | 0.82255 | 2.23E-53 | -1.69E-46 |
| MS.gene05240 | MS.gene28355 | 0.83096 | 2.19E-55 | -1.69E-46 |
| MS.gene05244 | MS.gene28355 | 0.834596 | 2.74E-56 | -1.69E-46 |
| MS.gene052606 | MS.gene28355 | 0.820063 | 8.36E-53 | -1.69E-46 |
| MS.gene053031 | MS.gene28355 | 0.836746 | 7.81E-57 | -1.69E-46 |
| MS.gene053406 | MS.gene28355 | 0.810692 | 1.02E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene28355 | 0.850615 | 1.51E-60 | -1.69E-46 |
| MS.gene053887 | MS.gene28355 | 0.833413 | 5.41E-56 | -1.69E-46 |
| MS.gene054146 | MS.gene28355 | 0.821095 | 4.84E-53 | -1.69E-46 |
| MS.gene054181 | MS.gene28355 | 0.837104 | 6.33E-57 | -1.69E-46 |
| MS.gene054277 | MS.gene28355 | 0.804709 | 1.90E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene28355 | -0.811846 | 5.71E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene28355 | 0.813883 | 2.04E-51 | -1.69E-46 |
| MS.gene05483 | MS.gene28355 | 0.838962 | 2.10E-57 | -1.69E-46 |
| MS.gene055124 | MS.gene28355 | 0.804045 | 2.61E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene28355 | 0.806629 | 7.50E-50 | -1.69E-46 |
| MS.gene055240 | MS.gene28355 | 0.836184 | 1.09E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene28355 | -0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene28355 | -0.810423 | 1.16E-50 | -1.69E-46 |
| MS.gene055959 | MS.gene28355 | 0.804293 | 2.32E-49 | -1.69E-46 |
| MS.gene056224 | MS.gene28355 | 0.824303 | 8.68E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene28355 | -0.811819 | 5.78E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene28355 | 0.85311 | 2.97E-61 | -1.69E-46 |
| MS.gene056591 | MS.gene28355 | 0.851592 | 8.03E-61 | -1.69E-46 |
| MS.gene056697 | MS.gene28355 | 0.805221 | 1.48E-49 | -1.69E-46 |
| MS.gene056748 | MS.gene28355 | 0.855168 | 7.56E-62 | -1.69E-46 |
| MS.gene056856 | MS.gene28355 | 0.849067 | 4.10E-60 | -1.69E-46 |
| MS.gene056920 | MS.gene28355 | 0.80077 | 1.23E-48 | -1.69E-46 |
| MS.gene057261 | MS.gene28355 | 0.832899 | 7.26E-56 | -1.69E-46 |
| MS.gene057544 | MS.gene28355 | 0.820134 | 8.05E-53 | -1.69E-46 |
| MS.gene057768 | MS.gene28355 | 0.825689 | 4.09E-54 | -1.69E-46 |
| MS.gene058067 | MS.gene28355 | 0.803836 | 2.88E-49 | -1.69E-46 |
| MS.gene058068 | MS.gene28355 | 0.831063 | 2.06E-55 | -1.69E-46 |
| MS.gene058093 | MS.gene28355 | 0.801888 | 7.28E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene28355 | 0.841319 | 5.11E-58 | -1.69E-46 |
| MS.gene058109 | MS.gene28355 | 0.804759 | 1.85E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene28355 | 0.815002 | 1.16E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene28355 | 0.804802 | 1.81E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene28355 | 0.814785 | 1.29E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene28355 | -0.800415 | 1.46E-48 | -1.69E-46 |
| MS.gene058603 | MS.gene28355 | 0.834368 | 3.12E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene28355 | -0.801034 | 1.09E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene28355 | -0.800473 | 1.42E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene28355 | 0.831731 | 1.41E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene28355 | -0.801198 | 1.01E-48 | -1.69E-46 |
| MS.gene059953 | MS.gene28355 | 0.851235 | 1.01E-60 | -1.69E-46 |
| MS.gene059955 | MS.gene28355 | 0.864507 | 1.16E-64 | -1.69E-46 |
| MS.gene060405 | MS.gene28355 | 0.849298 | 3.54E-60 | -1.69E-46 |
| MS.gene060762 | MS.gene28355 | -0.812026 | 5.21E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene28355 | -0.801434 | 9.02E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28355.t1 | MTR_4g066640 | 96.230 | 504 | 19 | 0 | 1 | 504 | 11 | 514 | 0.0 | 1008 |
| MS.gene28355.t1 | MTR_4g066640 | 94.987 | 379 | 19 | 0 | 1 | 379 | 11 | 389 | 0.0 | 750 |
| MS.gene28355.t1 | MTR_4g066580 | 69.307 | 505 | 151 | 2 | 2 | 503 | 12 | 515 | 0.0 | 749 |
| MS.gene28355.t1 | MTR_3g028720 | 67.530 | 502 | 159 | 2 | 5 | 503 | 14 | 514 | 0.0 | 732 |
| MS.gene28355.t1 | MTR_2g098520 | 68.583 | 487 | 149 | 2 | 20 | 503 | 25 | 510 | 0.0 | 718 |
| MS.gene28355.t1 | MTR_4g066630 | 67.540 | 496 | 155 | 3 | 11 | 501 | 19 | 513 | 0.0 | 717 |
| MS.gene28355.t1 | MTR_4g066590 | 66.534 | 502 | 161 | 4 | 5 | 501 | 8 | 507 | 0.0 | 713 |
| MS.gene28355.t1 | MTR_2g098540 | 67.327 | 505 | 156 | 5 | 4 | 503 | 7 | 507 | 0.0 | 712 |
| MS.gene28355.t1 | MTR_2g098790 | 66.531 | 490 | 159 | 3 | 18 | 503 | 26 | 514 | 0.0 | 700 |
| MS.gene28355.t1 | MTR_6g078450 | 65.269 | 501 | 166 | 4 | 10 | 503 | 13 | 512 | 0.0 | 696 |
| MS.gene28355.t1 | MTR_6g078330 | 63.241 | 506 | 174 | 4 | 4 | 503 | 14 | 513 | 0.0 | 673 |
| MS.gene28355.t1 | MTR_4g066240 | 61.144 | 507 | 193 | 2 | 1 | 504 | 8 | 513 | 0.0 | 672 |
| MS.gene28355.t1 | MTR_2g098540 | 68.627 | 459 | 140 | 2 | 48 | 503 | 6 | 463 | 0.0 | 671 |
| MS.gene28355.t1 | MTR_4g066210 | 62.828 | 495 | 177 | 3 | 16 | 504 | 27 | 520 | 0.0 | 670 |
| MS.gene28355.t1 | MTR_4g066240 | 61.024 | 508 | 193 | 3 | 1 | 504 | 8 | 514 | 0.0 | 667 |
| MS.gene28355.t1 | MTR_4g066330 | 63.473 | 501 | 157 | 3 | 5 | 503 | 17 | 493 | 0.0 | 662 |
| MS.gene28355.t1 | MTR_3g028720 | 68.456 | 447 | 137 | 2 | 5 | 448 | 14 | 459 | 0.0 | 658 |
| MS.gene28355.t1 | MTR_6g078380 | 62.598 | 508 | 184 | 4 | 1 | 503 | 7 | 513 | 0.0 | 655 |
| MS.gene28355.t1 | MTR_4g066280 | 60.878 | 501 | 170 | 3 | 6 | 504 | 18 | 494 | 0.0 | 651 |
| MS.gene28355.t1 | MTR_4g066630 | 67.421 | 442 | 138 | 3 | 11 | 447 | 19 | 459 | 0.0 | 640 |
| MS.gene28355.t1 | MTR_5g071520 | 60.425 | 518 | 189 | 5 | 1 | 503 | 8 | 524 | 0.0 | 632 |
| MS.gene28355.t1 | MTR_4g066580 | 69.617 | 418 | 123 | 2 | 2 | 416 | 12 | 428 | 0.0 | 616 |
| MS.gene28355.t1 | MTR_6g078450 | 65.022 | 446 | 148 | 4 | 10 | 448 | 13 | 457 | 0.0 | 614 |
| MS.gene28355.t1 | MTR_3g028720 | 68.765 | 413 | 125 | 2 | 5 | 414 | 14 | 425 | 0.0 | 604 |
| MS.gene28355.t1 | MTR_4g066340 | 64.450 | 436 | 151 | 2 | 72 | 504 | 6 | 440 | 0.0 | 599 |
| MS.gene28355.t1 | MTR_4g066630 | 67.322 | 407 | 127 | 3 | 11 | 412 | 19 | 424 | 0.0 | 587 |
| MS.gene28355.t1 | MTR_3g026280 | 57.620 | 479 | 194 | 4 | 28 | 503 | 21 | 493 | 0.0 | 574 |
| MS.gene28355.t1 | MTR_6g078330 | 65.122 | 410 | 139 | 2 | 97 | 503 | 1 | 409 | 0.0 | 573 |
| MS.gene28355.t1 | MTR_4g015420 | 56.088 | 501 | 182 | 8 | 15 | 503 | 51 | 525 | 0.0 | 565 |
| MS.gene28355.t1 | MTR_4g067040 | 66.751 | 394 | 127 | 2 | 10 | 400 | 15 | 407 | 0.0 | 563 |
| MS.gene28355.t1 | MTR_4g023000 | 55.230 | 478 | 206 | 4 | 28 | 503 | 23 | 494 | 0.0 | 559 |
| MS.gene28355.t1 | MTR_3g026400 | 53.846 | 507 | 225 | 6 | 1 | 503 | 8 | 509 | 0.0 | 542 |
| MS.gene28355.t1 | MTR_2g043200 | 55.882 | 476 | 178 | 7 | 34 | 503 | 70 | 519 | 0.0 | 542 |
| MS.gene28355.t1 | MTR_3g028720 | 67.105 | 380 | 121 | 2 | 5 | 381 | 14 | 392 | 0.0 | 542 |
| MS.gene28355.t1 | MTR_4g066240 | 60.000 | 415 | 162 | 2 | 1 | 412 | 8 | 421 | 0.0 | 541 |
| MS.gene28355.t1 | MTR_6g078330 | 61.800 | 411 | 151 | 3 | 96 | 503 | 2 | 409 | 0.0 | 541 |
| MS.gene28355.t1 | MTR_4g015460 | 54.902 | 510 | 193 | 9 | 6 | 504 | 19 | 502 | 0.0 | 540 |
| MS.gene28355.t1 | MTR_4g067040 | 67.480 | 369 | 116 | 2 | 10 | 375 | 15 | 382 | 0.0 | 533 |
| MS.gene28355.t1 | MTR_4g083000 | 51.367 | 512 | 223 | 8 | 2 | 502 | 6 | 502 | 0.0 | 524 |
| MS.gene28355.t1 | MTR_3g026400 | 55.652 | 460 | 198 | 4 | 46 | 503 | 23 | 478 | 0.0 | 518 |
| MS.gene28355.t1 | MTR_4g066630 | 66.758 | 364 | 115 | 3 | 11 | 369 | 19 | 381 | 0.0 | 516 |
| MS.gene28355.t1 | MTR_3g026620 | 54.280 | 479 | 213 | 4 | 27 | 503 | 36 | 510 | 2.44e-180 | 516 |
| MS.gene28355.t1 | MTR_5g044000 | 49.336 | 527 | 224 | 9 | 7 | 501 | 5 | 520 | 1.87e-175 | 504 |
| MS.gene28355.t1 | MTR_6g078330 | 62.873 | 369 | 125 | 4 | 4 | 366 | 14 | 376 | 5.57e-168 | 479 |
| MS.gene28355.t1 | MTR_4g081530 | 48.047 | 512 | 242 | 8 | 2 | 502 | 1 | 499 | 3.97e-165 | 477 |
| MS.gene28355.t1 | MTR_0110s0040 | 48.718 | 507 | 247 | 8 | 1 | 503 | 15 | 512 | 1.74e-164 | 476 |
| MS.gene28355.t1 | MTR_0110s0030 | 47.327 | 505 | 257 | 6 | 1 | 503 | 15 | 512 | 1.69e-161 | 468 |
| MS.gene28355.t1 | MTR_3g033810 | 46.960 | 477 | 242 | 5 | 26 | 502 | 18 | 483 | 3.48e-155 | 451 |
| MS.gene28355.t1 | MTR_3g033790 | 46.624 | 474 | 241 | 6 | 29 | 502 | 19 | 480 | 1.50e-152 | 444 |
| MS.gene28355.t1 | MTR_4g131810 | 45.436 | 493 | 250 | 6 | 15 | 501 | 24 | 503 | 2.78e-150 | 440 |
| MS.gene28355.t1 | MTR_2g022760 | 46.751 | 477 | 247 | 5 | 32 | 504 | 39 | 512 | 2.93e-149 | 437 |
| MS.gene28355.t1 | MTR_4g083000 | 51.319 | 417 | 183 | 5 | 97 | 502 | 1 | 408 | 5.09e-146 | 425 |
| MS.gene28355.t1 | MTR_4g131800 | 48.000 | 475 | 239 | 6 | 34 | 504 | 521 | 991 | 3.25e-144 | 440 |
| MS.gene28355.t1 | MTR_2g022710 | 45.963 | 483 | 249 | 7 | 28 | 504 | 34 | 510 | 1.15e-141 | 417 |
| MS.gene28355.t1 | MTR_5g068740 | 44.685 | 508 | 249 | 11 | 3 | 502 | 6 | 489 | 7.94e-141 | 415 |
| MS.gene28355.t1 | MTR_7g068910 | 44.398 | 482 | 246 | 8 | 28 | 503 | 30 | 495 | 2.29e-140 | 414 |
| MS.gene28355.t1 | MTR_3g026400 | 56.216 | 370 | 153 | 6 | 1 | 366 | 8 | 372 | 6.62e-140 | 408 |
| MS.gene28355.t1 | MTR_2g079550 | 43.585 | 491 | 261 | 8 | 18 | 501 | 20 | 501 | 2.37e-139 | 412 |
| MS.gene28355.t1 | MTR_7g033860 | 44.306 | 483 | 242 | 8 | 31 | 504 | 50 | 514 | 2.44e-139 | 411 |
| MS.gene28355.t1 | MTR_2g079580 | 43.177 | 491 | 263 | 8 | 18 | 501 | 22 | 503 | 6.78e-139 | 411 |
| MS.gene28355.t1 | MTR_1g088610 | 45.079 | 508 | 246 | 10 | 3 | 502 | 6 | 488 | 3.47e-138 | 413 |
| MS.gene28355.t1 | MTR_1g088610 | 40.171 | 117 | 63 | 2 | 387 | 502 | 503 | 613 | 1.59e-17 | 86.3 |
| MS.gene28355.t1 | MTR_7g068910 | 43.496 | 492 | 246 | 9 | 28 | 503 | 30 | 505 | 5.83e-137 | 406 |
| MS.gene28355.t1 | MTR_0108s0030 | 43.249 | 474 | 242 | 4 | 31 | 504 | 5 | 451 | 2.67e-136 | 402 |
| MS.gene28355.t1 | MTR_4g016920 | 45.094 | 479 | 241 | 9 | 29 | 501 | 27 | 489 | 4.55e-134 | 398 |
| MS.gene28355.t1 | MTR_7g051650 | 43.882 | 474 | 247 | 6 | 30 | 501 | 76 | 532 | 3.39e-123 | 371 |
| MS.gene28355.t1 | MTR_7g051510 | 43.396 | 477 | 250 | 7 | 30 | 504 | 76 | 534 | 6.92e-123 | 370 |
| MS.gene28355.t1 | MTR_7g051650 | 43.460 | 474 | 245 | 6 | 30 | 501 | 76 | 528 | 1.17e-121 | 367 |
| MS.gene28355.t1 | MTR_7g051610 | 43.277 | 476 | 252 | 5 | 30 | 504 | 76 | 534 | 1.29e-121 | 367 |
| MS.gene28355.t1 | MTR_0110s0040 | 50.824 | 364 | 169 | 6 | 1 | 360 | 15 | 372 | 3.34e-121 | 361 |
| MS.gene28355.t1 | MTR_2g022760 | 45.874 | 412 | 216 | 5 | 97 | 504 | 1 | 409 | 6.99e-121 | 361 |
| MS.gene28355.t1 | MTR_2g022710 | 45.433 | 427 | 222 | 6 | 28 | 448 | 34 | 455 | 8.44e-121 | 362 |
| MS.gene28355.t1 | MTR_2g022710 | 45.433 | 427 | 222 | 6 | 28 | 448 | 34 | 455 | 1.44e-120 | 362 |
| MS.gene28355.t1 | MTR_1g088630 | 44.156 | 462 | 208 | 10 | 48 | 502 | 14 | 432 | 8.39e-119 | 357 |
| MS.gene28355.t1 | MTR_2g022710 | 47.826 | 391 | 193 | 6 | 28 | 412 | 34 | 419 | 2.40e-118 | 354 |
| MS.gene28355.t1 | MTR_2g079580 | 45.274 | 402 | 205 | 7 | 18 | 412 | 22 | 415 | 2.71e-117 | 352 |
| MS.gene28355.t1 | MTR_2g022710 | 47.230 | 379 | 189 | 6 | 28 | 400 | 34 | 407 | 2.52e-112 | 338 |
| MS.gene28355.t1 | MTR_7g068900 | 43.602 | 422 | 208 | 9 | 92 | 502 | 17 | 419 | 3.31e-112 | 341 |
| MS.gene28355.t1 | MTR_2g022710 | 43.720 | 414 | 222 | 6 | 97 | 504 | 1 | 409 | 5.95e-112 | 338 |
| MS.gene28355.t1 | MTR_4g016920 | 44.282 | 411 | 208 | 8 | 97 | 501 | 1 | 396 | 2.95e-108 | 329 |
| MS.gene28355.t1 | MTR_2g022710 | 48.305 | 354 | 172 | 6 | 28 | 375 | 34 | 382 | 1.66e-104 | 319 |
| MS.gene28355.t1 | MTR_1g088630 | 51.104 | 317 | 121 | 5 | 28 | 340 | 26 | 312 | 9.88e-104 | 315 |
| MS.gene28355.t1 | MTR_7g056747 | 41.928 | 415 | 217 | 6 | 91 | 504 | 9 | 400 | 1.91e-98 | 303 |
| MS.gene28355.t1 | MTR_1g088630 | 52.593 | 270 | 118 | 4 | 28 | 293 | 26 | 289 | 9.79e-93 | 285 |
| MS.gene28355.t1 | MTR_4g016920 | 52.988 | 251 | 112 | 3 | 97 | 344 | 1 | 248 | 2.33e-86 | 268 |
| MS.gene28355.t1 | MTR_0110s0020 | 48.134 | 268 | 134 | 3 | 1 | 266 | 15 | 279 | 5.16e-85 | 265 |
| MS.gene28355.t1 | MTR_5g069350 | 40.462 | 173 | 62 | 5 | 341 | 503 | 48 | 189 | 3.20e-28 | 111 |
| MS.gene28355.t1 | MTR_4g122980 | 25.754 | 431 | 238 | 13 | 70 | 493 | 169 | 524 | 2.55e-24 | 107 |
| MS.gene28355.t1 | MTR_8g038650 | 45.833 | 96 | 51 | 1 | 253 | 348 | 58 | 152 | 1.02e-19 | 86.7 |
| MS.gene28355.t1 | MTR_8g038650 | 50.000 | 54 | 26 | 1 | 38 | 91 | 7 | 59 | 3.46e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28355.t1 | AT5G44640 | 54.314 | 510 | 216 | 7 | 2 | 504 | 8 | 507 | 0.0 | 564 |
| MS.gene28355.t1 | AT5G42260 | 54.691 | 501 | 212 | 7 | 1 | 497 | 8 | 497 | 0.0 | 556 |
| MS.gene28355.t1 | AT2G44450 | 55.165 | 484 | 204 | 5 | 21 | 501 | 27 | 500 | 0.0 | 553 |
| MS.gene28355.t1 | AT2G44480 | 54.412 | 476 | 214 | 2 | 28 | 501 | 34 | 508 | 0.0 | 543 |
| MS.gene28355.t1 | AT2G44480 | 54.412 | 476 | 214 | 2 | 28 | 501 | 65 | 539 | 0.0 | 543 |
| MS.gene28355.t1 | AT3G60130 | 53.556 | 478 | 212 | 5 | 29 | 502 | 30 | 501 | 0.0 | 526 |
| MS.gene28355.t1 | AT2G25630 | 53.402 | 485 | 195 | 7 | 21 | 501 | 26 | 483 | 0.0 | 518 |
| MS.gene28355.t1 | AT1G26560 | 53.112 | 482 | 216 | 6 | 26 | 501 | 29 | 506 | 8.18e-177 | 507 |
| MS.gene28355.t1 | AT5G24550 | 48.330 | 509 | 256 | 5 | 2 | 504 | 5 | 512 | 4.90e-175 | 503 |
| MS.gene28355.t1 | AT3G60140 | 48.660 | 485 | 235 | 5 | 29 | 504 | 26 | 505 | 6.55e-172 | 497 |
| MS.gene28355.t1 | AT3G60120 | 50.728 | 481 | 230 | 5 | 28 | 503 | 13 | 491 | 1.26e-171 | 495 |
| MS.gene28355.t1 | AT3G18080 | 51.235 | 486 | 223 | 8 | 24 | 504 | 34 | 510 | 1.38e-171 | 494 |
| MS.gene28355.t1 | AT5G54570 | 49.897 | 485 | 224 | 6 | 28 | 501 | 29 | 505 | 2.43e-170 | 491 |
| MS.gene28355.t1 | AT5G24540 | 50.204 | 490 | 221 | 6 | 29 | 504 | 32 | 512 | 5.69e-169 | 488 |
| MS.gene28355.t1 | AT1G51470 | 49.053 | 475 | 234 | 5 | 29 | 503 | 45 | 511 | 3.51e-168 | 485 |
| MS.gene28355.t1 | AT2G44490 | 49.687 | 479 | 233 | 5 | 31 | 502 | 16 | 493 | 2.02e-167 | 485 |
| MS.gene28355.t1 | AT1G47600 | 49.057 | 477 | 231 | 6 | 29 | 503 | 45 | 511 | 2.85e-166 | 480 |
| MS.gene28355.t1 | AT1G47600 | 48.847 | 477 | 231 | 6 | 29 | 503 | 45 | 510 | 6.66e-166 | 479 |
| MS.gene28355.t1 | AT2G44460 | 47.151 | 509 | 253 | 7 | 2 | 501 | 3 | 504 | 2.50e-163 | 475 |
| MS.gene28355.t1 | AT3G18070 | 48.466 | 489 | 230 | 9 | 21 | 504 | 22 | 493 | 6.59e-163 | 471 |
| MS.gene28355.t1 | AT3G18070 | 48.671 | 489 | 235 | 9 | 21 | 504 | 22 | 499 | 1.22e-161 | 468 |
| MS.gene28355.t1 | AT2G44470 | 46.217 | 489 | 257 | 4 | 20 | 503 | 20 | 507 | 6.35e-161 | 469 |
| MS.gene28355.t1 | AT2G44480 | 52.826 | 407 | 189 | 2 | 97 | 501 | 1 | 406 | 5.02e-158 | 456 |
| MS.gene28355.t1 | AT2G32860 | 48.017 | 479 | 241 | 5 | 29 | 501 | 94 | 570 | 6.04e-156 | 457 |
| MS.gene28355.t1 | AT3G60130 | 53.125 | 416 | 185 | 5 | 91 | 502 | 40 | 449 | 9.82e-156 | 451 |
| MS.gene28355.t1 | AT5G25980 | 46.484 | 512 | 257 | 11 | 1 | 502 | 19 | 523 | 6.79e-155 | 452 |
| MS.gene28355.t1 | AT2G32860 | 47.490 | 478 | 246 | 3 | 29 | 501 | 94 | 571 | 7.30e-155 | 455 |
| MS.gene28355.t1 | AT3G09260 | 46.458 | 480 | 250 | 5 | 29 | 503 | 35 | 512 | 2.76e-154 | 450 |
| MS.gene28355.t1 | AT1G75940 | 46.307 | 501 | 255 | 8 | 11 | 501 | 21 | 517 | 1.44e-153 | 449 |
| MS.gene28355.t1 | AT5G36890 | 46.835 | 474 | 239 | 6 | 31 | 502 | 18 | 480 | 4.97e-152 | 443 |
| MS.gene28355.t1 | AT5G36890 | 46.835 | 474 | 239 | 6 | 31 | 502 | 18 | 480 | 5.35e-152 | 443 |
| MS.gene28355.t1 | AT5G54570 | 50.116 | 431 | 197 | 5 | 28 | 448 | 29 | 451 | 5.44e-151 | 439 |
| MS.gene28355.t1 | AT3G03640 | 44.706 | 510 | 270 | 7 | 2 | 503 | 9 | 514 | 4.85e-150 | 439 |
| MS.gene28355.t1 | AT1G66280 | 45.000 | 500 | 263 | 7 | 10 | 501 | 15 | 510 | 5.35e-149 | 437 |
| MS.gene28355.t1 | AT1G66270 | 44.779 | 498 | 259 | 7 | 18 | 503 | 19 | 512 | 7.24e-148 | 434 |
| MS.gene28355.t1 | AT3G60130 | 51.923 | 416 | 179 | 6 | 91 | 502 | 40 | 438 | 1.86e-147 | 430 |
| MS.gene28355.t1 | AT3G21370 | 45.267 | 486 | 248 | 8 | 29 | 502 | 33 | 512 | 6.99e-147 | 431 |
| MS.gene28355.t1 | AT1G02850 | 47.107 | 484 | 221 | 10 | 30 | 502 | 27 | 486 | 2.64e-146 | 429 |
| MS.gene28355.t1 | AT1G52400 | 46.377 | 483 | 245 | 8 | 29 | 502 | 39 | 516 | 2.80e-146 | 430 |
| MS.gene28355.t1 | AT1G52400 | 46.377 | 483 | 245 | 8 | 29 | 502 | 39 | 516 | 2.80e-146 | 430 |
| MS.gene28355.t1 | AT5G28510 | 44.106 | 492 | 263 | 5 | 20 | 501 | 30 | 519 | 4.05e-146 | 429 |
| MS.gene28355.t1 | AT5G24540 | 49.769 | 432 | 195 | 5 | 29 | 447 | 32 | 454 | 7.50e-146 | 426 |
| MS.gene28355.t1 | AT5G26000 | 47.808 | 479 | 231 | 10 | 33 | 501 | 42 | 511 | 4.15e-145 | 427 |
| MS.gene28355.t1 | AT1G66270 | 44.378 | 498 | 259 | 8 | 18 | 503 | 19 | 510 | 2.65e-144 | 424 |
| MS.gene28355.t1 | AT2G44470 | 46.528 | 432 | 226 | 3 | 20 | 447 | 20 | 450 | 9.76e-142 | 416 |
| MS.gene28355.t1 | AT1G02850 | 45.168 | 507 | 220 | 11 | 30 | 502 | 27 | 509 | 1.40e-141 | 417 |
| MS.gene28355.t1 | AT1G61820 | 45.397 | 478 | 253 | 7 | 32 | 504 | 33 | 507 | 3.26e-140 | 414 |
| MS.gene28355.t1 | AT1G02850 | 45.276 | 508 | 219 | 12 | 30 | 502 | 27 | 510 | 5.72e-140 | 413 |
| MS.gene28355.t1 | AT5G25980 | 46.491 | 456 | 229 | 9 | 1 | 448 | 19 | 467 | 1.67e-139 | 410 |
| MS.gene28355.t1 | AT5G25980 | 46.491 | 456 | 229 | 9 | 1 | 448 | 19 | 467 | 1.67e-139 | 410 |
| MS.gene28355.t1 | AT3G60140 | 48.615 | 397 | 191 | 4 | 28 | 416 | 25 | 416 | 1.22e-138 | 408 |
| MS.gene28355.t1 | AT4G27830 | 44.099 | 483 | 247 | 8 | 25 | 501 | 19 | 484 | 7.17e-138 | 407 |
| MS.gene28355.t1 | AT1G60090 | 43.590 | 507 | 254 | 12 | 1 | 502 | 4 | 483 | 4.03e-137 | 405 |
| MS.gene28355.t1 | AT4G27820 | 45.833 | 480 | 233 | 9 | 29 | 501 | 23 | 482 | 9.58e-137 | 405 |
| MS.gene28355.t1 | AT4G22100 | 44.259 | 479 | 245 | 8 | 31 | 504 | 24 | 485 | 4.01e-136 | 403 |
| MS.gene28355.t1 | AT1G02850 | 45.248 | 484 | 203 | 10 | 30 | 502 | 27 | 459 | 6.88e-135 | 399 |
| MS.gene28355.t1 | AT5G54570 | 47.596 | 416 | 199 | 6 | 97 | 501 | 1 | 408 | 2.00e-134 | 396 |
| MS.gene28355.t1 | AT1G60090 | 42.969 | 512 | 257 | 13 | 1 | 502 | 4 | 490 | 2.04e-134 | 399 |
| MS.gene28355.t1 | AT2G44450 | 53.521 | 355 | 156 | 4 | 150 | 501 | 1 | 349 | 3.84e-134 | 392 |
| MS.gene28355.t1 | AT1G45191 | 44.538 | 476 | 240 | 8 | 30 | 502 | 30 | 484 | 3.01e-133 | 395 |
| MS.gene28355.t1 | AT4G21760 | 42.857 | 476 | 251 | 8 | 34 | 501 | 59 | 521 | 1.66e-132 | 395 |
| MS.gene28355.t1 | AT1G45191 | 43.724 | 478 | 247 | 8 | 30 | 502 | 30 | 490 | 1.31e-131 | 392 |
| MS.gene28355.t1 | AT1G61810 | 44.075 | 481 | 261 | 7 | 29 | 504 | 33 | 510 | 3.27e-130 | 388 |
| MS.gene28355.t1 | AT1G45191 | 43.505 | 485 | 243 | 9 | 30 | 502 | 30 | 495 | 3.32e-130 | 388 |
| MS.gene28355.t1 | AT5G26000 | 47.877 | 424 | 204 | 8 | 33 | 448 | 42 | 456 | 5.63e-130 | 385 |
| MS.gene28355.t1 | AT2G44480 | 58.654 | 312 | 125 | 3 | 28 | 337 | 65 | 374 | 8.40e-130 | 383 |
| MS.gene28355.t1 | AT1G52400 | 46.495 | 428 | 216 | 7 | 28 | 447 | 38 | 460 | 1.88e-127 | 379 |
| MS.gene28355.t1 | AT1G45191 | 42.886 | 492 | 248 | 10 | 30 | 502 | 30 | 507 | 2.76e-127 | 381 |
| MS.gene28355.t1 | AT4G21760 | 42.227 | 476 | 244 | 9 | 34 | 501 | 59 | 511 | 3.74e-127 | 381 |
| MS.gene28355.t1 | AT3G62750 | 41.458 | 480 | 251 | 10 | 26 | 501 | 20 | 473 | 3.06e-125 | 375 |
| MS.gene28355.t1 | AT3G62750 | 41.458 | 480 | 251 | 10 | 26 | 501 | 46 | 499 | 7.54e-125 | 375 |
| MS.gene28355.t1 | AT1G61810 | 43.871 | 465 | 253 | 7 | 29 | 488 | 33 | 494 | 5.06e-123 | 371 |
| MS.gene28355.t1 | AT2G44470 | 46.400 | 375 | 196 | 3 | 21 | 391 | 21 | 394 | 7.22e-121 | 360 |
| MS.gene28355.t1 | AT3G62740 | 40.041 | 487 | 269 | 9 | 18 | 501 | 12 | 478 | 4.06e-119 | 359 |
| MS.gene28355.t1 | AT1G02850 | 46.394 | 416 | 172 | 9 | 30 | 412 | 27 | 424 | 9.87e-118 | 353 |
| MS.gene28355.t1 | AT5G48375 | 44.218 | 441 | 170 | 11 | 29 | 463 | 38 | 408 | 1.40e-115 | 348 |
| MS.gene28355.t1 | AT3G18070 | 51.682 | 327 | 150 | 5 | 21 | 345 | 22 | 342 | 3.51e-113 | 340 |
| MS.gene28355.t1 | AT1G60270 | 46.791 | 374 | 183 | 7 | 1 | 370 | 1 | 362 | 9.31e-112 | 336 |
| MS.gene28355.t1 | AT4G27830 | 43.066 | 411 | 213 | 7 | 97 | 501 | 1 | 396 | 4.09e-110 | 333 |
| MS.gene28355.t1 | AT4G27820 | 44.417 | 412 | 207 | 8 | 97 | 501 | 1 | 397 | 4.16e-108 | 328 |
| MS.gene28355.t1 | AT4G27820 | 44.417 | 412 | 207 | 8 | 97 | 501 | 1 | 397 | 4.16e-108 | 328 |
| MS.gene28355.t1 | AT2G44460 | 47.107 | 363 | 178 | 5 | 148 | 501 | 1 | 358 | 2.15e-107 | 327 |
| MS.gene28355.t1 | AT3G62750 | 40.553 | 434 | 229 | 9 | 26 | 456 | 46 | 453 | 1.11e-106 | 326 |
| MS.gene28355.t1 | AT1G51490 | 47.246 | 345 | 171 | 5 | 36 | 379 | 27 | 361 | 1.57e-105 | 321 |
| MS.gene28355.t1 | AT1G45191 | 47.761 | 335 | 163 | 5 | 30 | 360 | 30 | 356 | 1.88e-105 | 321 |
| MS.gene28355.t1 | AT1G45191 | 47.761 | 335 | 163 | 5 | 30 | 360 | 30 | 356 | 1.93e-105 | 321 |
| MS.gene28355.t1 | AT1G61810 | 43.627 | 408 | 222 | 7 | 102 | 504 | 6 | 410 | 1.81e-104 | 319 |
| MS.gene28355.t1 | AT1G61810 | 44.473 | 389 | 209 | 6 | 29 | 412 | 33 | 419 | 1.04e-103 | 317 |
| MS.gene28355.t1 | AT3G62740 | 39.815 | 432 | 238 | 8 | 18 | 447 | 12 | 423 | 6.07e-102 | 313 |
| MS.gene28355.t1 | AT3G18070 | 47.720 | 329 | 161 | 6 | 181 | 504 | 100 | 422 | 1.44e-100 | 309 |
| MS.gene28355.t1 | AT3G18070 | 54.930 | 71 | 31 | 1 | 21 | 91 | 22 | 91 | 8.52e-18 | 85.9 |
| MS.gene28355.t1 | AT2G44480 | 48.515 | 303 | 153 | 2 | 201 | 501 | 1 | 302 | 3.99e-99 | 301 |
| MS.gene28355.t1 | AT3G62750 | 43.860 | 342 | 172 | 6 | 26 | 367 | 20 | 341 | 5.97e-98 | 300 |
| MS.gene28355.t1 | AT3G62750 | 43.860 | 342 | 172 | 6 | 26 | 367 | 20 | 341 | 5.97e-98 | 300 |
| MS.gene28355.t1 | AT3G62750 | 39.853 | 409 | 221 | 9 | 97 | 501 | 1 | 388 | 3.08e-97 | 300 |
| MS.gene28355.t1 | AT3G62750 | 39.853 | 409 | 221 | 9 | 97 | 501 | 1 | 388 | 3.08e-97 | 300 |
| MS.gene28355.t1 | AT3G62750 | 43.860 | 342 | 172 | 6 | 26 | 367 | 46 | 367 | 8.34e-97 | 300 |
| MS.gene28355.t1 | AT1G61820 | 43.324 | 367 | 201 | 6 | 143 | 504 | 4 | 368 | 2.40e-95 | 294 |
| MS.gene28355.t1 | AT3G18070 | 47.152 | 316 | 156 | 6 | 194 | 504 | 1 | 310 | 4.71e-95 | 291 |
| MS.gene28355.t1 | AT1G61810 | 50.562 | 267 | 128 | 3 | 32 | 296 | 36 | 300 | 2.04e-86 | 268 |
| MS.gene28355.t1 | AT1G60270 | 47.482 | 278 | 139 | 4 | 97 | 370 | 1 | 275 | 5.84e-82 | 256 |
| MS.gene28355.t1 | AT3G18070 | 47.699 | 239 | 117 | 4 | 181 | 414 | 100 | 335 | 1.61e-68 | 223 |
| MS.gene28355.t1 | AT3G18070 | 54.930 | 71 | 31 | 1 | 21 | 91 | 22 | 91 | 4.56e-18 | 85.9 |
| MS.gene28355.t1 | AT3G18070 | 46.903 | 226 | 112 | 4 | 194 | 414 | 1 | 223 | 5.71e-63 | 205 |
| MS.gene28355.t1 | AT5G16580 | 38.811 | 286 | 160 | 4 | 175 | 458 | 27 | 299 | 2.16e-52 | 180 |
| MS.gene28355.t1 | AT3G06510 | 25.714 | 420 | 235 | 14 | 92 | 502 | 159 | 510 | 4.95e-26 | 112 |
| MS.gene28355.t1 | AT3G06510 | 25.173 | 433 | 255 | 13 | 92 | 502 | 159 | 544 | 2.60e-24 | 107 |
Find 110 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGTTAATTTCAGGTTTA+TGG | 0.066072 | 4.2:+38842947 | MS.gene28355:intron |
| TTTCCACGTGGCTTCATCTT+TGG | 0.183969 | 4.2:+38836562 | MS.gene28355:CDS |
| TGATTATGTGTAACTATATA+AGG | 0.212347 | 4.2:-38840493 | None:intergenic |
| TTCCACGTGGCTTCATCTTT+GGG | 0.217307 | 4.2:+38836563 | MS.gene28355:CDS |
| ACATGTTTGGGTGGTAATTC+TGG | 0.227903 | 4.2:+38840463 | MS.gene28355:CDS |
| ACAATTGCAGTTGAACAAAA+TGG | 0.236440 | 4.2:+38843285 | MS.gene28355:intron |
| GACTTACTTGGGAGTATTCT+TGG | 0.244929 | 4.2:-38839848 | None:intergenic |
| AGATCACTTGACTTCCAATT+TGG | 0.245781 | 4.2:+38840770 | MS.gene28355:CDS |
| ATATATAGGCTGCTTCAATT+TGG | 0.265595 | 4.2:+38843481 | MS.gene28355:intron |
| TTCTGTAGAAGAAGCTCTTT+TGG | 0.269060 | 4.2:+38843792 | MS.gene28355:CDS |
| TAATTAATTACCATCCAAAT+TGG | 0.278065 | 4.2:-38840784 | None:intergenic |
| CATTGCCTTGTGGAGGTAAA+TGG | 0.282756 | 4.2:-38843115 | None:intergenic |
| GCATAACATTGGTAACAAAT+TGG | 0.283831 | 4.2:+38840699 | MS.gene28355:CDS |
| GACTGTAATGAATGGTTTGC+AGG | 0.311829 | 4.2:+38844074 | MS.gene28355:CDS |
| GCAGGCTTTACTGTTCGTTT+TGG | 0.320577 | 4.2:+38844092 | MS.gene28355:CDS |
| GTGGTAGAGGACCAAGTATC+TGG | 0.325786 | 4.2:+38837184 | MS.gene28355:CDS |
| ATGTTCTAGCCCAACATGTT+TGG | 0.329686 | 4.2:+38840450 | MS.gene28355:CDS |
| GATTATGAAGGATCAGAATA+TGG | 0.342816 | 4.2:+38839799 | MS.gene28355:CDS |
| GTGGTCTACATTACTGAAAA+TGG | 0.345716 | 4.2:+38843570 | MS.gene28355:CDS |
| GATCTTTGCTTCAAGGAATT+CGG | 0.349501 | 4.2:+38840340 | MS.gene28355:CDS |
| TACCATTGAGCAGAAAGCTT+TGG | 0.350960 | 4.2:-38844155 | None:intergenic |
| CTATGCTGATCTTTGCTTCA+AGG | 0.368377 | 4.2:+38840333 | MS.gene28355:CDS |
| TGTTCTAGCCCAACATGTTT+GGG | 0.369906 | 4.2:+38840451 | MS.gene28355:CDS |
| GGATAATCTCCGGTTGTTAG+AGG | 0.377413 | 4.2:-38842972 | None:intergenic |
| ACCATTGAGCAGAAAGCTTT+GGG | 0.379817 | 4.2:-38844154 | None:intergenic |
| GCATATCAAAAGGGCAAGAT+AGG | 0.386935 | 4.2:+38840677 | MS.gene28355:CDS |
| AACTTTGTAGATTACAATGA+TGG | 0.387322 | 4.2:+38844119 | MS.gene28355:CDS |
| TGACCAATACCATCGCTATA+AGG | 0.400152 | 4.2:+38838610 | MS.gene28355:CDS |
| AAAAGATCTCGAAGTCCTCT+TGG | 0.415218 | 4.2:-38843516 | None:intergenic |
| CGTGGCTTCATCTTTGGGGC+GGG | 0.423208 | 4.2:+38836568 | MS.gene28355:CDS |
| TCGGAGATAGAGTGAAGTAC+TGG | 0.425135 | 4.2:+38840359 | MS.gene28355:CDS |
| ATACTCGTCTTCTAAGACTT+GGG | 0.426002 | 4.2:-38840190 | None:intergenic |
| TGTGTATAAGATCAATTATC+AGG | 0.433730 | 4.2:+38840543 | MS.gene28355:CDS |
| CAACCTCATCAACGAATTGT+TGG | 0.435996 | 4.2:+38840010 | MS.gene28355:CDS |
| AAGTGTGCAGGCATATCAAA+AGG | 0.439406 | 4.2:+38840667 | MS.gene28355:intron |
| ATCAACGAATTGTTGGCTAA+TGG | 0.451216 | 4.2:+38840017 | MS.gene28355:CDS |
| CAATAGCATACCCGATCAAA+AGG | 0.455559 | 4.2:+38840739 | MS.gene28355:CDS |
| ATTTAGTGAACTTAGGCAAT+CGG | 0.457331 | 4.2:-38843022 | None:intergenic |
| TTGGAAGTCAAGTGATCTCT+TGG | 0.460981 | 4.2:-38840765 | None:intergenic |
| CAAACATGTATATAGTTTGA+AGG | 0.469332 | 4.2:+38837147 | MS.gene28355:intron |
| TATTACTACAGGAAGATGTT+GGG | 0.470013 | 4.2:+38839777 | MS.gene28355:intron |
| TTATTACTACAGGAAGATGT+TGG | 0.473846 | 4.2:+38839776 | MS.gene28355:intron |
| CCTATAGATTCTCAATCGCT+TGG | 0.475831 | 4.2:+38839825 | MS.gene28355:CDS |
| CAAGTCTTAGAAGACGAGTA+TGG | 0.476058 | 4.2:+38840192 | MS.gene28355:CDS |
| ATAGTTTGAAGGTGCAGTAA+AGG | 0.476392 | 4.2:+38837158 | MS.gene28355:intron |
| GCAGTAAAGGAAGGTGGTAG+AGG | 0.488218 | 4.2:+38837171 | MS.gene28355:CDS |
| ACCCAAAGCTTTCTGCTCAA+TGG | 0.488244 | 4.2:+38844153 | MS.gene28355:CDS |
| TTACATGAAGTATTAGTCAT+AGG | 0.489885 | 4.2:-38843161 | None:intergenic |
| CCAAGCGATTGAGAATCTAT+AGG | 0.495495 | 4.2:-38839825 | None:intergenic |
| ATAGGATCTGTTAAGTAACT+TGG | 0.496012 | 4.2:-38843143 | None:intergenic |
| CAGGGCCGGCTCGAATGTAA+AGG | 0.500785 | 4.2:+38844028 | MS.gene28355:intron |
| GATTGCAATTTAGTGAACTT+AGG | 0.503385 | 4.2:-38843029 | None:intergenic |
| GTGAAGGTGTCCCAGATACT+TGG | 0.503819 | 4.2:-38837195 | None:intergenic |
| CATACTCGTCTTCTAAGACT+TGG | 0.503889 | 4.2:-38840191 | None:intergenic |
| AGTAATGGTGGATATGCAAT+GGG | 0.504655 | 4.2:+38840409 | MS.gene28355:CDS |
| AATTACCACCCAAACATGTT+GGG | 0.506442 | 4.2:-38840459 | None:intergenic |
| GTACCTTATAGCGATGGTAT+TGG | 0.507757 | 4.2:-38838613 | None:intergenic |
| GTCACACTTACTTTCGCAAA+CGG | 0.507884 | 4.2:+38836490 | MS.gene28355:CDS |
| CACTTGACTTCCAATTTGGA+TGG | 0.509427 | 4.2:+38840774 | MS.gene28355:CDS |
| TCCACGTGGCTTCATCTTTG+GGG | 0.509644 | 4.2:+38836564 | MS.gene28355:CDS |
| ACAAATTGGTTCATACCACT+TGG | 0.515567 | 4.2:+38840713 | MS.gene28355:CDS |
| TTTATGGAACCTCTAACAAC+CGG | 0.516409 | 4.2:+38842963 | MS.gene28355:CDS |
| AGGGCCGGCTCGAATGTAAA+GGG | 0.522499 | 4.2:+38844029 | MS.gene28355:intron |
| GTGGAAAACTACTCCGACTC+AGG | 0.522539 | 4.2:-38836546 | None:intergenic |
| TTGCAATCAAAGCTAGTGAA+TGG | 0.522902 | 4.2:+38843044 | MS.gene28355:CDS |
| GAATTACCACCCAAACATGT+TGG | 0.526460 | 4.2:-38840460 | None:intergenic |
| GAGCCATGGTTGTTTAGTAA+TGG | 0.533702 | 4.2:+38840394 | MS.gene28355:CDS |
| CCATGGTTGTTTAGTAATGG+TGG | 0.540507 | 4.2:+38840397 | MS.gene28355:CDS |
| GGATCTGTTAAGTAACTTGG+AGG | 0.542167 | 4.2:-38843140 | None:intergenic |
| ACCTTCACCCATCAACATCC+AGG | 0.542518 | 4.2:+38837210 | MS.gene28355:CDS |
| ATGGAAAACCTCTAGGTCCA+AGG | 0.542893 | 4.2:+38843304 | MS.gene28355:CDS |
| AACAACAAAGAGAGCAAGCA+TGG | 0.551044 | 4.2:-38836461 | None:intergenic |
| ATTACAATGATGGATTGAAA+AGG | 0.551309 | 4.2:+38844129 | MS.gene28355:CDS |
| AAAATAGAGGGGAAGTTGAG+TGG | 0.552316 | 4.2:+38839954 | MS.gene28355:intron |
| GGGTTACATTTAACGAGCCA+TGG | 0.553181 | 4.2:+38840380 | MS.gene28355:CDS |
| GAACAAAATGGAAAACCTCT+AGG | 0.554211 | 4.2:+38843297 | MS.gene28355:CDS |
| GAAAGATTATTACTTGATTG+CGG | 0.555386 | 4.2:-38843863 | None:intergenic |
| TAGCCAACAATTCGTTGATG+AGG | 0.556574 | 4.2:-38840013 | None:intergenic |
| TTTGAAGGTGCAGTAAAGGA+AGG | 0.559649 | 4.2:+38837162 | MS.gene28355:CDS |
| ACGTGGCTTCATCTTTGGGG+CGG | 0.566913 | 4.2:+38836567 | MS.gene28355:CDS |
| TGGTAGAGGACCAAGTATCT+GGG | 0.567259 | 4.2:+38837185 | MS.gene28355:CDS |
| GAAGGTGCAGTAAAGGAAGG+TGG | 0.572564 | 4.2:+38837165 | MS.gene28355:CDS |
| TTGACATCGGCAACCTGAGT+CGG | 0.575732 | 4.2:+38836533 | MS.gene28355:CDS |
| CTCAGGTTGCCGATGTCAAG+AGG | 0.581408 | 4.2:-38836529 | None:intergenic |
| AAATCCCTTTACATTCGAGC+CGG | 0.581654 | 4.2:-38844033 | None:intergenic |
| TGGAAAACCTCTAGGTCCAA+GGG | 0.581920 | 4.2:+38843305 | MS.gene28355:CDS |
| GGAAGATGTTGGGATTATGA+AGG | 0.590173 | 4.2:+38839787 | MS.gene28355:intron |
| CGGAGATAGAGTGAAGTACT+GGG | 0.599926 | 4.2:+38840360 | MS.gene28355:CDS |
| AGTGTGCAGGCATATCAAAA+GGG | 0.608518 | 4.2:+38840668 | MS.gene28355:intron |
| CTTGGAGGAGCATTGCCTTG+TGG | 0.612202 | 4.2:-38843125 | None:intergenic |
| GCAATGGGAACAACAGCACC+AGG | 0.613253 | 4.2:+38840424 | MS.gene28355:CDS |
| GAGCTAGTACCTTATAGCGA+TGG | 0.616078 | 4.2:-38838619 | None:intergenic |
| TGGATATACGTTTATCCAAG+AGG | 0.618701 | 4.2:+38843501 | MS.gene28355:CDS |
| AGTGGAGGCATAAATCATGA+AGG | 0.618703 | 4.2:+38839972 | MS.gene28355:CDS |
| GGAGGAGCATTGCCTTGTGG+AGG | 0.623056 | 4.2:-38843122 | None:intergenic |
| GGGCAAGATAGGCATAACAT+TGG | 0.623136 | 4.2:+38840688 | MS.gene28355:CDS |
| ACCTGGATGTTGATGGGTGA+AGG | 0.626176 | 4.2:-38837211 | None:intergenic |
| TACTCGTCTTCTAAGACTTG+GGG | 0.626972 | 4.2:-38840189 | None:intergenic |
| AGACTTACCCTTGGACCTAG+AGG | 0.628477 | 4.2:-38843312 | None:intergenic |
| GTTTCAACTCCTCTTGACAT+CGG | 0.629562 | 4.2:+38836520 | MS.gene28355:CDS |
| TAGTAATGGTGGATATGCAA+TGG | 0.631646 | 4.2:+38840408 | MS.gene28355:CDS |
| GTCTTAGAAGACGAGTATGG+TGG | 0.639976 | 4.2:+38840195 | MS.gene28355:CDS |
| ATAGAGGGGAAGTTGAGTGG+AGG | 0.640276 | 4.2:+38839957 | MS.gene28355:intron |
| TCTAGCCCAACATGTTTGGG+TGG | 0.652575 | 4.2:+38840454 | MS.gene28355:CDS |
| GCCCCAAAGATGAAGCCACG+TGG | 0.674470 | 4.2:-38836565 | None:intergenic |
| ATTAACCATTTACCTCCACA+AGG | 0.685327 | 4.2:+38843110 | MS.gene28355:CDS |
| CCACCATTACTAAACAACCA+TGG | 0.686919 | 4.2:-38840397 | None:intergenic |
| GGTATGCTATTGTTTCCAAG+TGG | 0.687798 | 4.2:-38840728 | None:intergenic |
| GGAGAAATACAACAATCCTG+TGG | 0.690499 | 4.2:+38843551 | MS.gene28355:CDS |
| GTTGGGCTAGAACATCGACC+TGG | 0.733866 | 4.2:-38840442 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 38836463 | 38844202 | 38836463 | ID=MS.gene28355 |
| chr4.2 | mRNA | 38836463 | 38844202 | 38836463 | ID=MS.gene28355.t1;Parent=MS.gene28355 |
| chr4.2 | exon | 38836463 | 38836606 | 38836463 | ID=MS.gene28355.t1.exon1;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38836463 | 38836606 | 38836463 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38837162 | 38837231 | 38837162 | ID=MS.gene28355.t1.exon2;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38837162 | 38837231 | 38837162 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38838573 | 38838631 | 38838573 | ID=MS.gene28355.t1.exon3;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38838573 | 38838631 | 38838573 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38839788 | 38839863 | 38839788 | ID=MS.gene28355.t1.exon4;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38839788 | 38839863 | 38839788 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38839961 | 38840038 | 38839961 | ID=MS.gene28355.t1.exon5;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38839961 | 38840038 | 38839961 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38840151 | 38840238 | 38840151 | ID=MS.gene28355.t1.exon6;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38840151 | 38840238 | 38840151 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38840318 | 38840564 | 38840318 | ID=MS.gene28355.t1.exon7;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38840318 | 38840564 | 38840318 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38840677 | 38840795 | 38840677 | ID=MS.gene28355.t1.exon8;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38840677 | 38840795 | 38840677 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38842962 | 38843179 | 38842962 | ID=MS.gene28355.t1.exon9;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38842962 | 38843179 | 38842962 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38843295 | 38843326 | 38843295 | ID=MS.gene28355.t1.exon10;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38843295 | 38843326 | 38843295 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38843489 | 38843591 | 38843489 | ID=MS.gene28355.t1.exon11;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38843489 | 38843591 | 38843489 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38843764 | 38843872 | 38843764 | ID=MS.gene28355.t1.exon12;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38843764 | 38843872 | 38843764 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| chr4.2 | exon | 38844031 | 38844202 | 38844031 | ID=MS.gene28355.t1.exon13;Parent=MS.gene28355.t1 |
| chr4.2 | CDS | 38844031 | 38844202 | 38844031 | ID=cds.MS.gene28355.t1;Parent=MS.gene28355.t1 |
| Gene Sequence |
| Protein sequence |
