AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35901

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35901.t1 MTR_5g072860 93.111 450 29 1 20 469 18 465 0.0 868
MS.gene35901.t1 MTR_5g075440 56.140 456 192 4 16 469 6 455 0.0 521
MS.gene35901.t1 MTR_3g031400 54.212 463 188 9 10 469 8 449 1.34e-173 496
MS.gene35901.t1 MTR_3g031450 53.632 468 195 8 6 470 4 452 1.87e-172 493
MS.gene35901.t1 MTR_5g072810 50.216 462 216 7 12 470 4 454 1.72e-158 457
MS.gene35901.t1 MTR_5g072840 49.342 456 208 9 20 469 10 448 1.94e-151 439
MS.gene35901.t1 MTR_5g072820 49.675 461 201 10 20 470 10 449 3.85e-151 438
MS.gene35901.t1 MTR_5g072830 48.590 461 206 9 20 470 10 449 8.39e-150 435
MS.gene35901.t1 MTR_5g072850 47.137 454 162 9 16 469 6 381 2.48e-134 393
MS.gene35901.t1 MTR_6g014040 29.577 497 303 15 12 474 2 485 1.03e-61 209
MS.gene35901.t1 MTR_8g059425 30.675 489 289 16 20 474 10 482 2.77e-61 207
MS.gene35901.t1 MTR_6g014270 30.816 490 291 14 20 474 7 483 3.80e-61 207
MS.gene35901.t1 MTR_2g008210 30.722 485 300 16 16 474 7 481 4.10e-61 207
MS.gene35901.t1 MTR_3g008010 30.769 481 281 16 17 462 7 470 6.79e-60 204
MS.gene35901.t1 MTR_7g011470 32.008 478 275 15 20 469 10 465 6.05e-59 201
MS.gene35901.t1 MTR_0036s0220 30.266 489 291 18 14 469 6 477 1.64e-58 200
MS.gene35901.t1 MTR_6g014290 29.592 490 293 16 20 474 10 482 2.29e-58 200
MS.gene35901.t1 MTR_6g014200 30.849 483 288 15 20 469 7 476 2.51e-58 200
MS.gene35901.t1 MTR_6g013900 30.505 495 289 16 17 474 7 483 2.58e-58 200
MS.gene35901.t1 MTR_6g013960 28.776 490 299 15 20 474 10 484 6.66e-58 199
MS.gene35901.t1 MTR_6g011340 30.707 495 281 15 20 473 10 483 1.01e-57 198
MS.gene35901.t1 MTR_6g013440 29.979 487 295 15 20 473 11 484 1.11e-57 198
MS.gene35901.t1 MTR_5g464810 30.328 488 290 18 15 469 7 477 1.27e-57 198
MS.gene35901.t1 MTR_5g064240 30.328 488 290 18 15 469 7 477 1.27e-57 198
MS.gene35901.t1 MTR_0288s0020 28.803 493 276 14 20 474 10 465 1.75e-57 197
MS.gene35901.t1 MTR_6g014300 29.545 484 285 14 20 473 12 469 2.22e-57 197
MS.gene35901.t1 MTR_6g038240 30.277 469 283 15 20 469 11 454 2.36e-57 197
MS.gene35901.t1 MTR_5g035580 30.818 477 269 18 20 470 13 454 2.75e-57 197
MS.gene35901.t1 MTR_6g014020 30.123 488 295 15 20 474 10 484 4.48e-57 196
MS.gene35901.t1 MTR_6g013920 30.816 490 284 16 17 469 7 478 5.88e-57 196
MS.gene35901.t1 MTR_6g038300 29.550 467 292 12 20 470 11 456 2.73e-56 194
MS.gene35901.t1 MTR_8g088560 30.297 472 289 14 17 469 7 457 3.44e-56 194
MS.gene35901.t1 MTR_7g011470 31.381 478 274 15 20 469 10 461 3.51e-56 194
MS.gene35901.t1 MTR_3g069710 29.424 469 291 10 21 474 13 456 4.08e-56 193
MS.gene35901.t1 MTR_6g014150 30.943 488 291 15 20 474 7 481 4.42e-56 194
MS.gene35901.t1 MTR_6g014250 28.834 489 298 15 20 474 10 482 5.06e-56 194
MS.gene35901.t1 MTR_6g014170 30.390 487 277 17 20 474 10 466 1.46e-55 192
MS.gene35901.t1 MTR_6g014310 28.980 490 296 14 20 473 11 484 1.67e-55 192
MS.gene35901.t1 MTR_6g014220 29.132 484 293 15 20 469 10 477 1.76e-55 192
MS.gene35901.t1 MTR_6g014187 28.425 489 302 15 20 474 10 484 2.48e-55 192
MS.gene35901.t1 MTR_6g013450 29.098 488 299 13 20 473 10 484 3.22e-55 192
MS.gene35901.t1 MTR_6g013990 30.083 482 291 16 20 469 10 477 3.72e-55 191
MS.gene35901.t1 MTR_6g038220 28.842 475 283 13 20 470 11 454 4.78e-55 191
MS.gene35901.t1 MTR_6g014050 30.285 492 289 16 20 474 11 485 5.58e-55 191
MS.gene35901.t1 MTR_3g479520 29.774 487 298 14 20 475 15 488 7.54e-55 191
MS.gene35901.t1 MTR_5g464760 29.046 482 296 16 20 469 12 479 8.28e-55 191
MS.gene35901.t1 MTR_5g058320 29.959 484 284 15 20 473 10 468 1.49e-54 189
MS.gene35901.t1 MTR_4g094220 29.435 513 277 19 1 466 1 475 2.43e-54 189
MS.gene35901.t1 MTR_7g080940 30.361 471 278 16 20 469 11 452 3.53e-54 188
MS.gene35901.t1 MTR_3g479490 29.106 481 297 14 20 469 6 473 5.24e-54 188
MS.gene35901.t1 MTR_7g080950 28.358 469 292 15 19 469 5 447 1.23e-53 187
MS.gene35901.t1 MTR_3g079480 29.536 474 290 14 20 462 21 481 2.49e-53 187
MS.gene35901.t1 MTR_5g035560 29.645 479 270 18 20 469 11 451 8.47e-53 186
MS.gene35901.t1 MTR_6g038230 28.511 470 294 15 19 470 10 455 1.16e-52 184
MS.gene35901.t1 MTR_7g080900 28.632 475 297 15 13 469 5 455 2.63e-52 183
MS.gene35901.t1 MTR_6g014240 28.870 478 274 14 20 469 7 446 8.90e-52 182
MS.gene35901.t1 MTR_1g107380 27.778 486 289 14 20 469 13 472 3.23e-51 181
MS.gene35901.t1 MTR_6g038200 28.390 472 294 14 18 470 9 455 5.18e-51 180
MS.gene35901.t1 MTR_8g083290 28.541 473 300 12 21 469 5 463 1.15e-50 179
MS.gene35901.t1 MTR_8g083280 28.395 486 279 12 21 469 8 461 2.75e-50 178
MS.gene35901.t1 MTR_3g084520 28.743 501 284 17 20 475 6 478 2.88e-50 178
MS.gene35901.t1 MTR_3g069690 26.809 470 304 10 16 469 4 449 6.92e-50 177
MS.gene35901.t1 MTR_5g098930 27.160 486 293 13 21 469 6 467 1.13e-49 176
MS.gene35901.t1 MTR_4g094920 28.785 469 298 14 21 469 27 479 1.37e-48 174
MS.gene35901.t1 MTR_7g080935 29.263 475 286 15 16 469 7 452 1.38e-48 173
MS.gene35901.t1 MTR_4g095008 28.184 479 296 18 17 469 8 464 2.52e-48 174
MS.gene35901.t1 MTR_4g064987 28.964 473 280 14 21 469 9 449 2.95e-48 172
MS.gene35901.t1 MTR_3g049970 27.902 491 283 16 20 469 9 469 7.21e-48 172
MS.gene35901.t1 MTR_8g064870 28.485 495 287 14 15 469 6 473 1.82e-47 171
MS.gene35901.t1 MTR_7g102460 27.664 488 303 12 20 469 9 484 1.07e-46 169
MS.gene35901.t1 MTR_7g013240 28.540 459 288 13 20 466 6 436 1.35e-46 167
MS.gene35901.t1 MTR_0184s0040 28.866 485 267 16 18 458 19 469 1.37e-46 168
MS.gene35901.t1 MTR_0078s0190 28.866 485 267 16 18 458 19 469 1.37e-46 168
MS.gene35901.t1 MTR_5g016480 26.915 483 312 15 14 469 2 470 2.57e-46 167
MS.gene35901.t1 MTR_1g107360 29.363 487 275 16 20 470 9 462 2.58e-46 167
MS.gene35901.t1 MTR_7g102490 27.218 496 299 14 19 469 8 486 6.22e-46 167
MS.gene35901.t1 MTR_5g031840 27.119 472 311 12 18 469 3 461 6.61e-46 166
MS.gene35901.t1 MTR_8g009050 27.743 483 284 16 18 462 4 459 6.97e-46 166
MS.gene35901.t1 MTR_2g040530 26.639 488 300 14 17 470 2 465 1.61e-45 165
MS.gene35901.t1 MTR_7g013200 28.571 462 285 12 20 466 5 436 2.11e-45 164
MS.gene35901.t1 MTR_4g064987 28.330 473 277 14 21 469 9 443 2.87e-45 164
MS.gene35901.t1 MTR_1g107350 27.579 475 305 16 20 469 8 468 3.39e-45 164
MS.gene35901.t1 MTR_3g479470 28.151 476 301 15 20 466 13 476 5.43e-45 164
MS.gene35901.t1 MTR_0078s0010 28.337 487 276 17 18 462 4 459 6.89e-45 164
MS.gene35901.t1 MTR_1g107375 28.571 469 305 14 14 469 2 453 1.88e-44 162
MS.gene35901.t1 MTR_7g117170 28.571 497 284 15 2 462 7 468 2.11e-44 162
MS.gene35901.t1 MTR_7g055710 27.386 482 295 14 20 462 11 476 2.14e-44 162
MS.gene35901.t1 MTR_5g031830 27.586 493 298 13 11 469 3 470 2.32e-44 162
MS.gene35901.t1 MTR_7g070610 28.690 481 291 17 20 462 13 479 2.32e-44 162
MS.gene35901.t1 MTR_3g084530 27.366 486 298 18 20 469 6 472 2.67e-44 162
MS.gene35901.t1 MTR_5g070090 29.730 481 297 20 11 470 2 462 2.77e-44 162
MS.gene35901.t1 MTR_7g013260 28.785 469 282 16 20 471 6 439 3.23e-44 161
MS.gene35901.t1 MTR_8g009055 28.184 479 287 14 18 462 4 459 3.42e-44 162
MS.gene35901.t1 MTR_3g084540 28.106 491 295 19 20 472 6 476 3.44e-44 162
MS.gene35901.t1 MTR_8g064880 30.512 449 249 15 20 427 9 435 3.77e-44 162
MS.gene35901.t1 MTR_8g043470 27.273 418 237 8 75 474 14 382 3.90e-44 159
MS.gene35901.t1 MTR_8g008990 28.216 482 285 13 18 462 4 461 4.35e-44 161
MS.gene35901.t1 MTR_1g107365 27.824 478 286 16 20 469 45 491 7.84e-44 161
MS.gene35901.t1 MTR_8g465670 27.273 484 294 12 19 466 6 467 1.04e-43 160
MS.gene35901.t1 MTR_1g062380 26.848 514 300 16 12 473 8 497 2.11e-43 160
MS.gene35901.t1 MTR_1g107315 26.543 486 306 15 15 469 3 468 2.37e-43 159
MS.gene35901.t1 MTR_7g013180 28.571 462 281 16 20 460 5 438 2.96e-43 159
MS.gene35901.t1 MTR_4g485630 27.846 492 300 18 13 469 2 473 3.78e-43 159
MS.gene35901.t1 MTR_8g077590 28.986 483 273 14 15 458 4 455 8.97e-43 158
MS.gene35901.t1 MTR_7g070660 27.273 484 303 16 20 469 11 479 1.01e-42 158
MS.gene35901.t1 MTR_5g031860 26.964 471 310 11 20 469 12 469 1.43e-42 157
MS.gene35901.t1 MTR_7g117405 26.613 496 291 15 20 469 12 480 1.63e-42 157
MS.gene35901.t1 MTR_7g070940 26.653 484 307 14 14 466 3 469 2.83e-42 157
MS.gene35901.t1 MTR_7g047030 28.778 483 271 18 18 458 4 455 3.17e-42 156
MS.gene35901.t1 MTR_7g047270 28.778 483 271 18 18 458 4 455 3.17e-42 156
MS.gene35901.t1 MTR_8g006730 27.902 491 277 16 19 465 5 462 3.30e-42 156
MS.gene35901.t1 MTR_8g027885 27.651 481 275 15 21 462 19 465 3.90e-42 156
MS.gene35901.t1 MTR_8g006710 28.425 489 272 19 21 465 7 461 4.05e-42 156
MS.gene35901.t1 MTR_4g024020 26.946 501 303 16 20 474 9 492 4.38e-42 156
MS.gene35901.t1 MTR_8g009063 27.235 481 295 13 18 465 11 469 4.63e-42 156
MS.gene35901.t1 MTR_7g070800 28.243 478 293 16 20 462 6 468 4.84e-42 156
MS.gene35901.t1 MTR_8g066610 27.551 490 288 15 20 466 9 474 6.95e-42 155
MS.gene35901.t1 MTR_5g090580 26.518 494 275 15 19 458 4 463 8.52e-42 155
MS.gene35901.t1 MTR_7g013220 27.991 468 291 13 20 466 5 447 9.66e-42 154
MS.gene35901.t1 MTR_1g032490 27.122 483 309 16 20 475 10 476 1.43e-41 154
MS.gene35901.t1 MTR_1g029540 27.119 472 288 16 25 470 19 460 1.66e-41 154
MS.gene35901.t1 MTR_3g009510 26.915 483 297 14 19 462 4 469 2.11e-41 154
MS.gene35901.t1 MTR_7g070860 28.387 465 295 15 20 462 7 455 2.31e-41 154
MS.gene35901.t1 MTR_8g027870 27.975 479 268 16 21 458 19 461 3.59e-41 154
MS.gene35901.t1 MTR_0184s0030 27.426 474 290 13 18 458 4 456 3.97e-41 153
MS.gene35901.t1 MTR_1g107285 27.778 468 306 12 21 469 9 463 4.51e-41 153
MS.gene35901.t1 MTR_7g070780 27.459 488 301 17 20 469 11 483 1.86e-40 152
MS.gene35901.t1 MTR_7g102450 25.859 495 298 14 20 474 11 476 3.02e-40 151
MS.gene35901.t1 MTR_1g019510 27.902 491 270 15 18 462 4 456 4.51e-40 150
MS.gene35901.t1 MTR_8g009073 28.631 482 269 15 18 457 4 452 4.64e-40 150
MS.gene35901.t1 MTR_4g031800 25.600 500 315 14 14 476 3 482 4.94e-40 150
MS.gene35901.t1 MTR_7g071040 27.027 481 299 15 20 462 17 483 5.24e-40 150
MS.gene35901.t1 MTR_5g045970 25.769 520 301 14 13 476 9 499 5.35e-40 150
MS.gene35901.t1 MTR_8g006220 26.559 497 290 13 19 466 5 475 7.14e-39 147
MS.gene35901.t1 MTR_4g008630 28.099 484 279 18 21 470 15 463 9.68e-39 146
MS.gene35901.t1 MTR_2g046750 25.458 491 303 14 17 470 2 466 1.01e-38 146
MS.gene35901.t1 MTR_5g045960 25.344 509 307 13 16 474 5 490 1.21e-38 147
MS.gene35901.t1 MTR_3g479610 30.744 309 184 8 180 469 15 312 1.51e-38 142
MS.gene35901.t1 MTR_4g108250 25.364 481 310 11 20 462 11 480 1.97e-38 146
MS.gene35901.t1 MTR_5g090670 25.440 511 287 15 19 471 4 478 2.04e-38 146
MS.gene35901.t1 MTR_0078s0060 26.419 511 280 16 18 475 4 471 2.24e-38 145
MS.gene35901.t1 MTR_7g046490 34.202 307 153 11 186 462 169 456 2.46e-38 145
MS.gene35901.t1 MTR_2g046820 24.646 495 299 14 17 470 2 463 2.51e-38 145
MS.gene35901.t1 MTR_7g070810 24.649 499 317 14 14 474 3 480 4.15e-38 145
MS.gene35901.t1 MTR_6g005600 27.966 472 292 12 17 458 3 456 4.36e-38 145
MS.gene35901.t1 MTR_5g090660 24.798 496 299 14 19 470 4 469 4.38e-38 146
MS.gene35901.t1 MTR_8g012635 27.607 489 288 16 18 465 4 467 5.65e-38 144
MS.gene35901.t1 MTR_6g033625 26.681 476 284 14 21 458 5 453 6.79e-38 144
MS.gene35901.t1 MTR_7g102560 25.813 492 306 15 20 469 9 483 6.89e-38 144
MS.gene35901.t1 MTR_5g090620 24.641 487 302 15 19 462 4 468 1.13e-37 144
MS.gene35901.t1 MTR_6g023665 25.813 492 300 13 11 465 4 467 1.24e-37 144
MS.gene35901.t1 MTR_7g070910 26.625 477 306 13 20 462 11 477 1.98e-37 143
MS.gene35901.t1 MTR_5g090700 24.641 487 295 15 19 458 4 465 3.21e-37 142
MS.gene35901.t1 MTR_8g008970 27.883 477 289 13 18 462 4 457 3.41e-37 145
MS.gene35901.t1 MTR_8g008970 31.518 257 158 6 214 462 535 781 1.27e-26 114
MS.gene35901.t1 MTR_0536s0020 26.939 490 288 18 21 469 19 479 3.44e-37 142
MS.gene35901.t1 MTR_7g070930 26.380 489 312 13 10 462 4 480 4.79e-37 142
MS.gene35901.t1 MTR_7g070740 26.708 483 297 16 20 462 11 476 1.01e-36 141
MS.gene35901.t1 MTR_8g009073 32.881 295 164 7 186 457 40 323 1.62e-36 137
MS.gene35901.t1 MTR_8g012745 26.694 487 292 15 18 465 4 464 1.77e-36 140
MS.gene35901.t1 MTR_5g090600 24.947 469 315 11 19 469 4 453 2.79e-36 139
MS.gene35901.t1 MTR_5g070040 26.653 484 273 17 19 458 10 455 2.88e-36 140
MS.gene35901.t1 MTR_4g485620 28.718 390 247 12 107 475 84 463 3.45e-36 139
MS.gene35901.t1 MTR_8g012650 29.744 390 205 14 123 469 111 474 4.26e-36 139
MS.gene35901.t1 MTR_8g009067 31.250 304 175 7 186 466 51 343 4.53e-36 137
MS.gene35901.t1 MTR_6g033725 25.306 490 284 14 21 465 5 457 7.50e-36 139
MS.gene35901.t1 MTR_8g009067 31.250 304 175 7 186 466 169 461 8.67e-36 138
MS.gene35901.t1 MTR_7g102520 25.150 501 318 15 11 469 3 488 1.49e-35 138
MS.gene35901.t1 MTR_5g090630 25.159 473 299 12 19 458 4 454 2.58e-35 137
MS.gene35901.t1 MTR_6g014190 29.153 295 182 8 191 469 3 286 2.69e-35 133
MS.gene35901.t1 MTR_7g102550 25.455 495 314 16 13 466 2 482 3.44e-35 137
MS.gene35901.t1 MTR_8g074550 25.948 501 288 15 19 462 7 481 6.68e-35 137
MS.gene35901.t1 MTR_4g117960 24.696 494 310 18 24 476 15 487 1.03e-34 135
MS.gene35901.t1 MTR_4g118000 25.104 482 294 15 24 469 16 466 2.64e-34 134
MS.gene35901.t1 MTR_8g090095 24.948 481 296 13 25 470 30 480 2.84e-34 134
MS.gene35901.t1 MTR_0536s0010 24.699 498 311 16 11 473 12 480 2.91e-34 134
MS.gene35901.t1 MTR_0477s0010 26.891 357 208 7 133 474 3 321 3.62e-34 131
MS.gene35901.t1 MTR_6g033660 25.786 477 296 13 21 463 5 457 3.88e-34 134
MS.gene35901.t1 MTR_6g013680 27.273 429 235 15 68 473 4 378 5.16e-34 132
MS.gene35901.t1 MTR_0891s0010 29.293 297 180 8 192 469 4 289 8.53e-34 129
MS.gene35901.t1 MTR_4g117950 25.773 485 289 15 24 469 10 462 1.09e-33 132
MS.gene35901.t1 MTR_5g019580 25.255 491 293 13 20 462 7 471 1.15e-33 133
MS.gene35901.t1 MTR_6g033615 26.509 464 286 14 21 458 5 439 2.17e-33 131
MS.gene35901.t1 MTR_5g019580 25.255 491 279 14 13 462 52 495 2.24e-33 132
MS.gene35901.t1 MTR_6g014186 24.638 483 280 14 20 469 7 438 2.26e-33 131
MS.gene35901.t1 MTR_6g488280 31.890 254 139 6 234 465 219 460 6.75e-33 130
MS.gene35901.t1 MTR_0428s0010 31.890 254 139 6 234 465 219 460 6.75e-33 130
MS.gene35901.t1 MTR_5g098960 27.674 430 274 15 21 429 8 421 8.74e-33 130
MS.gene35901.t1 MTR_8g012730 36.771 223 109 6 261 457 80 296 1.06e-32 127
MS.gene35901.t1 MTR_6g014160 27.647 340 191 12 76 388 47 358 2.43e-32 127
MS.gene35901.t1 MTR_5g090610 23.457 486 312 11 19 471 4 462 3.17e-32 128
MS.gene35901.t1 MTR_6g033675 23.780 492 292 13 21 465 5 460 3.62e-32 128
MS.gene35901.t1 MTR_8g466240 26.763 482 291 17 14 466 2 450 8.18e-32 127
MS.gene35901.t1 MTR_5g087620 25.349 501 298 17 14 461 4 481 1.09e-31 127
MS.gene35901.t1 MTR_8g006260 28.962 366 219 11 124 465 114 462 1.26e-31 127
MS.gene35901.t1 MTR_6g035295 23.859 482 310 14 21 462 13 477 1.67e-31 127
MS.gene35901.t1 MTR_5g016660 25.996 477 305 14 22 462 12 476 1.75e-31 127
MS.gene35901.t1 MTR_8g006270 28.496 379 216 13 114 458 95 452 3.46e-31 125
MS.gene35901.t1 MTR_5g067170 26.653 484 292 18 24 466 15 476 3.51e-31 125
MS.gene35901.t1 MTR_0009s0240 23.591 479 314 13 15 466 2 455 3.77e-31 125
MS.gene35901.t1 MTR_8g012630 35.211 213 107 5 279 465 204 411 4.26e-31 124
MS.gene35901.t1 MTR_8g007585 32.850 207 122 3 277 474 198 396 4.91e-31 124
MS.gene35901.t1 MTR_8g007585 26.486 185 121 6 19 190 9 191 8.12e-12 67.4
MS.gene35901.t1 MTR_8g068330 25.612 449 296 14 20 444 8 442 5.50e-31 125
MS.gene35901.t1 MTR_4g117890 25.207 484 298 16 21 466 14 471 6.35e-31 125
MS.gene35901.t1 MTR_8g032950 28.777 278 169 7 220 469 204 480 8.53e-31 124
MS.gene35901.t1 MTR_8g044140 25.986 431 256 16 77 466 37 445 2.87e-30 123
MS.gene35901.t1 MTR_8g007650 24.835 455 299 12 15 443 2 439 3.84e-30 122
MS.gene35901.t1 MTR_7g012120 35.514 214 113 5 273 462 264 476 4.02e-30 122
MS.gene35901.t1 MTR_6g035185 25.051 487 305 16 24 469 15 482 4.10e-30 122
MS.gene35901.t1 MTR_4g485640 30.970 268 150 9 227 466 403 663 5.40e-30 124
MS.gene35901.t1 MTR_2g035040 26.992 389 229 11 124 476 24 393 7.92e-30 120
MS.gene35901.t1 MTR_4g082820 24.949 493 289 17 18 466 5 460 9.96e-30 121
MS.gene35901.t1 MTR_1g019520 32.710 214 112 5 277 465 2 208 1.20e-29 115
MS.gene35901.t1 MTR_2g035020 32.922 243 136 6 250 466 237 478 1.32e-29 121
MS.gene35901.t1 MTR_8g007565 24.615 455 300 12 15 443 2 439 1.66e-29 120
MS.gene35901.t1 MTR_2g059240 24.048 499 281 17 20 466 13 465 1.81e-29 120
MS.gene35901.t1 MTR_8g071070 24.641 487 309 17 15 466 2 465 2.65e-29 120
MS.gene35901.t1 MTR_4g117980 33.028 218 121 5 276 469 265 481 3.61e-29 120
MS.gene35901.t1 MTR_4g128720 22.129 479 308 12 20 470 15 456 6.54e-29 119
MS.gene35901.t1 MTR_6g078320 24.341 493 312 16 11 463 2 473 2.49e-28 117
MS.gene35901.t1 MTR_4g082810 26.887 424 243 17 18 400 5 402 2.72e-28 116
MS.gene35901.t1 MTR_5g029800 24.696 494 293 19 24 469 15 477 1.19e-27 115
MS.gene35901.t1 MTR_2g034990 25.720 486 296 19 24 466 15 478 2.04e-27 115
MS.gene35901.t1 MTR_1g040310 23.029 482 326 15 17 466 12 480 4.97e-27 114
MS.gene35901.t1 MTR_2g098430 23.541 497 302 17 21 466 7 476 5.02e-27 114
MS.gene35901.t1 MTR_5g039900 25.199 377 233 9 118 462 117 476 6.05e-27 114
MS.gene35901.t1 MTR_6g035265 31.441 229 121 9 277 475 257 479 6.59e-27 113
MS.gene35901.t1 MTR_4g485590 25.728 412 238 11 18 401 7 378 7.78e-27 112
MS.gene35901.t1 MTR_8g068360 25.708 424 258 16 20 410 12 411 2.14e-26 112
MS.gene35901.t1 MTR_5g072825 53.608 97 37 3 16 112 6 94 2.96e-26 102
MS.gene35901.t1 MTR_7g067120 24.318 440 280 15 20 447 9 407 3.01e-26 110
MS.gene35901.t1 MTR_7g080960 33.333 222 99 5 252 469 294 470 5.40e-26 110
MS.gene35901.t1 MTR_2g008225 24.499 449 299 16 20 447 15 444 9.29e-26 110
MS.gene35901.t1 MTR_7g071050 35.204 196 105 5 277 452 229 422 1.57e-25 108
MS.gene35901.t1 MTR_7g070870 23.482 494 302 17 14 474 13 463 2.46e-25 108
MS.gene35901.t1 MTR_7g039550 28.302 265 146 7 230 462 2 254 5.38e-25 104
MS.gene35901.t1 MTR_4g123553 22.902 441 311 13 20 447 15 439 1.62e-24 106
MS.gene35901.t1 MTR_2g008220 24.396 455 292 16 20 447 14 443 2.24e-24 105
MS.gene35901.t1 MTR_5g004940 32.843 204 105 4 277 469 195 377 3.30e-24 104
MS.gene35901.t1 MTR_4g128690 21.962 469 318 15 20 470 15 453 4.73e-24 104
MS.gene35901.t1 MTR_2086s0010 30.726 179 106 3 301 469 1 171 5.78e-24 99.0
MS.gene35901.t1 MTR_1996s0010 30.726 179 106 3 301 469 1 171 5.78e-24 99.0
MS.gene35901.t1 MTR_5g066410 23.043 447 284 12 24 443 2 415 5.91e-24 104
MS.gene35901.t1 MTR_5g040030 27.174 276 155 7 221 462 217 480 1.26e-23 103
MS.gene35901.t1 MTR_7g470610 28.992 238 138 6 210 420 59 292 1.51e-23 100
MS.gene35901.t1 MTR_7g070583 28.992 238 138 6 210 420 59 292 1.51e-23 100
MS.gene35901.t1 MTR_5g027210 23.457 486 284 15 18 444 2 458 3.31e-23 102
MS.gene35901.t1 MTR_7g067330 24.605 443 275 17 20 447 9 407 3.89e-23 102
MS.gene35901.t1 MTR_8g068340 24.336 452 290 16 20 438 12 444 4.64e-22 99.0
MS.gene35901.t1 MTR_8g009840 31.628 215 113 8 276 462 310 518 6.43e-22 99.0
MS.gene35901.t1 MTR_6g036650 23.128 454 301 18 20 447 18 449 3.30e-21 96.7
MS.gene35901.t1 MTR_5g066390 30.488 164 97 3 320 474 64 219 3.69e-21 92.0
MS.gene35901.t1 MTR_2g046620 22.588 456 294 17 20 447 16 440 9.61e-21 95.1
MS.gene35901.t1 MTR_3g009490 32.022 178 94 5 305 458 3 177 1.16e-20 90.1
MS.gene35901.t1 MTR_1g107325 28.365 208 122 4 270 469 164 352 1.22e-20 93.6
MS.gene35901.t1 MTR_1g090270 22.122 443 300 9 20 439 15 435 1.53e-20 94.4
MS.gene35901.t1 MTR_7g070995 37.594 133 74 3 338 462 6 137 2.01e-20 88.2
MS.gene35901.t1 MTR_4g077960 23.448 435 296 14 30 447 2 416 4.13e-20 92.8
MS.gene35901.t1 MTR_7g070760 29.744 195 99 4 221 401 28 198 5.91e-19 85.5
MS.gene35901.t1 MTR_6g042310 22.059 476 316 20 18 469 16 460 7.26e-19 89.4
MS.gene35901.t1 MTR_6g014185 26.894 264 145 10 220 472 121 347 1.17e-18 87.8
MS.gene35901.t1 MTR_2g008226 28.000 225 141 7 233 446 233 447 6.44e-18 86.7
MS.gene35901.t1 MTR_6g014000 31.783 129 80 2 337 465 31 151 1.04e-17 85.9
MS.gene35901.t1 MTR_4g059370 24.671 304 199 7 151 439 74 362 1.70e-17 84.7
MS.gene35901.t1 MTR_0078s0200 25.392 319 210 8 18 325 4 305 2.91e-17 82.8
MS.gene35901.t1 MTR_8g056740 31.138 167 103 3 275 433 164 326 3.81e-17 83.6
MS.gene35901.t1 MTR_0536s0030 31.447 159 91 5 327 469 195 351 4.77e-17 82.8
MS.gene35901.t1 MTR_3g435310 30.286 175 110 5 281 447 228 398 7.68e-17 82.8
MS.gene35901.t1 MTR_5g090690 27.723 202 103 4 250 430 166 345 9.53e-16 79.3
MS.gene35901.t1 MTR_2g083490 24.295 461 290 20 17 447 5 436 1.76e-15 79.0
MS.gene35901.t1 MTR_6g014195 31.720 186 108 7 20 188 10 193 9.46e-15 73.6
MS.gene35901.t1 MTR_2g083380 24.078 461 291 19 17 447 22 453 1.10e-14 76.6
MS.gene35901.t1 MTR_4g079270 23.431 239 163 4 220 447 207 436 1.79e-14 75.9
MS.gene35901.t1 MTR_4g079250 21.842 467 300 16 14 447 2 436 7.19e-14 73.9
MS.gene35901.t1 MTR_8g006230 28.230 209 126 7 125 326 55 246 2.21e-13 70.9
MS.gene35901.t1 MTR_0199s0010 27.225 191 124 6 19 196 9 197 2.29e-13 70.9
MS.gene35901.t1 MTR_2g014900 20.507 434 295 15 20 428 7 415 2.47e-13 72.4
MS.gene35901.t1 MTR_3g479620 30.061 163 105 5 20 175 6 166 4.98e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35901.t1 AT2G30150 51.261 476 207 9 1 472 1 455 1.76e-164 473
MS.gene35901.t1 AT2G30150 52.318 453 198 8 24 472 1 439 8.38e-162 465
MS.gene35901.t1 AT2G30140 50.947 475 205 10 1 470 1 452 8.54e-158 455
MS.gene35901.t1 AT2G30140 50.947 475 204 10 1 470 1 451 2.59e-157 454
MS.gene35901.t1 AT2G36970 28.690 481 292 14 20 469 10 470 1.15e-62 211
MS.gene35901.t1 AT1G78270 29.939 491 304 16 14 475 7 486 1.25e-60 206
MS.gene35901.t1 AT2G28080 29.095 464 291 11 24 466 22 468 5.42e-60 204
MS.gene35901.t1 AT1G05675 28.723 470 288 12 19 466 5 449 1.49e-59 202
MS.gene35901.t1 AT1G05680 29.211 469 287 12 19 466 5 449 3.67e-59 201
MS.gene35901.t1 AT1G22360 30.083 482 291 17 20 469 10 477 3.78e-59 202
MS.gene35901.t1 AT2G31750 30.898 479 284 15 19 476 7 459 4.24e-59 202
MS.gene35901.t1 AT2G31750 30.655 473 283 14 19 470 7 455 4.75e-59 201
MS.gene35901.t1 AT1G22400 29.485 485 285 16 20 466 13 478 1.18e-58 201
MS.gene35901.t1 AT1G22340 30.020 493 283 17 20 469 13 486 1.14e-56 196
MS.gene35901.t1 AT1G22380 30.943 488 284 17 20 469 13 485 1.68e-56 195
MS.gene35901.t1 AT2G43840 29.019 479 272 15 20 469 7 446 6.44e-55 190
MS.gene35901.t1 AT2G43840 29.019 479 272 15 20 469 7 446 1.11e-54 189
MS.gene35901.t1 AT4G01070 28.125 480 289 13 16 462 4 460 1.46e-54 190
MS.gene35901.t1 AT5G38040 28.664 464 277 13 28 469 18 449 2.89e-54 188
MS.gene35901.t1 AT1G22360 29.253 482 283 17 20 469 10 465 5.20e-54 188
MS.gene35901.t1 AT5G05900 30.932 472 276 14 21 472 9 450 5.51e-54 187
MS.gene35901.t1 AT3G46660 28.942 463 287 14 21 466 15 452 2.96e-53 186
MS.gene35901.t1 AT2G43820 29.574 470 281 15 20 469 7 446 4.83e-53 185
MS.gene35901.t1 AT3G46670 28.139 462 290 13 21 466 10 445 7.80e-53 184
MS.gene35901.t1 AT4G15480 27.754 472 301 13 20 466 19 475 8.77e-53 185
MS.gene35901.t1 AT1G22370 28.953 487 301 14 12 469 5 475 1.29e-52 184
MS.gene35901.t1 AT5G59580 28.755 466 289 13 20 469 9 447 1.83e-52 184
MS.gene35901.t1 AT3G21560 27.551 490 309 16 4 469 5 472 4.74e-52 183
MS.gene35901.t1 AT3G11340 28.541 473 290 13 14 469 3 444 3.06e-51 180
MS.gene35901.t1 AT5G38010 27.719 469 295 11 20 469 10 453 3.33e-51 180
MS.gene35901.t1 AT4G15490 28.782 476 300 17 19 470 7 467 5.11e-51 180
MS.gene35901.t1 AT5G59590 27.872 470 291 11 19 469 9 449 5.70e-51 179
MS.gene35901.t1 AT4G15500 27.254 488 303 14 16 475 5 468 1.77e-50 179
MS.gene35901.t1 AT1G01420 28.216 482 281 15 18 462 6 459 1.62e-49 176
MS.gene35901.t1 AT1G01420 28.216 482 281 15 18 462 9 462 1.70e-49 176
MS.gene35901.t1 AT1G05560 28.243 478 284 15 20 469 5 451 1.11e-48 174
MS.gene35901.t1 AT2G36800 28.346 508 292 17 11 469 3 487 1.52e-48 174
MS.gene35901.t1 AT1G05560 28.243 478 284 15 20 469 55 501 2.65e-48 174
MS.gene35901.t1 AT3G46680 27.897 466 289 14 20 466 9 446 5.29e-47 169
MS.gene35901.t1 AT4G15550 28.157 483 292 14 17 466 10 470 5.57e-47 169
MS.gene35901.t1 AT2G31790 28.330 473 294 16 20 470 8 457 8.17e-47 168
MS.gene35901.t1 AT1G10400 27.966 472 290 16 19 462 6 455 9.02e-47 169
MS.gene35901.t1 AT2G36750 27.545 501 295 17 20 474 10 488 1.05e-46 169
MS.gene35901.t1 AT1G24100 27.651 481 298 13 13 469 4 458 3.08e-46 167
MS.gene35901.t1 AT3G02100 29.274 468 299 16 20 474 13 461 4.08e-46 167
MS.gene35901.t1 AT2G36780 26.892 502 292 18 18 469 12 488 7.61e-45 164
MS.gene35901.t1 AT3G21790 26.316 494 303 14 20 470 4 479 1.04e-44 164
MS.gene35901.t1 AT2G23250 28.419 468 283 17 21 469 1 435 1.22e-44 162
MS.gene35901.t1 AT4G15280 24.242 495 305 11 20 469 4 473 2.51e-44 162
MS.gene35901.t1 AT4G15280 24.242 495 305 11 20 469 36 505 4.74e-44 162
MS.gene35901.t1 AT2G23260 28.017 464 304 16 19 470 9 454 5.67e-44 160
MS.gene35901.t1 AT3G46720 28.665 457 286 12 21 466 10 437 6.32e-44 160
MS.gene35901.t1 AT3G21800 26.585 489 302 13 21 470 6 476 2.91e-43 159
MS.gene35901.t1 AT5G05890 28.361 476 286 11 20 470 8 453 3.24e-43 159
MS.gene35901.t1 AT2G26480 26.247 461 304 10 21 469 9 445 8.23e-43 157
MS.gene35901.t1 AT5G05870 28.361 476 292 9 20 472 8 457 8.40e-43 158
MS.gene35901.t1 AT3G46690 27.948 458 291 13 20 462 9 442 9.02e-43 157
MS.gene35901.t1 AT5G05880 28.270 474 285 14 20 470 8 449 9.13e-43 157
MS.gene35901.t1 AT3G46700 25.813 461 306 10 20 469 9 444 9.78e-43 157
MS.gene35901.t1 AT3G46650 26.522 460 281 12 21 465 11 428 1.05e-42 157
MS.gene35901.t1 AT3G21780 27.105 487 298 15 20 470 4 469 1.80e-42 157
MS.gene35901.t1 AT2G36770 25.249 503 295 14 20 469 14 488 8.13e-42 155
MS.gene35901.t1 AT2G29730 25.051 487 309 14 19 473 4 466 8.22e-42 155
MS.gene35901.t1 AT3G21760 26.243 503 294 14 20 470 4 481 8.26e-42 155
MS.gene35901.t1 AT2G16890 27.856 499 285 20 13 469 2 467 8.40e-42 155
MS.gene35901.t1 AT1G01390 28.482 481 290 13 18 466 6 464 1.18e-41 155
MS.gene35901.t1 AT1G01390 28.482 481 290 13 18 466 23 481 1.86e-41 155
MS.gene35901.t1 AT1G05530 26.294 483 290 13 20 469 5 454 2.67e-41 153
MS.gene35901.t1 AT2G29740 27.495 491 293 16 19 469 7 474 2.78e-41 154
MS.gene35901.t1 AT3G21750 24.330 485 316 11 19 470 3 469 5.59e-41 153
MS.gene35901.t1 AT2G36790 28.195 493 293 18 20 469 13 487 8.92e-41 153
MS.gene35901.t1 AT2G36760 25.553 497 313 16 20 476 14 493 9.34e-40 150
MS.gene35901.t1 AT2G29750 27.778 486 297 16 19 469 7 473 9.96e-40 149
MS.gene35901.t1 AT2G29710 25.309 486 301 16 19 469 4 462 1.05e-39 149
MS.gene35901.t1 AT3G53150 25.097 518 320 12 5 469 7 509 1.37e-39 150
MS.gene35901.t1 AT5G14860 26.531 490 310 16 14 469 2 475 2.44e-39 149
MS.gene35901.t1 AT5G05860 27.292 469 292 12 20 469 9 447 6.04e-39 147
MS.gene35901.t1 AT2G15480 26.305 498 296 20 20 466 10 487 5.25e-38 145
MS.gene35901.t1 AT2G16890 28.414 454 253 18 13 425 2 424 1.69e-37 142
MS.gene35901.t1 AT2G15490 25.720 486 304 17 20 466 7 474 2.42e-37 143
MS.gene35901.t1 AT2G15480 26.531 490 295 20 20 466 10 477 2.78e-37 143
MS.gene35901.t1 AT3G53160 25.866 491 307 18 20 469 8 482 3.31e-37 143
MS.gene35901.t1 AT5G26310 25.562 489 289 17 17 462 4 460 4.17e-37 142
MS.gene35901.t1 AT2G15490 25.562 489 304 17 20 466 7 477 9.72e-37 141
MS.gene35901.t1 AT1G07250 30.769 351 210 12 137 469 137 472 1.02e-36 141
MS.gene35901.t1 AT1G07260 26.122 490 300 15 19 469 5 471 1.27e-36 141
MS.gene35901.t1 AT3G50740 24.897 486 291 12 17 457 4 460 1.30e-36 141
MS.gene35901.t1 AT3G55700 24.204 471 306 13 21 469 9 450 2.96e-36 139
MS.gene35901.t1 AT4G34131 27.218 496 291 20 20 470 10 480 3.45e-36 140
MS.gene35901.t1 AT4G34138 25.896 502 310 18 12 473 3 482 1.63e-35 138
MS.gene35901.t1 AT3G55710 24.684 474 304 15 21 469 9 454 3.04e-35 137
MS.gene35901.t1 AT5G17050 23.591 479 317 13 16 472 8 459 7.01e-35 135
MS.gene35901.t1 AT4G15260 25.806 372 217 9 134 469 6 354 3.08e-34 132
MS.gene35901.t1 AT5G03490 26.778 478 293 18 9 460 8 454 4.10e-34 134
MS.gene35901.t1 AT2G18570 25.780 481 293 12 20 462 5 459 4.13e-34 134
MS.gene35901.t1 AT5G66690 24.795 488 284 16 17 458 4 454 1.47e-32 129
MS.gene35901.t1 AT4G14090 25.427 468 300 16 20 466 13 452 3.04e-32 128
MS.gene35901.t1 AT5G17040 22.747 466 315 11 19 469 4 439 8.11e-32 127
MS.gene35901.t1 AT5G17030 23.207 474 318 14 16 469 8 455 6.69e-31 124
MS.gene35901.t1 AT5G37950 26.154 325 217 7 70 379 27 343 1.49e-30 122
MS.gene35901.t1 AT5G12890 26.166 493 294 19 20 466 10 478 2.95e-30 123
MS.gene35901.t1 AT1G73880 25.104 482 308 16 17 470 11 467 4.94e-30 122
MS.gene35901.t1 AT1G07240 27.968 379 214 11 125 468 124 478 6.09e-30 122
MS.gene35901.t1 AT4G36770 25.000 484 271 17 20 452 4 446 1.12e-29 121
MS.gene35901.t1 AT2G18560 27.110 391 231 12 104 462 1 369 1.18e-29 120
MS.gene35901.t1 AT5G37950 25.617 324 214 6 70 379 27 337 1.45e-29 119
MS.gene35901.t1 AT3G16520 26.501 483 286 17 21 466 6 456 2.68e-29 120
MS.gene35901.t1 AT1G30530 23.579 475 310 16 19 472 11 453 9.09e-29 118
MS.gene35901.t1 AT1G51210 25.240 416 274 15 1 401 1 394 1.89e-28 117
MS.gene35901.t1 AT5G65550 23.168 423 274 14 20 413 9 409 2.19e-28 117
MS.gene35901.t1 AT4G01070 28.395 324 202 9 16 328 4 308 2.20e-28 115
MS.gene35901.t1 AT5G17040 27.667 300 192 7 180 469 53 337 2.31e-28 115
MS.gene35901.t1 AT1G22370 28.205 312 188 9 180 469 8 305 2.97e-28 114
MS.gene35901.t1 AT5G49690 25.225 444 296 15 20 447 10 433 5.31e-28 116
MS.gene35901.t1 AT3G16520 28.132 423 242 15 21 406 6 403 7.52e-28 115
MS.gene35901.t1 AT3G16520 28.132 423 242 15 21 406 6 403 8.74e-28 115
MS.gene35901.t1 AT3G22250 24.454 458 293 12 16 441 4 440 3.52e-27 114
MS.gene35901.t1 AT4G34135 25.971 489 299 17 20 466 11 478 4.82e-27 114
MS.gene35901.t1 AT2G22590 23.744 438 275 16 17 425 12 419 5.24e-23 102
MS.gene35901.t1 AT1G06000 24.025 487 286 18 12 469 2 433 8.06e-22 98.2
MS.gene35901.t1 AT5G53990 22.000 450 293 16 20 447 6 419 8.53e-17 82.8
MS.gene35901.t1 AT3G29630 21.789 436 284 14 20 425 6 414 4.38e-16 80.9
MS.gene35901.t1 AT5G54010 22.069 435 287 15 20 432 6 410 2.15e-15 78.6
MS.gene35901.t1 AT1G64910 22.768 448 266 18 18 425 4 411 4.72e-15 77.8
MS.gene35901.t1 AT4G27570 21.412 439 284 16 20 425 7 417 3.57e-13 71.6
MS.gene35901.t1 AT3G29630 21.101 436 261 13 20 425 6 388 1.50e-12 69.7
MS.gene35901.t1 AT5G54060 23.841 453 289 18 13 428 6 439 1.81e-12 69.7
MS.gene35901.t1 AT4G27560 21.185 439 285 15 20 425 7 417 1.86e-12 69.7
MS.gene35901.t1 AT4G09500 20.759 448 301 16 20 447 6 419 2.14e-12 69.3
MS.gene35901.t1 AT1G64920 20.751 453 297 15 20 446 6 422 9.44e-12 67.4
MS.gene35901.t1 AT2G22930 20.759 448 303 15 18 446 4 418 9.67e-12 67.4

Find 125 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGCTTGTTAGAAGATTTA+TGG 0.162654 5.1:+56010928 MS.gene35901:CDS
ATAAGAAGAGATGAAATTTC+TGG 0.187296 5.1:+56010908 MS.gene35901:CDS
TACATGATAGTTATTTGTTT+TGG 0.190342 5.1:+56009484 MS.gene35901:CDS
GTGGTGGTGGTTGGTGGAGG+AGG 0.222500 5.1:-56009126 None:intergenic
TTAAACATGATTATATAAAT+TGG 0.230963 5.1:+56010489 MS.gene35901:CDS
TGAAGCTGTTATGACTAAAA+TGG 0.236354 5.1:+56009407 MS.gene35901:CDS
AACAAGGATGTTGTTATTCT+TGG 0.238578 5.1:-56009238 None:intergenic
GTGGTGGTTGGTGGAGGAGG+GGG 0.240581 5.1:-56009123 None:intergenic
AATAATATGAAAGCCTTTCT+TGG 0.246704 5.1:+56011046 MS.gene35901:CDS
AAAGGTTGGTCCATCATTAT+TGG 0.266008 5.1:-56010812 None:intergenic
AAAGATATTTGTGGGGAAAA+AGG 0.278339 5.1:+56010662 MS.gene35901:CDS
GGTGGTGGTTGGTGGAGGAG+GGG 0.293258 5.1:-56009124 None:intergenic
TTGTTGTTGTTGTTTGGTTT+TGG 0.303097 5.1:-56009309 None:intergenic
GTGGTGGTGGTGGTTGGTGG+AGG 0.304629 5.1:-56009129 None:intergenic
TATAATCATGTTTAACATCT+TGG 0.308391 5.1:-56010481 None:intergenic
GTAGGTCCAATTGTGTAAAT+TGG 0.309840 5.1:-56010413 None:intergenic
TTGAGGCTCAATTTCATATA+TGG 0.312256 5.1:-56010357 None:intergenic
TGGTGGTTGGTGGAGGAGGG+GGG 0.312507 5.1:-56009122 None:intergenic
TATATCTTACTCTTACTCTA+TGG 0.324965 5.1:-56011089 None:intergenic
TGTTAGAAGATTTATGGATT+TGG 0.328441 5.1:+56010934 MS.gene35901:CDS
TCTATACCAATTTACACAAT+TGG 0.329382 5.1:+56010407 MS.gene35901:CDS
AGACGAATTGATGAGTTTCC+CGG 0.337307 5.1:-56010227 None:intergenic
ATCTTTGCCTCGACCTTCTT+CGG 0.344761 5.1:-56009370 None:intergenic
GGGTTGATGTGGCCGCGACC+TGG 0.348374 5.1:-56009186 None:intergenic
TGGTGGTGGTTGGTGGAGGA+GGG 0.350709 5.1:-56009125 None:intergenic
CATTACCCGGTAAATGCTTC+AGG 0.356617 5.1:+56009615 MS.gene35901:CDS
TCTTCGGAGGGAATAACGTT+TGG 0.366691 5.1:-56009354 None:intergenic
ATTTGGCCGTGACTAAAATA+AGG 0.372758 5.1:-56010440 None:intergenic
CCTTTCTTGGTAATATTACA+TGG 0.375066 5.1:+56011059 MS.gene35901:CDS
ATGTTCCCGTTGCGTCGTTT+TGG 0.379495 5.1:+56009532 MS.gene35901:CDS
AAACGTGTGGATTACATTCC+GGG 0.382512 5.1:+56010209 MS.gene35901:CDS
CAAACGTGTGGATTACATTC+CGG 0.393014 5.1:+56010208 MS.gene35901:CDS
TGCTTTCTTCATCCATGGTA+TGG 0.395710 5.1:-56010315 None:intergenic
CTTCGGAGGGAATAACGTTT+GGG 0.396861 5.1:-56009353 None:intergenic
TCTTAAACATTATCGTCGTT+TGG 0.398240 5.1:+56009581 MS.gene35901:CDS
ATAGTTGAGGATTGGAAGGT+TGG 0.402228 5.1:+56010848 MS.gene35901:CDS
TATGTGGGTGGTGGTGGTGG+TGG 0.406054 5.1:-56009148 None:intergenic
TACTATGTGGGTGGTGGTGG+TGG 0.412803 5.1:-56009151 None:intergenic
TGGTGCTTAATGTAGCAATT+TGG 0.416994 5.1:-56010457 None:intergenic
TAAGAAGAGATGAAATTTCT+GGG 0.419043 5.1:+56010909 MS.gene35901:CDS
AACTAACCTGAAGCATTTAC+CGG 0.422131 5.1:-56009621 None:intergenic
TCTTACCTCTCCAATAATGA+TGG 0.427830 5.1:+56010802 MS.gene35901:CDS
AGCTTGCATAGGTTCATCAT+TGG 0.430081 5.1:-56009207 None:intergenic
CATCGTGAAGTGGAAAATCT+TGG 0.433946 5.1:-56010250 None:intergenic
GGCTACTATGTGGGTGGTGG+TGG 0.434331 5.1:-56009154 None:intergenic
AACGTTATTCCCTCCGAAGA+AGG 0.450034 5.1:+56009357 MS.gene35901:CDS
TTGGAAGGTTGGGTGGAGAA+TGG 0.453887 5.1:+56010859 MS.gene35901:CDS
CTAAGTGGAAAGATATTTGT+GGG 0.454247 5.1:+56010654 MS.gene35901:CDS
AGAAGAAACGACGCCGACAT+AGG 0.455999 5.1:-56009555 None:intergenic
CCTTTGTTGTCACAGAAGAA+TGG 0.457118 5.1:+56009262 MS.gene35901:CDS
GCTTGCATAGGTTCATCATT+GGG 0.458429 5.1:-56009206 None:intergenic
GGGAATAACGTTTGGGATGG+TGG 0.464640 5.1:-56009346 None:intergenic
CCATGTAATATTACCAAGAA+AGG 0.468054 5.1:-56011059 None:intergenic
ATAGGCCAAAACGACGCAAC+GGG 0.468310 5.1:-56009537 None:intergenic
TTATAAGAGTTGGGAATAAG+AGG 0.472611 5.1:+56009508 MS.gene35901:CDS
CTTACTCTTACTCTATGGAT+TGG 0.474361 5.1:-56011084 None:intergenic
TAGTTGAGGATTGGAAGGTT+GGG 0.475505 5.1:+56010849 MS.gene35901:CDS
TATGCATCAACACTCTCAAT+TGG 0.478373 5.1:-56010706 None:intergenic
GTAAGTATATAGTTGAGGAT+TGG 0.479235 5.1:+56010840 MS.gene35901:CDS
ATCATGTTTAACATCTTGGT+TGG 0.495001 5.1:-56010477 None:intergenic
GAATCAAGTAGTTTCTCAAA+CGG 0.500155 5.1:-56009435 None:intergenic
ATGTGGCCGCGACCTGGGTA+TGG 0.506573 5.1:-56009180 None:intergenic
ATTATTGGAGAGGTAAGAAA+AGG 0.507093 5.1:-56010797 None:intergenic
TATTGTGCTTTCTTCATCCA+TGG 0.508332 5.1:-56010320 None:intergenic
ACTATATACTTACTATTCAA+AGG 0.508938 5.1:-56010830 None:intergenic
TCTAAGTGGAAAGATATTTG+TGG 0.514263 5.1:+56010653 MS.gene35901:CDS
AATCAAGTAGTTTCTCAAAC+GGG 0.520709 5.1:-56009434 None:intergenic
TATACTTACTATTCAAAGGT+TGG 0.524591 5.1:-56010826 None:intergenic
CTTAAAACATCAATTGCTTG+AGG 0.525457 5.1:-56010374 None:intergenic
TTGAGGATTGGAAGGTTGGG+TGG 0.527312 5.1:+56010852 MS.gene35901:CDS
GTGTTGATGCATAGTGCTAT+AGG 0.529886 5.1:+56010716 MS.gene35901:CDS
TGGCTAGATAATCAACCCAT+TGG 0.537035 5.1:+56010509 MS.gene35901:CDS
GGTTGATGTGGCCGCGACCT+GGG 0.543493 5.1:-56009185 None:intergenic
GGGTGGAATTCAACTAGAGA+AGG 0.545369 5.1:+56010758 MS.gene35901:CDS
TTGCCTCGACCTTCTTCGGA+GGG 0.545928 5.1:-56009366 None:intergenic
CAAATCAATGAAATTGCGAA+TGG 0.547383 5.1:+56010581 MS.gene35901:CDS
CGTAAGCTTGCATCGTGAAG+TGG 0.548361 5.1:-56010260 None:intergenic
TGACTAAAATAAGGTATGGT+AGG 0.550916 5.1:-56010431 None:intergenic
GGTATGGTACGGCTACTATG+TGG 0.556856 5.1:-56009164 None:intergenic
GAATAGTAAGTATATAGTTG+AGG 0.557074 5.1:+56010835 MS.gene35901:CDS
GTATATAGTTGAGGATTGGA+AGG 0.557301 5.1:+56010844 MS.gene35901:CDS
GGCTCAATTTCATATATGGA+AGG 0.559502 5.1:-56010353 None:intergenic
GCCGTGACTAAAATAAGGTA+TGG 0.560100 5.1:-56010435 None:intergenic
TGGGTGGAGAATGGAAAAGA+AGG 0.561383 5.1:+56010868 MS.gene35901:CDS
CTGTGACAACAAAGGTAACA+AGG 0.561503 5.1:-56009254 None:intergenic
GACATATAGAACAGAACCAA+TGG 0.564420 5.1:-56010525 None:intergenic
ACATATAGAACAGAACCAAT+GGG 0.568120 5.1:-56010524 None:intergenic
TGGAGACAAGGAGCTTGCAT+AGG 0.568649 5.1:-56009218 None:intergenic
GGTTCATCATTGGGTTGATG+TGG 0.578474 5.1:-56009197 None:intergenic
GTATGGTACGGCTACTATGT+GGG 0.579099 5.1:-56009163 None:intergenic
CTATCATGTATAATCACACT+CGG 0.585298 5.1:-56009471 None:intergenic
TGTTGTTATTCTTGGAGACA+AGG 0.586183 5.1:-56009230 None:intergenic
GCGAATGGTTTGCGCGAAAG+TGG 0.587045 5.1:+56010596 MS.gene35901:CDS
TAAACATTATCGTCGTTTGG+AGG 0.591585 5.1:+56009584 MS.gene35901:CDS
TACGGCTACTATGTGGGTGG+TGG 0.594703 5.1:-56009157 None:intergenic
ATTCCCTCCGAAGAAGGTCG+AGG 0.594862 5.1:+56009363 MS.gene35901:CDS
CAACGTGCAATTGCAAGTGG+AGG 0.595061 5.1:+56011013 MS.gene35901:CDS
GCCGCGACCTGGGTATGGTA+CGG 0.595928 5.1:-56009175 None:intergenic
ATGATGAAGTGAAGGAAATG+AGG 0.601521 5.1:+56010960 MS.gene35901:CDS
TTTGCCTCGACCTTCTTCGG+AGG 0.601667 5.1:-56009367 None:intergenic
TGCCAACGTGCAATTGCAAG+TGG 0.606024 5.1:+56011010 MS.gene35901:CDS
GCTCAATTTCATATATGGAA+GGG 0.606891 5.1:-56010352 None:intergenic
TTGGTCCATCATTATTGGAG+AGG 0.607037 5.1:-56010807 None:intergenic
TCTGTTCTATATGTCTCACA+AGG 0.608612 5.1:+56010533 MS.gene35901:CDS
GCCGTACCATACCCAGGTCG+CGG 0.613664 5.1:+56009174 MS.gene35901:CDS
TTTGGATGATGATGAAGTGA+AGG 0.614768 5.1:+56010952 MS.gene35901:CDS
TAGCTTTGAATACCATACCA+TGG 0.615895 5.1:+56010303 MS.gene35901:CDS
GGAGGGAATAACGTTTGGGA+TGG 0.617245 5.1:-56009349 None:intergenic
TATCGTCGTTTGGAGGAACA+TGG 0.621006 5.1:+56009591 MS.gene35901:CDS
GGAGGAACATGGTCATTACC+CGG 0.623039 5.1:+56009602 MS.gene35901:CDS
AACGTGCAATTGCAAGTGGA+GGG 0.623769 5.1:+56011014 MS.gene35901:CDS
TGCGTGGAGAAAGTTCTAAG+TGG 0.625771 5.1:+56010639 MS.gene35901:CDS
CATAGGCCAAAACGACGCAA+CGG 0.640881 5.1:-56009538 None:intergenic
CCATTCTTCTGTGACAACAA+AGG 0.641940 5.1:-56009262 None:intergenic
CTCCACTTGCAATTGCACGT+TGG 0.646750 5.1:-56011012 None:intergenic
TGGTACGGCTACTATGTGGG+TGG 0.662770 5.1:-56009160 None:intergenic
ACTAACCTGAAGCATTTACC+GGG 0.665804 5.1:-56009620 None:intergenic
ATAGTAGCCGTACCATACCC+AGG 0.666075 5.1:+56009168 MS.gene35901:CDS
AAAGTGGTGTTAGATTCTTG+TGG 0.666670 5.1:+56010612 MS.gene35901:CDS
AGAAGTTGGTGACAAACGTG+TGG 0.670943 5.1:+56010196 MS.gene35901:intron
TAAGTGGAAAGATATTTGTG+GGG 0.677407 5.1:+56010655 MS.gene35901:CDS
AGATTCTTGTGGATAATGCG+TGG 0.682535 5.1:+56010623 MS.gene35901:CDS
ACTCTCAATTGGTCACACCA+TGG 0.684804 5.1:-56010695 None:intergenic
TTGATGCATAGTGCTATAGG+TGG 0.705531 5.1:+56010719 MS.gene35901:CDS
CTGTTCTATATGTCTCACAA+GGG 0.733356 5.1:+56010534 MS.gene35901:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAACATGATTATATAAAT+TGG + chr5.1:56010489-56010508 MS.gene35901:CDS 10.0%
!! ATATACCAATATAAAATTAG+AGG - chr5.1:56009937-56009956 None:intergenic 15.0%
!! TATTCTTTAATAATTGAAAC+TGG + chr5.1:56009874-56009893 MS.gene35901:intron 15.0%
!! TTTATATTGGTATATAGTTT+AGG + chr5.1:56009942-56009961 MS.gene35901:intron 15.0%
!!! AGTTTTTTCTTTCTTTATAA+AGG - chr5.1:56009739-56009758 None:intergenic 15.0%
!!! TAAAACCTCTAATTTTATAT+TGG + chr5.1:56009929-56009948 MS.gene35901:intron 15.0%
!!! TCTTTTATTGACTAAATTTA+AGG + chr5.1:56009648-56009667 MS.gene35901:intron 15.0%
!! ACTATATACTTACTATTCAA+AGG - chr5.1:56010833-56010852 None:intergenic 20.0%
!! TATAATCATGTTTAACATCT+TGG - chr5.1:56010484-56010503 None:intergenic 20.0%
!!! AAAGGCTTTCATATTATTTT+CGG - chr5.1:56011044-56011063 None:intergenic 20.0%
!!! ACATGATAGTTATTTGTTTT+GGG + chr5.1:56009485-56009504 MS.gene35901:CDS 20.0%
!!! ATGTGAAAATCATGTTTTTT+TGG - chr5.1:56010119-56010138 None:intergenic 20.0%
!!! TACATGATAGTTATTTGTTT+TGG + chr5.1:56009484-56009503 MS.gene35901:CDS 20.0%
! AATAATATGAAAGCCTTTCT+TGG + chr5.1:56011046-56011065 MS.gene35901:CDS 25.0%
! ATAAGAAGAGATGAAATTTC+TGG + chr5.1:56010908-56010927 MS.gene35901:CDS 25.0%
! CACATTAAATAACATGTGAT+AGG - chr5.1:56009903-56009922 None:intergenic 25.0%
! GAATAGTAAGTATATAGTTG+AGG + chr5.1:56010835-56010854 MS.gene35901:CDS 25.0%
! GTTTATGATTTAAGCTAACT+GGG + chr5.1:56009707-56009726 MS.gene35901:intron 25.0%
! TAAGAAGAGATGAAATTTCT+GGG + chr5.1:56010909-56010928 MS.gene35901:CDS 25.0%
! TATACTTACTATTCAAAGGT+TGG - chr5.1:56010829-56010848 None:intergenic 25.0%
! TATTAAAGAATACTTCTGCA+AGG - chr5.1:56009866-56009885 None:intergenic 25.0%
! TCTATACCAATTTACACAAT+TGG + chr5.1:56010407-56010426 MS.gene35901:CDS 25.0%
! TGTTAGAAGATTTATGGATT+TGG + chr5.1:56010934-56010953 MS.gene35901:CDS 25.0%
! TTTCTTGTATTAATCAGTTG+AGG + chr5.1:56010035-56010054 MS.gene35901:intron 25.0%
!!! CATTATACTTGCATTTTGAT+CGG + chr5.1:56009769-56009788 MS.gene35901:intron 25.0%
!!! GGTCTTATTTTTAATCTTGT+GGG + chr5.1:56010060-56010079 MS.gene35901:intron 25.0%
!!! GTCTTATTTTTAATCTTGTG+GGG + chr5.1:56010061-56010080 MS.gene35901:intron 25.0%
!!! TCTTATTTTTAATCTTGTGG+GGG + chr5.1:56010062-56010081 MS.gene35901:intron 25.0%
!!! TGGTCTTATTTTTAATCTTG+TGG + chr5.1:56010059-56010078 MS.gene35901:intron 25.0%
!!! TTAGAGAGAGTTTTAGTTTA+TGG + chr5.1:56009971-56009990 MS.gene35901:intron 25.0%
AAAGATATTTGTGGGGAAAA+AGG + chr5.1:56010662-56010681 MS.gene35901:CDS 30.0%
AAGATATTTGTGGGGAAAAA+GGG + chr5.1:56010663-56010682 MS.gene35901:CDS 30.0%
AATCAAGTAGTTTCTCAAAC+GGG - chr5.1:56009437-56009456 None:intergenic 30.0%
ACATATAGAACAGAACCAAT+GGG - chr5.1:56010527-56010546 None:intergenic 30.0%
ATCATGTTTAACATCTTGGT+TGG - chr5.1:56010480-56010499 None:intergenic 30.0%
ATTATTGGAGAGGTAAGAAA+AGG - chr5.1:56010800-56010819 None:intergenic 30.0%
CAAATCAATGAAATTGCGAA+TGG + chr5.1:56010581-56010600 MS.gene35901:CDS 30.0%
CCATGTAATATTACCAAGAA+AGG - chr5.1:56011062-56011081 None:intergenic 30.0%
CGTTTATGATTTAAGCTAAC+TGG + chr5.1:56009706-56009725 MS.gene35901:intron 30.0%
CTAAGTGGAAAGATATTTGT+GGG + chr5.1:56010654-56010673 MS.gene35901:CDS 30.0%
CTATCATGTATAATCACACT+CGG - chr5.1:56009474-56009493 None:intergenic 30.0%
CTTAAAACATCAATTGCTTG+AGG - chr5.1:56010377-56010396 None:intergenic 30.0%
GAATCAAGTAGTTTCTCAAA+CGG - chr5.1:56009438-56009457 None:intergenic 30.0%
GCTCAATTTCATATATGGAA+GGG - chr5.1:56010355-56010374 None:intergenic 30.0%
GTAAGTATATAGTTGAGGAT+TGG + chr5.1:56010840-56010859 MS.gene35901:CDS 30.0%
TAAATTGTTGCAACAGAAGT+TGG + chr5.1:56010182-56010201 MS.gene35901:intron 30.0%
TAAGTGGAAAGATATTTGTG+GGG + chr5.1:56010655-56010674 MS.gene35901:CDS 30.0%
TCTAAGTGGAAAGATATTTG+TGG + chr5.1:56010653-56010672 MS.gene35901:CDS 30.0%
TCTTAAACATTATCGTCGTT+TGG + chr5.1:56009581-56009600 MS.gene35901:CDS 30.0%
TGAAGCTGTTATGACTAAAA+TGG + chr5.1:56009407-56009426 MS.gene35901:CDS 30.0%
TGACTAAAATAAGGTATGGT+AGG - chr5.1:56010434-56010453 None:intergenic 30.0%
TTATAAGAGTTGGGAATAAG+AGG + chr5.1:56009508-56009527 MS.gene35901:CDS 30.0%
TTGAGGCTCAATTTCATATA+TGG - chr5.1:56010360-56010379 None:intergenic 30.0%
TTGTATTAATCAGTTGAGGT+TGG + chr5.1:56010039-56010058 MS.gene35901:intron 30.0%
! AACAAGGATGTTGTTATTCT+TGG - chr5.1:56009241-56009260 None:intergenic 30.0%
! ATGTTGTTGTTGTTGTTGTT+TGG - chr5.1:56009318-56009337 None:intergenic 30.0%
! CCTTTCTTGGTAATATTACA+TGG + chr5.1:56011059-56011078 MS.gene35901:CDS 30.0%
! TTTTTCTTCTAGACATCAGA+GGG + chr5.1:56009810-56009829 MS.gene35901:intron 30.0%
!! AAGAAAAAGTACCGATAATC+CGG - chr5.1:56009798-56009817 None:intergenic 30.0%
!!! ACCATACCTTATTTTAGTCA+CGG + chr5.1:56010434-56010453 MS.gene35901:CDS 30.0%
!!! TGTTTTGGGTTATAAGAGTT+GGG + chr5.1:56009499-56009518 MS.gene35901:CDS 30.0%
!!! TTGTTGTTGTTGTTTGGTTT+TGG - chr5.1:56009312-56009331 None:intergenic 30.0%
!!! TTGTTTTGGGTTATAAGAGT+TGG + chr5.1:56009498-56009517 MS.gene35901:CDS 30.0%
AGGTGAGAAAAATACTTCTC+TGG - chr5.1:56009841-56009860 None:intergenic 35.0%
ATGATGAAGTGAAGGAAATG+AGG + chr5.1:56010960-56010979 MS.gene35901:CDS 35.0%
ATTTGGCCGTGACTAAAATA+AGG - chr5.1:56010443-56010462 None:intergenic 35.0%
CTGTTCTATATGTCTCACAA+GGG + chr5.1:56010534-56010553 MS.gene35901:CDS 35.0%
GACATATAGAACAGAACCAA+TGG - chr5.1:56010528-56010547 None:intergenic 35.0%
GGCTCAATTTCATATATGGA+AGG - chr5.1:56010356-56010375 None:intergenic 35.0%
GTAGGTCCAATTGTGTAAAT+TGG - chr5.1:56010416-56010435 None:intergenic 35.0%
GTATATAGTTGAGGATTGGA+AGG + chr5.1:56010844-56010863 MS.gene35901:CDS 35.0%
TAAACATTATCGTCGTTTGG+AGG + chr5.1:56009584-56009603 MS.gene35901:CDS 35.0%
TATGCATCAACACTCTCAAT+TGG - chr5.1:56010709-56010728 None:intergenic 35.0%
TATTGTGCTTTCTTCATCCA+TGG - chr5.1:56010323-56010342 None:intergenic 35.0%
TCTGTTCTATATGTCTCACA+AGG + chr5.1:56010533-56010552 MS.gene35901:CDS 35.0%
TCTTACCTCTCCAATAATGA+TGG + chr5.1:56010802-56010821 MS.gene35901:CDS 35.0%
TGGTGCTTAATGTAGCAATT+TGG - chr5.1:56010460-56010479 None:intergenic 35.0%
! AAAGGTTGGTCCATCATTAT+TGG - chr5.1:56010815-56010834 None:intergenic 35.0%
! AAAGTGGTGTTAGATTCTTG+TGG + chr5.1:56010612-56010631 MS.gene35901:CDS 35.0%
! AACTAACCTGAAGCATTTAC+CGG - chr5.1:56009624-56009643 None:intergenic 35.0%
! ATAGTGCTATAGGTGGTTTT+TGG + chr5.1:56010726-56010745 MS.gene35901:CDS 35.0%
! CTTTTTCTTCTAGACATCAG+AGG + chr5.1:56009809-56009828 MS.gene35901:intron 35.0%
! TGTTGTTATTCTTGGAGACA+AGG - chr5.1:56009233-56009252 None:intergenic 35.0%
! TTTGGATGATGATGAAGTGA+AGG + chr5.1:56010952-56010971 MS.gene35901:CDS 35.0%
!! TAGCTTTGAATACCATACCA+TGG + chr5.1:56010303-56010322 MS.gene35901:CDS 35.0%
!! TGGGCTTGTTAGAAGATTTA+TGG + chr5.1:56010928-56010947 MS.gene35901:CDS 35.0%
!!! AAAAAGGGTTTGTTTTGCCA+TGG + chr5.1:56010678-56010697 MS.gene35901:CDS 35.0%
!!! ACTAGAGAAGGTTTGTTTTG+TGG + chr5.1:56010770-56010789 MS.gene35901:CDS 35.0%
!!! TGTTGTTGTTTGGTTTTGGT+GGG - chr5.1:56009308-56009327 None:intergenic 35.0%
!!! TTGTTGTTGTTTGGTTTTGG+TGG - chr5.1:56009309-56009328 None:intergenic 35.0%
AAGAATACTTCTGCAAGGCT+AGG - chr5.1:56009861-56009880 None:intergenic 40.0%
AGACGAATTGATGAGTTTCC+CGG - chr5.1:56010230-56010249 None:intergenic 40.0%
AGATTCTTGTGGATAATGCG+TGG + chr5.1:56010623-56010642 MS.gene35901:CDS 40.0%
AGCTTGCATAGGTTCATCAT+TGG - chr5.1:56009210-56009229 None:intergenic 40.0%
ATAGTTGAGGATTGGAAGGT+TGG + chr5.1:56010848-56010867 MS.gene35901:CDS 40.0%
CATCGTGAAGTGGAAAATCT+TGG - chr5.1:56010253-56010272 None:intergenic 40.0%
CCATTCTTCTGTGACAACAA+AGG - chr5.1:56009265-56009284 None:intergenic 40.0%
CTGTGACAACAAAGGTAACA+AGG - chr5.1:56009257-56009276 None:intergenic 40.0%
GCCGTGACTAAAATAAGGTA+TGG - chr5.1:56010438-56010457 None:intergenic 40.0%
GCTTGCATAGGTTCATCATT+GGG - chr5.1:56009209-56009228 None:intergenic 40.0%
TAGTTGAGGATTGGAAGGTT+GGG + chr5.1:56010849-56010868 MS.gene35901:CDS 40.0%
TGCTTTCTTCATCCATGGTA+TGG - chr5.1:56010318-56010337 None:intergenic 40.0%
TGGCTAGATAATCAACCCAT+TGG + chr5.1:56010509-56010528 MS.gene35901:CDS 40.0%
TTGATGCATAGTGCTATAGG+TGG + chr5.1:56010719-56010738 MS.gene35901:CDS 40.0%
TTGGTCCATCATTATTGGAG+AGG - chr5.1:56010810-56010829 None:intergenic 40.0%
! AAACGTGTGGATTACATTCC+GGG + chr5.1:56010209-56010228 MS.gene35901:CDS 40.0%
! ACTAACCTGAAGCATTTACC+GGG - chr5.1:56009623-56009642 None:intergenic 40.0%
! CAAACGTGTGGATTACATTC+CGG + chr5.1:56010208-56010227 MS.gene35901:CDS 40.0%
! CCTTTGTTGTCACAGAAGAA+TGG + chr5.1:56009262-56009281 MS.gene35901:CDS 40.0%
! CTCACAAGGGAGTTTTCTTT+CGG + chr5.1:56010547-56010566 MS.gene35901:CDS 40.0%
! GTGTTGATGCATAGTGCTAT+AGG + chr5.1:56010716-56010735 MS.gene35901:CDS 40.0%
!!! GTGGTTTTTGGTCACATTGT+GGG + chr5.1:56010738-56010757 MS.gene35901:CDS 40.0%
AACGTGCAATTGCAAGTGGA+GGG + chr5.1:56011014-56011033 MS.gene35901:CDS 45.0%
AACGTTATTCCCTCCGAAGA+AGG + chr5.1:56009357-56009376 MS.gene35901:CDS 45.0%
ACTCTCAATTGGTCACACCA+TGG - chr5.1:56010698-56010717 None:intergenic 45.0%
ATCTTTGCCTCGACCTTCTT+CGG - chr5.1:56009373-56009392 None:intergenic 45.0%
CATTACCCGGTAAATGCTTC+AGG + chr5.1:56009615-56009634 MS.gene35901:CDS 45.0%
CTTCGGAGGGAATAACGTTT+GGG - chr5.1:56009356-56009375 None:intergenic 45.0%
GGGTGGAATTCAACTAGAGA+AGG + chr5.1:56010758-56010777 MS.gene35901:CDS 45.0%
GTATGGTACGGCTACTATGT+GGG - chr5.1:56009166-56009185 None:intergenic 45.0%
TATCGTCGTTTGGAGGAACA+TGG + chr5.1:56009591-56009610 MS.gene35901:CDS 45.0%
TCTTCGGAGGGAATAACGTT+TGG - chr5.1:56009357-56009376 None:intergenic 45.0%
TGGGTGGAGAATGGAAAAGA+AGG + chr5.1:56010868-56010887 MS.gene35901:CDS 45.0%
TTGATCGGACTCCGGATTAT+CGG + chr5.1:56009784-56009803 MS.gene35901:intron 45.0%
!! AGAAGTTGGTGACAAACGTG+TGG + chr5.1:56010196-56010215 MS.gene35901:intron 45.0%
!! CTTGCATTTTGATCGGACTC+CGG + chr5.1:56009776-56009795 MS.gene35901:intron 45.0%
!! GGTTCATCATTGGGTTGATG+TGG - chr5.1:56009200-56009219 None:intergenic 45.0%
!! TGCGTGGAGAAAGTTCTAAG+TGG + chr5.1:56010639-56010658 MS.gene35901:CDS 45.0%
!!! GGTGGTTTTTGGTCACATTG+TGG + chr5.1:56010737-56010756 MS.gene35901:CDS 45.0%
!!! GTTGTTTGGTTTTGGTGGGT+CGG - chr5.1:56009304-56009323 None:intergenic 45.0%
!!! GTTTTTGGTCACATTGTGGG+TGG + chr5.1:56010741-56010760 MS.gene35901:CDS 45.0%
AGAAGAAACGACGCCGACAT+AGG - chr5.1:56009558-56009577 None:intergenic 50.0%
ATAGGCCAAAACGACGCAAC+GGG - chr5.1:56009540-56009559 None:intergenic 50.0%
ATAGTAGCCGTACCATACCC+AGG + chr5.1:56009168-56009187 MS.gene35901:CDS 50.0%
CAACGTGCAATTGCAAGTGG+AGG + chr5.1:56011013-56011032 MS.gene35901:CDS 50.0%
CATAGGCCAAAACGACGCAA+CGG - chr5.1:56009541-56009560 None:intergenic 50.0%
CGTAAGCTTGCATCGTGAAG+TGG - chr5.1:56010263-56010282 None:intergenic 50.0%
CTCCACTTGCAATTGCACGT+TGG - chr5.1:56011015-56011034 None:intergenic 50.0%
GGAGGAACATGGTCATTACC+CGG + chr5.1:56009602-56009621 MS.gene35901:CDS 50.0%
GGAGGGAATAACGTTTGGGA+TGG - chr5.1:56009352-56009371 None:intergenic 50.0%
GGTATGGTACGGCTACTATG+TGG - chr5.1:56009167-56009186 None:intergenic 50.0%
TGCCAACGTGCAATTGCAAG+TGG + chr5.1:56011010-56011029 MS.gene35901:CDS 50.0%
TGGAGACAAGGAGCTTGCAT+AGG - chr5.1:56009221-56009240 None:intergenic 50.0%
TTGAGGATTGGAAGGTTGGG+TGG + chr5.1:56010852-56010871 MS.gene35901:CDS 50.0%
TTGGAAGGTTGGGTGGAGAA+TGG + chr5.1:56010859-56010878 MS.gene35901:CDS 50.0%
! ATGTTCCCGTTGCGTCGTTT+TGG + chr5.1:56009532-56009551 MS.gene35901:CDS 50.0%
! GGGAATAACGTTTGGGATGG+TGG - chr5.1:56009349-56009368 None:intergenic 50.0%
!! TGCGTCGTTTTGGCCTATGT+CGG + chr5.1:56009542-56009561 MS.gene35901:CDS 50.0%
ATTCCCTCCGAAGAAGGTCG+AGG + chr5.1:56009363-56009382 MS.gene35901:CDS 55.0%
TACGGCTACTATGTGGGTGG+TGG - chr5.1:56009160-56009179 None:intergenic 55.0%
TGGTACGGCTACTATGTGGG+TGG - chr5.1:56009163-56009182 None:intergenic 55.0%
TTGCCTCGACCTTCTTCGGA+GGG - chr5.1:56009369-56009388 None:intergenic 55.0%
TTTGCCTCGACCTTCTTCGG+AGG - chr5.1:56009370-56009389 None:intergenic 55.0%
! GCGAATGGTTTGCGCGAAAG+TGG + chr5.1:56010596-56010615 MS.gene35901:CDS 55.0%
!! TACTATGTGGGTGGTGGTGG+TGG - chr5.1:56009154-56009173 None:intergenic 55.0%
! GGCTACTATGTGGGTGGTGG+TGG - chr5.1:56009157-56009176 None:intergenic 60.0%
!! TATGTGGGTGGTGGTGGTGG+TGG - chr5.1:56009151-56009170 None:intergenic 60.0%
!! TGGTGGTGGTTGGTGGAGGA+GGG - chr5.1:56009128-56009147 None:intergenic 60.0%
ATGTGGCCGCGACCTGGGTA+TGG - chr5.1:56009183-56009202 None:intergenic 65.0%
GCCGCGACCTGGGTATGGTA+CGG - chr5.1:56009178-56009197 None:intergenic 65.0%
GCCGTACCATACCCAGGTCG+CGG + chr5.1:56009174-56009193 MS.gene35901:CDS 65.0%
GGTGGAGGAGGGGGGTTTGA+AGG - chr5.1:56009117-56009136 None:intergenic 65.0%
! GGTTGATGTGGCCGCGACCT+GGG - chr5.1:56009188-56009207 None:intergenic 65.0%
!! GGTGGTGGTTGGTGGAGGAG+GGG - chr5.1:56009127-56009146 None:intergenic 65.0%
!! GTGGTGGTGGTGGTGGTGGT+TGG - chr5.1:56009138-56009157 None:intergenic 65.0%
!! GTGGTGGTGGTGGTGGTTGG+TGG - chr5.1:56009135-56009154 None:intergenic 65.0%
!! GTGGTGGTGGTGGTTGGTGG+AGG - chr5.1:56009132-56009151 None:intergenic 65.0%
!! GTGGTGGTGGTTGGTGGAGG+AGG - chr5.1:56009129-56009148 None:intergenic 65.0%
!! GTGGTGGTTGGTGGAGGAGG+GGG - chr5.1:56009126-56009145 None:intergenic 65.0%
!! TGGTGGTTGGTGGAGGAGGG+GGG - chr5.1:56009125-56009144 None:intergenic 65.0%
!! GGGTTGATGTGGCCGCGACC+TGG - chr5.1:56009189-56009208 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr5.1:56009139-56009158 None:intergenic 70.0%
!! GTGGGTGGTGGTGGTGGTGG+TGG - chr5.1:56009148-56009167 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 56009108 56011099 56009108 ID=MS.gene35901
chr5.1 mRNA 56009108 56011099 56009108 ID=MS.gene35901.t1;Parent=MS.gene35901
chr5.1 exon 56009108 56009636 56009108 ID=MS.gene35901.t1.exon1;Parent=MS.gene35901.t1
chr5.1 CDS 56009108 56009636 56009108 ID=cds.MS.gene35901.t1;Parent=MS.gene35901.t1
chr5.1 exon 56010198 56011099 56010198 ID=MS.gene35901.t1.exon2;Parent=MS.gene35901.t1
chr5.1 CDS 56010198 56011099 56010198 ID=cds.MS.gene35901.t1;Parent=MS.gene35901.t1
Gene Sequence

>MS.gene35901

ATGGAACCTTCAAACCCCCCTCCTCCACCAACCACCACCACCACCACCACCACCACCCACATAGTAGCCGTACCATACCCAGGTCGCGGCCACATCAACCCAATGATGAACCTATGCAAGCTCCTTGTCTCCAAGAATAACAACATCCTTGTTACCTTTGTTGTCACAGAAGAATGGCTCAACATCATCAACTCCGACCCACCAAAACCAAACAACAACAACAACAACATCAAATTTGCCACCATCCCAAACGTTATTCCCTCCGAAGAAGGTCGAGGCAAAGATTTTCTAAATTTTCTTGAAGCTGTTATGACTAAAATGGAAGACCCGTTTGAGAAACTACTTGATTCGTTTGAGACAGTGCCGAGTGTGATTATACATGATAGTTATTTGTTTTGGGTTATAAGAGTTGGGAATAAGAGGAATGTTCCCGTTGCGTCGTTTTGGCCTATGTCGGCGTCGTTTCTTCTTGTTCTTAAACATTATCGTCGTTTGGAGGAACATGGTCATTACCCGGTAAATGCTTCAGGTTAGTTACTTTCTTTTATTGACTAAATTTAAGGTACTTTTCTTTTATTTACAACTTCAAAAGAAAAAACGTTTATGATTTAAGCTAACTGGGAATATTCCTTTATAAAGAAAGAAAAAACTTTTTTAATCACATTATACTTGCATTTTGATCGGACTCCGGATTATCGGTACTTTTTCTTCTAGACATCAGAGGGTTACACCAGAGAAGTATTTTTCTCACCTAGCCTTGCAGAAGTATTCTTTAATAATTGAAACTGGCTTCCTATCACATGTTATTTAATGTGACACTCTAAAACCTCTAATTTTATATTGGTATATAGTTTAGGAGCTGATTAGAGAGAGTTTTAGTTTATGGACTAAATTCATGATTTATTCGACACATTTTCTATCTATTCTTTTCTTGTATTAATCAGTTGAGGTTGGTCTTATTTTTAATCTTGTGGGGGTATGTCTCTTCTATAGATTAATTTATTAGTGCCAAAAAAACATGATTTTCACATTAGAATTTATTAATAAACATTTTTAAGTGTTTTGTGTGTTATTTAAATTGTTGCAACAGAAGTTGGTGACAAACGTGTGGATTACATTCCGGGAAACTCATCAATTCGTCTCCAAGATTTTCCACTTCACGATGCAAGCTTACGCACTCGTAGATTGTTAGAATTAGCTTTGAATACCATACCATGGATGAAGAAAGCACAATATCTATTATTCCCTTCCATATATGAAATTGAGCCTCAAGCAATTGATGTTTTAAGAGAAGAATTTTCTATACCAATTTACACAATTGGACCTACCATACCTTATTTTAGTCACGGCCAAATTGCTACATTAAGCACCAACCAAGATGTTAAACATGATTATATAAATTGGCTAGATAATCAACCCATTGGTTCTGTTCTATATGTCTCACAAGGGAGTTTTCTTTCGGTTTCAAGCGAACAAATCAATGAAATTGCGAATGGTTTGCGCGAAAGTGGTGTTAGATTCTTGTGGATAATGCGTGGAGAAAGTTCTAAGTGGAAAGATATTTGTGGGGAAAAAGGGTTTGTTTTGCCATGGTGTGACCAATTGAGAGTGTTGATGCATAGTGCTATAGGTGGTTTTTGGTCACATTGTGGGTGGAATTCAACTAGAGAAGGTTTGTTTTGTGGTGTGCCTTTTCTTACCTCTCCAATAATGATGGACCAACCTTTGAATAGTAAGTATATAGTTGAGGATTGGAAGGTTGGGTGGAGAATGGAAAAGAAGGTTAAAGATGATGTTTTGATAAGAAGAGATGAAATTTCTGGGCTTGTTAGAAGATTTATGGATTTGGATGATGATGAAGTGAAGGAAATGAGGAAAAGAGCAAGAGATCTTCAACAAATATGCCAACGTGCAATTGCAAGTGGAGGGTCATCCGAAAATAATATGAAAGCCTTTCTTGGTAATATTACATGGATCCAATCCATAGAGTAA
Protein sequence

>MS.gene35901.t1

MEPSNPPPPPTTTTTTTTTHIVAVPYPGRGHINPMMNLCKLLVSKNNNILVTFVVTEEWLNIINSDPPKPNNNNNNIKFATIPNVIPSEEGRGKDFLNFLEAVMTKMEDPFEKLLDSFETVPSVIIHDSYLFWVIRVGNKRNVPVASFWPMSASFLLVLKHYRRLEEHGHYPVNASEVGDKRVDYIPGNSSIRLQDFPLHDASLRTRRLLELALNTIPWMKKAQYLLFPSIYEIEPQAIDVLREEFSIPIYTIGPTIPYFSHGQIATLSTNQDVKHDYINWLDNQPIGSVLYVSQGSFLSVSSEQINEIANGLRESGVRFLWIMRGESSKWKDICGEKGFVLPWCDQLRVLMHSAIGGFWSHCGWNSTREGLFCGVPFLTSPIMMDQPLNSKYIVEDWKVGWRMEKKVKDDVLIRRDEISGLVRRFMDLDDDEVKEMRKRARDLQQICQRAIASGGSSENNMKAFLGNITWIQSIE