Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35485.t1 | XP_003602090.2 | 93.1 | 609 | 38 | 1 | 10 | 614 | 228 | 836 | 9.50E-308 | 1065.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35485.t1 | Q84W56 | 68.7 | 635 | 170 | 7 | 3 | 614 | 253 | 881 | 1.2e-234 | 813.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35485.t1 | G7J5I7 | 93.1 | 609 | 38 | 1 | 10 | 614 | 228 | 836 | 6.9e-308 | 1065.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene35485.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene35485 | 0.810977 | 8.81E-51 | -1.69E-46 |
| MS.gene049150 | MS.gene35485 | 0.823522 | 1.32E-53 | -1.69E-46 |
| MS.gene049151 | MS.gene35485 | 0.813348 | 2.68E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene35485 | 0.831152 | 1.96E-55 | -1.69E-46 |
| MS.gene049297 | MS.gene35485 | 0.830929 | 2.23E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene35485 | 0.804333 | 2.27E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene35485 | 0.803095 | 4.10E-49 | -1.69E-46 |
| MS.gene049993 | MS.gene35485 | 0.800912 | 1.15E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene35485 | 0.82153 | 3.85E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene35485 | 0.808114 | 3.63E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene35485 | 0.81652 | 5.30E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene35485 | 0.81363 | 2.32E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene35485 | 0.809358 | 1.97E-50 | -1.69E-46 |
| MS.gene050330 | MS.gene35485 | -0.802543 | 5.34E-49 | -1.69E-46 |
| MS.gene050404 | MS.gene35485 | 0.805829 | 1.11E-49 | -1.69E-46 |
| MS.gene050406 | MS.gene35485 | 0.835793 | 1.36E-56 | -1.69E-46 |
| MS.gene050426 | MS.gene35485 | -0.837508 | 4.99E-57 | -1.69E-46 |
| MS.gene050464 | MS.gene35485 | 0.804131 | 2.50E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene35485 | 0.812494 | 4.12E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene35485 | -0.809479 | 1.85E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene35485 | 0.908795 | 1.16E-81 | -1.69E-46 |
| MS.gene051171 | MS.gene35485 | 0.838809 | 2.31E-57 | -1.69E-46 |
| MS.gene051240 | MS.gene35485 | 0.850288 | 1.87E-60 | -1.69E-46 |
| MS.gene051242 | MS.gene35485 | 0.831902 | 1.28E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene35485 | 0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene35485 | 0.81274 | 3.64E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene35485 | 0.885764 | 6.14E-72 | -1.69E-46 |
| MS.gene052011 | MS.gene35485 | -0.829564 | 4.80E-55 | -1.69E-46 |
| MS.gene052077 | MS.gene35485 | 0.832308 | 1.02E-55 | -1.69E-46 |
| MS.gene052176 | MS.gene35485 | 0.829521 | 4.91E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene35485 | 0.826403 | 2.76E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene35485 | 0.805453 | 1.33E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene35485 | -0.819825 | 9.48E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene35485 | 0.846531 | 2.05E-59 | -1.69E-46 |
| MS.gene052469 | MS.gene35485 | 0.819677 | 1.02E-52 | -1.69E-46 |
| MS.gene052600 | MS.gene35485 | 0.875313 | 3.40E-68 | -1.69E-46 |
| MS.gene053330 | MS.gene35485 | 0.847066 | 1.46E-59 | -1.69E-46 |
| MS.gene053557 | MS.gene35485 | 0.833189 | 6.15E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene35485 | 0.847985 | 8.18E-60 | -1.69E-46 |
| MS.gene053907 | MS.gene35485 | 0.828893 | 6.98E-55 | -1.69E-46 |
| MS.gene053928 | MS.gene35485 | 0.843614 | 1.26E-58 | -1.69E-46 |
| MS.gene053971 | MS.gene35485 | 0.826701 | 2.35E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene35485 | 0.810702 | 1.01E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene35485 | 0.832259 | 1.05E-55 | -1.69E-46 |
| MS.gene054719 | MS.gene35485 | 0.830854 | 2.32E-55 | -1.69E-46 |
| MS.gene054942 | MS.gene35485 | 0.826358 | 2.83E-54 | -1.69E-46 |
| MS.gene054983 | MS.gene35485 | 0.833964 | 3.94E-56 | -1.69E-46 |
| MS.gene05553 | MS.gene35485 | 0.871822 | 5.10E-67 | -1.69E-46 |
| MS.gene056305 | MS.gene35485 | 0.813915 | 2.01E-51 | -1.69E-46 |
| MS.gene056451 | MS.gene35485 | 0.808843 | 2.54E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene35485 | 0.817641 | 2.97E-52 | -1.69E-46 |
| MS.gene056633 | MS.gene35485 | 0.808016 | 3.81E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene35485 | 0.814359 | 1.60E-51 | -1.69E-46 |
| MS.gene056664 | MS.gene35485 | 0.806678 | 7.32E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene35485 | 0.822915 | 1.83E-53 | -1.69E-46 |
| MS.gene056899 | MS.gene35485 | -0.822945 | 1.81E-53 | -1.69E-46 |
| MS.gene056979 | MS.gene35485 | 0.876793 | 1.05E-68 | -1.69E-46 |
| MS.gene057121 | MS.gene35485 | 0.844628 | 6.72E-59 | -1.69E-46 |
| MS.gene057396 | MS.gene35485 | 0.827387 | 1.61E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene35485 | 0.848369 | 6.41E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene35485 | 0.842182 | 3.02E-58 | -1.69E-46 |
| MS.gene058142 | MS.gene35485 | 0.900958 | 4.35E-78 | -1.69E-46 |
| MS.gene058276 | MS.gene35485 | 0.886193 | 4.23E-72 | -1.69E-46 |
| MS.gene058710 | MS.gene35485 | 0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene058743 | MS.gene35485 | 0.836288 | 1.02E-56 | -1.69E-46 |
| MS.gene058746 | MS.gene35485 | 0.811429 | 7.03E-51 | -1.69E-46 |
| MS.gene058749 | MS.gene35485 | 0.841348 | 5.02E-58 | -1.69E-46 |
| MS.gene058833 | MS.gene35485 | 0.849698 | 2.74E-60 | -1.69E-46 |
| MS.gene05907 | MS.gene35485 | 0.807963 | 3.91E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene35485 | 0.880934 | 3.65E-70 | -1.69E-46 |
| MS.gene059285 | MS.gene35485 | 0.822001 | 2.99E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene35485 | 0.802381 | 5.76E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene35485 | 0.80024 | 1.58E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene35485 | 0.859193 | 4.90E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene35485 | 0.848097 | 7.61E-60 | -1.69E-46 |
| MS.gene059899 | MS.gene35485 | 0.806111 | 9.64E-50 | -1.69E-46 |
| MS.gene060083 | MS.gene35485 | 0.84456 | 7.01E-59 | -1.69E-46 |
| MS.gene060407 | MS.gene35485 | 0.869947 | 2.11E-66 | -1.69E-46 |
| MS.gene060994 | MS.gene35485 | 0.806259 | 8.97E-50 | -1.69E-46 |
| MS.gene061000 | MS.gene35485 | 0.806136 | 9.52E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene35485 | 0.835984 | 1.22E-56 | -1.69E-46 |
| MS.gene061114 | MS.gene35485 | -0.81194 | 5.45E-51 | -1.69E-46 |
| MS.gene061159 | MS.gene35485 | 0.824471 | 7.93E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35485.t1 | MTR_3g089020 | 95.731 | 609 | 22 | 1 | 10 | 614 | 228 | 836 | 0.0 | 1181 |
| MS.gene35485.t1 | MTR_4g103770 | 84.615 | 455 | 62 | 3 | 10 | 460 | 232 | 682 | 0.0 | 777 |
| MS.gene35485.t1 | MTR_7g014365 | 88.372 | 43 | 5 | 0 | 494 | 536 | 203 | 245 | 9.05e-16 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35485.t1 | AT5G63420 | 68.966 | 638 | 163 | 8 | 3 | 614 | 253 | 881 | 0.0 | 835 |
Find 142 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAAAGATGCAAGATTTA+AGG | 0.149877 | 3.4:+73460667 | None:intergenic |
| GCCTTAAATCTTGCATCTTT+TGG | 0.181875 | 3.4:-73460668 | MS.gene35485:CDS |
| TTGGCTGGAAACACCTTAAA+AGG | 0.186376 | 3.4:-73459190 | MS.gene35485:CDS |
| TATTTGTTGGCATGTCTTTA+AGG | 0.202740 | 3.4:-73461741 | MS.gene35485:CDS |
| CAGGGGAATCGGATGAATTT+TGG | 0.207468 | 3.4:-73458032 | MS.gene35485:CDS |
| CAAATCTTTGTGGACATCTT+TGG | 0.240355 | 3.4:-73457686 | MS.gene35485:CDS |
| ATCCATGGATGAACATAAAA+AGG | 0.267555 | 3.4:-73458876 | MS.gene35485:CDS |
| GATTCACTGGTTGTCCTTCC+AGG | 0.285382 | 3.4:+73461999 | None:intergenic |
| CAAGTGATTCATGCTCCTTC+AGG | 0.286343 | 3.4:+73459742 | None:intergenic |
| GAAGGCGATTTATCTGATTC+AGG | 0.300145 | 3.4:-73458051 | MS.gene35485:CDS |
| AAAGCTGCTGCCGATTTAAC+TGG | 0.300725 | 3.4:-73461879 | MS.gene35485:CDS |
| CCTTGGAAAAGAAAATTTAC+AGG | 0.307438 | 3.4:-73459509 | MS.gene35485:intron |
| GATGTAGATTTGATGCAAAC+TGG | 0.345615 | 3.4:+73461916 | None:intergenic |
| TGAAAGGAAGGATGGCTCTC+TGG | 0.354049 | 3.4:-73457765 | MS.gene35485:CDS |
| CTTCTAAATGTTGATATTCC+AGG | 0.354594 | 3.4:+73458899 | None:intergenic |
| AATAGAAGGGTTCTTTCTAA+TGG | 0.365515 | 3.4:-73459541 | MS.gene35485:CDS |
| ATCTTTGGCACTTAAATATG+AGG | 0.370175 | 3.4:-73457671 | None:intergenic |
| TTATTATATCAGGTATTTGT+TGG | 0.378839 | 3.4:-73461754 | MS.gene35485:intron |
| ATCGCAATGGCAATTACTTC+GGG | 0.381041 | 3.4:+73458989 | None:intergenic |
| TTTCACACTTGAGAAATAGA+AGG | 0.384172 | 3.4:-73459555 | MS.gene35485:CDS |
| GCATTTATTACCAGAGTTGA+TGG | 0.385749 | 3.4:+73461673 | None:intergenic |
| ATGCACCAGGTTATTAAGAA+TGG | 0.386575 | 3.4:-73459592 | MS.gene35485:intron |
| TTGTTTGCAGTGTGGTGGAC+TGG | 0.387215 | 3.4:+73458849 | None:intergenic |
| GGCAAATCCCACGCTGGTCC+TGG | 0.387256 | 3.4:-73458917 | MS.gene35485:CDS |
| CAACTTTCTCCCAGTTAAAT+CGG | 0.401807 | 3.4:+73461869 | None:intergenic |
| TAGATGGCATCATTGTGATT+AGG | 0.412496 | 3.4:-73459323 | MS.gene35485:intron |
| AATGAAAACTTACACACATC+TGG | 0.415170 | 3.4:-73460309 | MS.gene35485:CDS |
| AGAATGAGAATTGCATTAGA+TGG | 0.417290 | 3.4:-73459339 | MS.gene35485:CDS |
| ATTGGATCAACAATAGTTAT+GGG | 0.421279 | 3.4:-73460336 | MS.gene35485:CDS |
| GATTGGATCAACAATAGTTA+TGG | 0.427638 | 3.4:-73460337 | MS.gene35485:CDS |
| CTATTCTTCACACTGGGGAT+TGG | 0.430987 | 3.4:-73462815 | MS.gene35485:CDS |
| ATCACACGGGACTCATTACC+AGG | 0.431628 | 3.4:+73460384 | None:intergenic |
| GAATTACCACAAGATGTCTA+TGG | 0.437596 | 3.4:-73459159 | MS.gene35485:CDS |
| GAGAAAGAGACCACTACAAC+TGG | 0.440855 | 3.4:-73458078 | MS.gene35485:CDS |
| CTGGACAATGCAAATCTTTG+TGG | 0.444645 | 3.4:-73457696 | MS.gene35485:CDS |
| ACATGCATATCGTGGAGAAT+TGG | 0.445598 | 3.4:-73460286 | MS.gene35485:intron |
| GAATCACTTGGAAAATCAAC+TGG | 0.447489 | 3.4:-73459729 | MS.gene35485:CDS |
| TCTAATGGTTTCATTTCCCT+TGG | 0.447711 | 3.4:-73459526 | MS.gene35485:CDS |
| TATCGCAATGGCAATTACTT+CGG | 0.447759 | 3.4:+73458988 | None:intergenic |
| ACCAGAGTTGATGGGTCAAA+TGG | 0.450689 | 3.4:+73461682 | None:intergenic |
| GAGATAAACACAAAATTGTC+TGG | 0.454789 | 3.4:-73458938 | MS.gene35485:CDS |
| TTTATCTGATTCAGGGGAAT+CGG | 0.455159 | 3.4:-73458043 | MS.gene35485:CDS |
| AGTGATGGTGACAAAGCATT+TGG | 0.457642 | 3.4:-73459390 | MS.gene35485:CDS |
| ATCAGACATTTCTTCAGACT+TGG | 0.457953 | 3.4:+73457894 | None:intergenic |
| ATTGACGAGACACCACTTGA+TGG | 0.463031 | 3.4:-73462705 | MS.gene35485:CDS |
| GTTACAATAAGCAGATCCTT+AGG | 0.463234 | 3.4:+73460818 | None:intergenic |
| TCAACTGATGATGCAATGAA+TGG | 0.463811 | 3.4:+73458006 | None:intergenic |
| GATCTGCTTATTGTAACAAC+TGG | 0.465028 | 3.4:-73460812 | MS.gene35485:CDS |
| TCAACAAATGTGCTCTCACC+TGG | 0.467892 | 3.4:-73462017 | MS.gene35485:CDS |
| GATGGGATCAGCAGAAGTCC+TGG | 0.469354 | 3.4:-73457715 | MS.gene35485:CDS |
| CCTTGGTAAGTTTGAAAGCA+TGG | 0.473674 | 3.4:+73460639 | None:intergenic |
| ATGAATCGCATATCAGAGAT+TGG | 0.474239 | 3.4:-73460354 | MS.gene35485:CDS |
| CGATTTAACTGGGAGAAAGT+TGG | 0.476469 | 3.4:-73461868 | MS.gene35485:intron |
| AATCAGCTTCTTGACTTCCT+CGG | 0.476513 | 3.4:+73457825 | None:intergenic |
| CTCAGAGCTTGTTGGCTGAT+GGG | 0.478275 | 3.4:-73457732 | MS.gene35485:CDS |
| CACAAAGATTTGCATTGTCC+AGG | 0.480128 | 3.4:+73457697 | None:intergenic |
| TCTCAGAGCTTGTTGGCTGA+TGG | 0.481622 | 3.4:-73457733 | MS.gene35485:CDS |
| TTGGAAAATCAACTGGCATT+CGG | 0.486197 | 3.4:-73459722 | MS.gene35485:CDS |
| ATACAAAACAATATCTTCCT+TGG | 0.488079 | 3.4:+73460622 | None:intergenic |
| TCAAGAAGCTGATTGATTTG+CGG | 0.490229 | 3.4:-73457816 | MS.gene35485:CDS |
| CAATTCTCATTCTTTCATCA+AGG | 0.490742 | 3.4:+73459349 | None:intergenic |
| GACAAAGCATTTGGTACATC+CGG | 0.492657 | 3.4:-73459381 | MS.gene35485:CDS |
| GATGTCTATGGCTGGACAAA+GGG | 0.497228 | 3.4:-73459147 | MS.gene35485:CDS |
| AAGGCGATTTATCTGATTCA+GGG | 0.497243 | 3.4:-73458050 | MS.gene35485:CDS |
| CAAAAGTCCACTGGCTCACA+TGG | 0.497633 | 3.4:-73459068 | MS.gene35485:CDS |
| ACCTCTTGTTTGCAGTGTGG+TGG | 0.502821 | 3.4:+73458844 | None:intergenic |
| TTAGAAGCAGCTTGGAAGGA+TGG | 0.505273 | 3.4:-73461712 | MS.gene35485:CDS |
| AGGCACATTTCAGCTTCAAA+AGG | 0.507331 | 3.4:-73461954 | MS.gene35485:CDS |
| GATTTAAAGTTGTGAAAGGA+AGG | 0.508605 | 3.4:-73457777 | MS.gene35485:CDS |
| GAAAGGAAGGATGGCTCTCT+GGG | 0.509095 | 3.4:-73457764 | MS.gene35485:CDS |
| ACATTTCAGCTTCAAAAGGA+AGG | 0.510397 | 3.4:-73461950 | MS.gene35485:CDS |
| CTGAAGGAGCATGAATCACT+TGG | 0.511676 | 3.4:-73459741 | MS.gene35485:CDS |
| AACAAGTATTCTCCATGTAC+AGG | 0.517823 | 3.4:+73459765 | None:intergenic |
| TGGCTGGAAACACCTTAAAA+GGG | 0.519920 | 3.4:-73459189 | MS.gene35485:CDS |
| AGAGATATCTCAGAGCTTGT+TGG | 0.522256 | 3.4:-73457740 | MS.gene35485:CDS |
| TATTGATGCTTATGCACCTA+AGG | 0.528326 | 3.4:-73460834 | MS.gene35485:CDS |
| GACAGATTTAAAGTTGTGAA+AGG | 0.528331 | 3.4:-73457781 | MS.gene35485:CDS |
| GCATCAAATCTACATCGGAT+TGG | 0.529989 | 3.4:-73461909 | MS.gene35485:CDS |
| TTCATCAAGGAAGAGTTCAC+CGG | 0.530019 | 3.4:+73459362 | None:intergenic |
| TCAATTTGTCAGGTTATCCC+TGG | 0.531224 | 3.4:-73460402 | MS.gene35485:intron |
| GGACATACTTAGAAGCAGCT+TGG | 0.532316 | 3.4:-73461720 | MS.gene35485:CDS |
| ATCAACATTTAGAAGATCCA+TGG | 0.532606 | 3.4:-73458891 | MS.gene35485:CDS |
| TTGACGAGACACCACTTGAT+GGG | 0.533040 | 3.4:-73462704 | MS.gene35485:CDS |
| TCCATTTGACCCATCAACTC+TGG | 0.534282 | 3.4:-73461683 | MS.gene35485:intron |
| TACCACAAGATGTCTATGGC+TGG | 0.535188 | 3.4:-73459155 | MS.gene35485:CDS |
| TCTTCACACTGGGGATTGGA+AGG | 0.536502 | 3.4:-73462811 | MS.gene35485:intron |
| TAAAGTTGTGAAAGGAAGGA+TGG | 0.540086 | 3.4:-73457773 | MS.gene35485:CDS |
| ATCTGCCACAACAGATTCAC+TGG | 0.540628 | 3.4:+73461986 | None:intergenic |
| TTGTGGCAGATTCATTATTG+AGG | 0.541904 | 3.4:-73461974 | MS.gene35485:CDS |
| ATTAAGAATGGAGAGATGCT+TGG | 0.543149 | 3.4:-73459580 | MS.gene35485:CDS |
| ATACTTAGAAGCAGCTTGGA+AGG | 0.544162 | 3.4:-73461716 | MS.gene35485:CDS |
| TTAGAGGAACTCTCTAAAGA+AGG | 0.550937 | 3.4:-73462660 | MS.gene35485:CDS |
| CATTTCAGCTTCAAAAGGAA+GGG | 0.552543 | 3.4:-73461949 | MS.gene35485:CDS |
| GCCATTGCGATAGAAAATCC+TGG | 0.555157 | 3.4:-73458977 | MS.gene35485:CDS |
| CTGTCCCGTCAAAAGTCCAC+TGG | 0.559295 | 3.4:-73459077 | MS.gene35485:CDS |
| CATTTATTACCAGAGTTGAT+GGG | 0.561091 | 3.4:+73461674 | None:intergenic |
| GTCGGAGATGTTGAGGAAGA+TGG | 0.562067 | 3.4:-73459035 | MS.gene35485:CDS |
| TCACAACTTTAAATCTGTCA+CGG | 0.562346 | 3.4:+73457785 | None:intergenic |
| AGATGTTGAGGAAGATGGTG+AGG | 0.567241 | 3.4:-73459030 | MS.gene35485:CDS |
| GAACTGTGTCGGAGATGTTG+AGG | 0.569522 | 3.4:-73459042 | MS.gene35485:CDS |
| ATGGAACTATTCTTCACACT+GGG | 0.571280 | 3.4:-73462821 | MS.gene35485:CDS |
| GTCCAGCCATAGACATCTTG+TGG | 0.573025 | 3.4:+73459153 | None:intergenic |
| ACCACTACAACTGGAGCTGA+AGG | 0.573383 | 3.4:-73458069 | MS.gene35485:CDS |
| CTCTAAAGAAGGAGTAACAT+TGG | 0.574233 | 3.4:-73462649 | MS.gene35485:intron |
| TTCACACTTGAGAAATAGAA+GGG | 0.575027 | 3.4:-73459554 | MS.gene35485:CDS |
| AGATGTCTATGGCTGGACAA+AGG | 0.582028 | 3.4:-73459148 | MS.gene35485:CDS |
| CAATGGTTATGTTTCACGAA+AGG | 0.585188 | 3.4:-73457965 | MS.gene35485:CDS |
| GCCTTCAGCTCCAGTTGTAG+TGG | 0.589034 | 3.4:+73458068 | None:intergenic |
| GTTCTTTCCATGTGAGCCAG+TGG | 0.589970 | 3.4:+73459061 | None:intergenic |
| AAGCTGCTGCCGATTTAACT+GGG | 0.591068 | 3.4:-73461878 | MS.gene35485:CDS |
| TGGTAATGAGTCCCGTGTGA+TGG | 0.593761 | 3.4:-73460382 | MS.gene35485:CDS |
| AGCAGCTTGGAAGGATGGAA+AGG | 0.602363 | 3.4:-73461707 | MS.gene35485:CDS |
| TCACATGGAAAGAACTGTGT+CGG | 0.607611 | 3.4:-73459053 | MS.gene35485:CDS |
| CCATGCTTTCAAACTTACCA+AGG | 0.609185 | 3.4:-73460639 | MS.gene35485:CDS |
| GACAACCAGTGAATCTGTTG+TGG | 0.610763 | 3.4:-73461991 | MS.gene35485:CDS |
| TCCACCACACTGCAAACAAG+AGG | 0.611195 | 3.4:-73458845 | MS.gene35485:intron |
| GTCTGAAGAAATGTCTGATG+CGG | 0.611515 | 3.4:-73457890 | MS.gene35485:CDS |
| CAAATGTGCTCTCACCTGGA+AGG | 0.615112 | 3.4:-73462013 | MS.gene35485:CDS |
| GATGGAACTATTCTTCACAC+TGG | 0.616053 | 3.4:-73462822 | MS.gene35485:CDS |
| GATGATGGCATTGACACGGA+AGG | 0.627007 | 3.4:-73458111 | MS.gene35485:CDS |
| TGGAGAATACTTGTTCCTGA+AGG | 0.627983 | 3.4:-73459757 | MS.gene35485:CDS |
| TGCAGATGATGGCATTGACA+CGG | 0.630101 | 3.4:-73458115 | MS.gene35485:intron |
| GTTACCTCTTGTTTGCAGTG+TGG | 0.633512 | 3.4:+73458841 | None:intergenic |
| ATGTAGATTTGATGCAAACT+GGG | 0.634137 | 3.4:+73461917 | None:intergenic |
| GATTCATCATTTCCATCACA+CGG | 0.639799 | 3.4:+73460370 | None:intergenic |
| ATTCATCATTTCCATCACAC+GGG | 0.645095 | 3.4:+73460371 | None:intergenic |
| TTGATATTCCAGGACCAGCG+TGG | 0.651033 | 3.4:+73458909 | None:intergenic |
| AGGCGATTTATCTGATTCAG+GGG | 0.651319 | 3.4:-73458049 | MS.gene35485:CDS |
| TGATATTCCAGGACCAGCGT+GGG | 0.657450 | 3.4:+73458910 | None:intergenic |
| AAATCAATCAAAGCAAACAA+TGG | 0.658404 | 3.4:-73457982 | MS.gene35485:CDS |
| TTGGATCAACAATAGTTATG+GGG | 0.659409 | 3.4:-73460335 | MS.gene35485:CDS |
| ACATCTGGACATGCATATCG+TGG | 0.659861 | 3.4:-73460294 | MS.gene35485:CDS |
| AGTTTGCATCAAATCTACAT+CGG | 0.660918 | 3.4:-73461914 | MS.gene35485:CDS |
| TTGTCTGGCAAATCCCACGC+TGG | 0.665079 | 3.4:-73458923 | MS.gene35485:CDS |
| AAGATGGTGAGGAAGTACAG+TGG | 0.672062 | 3.4:-73459019 | MS.gene35485:CDS |
| TGAGGAAGTACAGTGGTAAG+CGG | 0.677242 | 3.4:-73459012 | MS.gene35485:CDS |
| ATGCAGTTGAAATATAGTGA+TGG | 0.680617 | 3.4:-73459405 | MS.gene35485:intron |
| GCAAGATTTAAGGCAGCACG+TGG | 0.681321 | 3.4:+73460677 | None:intergenic |
| TGTACAGGAAGAAAATGTTG+CGG | 0.705564 | 3.4:+73459780 | None:intergenic |
| CAACTTTAAATCTGTCACGG+AGG | 0.723247 | 3.4:+73457788 | None:intergenic |
| TCACACGGGACTCATTACCA+GGG | 0.727328 | 3.4:+73460385 | None:intergenic |
| TGGAACTATTCTTCACACTG+GGG | 0.745314 | 3.4:-73462820 | MS.gene35485:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAATAGTATTATTCT+TGG | - | chr3.4:73459335-73459354 | MS.gene35485:CDS | 10.0% |
| !! | ATTTGTATAATTATTATATC+AGG | - | chr3.4:73458729-73458748 | MS.gene35485:intron | 10.0% |
| !! | TTATAAATATAAATCACAAA+TGG | + | chr3.4:73459532-73459551 | None:intergenic | 10.0% |
| !!! | AAATAAAAATTAGTTTGAAA+AGG | + | chr3.4:73460555-73460574 | None:intergenic | 10.0% |
| !!! | ATATTAAATATTTTCAATTG+TGG | - | chr3.4:73458015-73458034 | MS.gene35485:CDS | 10.0% |
| !! | AAAATTACACCAAAAATATT+TGG | + | chr3.4:73462308-73462327 | None:intergenic | 15.0% |
| !! | AATCAGTAAAGAAAAATAAA+TGG | - | chr3.4:73462641-73462660 | MS.gene35485:intron | 15.0% |
| !! | TAAAAAAAATTGAATAGACA+AGG | + | chr3.4:73460309-73460328 | None:intergenic | 15.0% |
| !! | TAAATATAATAAAGCTGAAT+AGG | + | chr3.4:73459563-73459582 | None:intergenic | 15.0% |
| !! | TACTATTTATAATCAAAACA+TGG | + | chr3.4:73459328-73459347 | None:intergenic | 15.0% |
| !! | TTTGTGGATAAAAAAATATA+AGG | + | chr3.4:73460035-73460054 | None:intergenic | 15.0% |
| !!! | AAAAATATTTGGTGTAAATA+AGG | + | chr3.4:73462297-73462316 | None:intergenic | 15.0% |
| !!! | ATATTTTTTCTAACAATACA+AGG | + | chr3.4:73458238-73458257 | None:intergenic | 15.0% |
| !!! | TATTTTTTCTAACAATACAA+GGG | + | chr3.4:73458237-73458256 | None:intergenic | 15.0% |
| !!! | TTATTAGATACTTTCTAAAA+GGG | + | chr3.4:73461037-73461056 | None:intergenic | 15.0% |
| !!! | TTATTTACACCAAATATTTT+TGG | - | chr3.4:73462296-73462315 | MS.gene35485:intron | 15.0% |
| !!! | TTATTTTTCTTTACTGATTT+TGG | + | chr3.4:73462640-73462659 | None:intergenic | 15.0% |
| !!! | TTGATTTATTAATTTGTTGT+TGG | - | chr3.4:73459065-73459084 | MS.gene35485:CDS | 15.0% |
| !! | ATATTGATACGTAAACTAAA+AGG | + | chr3.4:73460271-73460290 | None:intergenic | 20.0% |
| !! | ATTTCATGAAATATGAACAT+TGG | - | chr3.4:73459746-73459765 | MS.gene35485:CDS | 20.0% |
| !! | CATAGTAATCAAAACTTATT+TGG | + | chr3.4:73462148-73462167 | None:intergenic | 20.0% |
| !! | CTTATTAGATACTTTCTAAA+AGG | + | chr3.4:73461038-73461057 | None:intergenic | 20.0% |
| !! | TAAATATGTAATCTCTACTT+TGG | - | chr3.4:73458187-73458206 | MS.gene35485:intron | 20.0% |
| !! | TACTATGATTATGATAAGAT+AGG | + | chr3.4:73461896-73461915 | None:intergenic | 20.0% |
| !! | TATTTATACAGGTAAGAAAA+TGG | + | chr3.4:73461804-73461823 | None:intergenic | 20.0% |
| !! | TGCTGTAAAAGATAAATATT+AGG | + | chr3.4:73461251-73461270 | None:intergenic | 20.0% |
| !! | TGTTCATATTTCATGAAATT+AGG | + | chr3.4:73459745-73459764 | None:intergenic | 20.0% |
| !! | TTATTATATCAGGTATTTGT+TGG | - | chr3.4:73458739-73458758 | MS.gene35485:intron | 20.0% |
| !! | TTGAATGAAATAATAAAGAG+AGG | + | chr3.4:73459262-73459281 | None:intergenic | 20.0% |
| !! | TTTATCTTGAAGCTTAATAT+GGG | - | chr3.4:73459940-73459959 | MS.gene35485:intron | 20.0% |
| !!! | AAAAAATACAAACTAGTTTG+TGG | + | chr3.4:73460051-73460070 | None:intergenic | 20.0% |
| !!! | AAAACAATTTTGAAAGAAAC+TGG | - | chr3.4:73460385-73460404 | MS.gene35485:CDS | 20.0% |
| !!! | AATAACATCTATATTTTTGC+AGG | - | chr3.4:73460667-73460686 | MS.gene35485:CDS | 20.0% |
| !!! | AATAAGCTATGTGATTTTTT+TGG | - | chr3.4:73461052-73461071 | MS.gene35485:intron | 20.0% |
| !!! | AATATTTATCTTTTACAGCA+TGG | - | chr3.4:73461251-73461270 | MS.gene35485:intron | 20.0% |
| !!! | AATTGTTTTTAAACTATCCT+TGG | + | chr3.4:73460374-73460393 | None:intergenic | 20.0% |
| !!! | ATAAGCTATGTGATTTTTTT+GGG | - | chr3.4:73461053-73461072 | MS.gene35485:intron | 20.0% |
| !!! | ATTAGCATTTAAGATAAACA+AGG | + | chr3.4:73458409-73458428 | None:intergenic | 20.0% |
| !!! | ATTTATTAATTTGTTGTTGG+AGG | - | chr3.4:73459068-73459087 | MS.gene35485:CDS | 20.0% |
| !!! | ATTTTTTCTAACAATACAAG+GGG | + | chr3.4:73458236-73458255 | None:intergenic | 20.0% |
| !!! | CCAAACTTTCTAAATTTTTA+GGG | + | chr3.4:73461287-73461306 | None:intergenic | 20.0% |
| !!! | TATTAGATACTTTCTAAAAG+GGG | + | chr3.4:73461036-73461055 | None:intergenic | 20.0% |
| !!! | TGATTTAAAATCAATTTGTC+AGG | - | chr3.4:73460081-73460100 | MS.gene35485:intron | 20.0% |
| !!! | TTAGCATTTAAGATAAACAA+GGG | + | chr3.4:73458408-73458427 | None:intergenic | 20.0% |
| !!! | TTTCCAATGTATTTTAACTT+CGG | - | chr3.4:73459126-73459145 | MS.gene35485:CDS | 20.0% |
| ! | AAAAATTTAGAAAGTTTGGC+TGG | - | chr3.4:73461288-73461307 | MS.gene35485:intron | 25.0% |
| ! | AAAATACTGCATTATCTGTT+TGG | - | chr3.4:73459910-73459929 | MS.gene35485:intron | 25.0% |
| ! | AAAGAAAATTTACAGGTTAG+TGG | - | chr3.4:73460991-73461010 | MS.gene35485:intron | 25.0% |
| ! | AAATCAATCAAAGCAAACAA+TGG | - | chr3.4:73462511-73462530 | MS.gene35485:intron | 25.0% |
| ! | AAGATGTAAAGACTGAAATA+TGG | + | chr3.4:73459386-73459405 | None:intergenic | 25.0% |
| ! | AATATGAACATTGGAATACA+AGG | - | chr3.4:73459755-73459774 | MS.gene35485:CDS | 25.0% |
| ! | ACTGAAGTAATATGTCAAAA+AGG | + | chr3.4:73459156-73459175 | None:intergenic | 25.0% |
| ! | ATACAAAACAATATCTTCCT+TGG | + | chr3.4:73459874-73459893 | None:intergenic | 25.0% |
| ! | ATTGGATCAACAATAGTTAT+GGG | - | chr3.4:73460157-73460176 | MS.gene35485:intron | 25.0% |
| ! | CCCTAAAAATTTAGAAAGTT+TGG | - | chr3.4:73461284-73461303 | MS.gene35485:intron | 25.0% |
| ! | CTGAAGTAATATGTCAAAAA+GGG | + | chr3.4:73459155-73459174 | None:intergenic | 25.0% |
| ! | CTTTATCTTGAAGCTTAATA+TGG | - | chr3.4:73459939-73459958 | MS.gene35485:intron | 25.0% |
| ! | GCAGAGTTGTAATAATAATT+TGG | + | chr3.4:73460348-73460367 | None:intergenic | 25.0% |
| ! | GGGGTAGAAATTTAAAAATT+AGG | + | chr3.4:73458898-73458917 | None:intergenic | 25.0% |
| ! | TATTTCAGTCTTTACATCTT+TGG | - | chr3.4:73459386-73459405 | MS.gene35485:CDS | 25.0% |
| ! | TGCACTAATTAATAGAACAT+GGG | + | chr3.4:73462362-73462381 | None:intergenic | 25.0% |
| !! | AATTCTTATCTTCCCTTTTA+AGG | + | chr3.4:73461319-73461338 | None:intergenic | 25.0% |
| !! | ATATATCTTTAGCTTATCGT+TGG | - | chr3.4:73457908-73457927 | MS.gene35485:CDS | 25.0% |
| !! | ATTTAAGATAAACAAGGGAA+AGG | + | chr3.4:73458403-73458422 | None:intergenic | 25.0% |
| !! | CATTGTCTCTAATTTTACAT+AGG | - | chr3.4:73459623-73459642 | MS.gene35485:intron | 25.0% |
| !! | CTGTAAATTTTCTTTTCCAA+GGG | + | chr3.4:73460986-73461005 | None:intergenic | 25.0% |
| !! | GCCAAACTTTCTAAATTTTT+AGG | + | chr3.4:73461288-73461307 | None:intergenic | 25.0% |
| !! | TATATCTTTAGCTTATCGTT+GGG | - | chr3.4:73457909-73457928 | MS.gene35485:CDS | 25.0% |
| !! | TGAAATTAGGCAGTATTTTA+AGG | + | chr3.4:73459732-73459751 | None:intergenic | 25.0% |
| !! | TGCTTTTACCATGTATATAT+GGG | + | chr3.4:73461845-73461864 | None:intergenic | 25.0% |
| !! | TTCTTTTCTGCAATTGATAA+TGG | - | chr3.4:73458669-73458688 | MS.gene35485:intron | 25.0% |
| !! | TTTTTCTTACCCAAATACTA+AGG | + | chr3.4:73460456-73460475 | None:intergenic | 25.0% |
| !!! | CAATGAAATTTTGAAGTAGT+GGG | + | chr3.4:73458138-73458157 | None:intergenic | 25.0% |
| !!! | CTATTTTTTGTGAAACTCAA+AGG | - | chr3.4:73462032-73462051 | MS.gene35485:CDS | 25.0% |
| !!! | TATTGTTTTGTATTCAGCTA+AGG | - | chr3.4:73459881-73459900 | MS.gene35485:intron | 25.0% |
| !!! | TTCCAATGTATTTTAACTTC+GGG | - | chr3.4:73459127-73459146 | MS.gene35485:CDS | 25.0% |
| !!! | TTTTTTCTAACAATACAAGG+GGG | + | chr3.4:73458235-73458254 | None:intergenic | 25.0% |
| AATAGAAGGGTTCTTTCTAA+TGG | - | chr3.4:73460952-73460971 | MS.gene35485:intron | 30.0% | |
| AATGAAAACTTACACACATC+TGG | - | chr3.4:73460184-73460203 | MS.gene35485:intron | 30.0% | |
| AGAAAAGAATACTAGCTAGT+GGG | + | chr3.4:73458658-73458677 | None:intergenic | 30.0% | |
| AGAATGAGAATTGCATTAGA+TGG | - | chr3.4:73461154-73461173 | MS.gene35485:intron | 30.0% | |
| AGTGAAAACCATAGTTAGAT+CGG | + | chr3.4:73462076-73462095 | None:intergenic | 30.0% | |
| AGTTTGCATCAAATCTACAT+CGG | - | chr3.4:73458579-73458598 | MS.gene35485:intron | 30.0% | |
| ATCAACATTTAGAAGATCCA+TGG | - | chr3.4:73461602-73461621 | MS.gene35485:intron | 30.0% | |
| ATCCATGGATGAACATAAAA+AGG | - | chr3.4:73461617-73461636 | MS.gene35485:intron | 30.0% | |
| ATGAAATAATAAAGAGAGGC+AGG | + | chr3.4:73459258-73459277 | None:intergenic | 30.0% | |
| ATGCAGTTGAAATATAGTGA+TGG | - | chr3.4:73461088-73461107 | MS.gene35485:intron | 30.0% | |
| ATGTAGATTTGATGCAAACT+GGG | + | chr3.4:73458579-73458598 | None:intergenic | 30.0% | |
| ATTATAAACAAGTGAGCATC+TGG | + | chr3.4:73458324-73458343 | None:intergenic | 30.0% | |
| CAATTCTCATTCTTTCATCA+AGG | + | chr3.4:73461147-73461166 | None:intergenic | 30.0% | |
| CATGAATGATTGTACTGAAA+AGG | + | chr3.4:73460589-73460608 | None:intergenic | 30.0% | |
| CCTTGGAAAAGAAAATTTAC+AGG | - | chr3.4:73460984-73461003 | MS.gene35485:intron | 30.0% | |
| CTATTAATTAGTGCAGATGA+TGG | - | chr3.4:73462367-73462386 | MS.gene35485:intron | 30.0% | |
| CTGCACTAATTAATAGAACA+TGG | + | chr3.4:73462363-73462382 | None:intergenic | 30.0% | |
| CTTCTAAATGTTGATATTCC+AGG | + | chr3.4:73461597-73461616 | None:intergenic | 30.0% | |
| GAAAAATAAATGGAAAACCG+AGG | - | chr3.4:73462651-73462670 | MS.gene35485:CDS | 30.0% | |
| GAGATAAACACAAAATTGTC+TGG | - | chr3.4:73461555-73461574 | MS.gene35485:intron | 30.0% | |
| GATTGGATCAACAATAGTTA+TGG | - | chr3.4:73460156-73460175 | MS.gene35485:intron | 30.0% | |
| GTATTTGGGTAAGAAAAATG+AGG | - | chr3.4:73460458-73460477 | MS.gene35485:intron | 30.0% | |
| TAGTAGAATGCTACTGTTAT+TGG | - | chr3.4:73461976-73461995 | MS.gene35485:CDS | 30.0% | |
| TATTTCAACTGCATGAGAAA+AGG | + | chr3.4:73461082-73461101 | None:intergenic | 30.0% | |
| TCACAACTTTAAATCTGTCA+CGG | + | chr3.4:73462711-73462730 | None:intergenic | 30.0% | |
| TCCAAAAGATGCAAGATTTA+AGG | + | chr3.4:73459829-73459848 | None:intergenic | 30.0% | |
| TGACAGCATACTGTATTTAA+AGG | + | chr3.4:73459217-73459236 | None:intergenic | 30.0% | |
| TGATTTCAAGAGGTTCATTA+TGG | - | chr3.4:73459190-73459209 | MS.gene35485:CDS | 30.0% | |
| TGTCATTATCTGTGACTAAT+TGG | - | chr3.4:73459232-73459251 | MS.gene35485:intron | 30.0% | |
| TTACTAAATAGACTGTAGTC+AGG | + | chr3.4:73462247-73462266 | None:intergenic | 30.0% | |
| TTATCTTCACAAAACAATGC+TGG | - | chr3.4:73462103-73462122 | MS.gene35485:intron | 30.0% | |
| TTCACACTTGAGAAATAGAA+GGG | - | chr3.4:73460939-73460958 | MS.gene35485:intron | 30.0% | |
| TTGATACGTAAACTAAAAGG+AGG | + | chr3.4:73460268-73460287 | None:intergenic | 30.0% | |
| TTGGATCAACAATAGTTATG+GGG | - | chr3.4:73460158-73460177 | MS.gene35485:intron | 30.0% | |
| TTTCACACTTGAGAAATAGA+AGG | - | chr3.4:73460938-73460957 | MS.gene35485:intron | 30.0% | |
| ! | AATATATGTGCTTTTGTGTC+AGG | - | chr3.4:73459788-73459807 | MS.gene35485:CDS | 30.0% |
| ! | CATTTATTACCAGAGTTGAT+GGG | + | chr3.4:73458822-73458841 | None:intergenic | 30.0% |
| ! | CCTGTAAATTTTCTTTTCCA+AGG | + | chr3.4:73460987-73461006 | None:intergenic | 30.0% |
| ! | GACACAAAAGCACATATATT+TGG | + | chr3.4:73459788-73459807 | None:intergenic | 30.0% |
| ! | GACAGATTTAAAGTTGTGAA+AGG | - | chr3.4:73462712-73462731 | MS.gene35485:CDS | 30.0% |
| ! | GATTTAAAGTTGTGAAAGGA+AGG | - | chr3.4:73462716-73462735 | MS.gene35485:CDS | 30.0% |
| ! | TATTTGTTGGCATGTCTTTA+AGG | - | chr3.4:73458752-73458771 | MS.gene35485:intron | 30.0% |
| ! | TTCCTTTTTATGTTCATCCA+TGG | + | chr3.4:73461622-73461641 | None:intergenic | 30.0% |
| ! | TTGATGGGAAAGTTTTTGAT+CGG | - | chr3.4:73457804-73457823 | MS.gene35485:CDS | 30.0% |
| ! | TTTTGTATTCAGCTAAGGTA+TGG | - | chr3.4:73459886-73459905 | MS.gene35485:intron | 30.0% |
| ! | TTTTTCTAACAATACAAGGG+GGG | + | chr3.4:73458234-73458253 | None:intergenic | 30.0% |
| !! | AACATCTATATTTTTGCAGG+AGG | - | chr3.4:73460670-73460689 | MS.gene35485:CDS | 30.0% |
| !! | AATATAAGGTGTTGCTAGAA+AGG | + | chr3.4:73460021-73460040 | None:intergenic | 30.0% |
| !! | CTGCTTTTACCATGTATATA+TGG | + | chr3.4:73461846-73461865 | None:intergenic | 30.0% |
| !! | TGGTGTAAATAAGGTATTGA+AGG | + | chr3.4:73462288-73462307 | None:intergenic | 30.0% |
| !!! | GATCTGCTTTTTCATTTACT+AGG | - | chr3.4:73458963-73458982 | MS.gene35485:CDS | 30.0% |
| !!! | GCAATGAAATTTTGAAGTAG+TGG | + | chr3.4:73458139-73458158 | None:intergenic | 30.0% |
| !!! | GTCAGTTTTGCTATTTATAC+AGG | + | chr3.4:73461815-73461834 | None:intergenic | 30.0% |
| AAAGCCATATTCAGCTTAAC+AGG | + | chr3.4:73458071-73458090 | None:intergenic | 35.0% | |
| AACAAGTATTCTCCATGTAC+AGG | + | chr3.4:73460731-73460750 | None:intergenic | 35.0% | |
| AAGCCATATTCAGCTTAACA+GGG | + | chr3.4:73458070-73458089 | None:intergenic | 35.0% | |
| AAGCTAAGAAGTCTCACTTT+GGG | - | chr3.4:73462168-73462187 | MS.gene35485:intron | 35.0% | |
| AAGGCGATTTATCTGATTCA+GGG | - | chr3.4:73462443-73462462 | MS.gene35485:intron | 35.0% | |
| AATTAGAGACAATGAGATGC+AGG | + | chr3.4:73459617-73459636 | None:intergenic | 35.0% | |
| ACATCTTTGGTAGAATTTCC+AGG | - | chr3.4:73459399-73459418 | MS.gene35485:CDS | 35.0% | |
| ACATTTCAGCTTCAAAAGGA+AGG | - | chr3.4:73458543-73458562 | MS.gene35485:intron | 35.0% | |
| ATATTGAACTGTCAACTGCT+GGG | - | chr3.4:73461698-73461717 | MS.gene35485:CDS | 35.0% | |
| ATCAGACATTTCTTCAGACT+TGG | + | chr3.4:73462602-73462621 | None:intergenic | 35.0% | |
| ATGAATCGCATATCAGAGAT+TGG | - | chr3.4:73460139-73460158 | MS.gene35485:intron | 35.0% | |
| ATGCACCAGGTTATTAAGAA+TGG | - | chr3.4:73460901-73460920 | MS.gene35485:intron | 35.0% | |
| ATGCTAATCACAAGCAAACA+TGG | - | chr3.4:73458421-73458440 | MS.gene35485:intron | 35.0% | |
| ATGGAACTATTCTTCACACT+GGG | - | chr3.4:73457672-73457691 | MS.gene35485:CDS | 35.0% | |
| ATTAAGAATGGAGAGATGCT+TGG | - | chr3.4:73460913-73460932 | MS.gene35485:intron | 35.0% | |
| ATTAGAGACAATGAGATGCA+GGG | + | chr3.4:73459616-73459635 | None:intergenic | 35.0% | |
| ATTCATCATTTCCATCACAC+GGG | + | chr3.4:73460125-73460144 | None:intergenic | 35.0% | |
| CAAATCTTTGTGGACATCTT+TGG | - | chr3.4:73462807-73462826 | MS.gene35485:intron | 35.0% | |
| CAACTTTCTCCCAGTTAAAT+CGG | + | chr3.4:73458627-73458646 | None:intergenic | 35.0% | |
| CAATGGTTATGTTTCACGAA+AGG | - | chr3.4:73462528-73462547 | MS.gene35485:intron | 35.0% | |
| CAGAAAAGAATACTAGCTAG+TGG | + | chr3.4:73458659-73458678 | None:intergenic | 35.0% | |
| CATTTCAGCTTCAAAAGGAA+GGG | - | chr3.4:73458544-73458563 | MS.gene35485:intron | 35.0% | |
| CCTCGAAAGTTGTTAAAGTA+GGG | + | chr3.4:73459436-73459455 | None:intergenic | 35.0% | |
| CTCCCGAAGTTAAAATACAT+TGG | + | chr3.4:73459132-73459151 | None:intergenic | 35.0% | |
| CTTGAAATCAGTGTAGTCAA+AGG | + | chr3.4:73459180-73459199 | None:intergenic | 35.0% | |
| CTTTATCACAAGATCTGTCT+GGG | + | chr3.4:73460820-73460839 | None:intergenic | 35.0% | |
| GAATCACTTGGAAAATCAAC+TGG | - | chr3.4:73460764-73460783 | MS.gene35485:intron | 35.0% | |
| GAATTACCACAAGATGTCTA+TGG | - | chr3.4:73461334-73461353 | MS.gene35485:intron | 35.0% | |
| GATCTGCTTATTGTAACAAC+TGG | - | chr3.4:73459681-73459700 | MS.gene35485:intron | 35.0% | |
| GATGTAGATTTGATGCAAAC+TGG | + | chr3.4:73458580-73458599 | None:intergenic | 35.0% | |
| GATTCATCATTTCCATCACA+CGG | + | chr3.4:73460126-73460145 | None:intergenic | 35.0% | |
| GCAGGTTGTAATTTCATGAT+AGG | + | chr3.4:73459982-73460001 | None:intergenic | 35.0% | |
| GCATTTATTACCAGAGTTGA+TGG | + | chr3.4:73458823-73458842 | None:intergenic | 35.0% | |
| GGAGATTCAAGGTAAATGAA+AGG | + | chr3.4:73457742-73457761 | None:intergenic | 35.0% | |
| GTTACAATAAGCAGATCCTT+AGG | + | chr3.4:73459678-73459697 | None:intergenic | 35.0% | |
| TAAAGTTGTGAAAGGAAGGA+TGG | - | chr3.4:73462720-73462739 | MS.gene35485:CDS | 35.0% | |
| TAAGCTGAATATGGCTTTCA+TGG | - | chr3.4:73458073-73458092 | MS.gene35485:CDS | 35.0% | |
| TAGATGGCATCATTGTGATT+AGG | - | chr3.4:73461170-73461189 | MS.gene35485:intron | 35.0% | |
| TATACATGGTAAAAGCAGAG+TGG | - | chr3.4:73461848-73461867 | MS.gene35485:intron | 35.0% | |
| TATCGCAATGGCAATTACTT+CGG | + | chr3.4:73461508-73461527 | None:intergenic | 35.0% | |
| TATGTGAACCGATCTAACTA+TGG | - | chr3.4:73462065-73462084 | MS.gene35485:intron | 35.0% | |
| TATTACAACTCTGCTAACCA+AGG | - | chr3.4:73460354-73460373 | MS.gene35485:CDS | 35.0% | |
| TATTGATGCTTATGCACCTA+AGG | - | chr3.4:73459659-73459678 | MS.gene35485:intron | 35.0% | |
| TCAAAAACTTTCCCATCAAG+TGG | + | chr3.4:73457803-73457822 | None:intergenic | 35.0% | |
| TCTAATGGTTTCATTTCCCT+TGG | - | chr3.4:73460967-73460986 | MS.gene35485:intron | 35.0% | |
| TCTCTCCATTCTTAATAACC+TGG | + | chr3.4:73460909-73460928 | None:intergenic | 35.0% | |
| TCTTCCTAATTTGATGCACT+TGG | - | chr3.4:73458864-73458883 | MS.gene35485:CDS | 35.0% | |
| TCTTTATCACAAGATCTGTC+TGG | + | chr3.4:73460821-73460840 | None:intergenic | 35.0% | |
| TGTACAGGAAGAAAATGTTG+CGG | + | chr3.4:73460716-73460735 | None:intergenic | 35.0% | |
| TTGGAAAATCAACTGGCATT+CGG | - | chr3.4:73460771-73460790 | MS.gene35485:intron | 35.0% | |
| TTGTGGCAGATTCATTATTG+AGG | - | chr3.4:73458519-73458538 | MS.gene35485:intron | 35.0% | |
| TTTATCTGATTCAGGGGAAT+CGG | - | chr3.4:73462450-73462469 | MS.gene35485:intron | 35.0% | |
| TTTGGGTGTAAATCTTGAGA+CGG | - | chr3.4:73462185-73462204 | MS.gene35485:intron | 35.0% | |
| ! | CAACATTTTCTTCCTGTACA+TGG | - | chr3.4:73460716-73460735 | MS.gene35485:intron | 35.0% |
| ! | CTCTAAAGAAGGAGTAACAT+TGG | - | chr3.4:73457844-73457863 | MS.gene35485:CDS | 35.0% |
| ! | GCCTTAAATCTTGCATCTTT+TGG | - | chr3.4:73459825-73459844 | MS.gene35485:intron | 35.0% |
| ! | TCAACTGATGATGCAATGAA+TGG | + | chr3.4:73462490-73462509 | None:intergenic | 35.0% |
| ! | TGATGGGAAAGTTTTTGATC+GGG | - | chr3.4:73457805-73457824 | MS.gene35485:CDS | 35.0% |
| ! | TTAGAGGAACTCTCTAAAGA+AGG | - | chr3.4:73457833-73457852 | MS.gene35485:CDS | 35.0% |
| ! | TTTTACATAGGTGAAAGCAG+AGG | - | chr3.4:73459635-73459654 | MS.gene35485:intron | 35.0% |
| !! | AGTTTAGTCTTGAAAGCAGA+TGG | + | chr3.4:73459304-73459323 | None:intergenic | 35.0% |
| !! | GGTTATGGTTTTACAGAAGT+TGG | - | chr3.4:73459023-73459042 | MS.gene35485:CDS | 35.0% |
| !! | TCAAGAAGCTGATTGATTTG+CGG | - | chr3.4:73462677-73462696 | MS.gene35485:CDS | 35.0% |
| !! | TTGACTACACTGATTTCAAG+AGG | - | chr3.4:73459180-73459199 | MS.gene35485:CDS | 35.0% |
| !!! | TTTACTGATTTTGGAGACTC+TGG | + | chr3.4:73462631-73462650 | None:intergenic | 35.0% |
| AAAATAGACCAGCTGAATGC+AGG | + | chr3.4:73462019-73462038 | None:intergenic | 40.0% | |
| AAGGAGAACAGGGAAAACAT+TGG | + | chr3.4:73460437-73460456 | None:intergenic | 40.0% | |
| AATCAGCTTCTTGACTTCCT+CGG | + | chr3.4:73462671-73462690 | None:intergenic | 40.0% | |
| ACATGCATATCGTGGAGAAT+TGG | - | chr3.4:73460207-73460226 | MS.gene35485:intron | 40.0% | |
| ACCCAAATACTAAGGAGAAC+AGG | + | chr3.4:73460448-73460467 | None:intergenic | 40.0% | |
| ACTGATGATCTTTATGCACC+AGG | - | chr3.4:73460888-73460907 | MS.gene35485:intron | 40.0% | |
| AGAACAGGGAAAACATTGGA+AGG | + | chr3.4:73460433-73460452 | None:intergenic | 40.0% | |
| AGAGATATCTCAGAGCTTGT+TGG | - | chr3.4:73462753-73462772 | MS.gene35485:intron | 40.0% | |
| AGGCACATTTCAGCTTCAAA+AGG | - | chr3.4:73458539-73458558 | MS.gene35485:intron | 40.0% | |
| AGGCGATTTATCTGATTCAG+GGG | - | chr3.4:73462444-73462463 | MS.gene35485:intron | 40.0% | |
| AGTAACATTGGTAAGTCACC+TGG | - | chr3.4:73457856-73457875 | MS.gene35485:CDS | 40.0% | |
| AGTCCCTGTTAAGCTGAATA+TGG | - | chr3.4:73458064-73458083 | MS.gene35485:CDS | 40.0% | |
| ATACTTAGAAGCAGCTTGGA+AGG | - | chr3.4:73458777-73458796 | MS.gene35485:intron | 40.0% | |
| ATCACAAGCAAACATGGCTT+TGG | - | chr3.4:73458427-73458446 | MS.gene35485:intron | 40.0% | |
| ATCGCAATGGCAATTACTTC+GGG | + | chr3.4:73461507-73461526 | None:intergenic | 40.0% | |
| CAACTTTAAATCTGTCACGG+AGG | + | chr3.4:73462708-73462727 | None:intergenic | 40.0% | |
| CACAAAGATTTGCATTGTCC+AGG | + | chr3.4:73462799-73462818 | None:intergenic | 40.0% | |
| CATATTGAACTGTCAACTGC+TGG | - | chr3.4:73461697-73461716 | MS.gene35485:CDS | 40.0% | |
| CCAACGATCCCATATATACA+TGG | - | chr3.4:73461834-73461853 | MS.gene35485:intron | 40.0% | |
| CCATGCTTTCAAACTTACCA+AGG | - | chr3.4:73459854-73459873 | MS.gene35485:intron | 40.0% | |
| CCATGTATATATGGGATCGT+TGG | + | chr3.4:73461837-73461856 | None:intergenic | 40.0% | |
| CCCAAATACTAAGGAGAACA+GGG | + | chr3.4:73460447-73460466 | None:intergenic | 40.0% | |
| CCCTACTTTAACAACTTTCG+AGG | - | chr3.4:73459433-73459452 | MS.gene35485:intron | 40.0% | |
| CCCTGTTCTCCTTAGTATTT+GGG | - | chr3.4:73460444-73460463 | MS.gene35485:intron | 40.0% | |
| CCTTGGTAAGTTTGAAAGCA+TGG | + | chr3.4:73459857-73459876 | None:intergenic | 40.0% | |
| CGATTTAACTGGGAGAAAGT+TGG | - | chr3.4:73458625-73458644 | MS.gene35485:intron | 40.0% | |
| CTGGACAATGCAAATCTTTG+TGG | - | chr3.4:73462797-73462816 | MS.gene35485:intron | 40.0% | |
| GAAGCTAAGAAGTCTCACTT+TGG | - | chr3.4:73462167-73462186 | MS.gene35485:intron | 40.0% | |
| GAAGGCGATTTATCTGATTC+AGG | - | chr3.4:73462442-73462461 | MS.gene35485:intron | 40.0% | |
| GCATCAAATCTACATCGGAT+TGG | - | chr3.4:73458584-73458603 | MS.gene35485:intron | 40.0% | |
| GCCTCGAAAGTTGTTAAAGT+AGG | + | chr3.4:73459437-73459456 | None:intergenic | 40.0% | |
| GGATCTTTGCTACTAACTAC+TGG | - | chr3.4:73457877-73457896 | MS.gene35485:CDS | 40.0% | |
| GGATTGGAAGTTAGAATAGC+AGG | + | chr3.4:73460000-73460019 | None:intergenic | 40.0% | |
| GGCTACTAACAGTTTACTTG+AGG | - | chr3.4:73457989-73458008 | MS.gene35485:CDS | 40.0% | |
| GTAGTTAGTAGCAAAGATCC+AGG | + | chr3.4:73457877-73457896 | None:intergenic | 40.0% | |
| GTCACCAAGTGCATCAAATT+AGG | + | chr3.4:73458871-73458890 | None:intergenic | 40.0% | |
| GTCTGAAGAAATGTCTGATG+CGG | - | chr3.4:73462603-73462622 | MS.gene35485:intron | 40.0% | |
| TCAATTTGTCAGGTTATCCC+TGG | - | chr3.4:73460091-73460110 | MS.gene35485:intron | 40.0% | |
| TCACAAAACAATGCTGGTGA+AGG | - | chr3.4:73462109-73462128 | MS.gene35485:intron | 40.0% | |
| TCACATGGAAAGAACTGTGT+CGG | - | chr3.4:73461440-73461459 | MS.gene35485:intron | 40.0% | |
| TCCCTGTTCTCCTTAGTATT+TGG | - | chr3.4:73460443-73460462 | MS.gene35485:intron | 40.0% | |
| TGAATCTCCTGTTGCTGAAA+AGG | - | chr3.4:73457753-73457772 | MS.gene35485:CDS | 40.0% | |
| TGGAACTATTCTTCACACTG+GGG | - | chr3.4:73457673-73457692 | MS.gene35485:CDS | 40.0% | |
| TGGAGAATACTTGTTCCTGA+AGG | - | chr3.4:73460736-73460755 | MS.gene35485:intron | 40.0% | |
| TGGCTGGAAACACCTTAAAA+GGG | - | chr3.4:73461304-73461323 | MS.gene35485:intron | 40.0% | |
| TTCATCAAGGAAGAGTTCAC+CGG | + | chr3.4:73461134-73461153 | None:intergenic | 40.0% | |
| TTGGCTGGAAACACCTTAAA+AGG | - | chr3.4:73461303-73461322 | MS.gene35485:intron | 40.0% | |
| TTTCAGCAACAGGAGATTCA+AGG | + | chr3.4:73457753-73457772 | None:intergenic | 40.0% | |
| ! | AATTTGATGCACTTGGTGAC+TGG | - | chr3.4:73458871-73458890 | MS.gene35485:CDS | 40.0% |
| ! | AGTGATGGTGACAAAGCATT+TGG | - | chr3.4:73461103-73461122 | MS.gene35485:intron | 40.0% |
| ! | GAATCAACCTTTTCAGCAAC+AGG | + | chr3.4:73457763-73457782 | None:intergenic | 40.0% |
| ! | GACAAAGCATTTGGTACATC+CGG | - | chr3.4:73461112-73461131 | MS.gene35485:intron | 40.0% |
| ! | TCCAGGATTTTCTATCGCAA+TGG | + | chr3.4:73461520-73461539 | None:intergenic | 40.0% |
| !! | AAGGTGTTGCTAGAAAGGAT+TGG | + | chr3.4:73460016-73460035 | None:intergenic | 40.0% |
| !! | ATCTGGTTGGTTCACTTTTG+TGG | - | chr3.4:73461721-73461740 | MS.gene35485:CDS | 40.0% |
| ACATCTGGACATGCATATCG+TGG | - | chr3.4:73460199-73460218 | MS.gene35485:intron | 45.0% | |
| AGATGTCTATGGCTGGACAA+AGG | - | chr3.4:73461345-73461364 | MS.gene35485:intron | 45.0% | |
| AGATGTTGAGGAAGATGGTG+AGG | - | chr3.4:73461463-73461482 | MS.gene35485:intron | 45.0% | |
| AGCAGAAATGCAGTGCATGT+AGG | - | chr3.4:73458991-73459010 | MS.gene35485:CDS | 45.0% | |
| AGTAGGGAGTAAATACTGCC+TGG | + | chr3.4:73459420-73459439 | None:intergenic | 45.0% | |
| ATCTGCCACAACAGATTCAC+TGG | + | chr3.4:73458510-73458529 | None:intergenic | 45.0% | |
| ATTGACGAGACACCACTTGA+TGG | - | chr3.4:73457788-73457807 | MS.gene35485:CDS | 45.0% | |
| CAAGTGATTCATGCTCCTTC+AGG | + | chr3.4:73460754-73460773 | None:intergenic | 45.0% | |
| CTATTCTTCACACTGGGGAT+TGG | - | chr3.4:73457678-73457697 | MS.gene35485:CDS | 45.0% | |
| GACAACCAGTGAATCTGTTG+TGG | - | chr3.4:73458502-73458521 | MS.gene35485:intron | 45.0% | |
| GACTGTATGGTCCATGTGTT+GGG | + | chr3.4:73458925-73458944 | None:intergenic | 45.0% | |
| GAGAAAGAGACCACTACAAC+TGG | - | chr3.4:73462415-73462434 | MS.gene35485:intron | 45.0% | |
| GAGGTGATTGTCTATCTTCG+TGG | - | chr3.4:73460477-73460496 | MS.gene35485:intron | 45.0% | |
| GATGTCTATGGCTGGACAAA+GGG | - | chr3.4:73461346-73461365 | MS.gene35485:intron | 45.0% | |
| GCCATTGCGATAGAAAATCC+TGG | - | chr3.4:73461516-73461535 | MS.gene35485:intron | 45.0% | |
| GGACATACTTAGAAGCAGCT+TGG | - | chr3.4:73458773-73458792 | MS.gene35485:intron | 45.0% | |
| GTTATTGGCATGTGACACTC+AGG | - | chr3.4:73461991-73462010 | MS.gene35485:CDS | 45.0% | |
| TACCACAAGATGTCTATGGC+TGG | - | chr3.4:73461338-73461357 | MS.gene35485:intron | 45.0% | |
| TAGCCTTCAGCATGACTGTA+TGG | + | chr3.4:73458938-73458957 | None:intergenic | 45.0% | |
| TATCACAAGATCTGTCTGGG+AGG | + | chr3.4:73460817-73460836 | None:intergenic | 45.0% | |
| TATGGTCCATGTGTTGGGAT+GGG | + | chr3.4:73458920-73458939 | None:intergenic | 45.0% | |
| TCAACAAATGTGCTCTCACC+TGG | - | chr3.4:73458476-73458495 | MS.gene35485:intron | 45.0% | |
| TCATCAGCAAAAACTGCTCC+AGG | + | chr3.4:73461537-73461556 | None:intergenic | 45.0% | |
| TCCATTTGACCCATCAACTC+TGG | - | chr3.4:73458810-73458829 | MS.gene35485:intron | 45.0% | |
| TGACTGTATGGTCCATGTGT+TGG | + | chr3.4:73458926-73458945 | None:intergenic | 45.0% | |
| TTAGAAGCAGCTTGGAAGGA+TGG | - | chr3.4:73458781-73458800 | MS.gene35485:intron | 45.0% | |
| TTGACGAGACACCACTTGAT+GGG | - | chr3.4:73457789-73457808 | MS.gene35485:CDS | 45.0% | |
| ! | AAGATGGTGAGGAAGTACAG+TGG | - | chr3.4:73461474-73461493 | MS.gene35485:intron | 45.0% |
| ! | CAGGGGAATCGGATGAATTT+TGG | - | chr3.4:73462461-73462480 | MS.gene35485:intron | 45.0% |
| ! | CTGAAGGAGCATGAATCACT+TGG | - | chr3.4:73460752-73460771 | MS.gene35485:intron | 45.0% |
| ! | GGGAAAGTTTTTGATCGGGA+GGG | - | chr3.4:73457809-73457828 | MS.gene35485:CDS | 45.0% |
| ! | GTTACCTCTTGTTTGCAGTG+TGG | + | chr3.4:73461655-73461674 | None:intergenic | 45.0% |
| ! | TGAGGAAGTACAGTGGTAAG+CGG | - | chr3.4:73461481-73461500 | MS.gene35485:intron | 45.0% |
| ! | TGGGAAAGTTTTTGATCGGG+AGG | - | chr3.4:73457808-73457827 | MS.gene35485:CDS | 45.0% |
| ! | TGTAGGCAAGTCACTGGTTA+TGG | - | chr3.4:73459008-73459027 | MS.gene35485:CDS | 45.0% |
| ! | TTTTGATCGGGAGGGTTTAG+AGG | - | chr3.4:73457817-73457836 | MS.gene35485:CDS | 45.0% |
| !! | AAAGCTGCTGCCGATTTAAC+TGG | - | chr3.4:73458614-73458633 | MS.gene35485:intron | 45.0% |
| !! | AAGCTGCTGCCGATTTAACT+GGG | - | chr3.4:73458615-73458634 | MS.gene35485:intron | 45.0% |
| !! | ACCAGAGTTGATGGGTCAAA+TGG | + | chr3.4:73458814-73458833 | None:intergenic | 45.0% |
| !! | TGCAGATGATGGCATTGACA+CGG | - | chr3.4:73462378-73462397 | MS.gene35485:intron | 45.0% |
| AACTGTCAACTGCTGGGATC+TGG | - | chr3.4:73461704-73461723 | MS.gene35485:CDS | 50.0% | |
| ACCACTACAACTGGAGCTGA+AGG | - | chr3.4:73462424-73462443 | MS.gene35485:intron | 50.0% | |
| AGCAGCTTGGAAGGATGGAA+AGG | - | chr3.4:73458786-73458805 | MS.gene35485:intron | 50.0% | |
| AGTGCATGTAGGCAAGTCAC+TGG | - | chr3.4:73459002-73459021 | MS.gene35485:CDS | 50.0% | |
| ATCACACGGGACTCATTACC+AGG | + | chr3.4:73460112-73460131 | None:intergenic | 50.0% | |
| ATGGTCCATGTGTTGGGATG+GGG | + | chr3.4:73458919-73458938 | None:intergenic | 50.0% | |
| CAAATGTGCTCTCACCTGGA+AGG | - | chr3.4:73458480-73458499 | MS.gene35485:intron | 50.0% | |
| CATGGTAAAAGCAGAGTGGC+AGG | - | chr3.4:73461852-73461871 | MS.gene35485:intron | 50.0% | |
| GAAAGGAAGGATGGCTCTCT+GGG | - | chr3.4:73462729-73462748 | MS.gene35485:intron | 50.0% | |
| GAACTGTGTCGGAGATGTTG+AGG | - | chr3.4:73461451-73461470 | MS.gene35485:intron | 50.0% | |
| GGACCATACAGTCATGCTGA+AGG | - | chr3.4:73458932-73458951 | MS.gene35485:CDS | 50.0% | |
| GGGTGTAAATCTTGAGACGG+TGG | - | chr3.4:73462188-73462207 | MS.gene35485:intron | 50.0% | |
| GTATGGTCCATGTGTTGGGA+TGG | + | chr3.4:73458921-73458940 | None:intergenic | 50.0% | |
| GTCCAGCCATAGACATCTTG+TGG | + | chr3.4:73461343-73461362 | None:intergenic | 50.0% | |
| GTCGGAGATGTTGAGGAAGA+TGG | - | chr3.4:73461458-73461477 | MS.gene35485:intron | 50.0% | |
| GTTCTTTCCATGTGAGCCAG+TGG | + | chr3.4:73461435-73461454 | None:intergenic | 50.0% | |
| TCACACGGGACTCATTACCA+GGG | + | chr3.4:73460111-73460130 | None:intergenic | 50.0% | |
| TCCACCACACTGCAAACAAG+AGG | - | chr3.4:73461648-73461667 | MS.gene35485:intron | 50.0% | |
| TCTTCACACTGGGGATTGGA+AGG | - | chr3.4:73457682-73457701 | MS.gene35485:CDS | 50.0% | |
| TGAAAGGAAGGATGGCTCTC+TGG | - | chr3.4:73462728-73462747 | MS.gene35485:intron | 50.0% | |
| TGATATTCCAGGACCAGCGT+GGG | + | chr3.4:73461586-73461605 | None:intergenic | 50.0% | |
| TTCATGGTCAGTTGCAGTGC+TGG | - | chr3.4:73458089-73458108 | MS.gene35485:CDS | 50.0% | |
| TTGATATTCCAGGACCAGCG+TGG | + | chr3.4:73461587-73461606 | None:intergenic | 50.0% | |
| ! | ACCTCTTGTTTGCAGTGTGG+TGG | + | chr3.4:73461652-73461671 | None:intergenic | 50.0% |
| ! | GAAGAGCATGAGAGTTTCGC+AGG | - | chr3.4:73457968-73457987 | MS.gene35485:CDS | 50.0% |
| ! | GATTCACTGGTTGTCCTTCC+AGG | + | chr3.4:73458497-73458516 | None:intergenic | 50.0% |
| ! | GCAAGATTTAAGGCAGCACG+TGG | + | chr3.4:73459819-73459838 | None:intergenic | 50.0% |
| ! | GTGCTGGTAGATCTGCTCAA+AGG | - | chr3.4:73458105-73458124 | MS.gene35485:CDS | 50.0% |
| ! | TGGTAATGAGTCCCGTGTGA+TGG | - | chr3.4:73460111-73460130 | MS.gene35485:intron | 50.0% |
| ! | TTGTGGTGATGCTCTCTGAG+CGG | - | chr3.4:73458032-73458051 | MS.gene35485:CDS | 50.0% |
| !! | CAAAAGTCCACTGGCTCACA+TGG | - | chr3.4:73461425-73461444 | MS.gene35485:intron | 50.0% |
| !! | CTCAGAGCTTGTTGGCTGAT+GGG | - | chr3.4:73462761-73462780 | MS.gene35485:intron | 50.0% |
| !! | GATGATGGCATTGACACGGA+AGG | - | chr3.4:73462382-73462401 | MS.gene35485:intron | 50.0% |
| !! | GTGAGCCAGTGGACTTTTGA+CGG | + | chr3.4:73461424-73461443 | None:intergenic | 50.0% |
| !! | TCTCAGAGCTTGTTGGCTGA+TGG | - | chr3.4:73462760-73462779 | MS.gene35485:intron | 50.0% |
| !! | TGAGCCAGTGGACTTTTGAC+GGG | + | chr3.4:73461423-73461442 | None:intergenic | 50.0% |
| !! | TTGTTTGCAGTGTGGTGGAC+TGG | + | chr3.4:73461647-73461666 | None:intergenic | 50.0% |
| CAGAGTGGCAGGCAACAATC+AGG | - | chr3.4:73461863-73461882 | MS.gene35485:intron | 55.0% | |
| CTCAGGTTCCTGCATTCAGC+TGG | - | chr3.4:73462008-73462027 | MS.gene35485:CDS | 55.0% | |
| CTGTCCCGTCAAAAGTCCAC+TGG | - | chr3.4:73461416-73461435 | MS.gene35485:intron | 55.0% | |
| GATGGGATCAGCAGAAGTCC+TGG | - | chr3.4:73462778-73462797 | MS.gene35485:intron | 55.0% | |
| GCCTTCAGCTCCAGTTGTAG+TGG | + | chr3.4:73462428-73462447 | None:intergenic | 55.0% | |
| GTCAACTGCTGGGATCTGGT+TGG | - | chr3.4:73461708-73461727 | MS.gene35485:CDS | 55.0% | |
| GTGGCCCTGAGTATGCTCTT+TGG | - | chr3.4:73461010-73461029 | MS.gene35485:intron | 55.0% | |
| TGGTCCATGTGTTGGGATGG+GGG | + | chr3.4:73458918-73458937 | None:intergenic | 55.0% | |
| TTGTCTGGCAAATCCCACGC+TGG | - | chr3.4:73461570-73461589 | MS.gene35485:intron | 55.0% | |
| ! | AGGGGCCAAAGAGCATACTC+AGG | + | chr3.4:73461018-73461037 | None:intergenic | 55.0% |
| ! | GGGGCCAAAGAGCATACTCA+GGG | + | chr3.4:73461017-73461036 | None:intergenic | 55.0% |
| CTACCCCCCATCCCAACACA+TGG | - | chr3.4:73458911-73458930 | MS.gene35485:CDS | 60.0% | |
| GGTCCATGTGTTGGGATGGG+GGG | + | chr3.4:73458917-73458936 | None:intergenic | 60.0% | |
| GGCAAATCCCACGCTGGTCC+TGG | - | chr3.4:73461576-73461595 | MS.gene35485:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 73457672 | 73462843 | 73457672 | ID=MS.gene35485 |
| chr3.4 | mRNA | 73457672 | 73462843 | 73457672 | ID=MS.gene35485.t1;Parent=MS.gene35485 |
| chr3.4 | exon | 73462812 | 73462843 | 73462812 | ID=MS.gene35485.t1.exon1;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73462812 | 73462843 | 73462812 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73462650 | 73462740 | 73462650 | ID=MS.gene35485.t1.exon2;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73462650 | 73462740 | 73462650 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73461869 | 73462051 | 73461869 | ID=MS.gene35485.t1.exon3;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73461869 | 73462051 | 73461869 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73461684 | 73461764 | 73461684 | ID=MS.gene35485.t1.exon4;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73461684 | 73461764 | 73461684 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73460805 | 73460870 | 73460805 | ID=MS.gene35485.t1.exon5;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73460805 | 73460870 | 73460805 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73460613 | 73460705 | 73460613 | ID=MS.gene35485.t1.exon6;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73460613 | 73460705 | 73460613 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73460287 | 73460412 | 73460287 | ID=MS.gene35485.t1.exon7;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73460287 | 73460412 | 73460287 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73459713 | 73459826 | 73459713 | ID=MS.gene35485.t1.exon8;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73459713 | 73459826 | 73459713 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73459510 | 73459605 | 73459510 | ID=MS.gene35485.t1.exon9;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73459510 | 73459605 | 73459510 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73459324 | 73459421 | 73459324 | ID=MS.gene35485.t1.exon10;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73459324 | 73459421 | 73459324 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73458846 | 73459246 | 73458846 | ID=MS.gene35485.t1.exon11;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73458846 | 73459246 | 73458846 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| chr3.4 | exon | 73457672 | 73458132 | 73457672 | ID=MS.gene35485.t1.exon12;Parent=MS.gene35485.t1 |
| chr3.4 | CDS | 73457672 | 73458132 | 73457672 | ID=cds.MS.gene35485.t1;Parent=MS.gene35485.t1 |
| Gene Sequence |
| Protein sequence |
