AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35902

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35902.t1 MTR_5g075440 54.462 437 134 11 1 410 1 399 1.92e-141 411
MS.gene35902.t1 MTR_5g072810 43.358 399 164 9 10 391 12 365 3.54e-95 293
MS.gene35902.t1 MTR_5g072820 41.791 402 173 7 10 396 10 365 2.96e-93 288
MS.gene35902.t1 MTR_5g072850 86.047 129 14 1 286 410 209 337 3.85e-72 231
MS.gene35902.t1 MTR_5g072850 90.789 76 7 0 1 76 1 76 6.39e-40 147
MS.gene35902.t1 MTR_5g072860 65.441 136 36 2 286 410 274 409 8.92e-55 188
MS.gene35902.t1 MTR_5g072860 57.419 155 54 3 10 152 18 172 1.74e-52 182
MS.gene35902.t1 MTR_5g072830 55.405 148 55 2 10 146 10 157 1.18e-46 166
MS.gene35902.t1 MTR_5g072830 65.094 106 37 0 286 391 255 360 7.33e-41 150
MS.gene35902.t1 MTR_3g031400 61.029 136 42 2 286 410 258 393 1.18e-46 167
MS.gene35902.t1 MTR_3g031400 54.430 158 60 4 2 147 9 166 3.84e-45 162
MS.gene35902.t1 MTR_3g031450 57.051 156 56 5 2 147 9 163 5.88e-46 165
MS.gene35902.t1 MTR_3g031450 58.824 136 45 2 286 410 260 395 3.63e-45 162
MS.gene35902.t1 MTR_5g072840 55.405 148 55 2 10 146 10 157 1.10e-45 164
MS.gene35902.t1 MTR_5g072840 64.865 111 39 0 286 396 255 365 2.36e-44 160
MS.gene35902.t1 MTR_5g464760 29.018 448 246 15 10 412 12 432 5.20e-36 138
MS.gene35902.t1 MTR_5g464810 27.155 464 238 16 7 412 9 430 7.80e-33 129
MS.gene35902.t1 MTR_5g064240 27.155 464 238 16 7 412 9 430 7.80e-33 129
MS.gene35902.t1 MTR_6g038220 29.167 408 216 15 10 391 11 371 1.44e-31 125
MS.gene35902.t1 MTR_6g038200 27.670 412 218 16 10 391 11 372 4.67e-31 124
MS.gene35902.t1 MTR_2g008210 26.340 429 238 13 10 397 11 402 1.16e-30 123
MS.gene35902.t1 MTR_5g072825 57.143 98 28 3 1 88 1 94 1.24e-30 113
MS.gene35902.t1 MTR_6g014040 26.906 446 250 17 10 406 10 428 9.17e-30 120
MS.gene35902.t1 MTR_6g014270 25.721 451 254 17 10 408 7 428 4.02e-29 119
MS.gene35902.t1 MTR_6g038230 27.340 406 227 16 10 391 11 372 5.20e-29 118
MS.gene35902.t1 MTR_6g014020 25.359 418 248 9 10 390 10 400 9.18e-29 117
MS.gene35902.t1 MTR_6g013920 28.475 446 245 15 10 408 10 428 1.47e-28 117
MS.gene35902.t1 MTR_6g013450 25.556 450 255 13 10 408 10 430 2.11e-28 116
MS.gene35902.t1 MTR_6g038300 27.563 439 228 19 10 407 11 400 8.34e-28 114
MS.gene35902.t1 MTR_6g013900 26.966 445 253 16 10 408 10 428 1.31e-27 114
MS.gene35902.t1 MTR_3g049970 25.899 417 232 12 10 390 9 384 2.98e-27 113
MS.gene35902.t1 MTR_3g479490 25.164 457 241 11 10 406 6 421 3.07e-27 113
MS.gene35902.t1 MTR_5g058320 26.256 438 251 13 10 408 10 414 5.64e-27 112
MS.gene35902.t1 MTR_6g013440 26.281 449 252 20 10 408 11 430 6.15e-27 112
MS.gene35902.t1 MTR_3g008010 26.366 421 238 15 10 390 10 398 9.07e-27 112
MS.gene35902.t1 MTR_6g014200 26.411 443 255 17 10 406 7 424 1.25e-26 111
MS.gene35902.t1 MTR_8g083280 43.411 129 67 2 286 412 269 393 1.72e-26 111
MS.gene35902.t1 MTR_8g088560 28.953 449 238 21 1 411 1 406 4.21e-26 110
MS.gene35902.t1 MTR_6g014310 25.000 444 260 14 10 406 11 428 6.00e-26 109
MS.gene35902.t1 MTR_7g080900 27.047 403 231 15 10 391 12 372 1.20e-25 108
MS.gene35902.t1 MTR_6g014220 25.333 450 249 18 10 406 10 425 2.22e-25 108
MS.gene35902.t1 MTR_8g059425 25.714 420 242 14 10 390 10 398 2.56e-25 107
MS.gene35902.t1 MTR_3g479520 26.682 446 252 14 10 408 15 432 4.57e-25 107
MS.gene35902.t1 MTR_4g095008 26.817 399 228 10 19 390 20 381 5.37e-25 107
MS.gene35902.t1 MTR_6g014250 24.724 453 258 18 9 410 9 429 1.07e-24 106
MS.gene35902.t1 MTR_6g013990 25.676 444 255 13 10 406 10 425 1.34e-24 105
MS.gene35902.t1 MTR_3g079480 26.230 427 251 12 10 400 21 419 1.49e-24 105
MS.gene35902.t1 MTR_6g013960 26.339 448 249 16 10 406 10 427 1.95e-24 105
MS.gene35902.t1 MTR_8g083290 41.429 140 64 5 287 408 267 406 2.13e-24 105
MS.gene35902.t1 MTR_5g044330 71.212 66 18 1 219 283 1 66 2.23e-24 95.9
MS.gene35902.t1 MTR_6g038240 28.947 418 205 19 10 391 11 372 3.62e-24 104
MS.gene35902.t1 MTR_6g014150 25.561 446 259 16 10 408 7 426 4.81e-24 104
MS.gene35902.t1 MTR_6g011340 25.330 454 259 14 10 412 10 434 5.58e-24 103
MS.gene35902.t1 MTR_4g082810 40.288 139 68 3 280 403 258 396 1.02e-23 102
MS.gene35902.t1 MTR_6g014290 24.944 449 260 17 10 410 10 429 1.40e-23 102
MS.gene35902.t1 MTR_1g107350 25.653 421 228 17 10 390 8 383 1.57e-23 102
MS.gene35902.t1 MTR_8g064880 23.788 433 227 10 10 390 9 390 2.00e-23 102
MS.gene35902.t1 MTR_5g035560 43.165 139 63 5 285 407 258 396 9.26e-23 100
MS.gene35902.t1 MTR_3g084530 40.385 156 75 4 265 405 251 403 1.29e-22 99.8
MS.gene35902.t1 MTR_5g016480 28.162 419 208 18 18 390 16 387 1.57e-22 99.8
MS.gene35902.t1 MTR_5g098930 25.000 416 229 12 14 391 9 379 1.71e-22 99.4
MS.gene35902.t1 MTR_6g014170 25.792 442 241 18 10 406 10 409 2.02e-22 99.4
MS.gene35902.t1 MTR_6g014187 24.413 426 242 13 10 390 10 400 4.40e-22 98.6
MS.gene35902.t1 MTR_5g090630 24.155 414 233 10 14 391 9 377 4.70e-22 98.2
MS.gene35902.t1 MTR_3g084520 39.375 160 70 7 274 407 258 416 5.08e-22 98.2
MS.gene35902.t1 MTR_7g080940 42.308 130 67 3 287 412 262 387 5.73e-22 97.8
MS.gene35902.t1 MTR_5g035580 42.336 137 63 5 287 407 262 398 5.78e-22 97.8
MS.gene35902.t1 MTR_7g080950 42.276 123 67 2 287 405 257 379 6.19e-22 97.8
MS.gene35902.t1 MTR_1g107365 40.310 129 73 2 287 412 303 430 6.65e-22 97.8
MS.gene35902.t1 MTR_3g084540 41.447 152 63 6 286 411 269 420 7.50e-22 97.8
MS.gene35902.t1 MTR_8g066610 25.909 440 238 17 10 405 9 404 8.19e-22 97.8
MS.gene35902.t1 MTR_1g107360 26.277 411 228 14 12 391 11 377 8.46e-22 97.4
MS.gene35902.t1 MTR_7g080935 41.538 130 68 3 287 412 262 387 2.66e-21 95.9
MS.gene35902.t1 MTR_4g082820 42.276 123 55 3 284 390 259 381 2.91e-21 95.9
MS.gene35902.t1 MTR_6g014050 25.352 426 258 13 10 400 11 411 5.45e-21 95.1
MS.gene35902.t1 MTR_5g090600 22.906 406 248 11 14 397 9 371 8.65e-21 94.4
MS.gene35902.t1 MTR_1g029540 38.583 127 61 3 283 392 250 376 2.20e-20 93.2
MS.gene35902.t1 MTR_8g008970 42.308 130 54 2 287 395 257 386 2.40e-20 94.0
MS.gene35902.t1 MTR_8g008970 40.870 115 62 2 287 395 596 710 7.83e-15 77.0
MS.gene35902.t1 MTR_8g090095 40.458 131 56 2 282 391 266 395 2.84e-20 93.2
MS.gene35902.t1 MTR_2g040530 33.544 158 74 3 285 411 257 414 3.12e-20 92.8
MS.gene35902.t1 MTR_5g045960 24.651 430 241 13 10 397 9 397 3.38e-20 92.8
MS.gene35902.t1 MTR_4g008630 39.370 127 60 3 283 392 253 379 3.76e-20 92.4
MS.gene35902.t1 MTR_1g107380 24.471 425 229 14 10 390 13 389 4.59e-20 92.4
MS.gene35902.t1 MTR_2g046750 34.591 159 71 4 285 411 258 415 4.63e-20 92.4
MS.gene35902.t1 MTR_7g102520 25.346 434 252 14 1 396 1 400 4.70e-20 92.4
MS.gene35902.t1 MTR_6g033625 25.355 422 230 16 16 395 8 386 5.27e-20 92.0
MS.gene35902.t1 MTR_8g027885 40.559 143 61 3 288 406 264 406 5.47e-20 92.0
MS.gene35902.t1 MTR_5g004940 44.348 115 53 2 287 390 197 311 5.86e-20 91.3
MS.gene35902.t1 MTR_8g064870 40.336 119 56 1 287 390 270 388 9.03e-20 91.7
MS.gene35902.t1 MTR_4g031800 42.735 117 53 2 287 390 264 379 1.05e-19 91.3
MS.gene35902.t1 MTR_3g009510 26.757 441 233 17 15 406 10 409 1.07e-19 91.3
MS.gene35902.t1 MTR_2g046820 34.810 158 70 3 285 410 255 411 1.32e-19 90.9
MS.gene35902.t1 MTR_4g094920 43.697 119 51 3 287 390 279 396 1.55e-19 90.9
MS.gene35902.t1 MTR_7g055710 24.318 440 254 16 10 412 11 408 1.65e-19 90.9
MS.gene35902.t1 MTR_7g011470 37.857 140 67 5 287 406 270 409 1.78e-19 90.5
MS.gene35902.t1 MTR_7g011470 37.398 123 68 1 287 400 274 396 1.81e-19 90.5
MS.gene35902.t1 MTR_8g027870 39.860 143 62 3 288 406 264 406 1.92e-19 90.5
MS.gene35902.t1 MTR_1g107315 41.739 115 56 1 287 390 269 383 2.32e-19 90.1
MS.gene35902.t1 MTR_8g009073 36.076 158 69 3 287 412 257 414 2.64e-19 90.1
MS.gene35902.t1 MTR_8g466240 24.771 436 263 14 1 412 1 395 3.14e-19 89.7
MS.gene35902.t1 MTR_8g009073 39.683 126 55 2 287 391 128 253 3.87e-19 88.2
MS.gene35902.t1 MTR_8g007585 36.986 146 70 6 287 411 200 344 4.18e-19 89.0
MS.gene35902.t1 MTR_7g117170 36.806 144 67 2 287 406 266 409 4.22e-19 89.4
MS.gene35902.t1 MTR_6g014300 23.373 415 244 13 10 390 12 386 4.85e-19 89.4
MS.gene35902.t1 MTR_4g064987 26.588 425 222 18 14 401 12 383 6.00e-19 89.0
MS.gene35902.t1 MTR_5g090580 35.417 144 67 3 275 397 254 392 6.32e-19 89.0
MS.gene35902.t1 MTR_6g033675 38.129 139 73 2 287 412 265 403 8.68e-19 88.6
MS.gene35902.t1 MTR_1g107375 39.200 125 71 2 287 407 264 387 8.89e-19 88.6
MS.gene35902.t1 MTR_5g031830 39.200 125 68 1 289 405 283 407 1.02e-18 88.2
MS.gene35902.t1 MTR_0288s0020 37.324 142 69 5 287 408 269 410 1.21e-18 88.2
MS.gene35902.t1 MTR_7g013200 35.211 142 75 2 287 411 250 391 1.23e-18 87.8
MS.gene35902.t1 MTR_5g031840 40.179 112 59 1 287 390 272 383 1.27e-18 87.8
MS.gene35902.t1 MTR_1g107285 37.209 129 78 1 287 412 271 399 1.31e-18 87.8
MS.gene35902.t1 MTR_8g012650 40.299 134 47 3 287 391 260 389 1.33e-18 87.8
MS.gene35902.t1 MTR_4g094220 39.007 141 63 4 287 405 286 425 1.56e-18 87.8
MS.gene35902.t1 MTR_8g077590 39.706 136 54 3 280 391 253 384 1.92e-18 87.4
MS.gene35902.t1 MTR_8g009067 35.443 158 70 3 287 412 257 414 2.02e-18 87.4
MS.gene35902.t1 MTR_6g033660 39.167 120 60 2 289 395 266 385 2.57e-18 87.0
MS.gene35902.t1 MTR_4g485640 37.778 135 66 4 287 405 457 589 2.58e-18 87.4
MS.gene35902.t1 MTR_8g006730 37.143 140 67 2 287 405 258 397 2.69e-18 87.0
MS.gene35902.t1 MTR_8g009055 38.636 132 58 2 287 395 257 388 2.70e-18 87.0
MS.gene35902.t1 MTR_5g031860 39.370 127 69 2 287 405 280 406 3.24e-18 86.7
MS.gene35902.t1 MTR_8g009067 38.889 126 56 2 287 391 139 264 3.34e-18 85.9
MS.gene35902.t1 MTR_7g102460 40.678 118 58 2 286 391 275 392 3.54e-18 86.7
MS.gene35902.t1 MTR_8g009063 40.441 136 50 3 287 395 264 395 4.85e-18 86.3
MS.gene35902.t1 MTR_8g006710 37.410 139 66 3 287 404 257 395 5.79e-18 85.9
MS.gene35902.t1 MTR_6g033725 40.164 122 60 3 287 395 262 383 8.78e-18 85.5
MS.gene35902.t1 MTR_5g045970 38.136 118 61 2 286 391 280 397 9.39e-18 85.5
MS.gene35902.t1 MTR_6g488280 34.014 147 72 3 287 412 256 398 9.82e-18 85.1
MS.gene35902.t1 MTR_0428s0010 34.014 147 72 3 287 412 256 398 9.82e-18 85.1
MS.gene35902.t1 MTR_1g019510 39.370 127 55 2 287 391 255 381 1.00e-17 85.1
MS.gene35902.t1 MTR_4g064987 37.500 128 67 2 287 401 250 377 1.05e-17 85.1
MS.gene35902.t1 MTR_8g043470 33.129 163 86 5 267 408 167 327 1.09e-17 84.7
MS.gene35902.t1 MTR_1g062380 38.983 118 60 2 286 391 281 398 1.25e-17 85.1
MS.gene35902.t1 MTR_1g032490 39.130 115 59 1 287 390 271 385 1.25e-17 85.1
MS.gene35902.t1 MTR_6g014160 24.074 324 189 8 87 400 85 361 2.30e-17 83.6
MS.gene35902.t1 MTR_4g485630 33.750 160 71 4 287 411 267 426 3.28e-17 83.6
MS.gene35902.t1 MTR_8g009050 35.000 160 70 3 287 412 257 416 3.69e-17 83.6
MS.gene35902.t1 MTR_8g008990 38.060 134 58 2 287 395 257 390 3.86e-17 83.6
MS.gene35902.t1 MTR_1g019520 37.313 134 56 3 287 395 4 134 3.98e-17 80.1
MS.gene35902.t1 MTR_5g090660 35.659 129 62 2 287 394 259 387 4.30e-17 83.6
MS.gene35902.t1 MTR_8g012635 36.496 137 59 4 287 397 260 394 4.44e-17 83.2
MS.gene35902.t1 MTR_7g013180 39.860 143 67 5 287 411 258 399 5.02e-17 83.2
MS.gene35902.t1 MTR_0891s0010 36.735 147 70 5 284 408 94 239 5.04e-17 81.3
MS.gene35902.t1 MTR_7g047030 35.507 138 65 3 275 391 249 383 5.81e-17 82.8
MS.gene35902.t1 MTR_7g047270 35.507 138 65 3 275 391 249 383 5.81e-17 82.8
MS.gene35902.t1 MTR_5g070090 38.356 146 66 5 287 410 267 410 5.99e-17 82.8
MS.gene35902.t1 MTR_0184s0040 36.232 138 64 3 275 391 264 398 6.54e-17 82.8
MS.gene35902.t1 MTR_0078s0190 36.232 138 64 3 275 391 264 398 6.54e-17 82.8
MS.gene35902.t1 MTR_5g070040 41.600 125 55 4 287 395 267 389 6.61e-17 82.8
MS.gene35902.t1 MTR_7g013220 34.783 138 73 2 287 407 261 398 7.81e-17 82.4
MS.gene35902.t1 MTR_8g012730 37.209 129 54 3 289 391 99 226 8.57e-17 80.9
MS.gene35902.t1 MTR_5g027210 34.074 135 64 2 287 396 275 409 8.82e-17 82.4
MS.gene35902.t1 MTR_6g023665 34.014 147 72 3 287 412 263 405 8.87e-17 82.4
MS.gene35902.t1 MTR_7g070860 38.889 126 71 2 287 412 268 387 9.25e-17 82.4
MS.gene35902.t1 MTR_7g013260 35.000 140 74 2 287 409 251 390 1.10e-16 82.0
MS.gene35902.t1 MTR_5g090670 30.380 158 78 2 266 391 231 388 1.14e-16 82.0
MS.gene35902.t1 MTR_5g090620 34.646 127 61 2 287 391 261 387 1.29e-16 82.0
MS.gene35902.t1 MTR_4g118000 34.074 135 75 2 287 407 256 390 1.53e-16 81.6
MS.gene35902.t1 MTR_7g102490 39.496 119 58 3 286 391 277 394 1.62e-16 81.6
MS.gene35902.t1 MTR_3g479610 36.806 144 68 5 287 408 120 262 1.63e-16 80.5
MS.gene35902.t1 MTR_6g014190 39.640 111 58 2 289 390 97 207 1.84e-16 79.7
MS.gene35902.t1 MTR_0536s0020 36.719 128 63 3 287 396 265 392 1.91e-16 81.6
MS.gene35902.t1 MTR_8g068360 24.000 450 228 18 10 406 12 400 2.25e-16 81.3
MS.gene35902.t1 MTR_6g014240 36.170 141 68 5 287 406 255 394 2.26e-16 81.3
MS.gene35902.t1 MTR_7g070910 23.991 446 249 18 10 412 11 409 2.43e-16 81.3
MS.gene35902.t1 MTR_7g013240 35.507 138 72 2 287 407 250 387 2.43e-16 80.9
MS.gene35902.t1 MTR_8g012745 35.938 128 59 2 287 391 260 387 2.60e-16 80.9
MS.gene35902.t1 MTR_0078s0060 39.683 126 55 4 287 391 257 382 2.69e-16 80.9
MS.gene35902.t1 MTR_4g485590 35.556 135 74 2 287 412 247 377 3.30e-16 80.5
MS.gene35902.t1 MTR_6g013680 25.806 341 192 12 61 380 12 312 3.63e-16 80.1
MS.gene35902.t1 MTR_3g069710 35.385 130 73 1 287 405 258 387 3.93e-16 80.5
MS.gene35902.t1 MTR_0078s0010 34.783 138 66 3 275 391 249 383 3.95e-16 80.5
MS.gene35902.t1 MTR_7g067120 37.302 126 74 3 287 407 241 366 4.01e-16 80.1
MS.gene35902.t1 MTR_4g485620 37.500 136 70 4 287 412 254 384 4.36e-16 80.1
MS.gene35902.t1 MTR_6g005600 37.692 130 57 2 286 391 256 385 4.38e-16 80.5
MS.gene35902.t1 MTR_0536s0010 36.800 125 65 2 286 396 265 389 5.31e-16 80.1
MS.gene35902.t1 MTR_4g024020 37.815 119 60 3 286 391 277 394 5.58e-16 80.1
MS.gene35902.t1 MTR_2g035020 23.272 434 250 16 14 407 15 405 6.43e-16 79.7
MS.gene35902.t1 MTR_0477s0010 37.168 113 62 1 287 390 125 237 7.26e-16 78.6
MS.gene35902.t1 MTR_8g068330 33.588 131 75 1 288 406 267 397 1.14e-15 79.0
MS.gene35902.t1 MTR_7g070800 38.571 140 66 5 287 412 267 400 1.30e-15 79.0
MS.gene35902.t1 MTR_5g090610 31.373 153 74 2 260 391 230 372 1.40e-15 78.6
MS.gene35902.t1 MTR_4g117950 32.353 136 78 3 286 407 251 386 1.71e-15 78.6
MS.gene35902.t1 MTR_7g102560 36.752 117 62 1 287 391 273 389 1.72e-15 78.6
MS.gene35902.t1 MTR_0036s0220 39.024 123 66 2 287 400 286 408 1.81e-15 78.6
MS.gene35902.t1 MTR_0036s0220 30.233 172 98 6 10 160 12 182 1.19e-11 66.6
MS.gene35902.t1 MTR_8g006260 32.692 156 72 3 289 411 263 418 2.01e-15 78.2
MS.gene35902.t1 MTR_0184s0030 33.835 133 66 1 287 397 259 391 2.78e-15 77.8
MS.gene35902.t1 MTR_4g117980 34.783 138 73 3 287 407 268 405 2.78e-15 77.8
MS.gene35902.t1 MTR_8g068340 38.739 111 56 3 288 386 271 381 3.13e-15 77.8
MS.gene35902.t1 MTR_5g016660 36.429 140 71 3 286 412 275 409 3.30e-15 77.8
MS.gene35902.t1 MTR_7g070660 36.691 139 72 4 286 412 269 403 3.67e-15 77.4
MS.gene35902.t1 MTR_6g033615 38.525 122 62 3 287 395 251 372 4.38e-15 77.0
MS.gene35902.t1 MTR_7g046490 36.719 128 58 3 287 391 254 381 5.54e-15 77.0
MS.gene35902.t1 MTR_7g117405 37.069 116 64 1 285 391 272 387 5.71e-15 77.0
MS.gene35902.t1 MTR_7g070760 36.220 127 63 2 286 412 89 197 6.17e-15 73.6
MS.gene35902.t1 MTR_7g470610 35.252 139 74 3 286 412 131 265 6.21e-15 75.1
MS.gene35902.t1 MTR_7g070583 35.252 139 74 3 286 412 131 265 6.21e-15 75.1
MS.gene35902.t1 MTR_8g044140 35.606 132 72 2 287 405 240 371 7.35e-15 76.6
MS.gene35902.t1 MTR_2g035040 33.333 138 75 3 287 407 173 310 8.29e-15 75.9
MS.gene35902.t1 MTR_7g070610 37.288 118 60 2 286 390 276 392 8.45e-15 76.3
MS.gene35902.t1 MTR_3g479470 32.857 140 74 3 287 406 288 427 8.76e-15 76.3
MS.gene35902.t1 MTR_6g035185 32.143 140 72 4 289 407 270 407 1.15e-14 75.9
MS.gene35902.t1 MTR_4g117960 33.813 139 74 3 287 407 266 404 1.59e-14 75.5
MS.gene35902.t1 MTR_7g070780 33.094 139 77 3 286 412 274 408 2.12e-14 75.1
MS.gene35902.t1 MTR_5g019580 32.836 134 65 2 287 395 289 422 2.72e-14 75.1
MS.gene35902.t1 MTR_5g019580 32.836 134 65 2 287 395 265 398 3.09e-14 74.7
MS.gene35902.t1 MTR_7g070740 36.170 141 70 5 286 412 274 408 3.23e-14 74.7
MS.gene35902.t1 MTR_2g034990 31.884 138 77 2 287 407 268 405 3.27e-14 74.7
MS.gene35902.t1 MTR_6g035265 32.143 140 76 3 287 407 259 398 3.43e-14 74.3
MS.gene35902.t1 MTR_7g070810 34.965 143 77 3 282 412 260 398 3.78e-14 74.3
MS.gene35902.t1 MTR_7g071040 34.532 139 73 3 287 412 282 415 4.10e-14 74.3
MS.gene35902.t1 MTR_2g098430 31.655 139 75 2 288 407 268 405 4.60e-14 74.3
MS.gene35902.t1 MTR_7g067330 33.607 122 77 2 287 404 241 362 4.69e-14 73.9
MS.gene35902.t1 MTR_7g070940 35.172 145 74 5 282 412 259 397 5.56e-14 73.9
MS.gene35902.t1 MTR_3g069690 34.400 125 71 1 287 400 255 379 6.49e-14 73.6
MS.gene35902.t1 MTR_4g117890 31.915 141 74 3 287 407 260 398 6.72e-14 73.6
MS.gene35902.t1 MTR_7g059175 43.421 76 43 0 208 283 28 103 7.48e-14 67.8
MS.gene35902.t1 MTR_8g071070 33.846 130 71 3 287 401 269 398 7.70e-14 73.6
MS.gene35902.t1 MTR_5g087620 37.795 127 60 2 287 395 285 410 7.97e-14 73.6
MS.gene35902.t1 MTR_4g128690 33.945 109 67 1 287 390 264 372 8.90e-14 73.2
MS.gene35902.t1 MTR_7g102450 36.441 118 62 2 287 391 260 377 1.00e-13 73.2
MS.gene35902.t1 MTR_7g012120 33.333 138 75 2 287 407 270 407 1.02e-13 73.2
MS.gene35902.t1 MTR_8g009840 38.938 113 44 3 304 391 333 445 1.07e-13 73.2
MS.gene35902.t1 MTR_0009s0240 33.588 131 70 3 287 401 259 388 1.17e-13 72.8
MS.gene35902.t1 MTR_8g056740 33.582 134 77 3 287 412 168 297 1.27e-13 72.4
MS.gene35902.t1 MTR_6g078320 32.174 115 63 2 287 386 279 393 1.76e-13 72.4
MS.gene35902.t1 MTR_4g108250 34.586 133 71 3 287 405 279 409 1.92e-13 72.4
MS.gene35902.t1 MTR_7g070930 35.000 140 71 5 287 412 279 412 2.12e-13 72.0
MS.gene35902.t1 MTR_1g040310 35.115 131 72 3 287 405 277 406 3.30e-13 71.6
MS.gene35902.t1 MTR_5g029800 23.649 444 232 18 14 407 15 401 4.48e-13 71.2
MS.gene35902.t1 MTR_2g059240 32.174 115 72 2 289 397 280 394 5.25e-13 70.9
MS.gene35902.t1 MTR_7g070870 36.290 124 63 4 282 391 267 388 6.81e-13 70.5
MS.gene35902.t1 MTR_6g035295 36.207 116 61 2 288 391 278 392 6.82e-13 70.5
MS.gene35902.t1 MTR_5g039900 34.351 131 73 2 287 405 277 406 6.92e-13 70.5
MS.gene35902.t1 MTR_7g102550 35.246 122 67 2 287 396 275 396 1.56e-12 69.3
MS.gene35902.t1 MTR_3g009490 38.655 119 48 4 313 406 3 121 2.17e-12 65.9
MS.gene35902.t1 MTR_7g080960 31.933 119 57 1 287 405 325 419 2.17e-12 68.9
MS.gene35902.t1 MTR_8g032950 31.746 126 68 2 289 396 268 393 2.62e-12 68.6
MS.gene35902.t1 MTR_8g007650 30.636 173 108 3 244 404 225 397 6.77e-12 67.4
MS.gene35902.t1 MTR_2086s0010 31.707 123 63 3 310 411 2 124 1.28e-11 63.5
MS.gene35902.t1 MTR_1996s0010 31.707 123 63 3 310 411 2 124 1.28e-11 63.5
MS.gene35902.t1 MTR_5g090690 29.565 115 60 1 287 380 191 305 2.08e-11 65.5
MS.gene35902.t1 MTR_8g007565 30.058 173 109 3 244 404 225 397 2.53e-11 65.5
MS.gene35902.t1 MTR_5g066390 34.906 106 47 6 323 406 57 162 2.73e-11 63.2
MS.gene35902.t1 MTR_7g071050 33.571 140 73 4 287 412 231 364 3.82e-11 65.1
MS.gene35902.t1 MTR_5g067170 33.884 121 63 2 287 390 266 386 5.80e-11 64.7
MS.gene35902.t1 MTR_1g056190 30.000 140 87 4 148 283 20 152 8.88e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35902.t1 AT2G30150 41.505 412 189 8 5 403 8 380 5.30e-98 300
MS.gene35902.t1 AT2G30150 41.687 403 183 8 14 403 1 364 1.35e-95 293
MS.gene35902.t1 AT2G30140 48.241 199 88 4 2 185 5 203 2.46e-51 179
MS.gene35902.t1 AT2G30140 54.676 139 51 3 284 410 256 394 2.79e-42 154
MS.gene35902.t1 AT2G30140 47.500 200 89 3 2 185 5 204 7.97e-51 177
MS.gene35902.t1 AT2G30140 54.676 139 51 3 284 410 257 395 2.93e-42 154
MS.gene35902.t1 AT3G21560 28.271 428 226 14 1 390 3 387 7.68e-35 135
MS.gene35902.t1 AT1G24100 29.783 460 217 22 2 411 3 406 4.95e-34 132
MS.gene35902.t1 AT1G78270 27.828 442 251 12 10 408 13 429 8.37e-32 126
MS.gene35902.t1 AT1G05675 28.276 435 234 19 9 407 5 397 8.35e-31 123
MS.gene35902.t1 AT2G36970 23.310 429 252 8 1 391 1 390 8.71e-30 120
MS.gene35902.t1 AT4G15490 26.128 421 234 16 5 390 3 381 4.10e-29 119
MS.gene35902.t1 AT1G22340 25.169 445 260 15 10 408 13 430 5.85e-29 118
MS.gene35902.t1 AT1G05680 28.186 408 224 14 9 390 5 369 8.67e-29 117
MS.gene35902.t1 AT1G22400 27.027 444 249 15 10 406 13 428 3.85e-28 116
MS.gene35902.t1 AT1G22370 25.592 422 234 13 10 390 13 395 8.03e-27 112
MS.gene35902.t1 AT2G28080 25.182 413 233 10 14 391 22 393 9.23e-27 112
MS.gene35902.t1 AT2G31790 27.040 429 247 17 10 407 8 401 1.89e-26 110
MS.gene35902.t1 AT2G31750 25.734 443 239 16 10 411 8 401 2.51e-26 110
MS.gene35902.t1 AT2G31750 25.734 443 239 16 10 411 8 401 3.57e-26 110
MS.gene35902.t1 AT4G15480 25.943 424 222 17 10 390 19 393 5.14e-26 110
MS.gene35902.t1 AT4G15500 25.845 414 237 15 6 390 5 377 2.06e-25 108
MS.gene35902.t1 AT4G15550 42.276 123 56 1 283 390 265 387 9.57e-24 103
MS.gene35902.t1 AT3G46670 23.636 440 260 12 1 409 1 395 1.72e-23 102
MS.gene35902.t1 AT1G10400 43.802 121 62 3 280 394 262 382 3.81e-22 98.6
MS.gene35902.t1 AT2G43840 44.681 141 59 8 288 411 256 394 7.91e-22 97.4
MS.gene35902.t1 AT2G43840 44.681 141 59 8 288 411 256 394 7.91e-22 97.4
MS.gene35902.t1 AT3G02100 26.116 448 237 19 10 412 13 411 1.02e-21 97.4
MS.gene35902.t1 AT3G53150 25.522 431 246 13 10 401 22 416 1.56e-21 97.1
MS.gene35902.t1 AT1G01420 25.909 440 212 18 10 394 11 391 3.26e-21 95.9
MS.gene35902.t1 AT5G14860 38.776 147 63 5 283 405 272 415 3.61e-21 95.9
MS.gene35902.t1 AT1G01420 25.909 440 212 18 10 394 8 388 4.09e-21 95.5
MS.gene35902.t1 AT2G23250 41.667 132 71 3 282 407 237 368 5.13e-21 95.1
MS.gene35902.t1 AT1G51210 24.641 418 238 13 10 401 20 386 5.55e-21 94.7
MS.gene35902.t1 AT3G46720 41.593 113 62 1 287 395 254 366 7.76e-21 94.4
MS.gene35902.t1 AT2G43820 43.750 112 55 2 285 390 253 362 9.93e-21 94.4
MS.gene35902.t1 AT5G38010 39.535 129 68 2 287 405 261 389 4.15e-20 92.4
MS.gene35902.t1 AT3G46660 40.000 130 67 1 287 405 262 391 4.46e-20 92.4
MS.gene35902.t1 AT2G23260 40.157 127 70 2 287 407 260 386 4.58e-20 92.4
MS.gene35902.t1 AT3G53160 40.650 123 61 2 287 397 273 395 4.77e-20 92.4
MS.gene35902.t1 AT1G05560 34.000 150 71 3 286 407 298 447 1.06e-19 91.7
MS.gene35902.t1 AT1G05560 34.000 150 71 3 286 407 248 397 1.22e-19 91.3
MS.gene35902.t1 AT5G59580 37.692 130 70 1 287 405 254 383 1.31e-19 90.9
MS.gene35902.t1 AT5G03490 39.024 123 72 2 282 401 268 390 1.44e-19 90.9
MS.gene35902.t1 AT2G36780 40.171 117 58 2 287 391 279 395 2.49e-19 90.5
MS.gene35902.t1 AT1G01390 38.562 153 62 5 287 412 259 406 2.97e-19 90.1
MS.gene35902.t1 AT3G46680 37.500 120 64 1 287 395 256 375 3.07e-19 89.7
MS.gene35902.t1 AT1G01390 38.562 153 62 5 287 412 276 423 3.08e-19 90.1
MS.gene35902.t1 AT2G29740 39.200 125 63 2 283 395 271 394 4.07e-19 89.7
MS.gene35902.t1 AT2G36750 41.026 117 57 2 287 391 274 390 4.51e-19 89.4
MS.gene35902.t1 AT5G38040 41.228 114 57 2 287 390 257 370 5.24e-19 89.0
MS.gene35902.t1 AT2G36790 25.227 440 213 18 10 391 13 394 1.13e-18 88.2
MS.gene35902.t1 AT2G16890 36.774 155 70 6 282 411 264 415 1.55e-18 87.4
MS.gene35902.t1 AT2G36770 39.316 117 59 2 287 391 279 395 1.64e-18 87.8
MS.gene35902.t1 AT2G16890 36.774 155 70 6 282 411 264 415 1.87e-18 87.4
MS.gene35902.t1 AT5G59590 36.154 130 72 1 287 405 256 385 2.07e-18 87.4
MS.gene35902.t1 AT3G46700 36.667 120 65 1 287 395 251 370 2.71e-18 87.0
MS.gene35902.t1 AT1G05530 33.333 150 72 3 286 407 251 400 2.76e-18 87.0
MS.gene35902.t1 AT4G34138 38.017 121 64 2 287 396 279 399 3.11e-18 87.0
MS.gene35902.t1 AT5G37950 39.450 109 56 2 287 385 227 335 3.45e-18 85.5
MS.gene35902.t1 AT5G37950 39.450 109 56 2 287 385 233 341 3.56e-18 85.5
MS.gene35902.t1 AT3G46690 36.667 120 65 1 287 395 256 375 6.39e-18 85.9
MS.gene35902.t1 AT3G55710 36.434 129 71 1 288 405 262 390 6.43e-18 85.9
MS.gene35902.t1 AT2G15480 38.017 121 64 2 287 396 279 399 6.65e-18 85.9
MS.gene35902.t1 AT2G36800 38.462 117 60 2 287 391 278 394 7.04e-18 85.9
MS.gene35902.t1 AT2G15480 38.017 121 64 2 287 396 279 399 7.31e-18 85.9
MS.gene35902.t1 AT1G07260 38.710 124 65 1 283 395 268 391 7.79e-18 85.9
MS.gene35902.t1 AT1G07250 40.323 124 61 2 283 394 269 391 9.28e-18 85.5
MS.gene35902.t1 AT3G21790 39.844 128 58 2 287 395 266 393 1.32e-17 85.1
MS.gene35902.t1 AT3G16520 40.323 124 59 3 287 395 261 384 1.42e-17 84.7
MS.gene35902.t1 AT3G16520 40.323 124 59 3 287 395 261 384 1.49e-17 84.7
MS.gene35902.t1 AT3G16520 40.323 124 59 3 287 395 261 384 1.71e-17 84.3
MS.gene35902.t1 AT4G34135 36.975 119 66 1 287 396 280 398 2.06e-17 84.3
MS.gene35902.t1 AT3G55700 40.000 110 55 1 288 386 258 367 2.17e-17 84.3
MS.gene35902.t1 AT5G65550 39.316 117 61 3 288 395 269 384 2.23e-17 84.3
MS.gene35902.t1 AT2G15490 39.669 121 62 3 287 396 276 396 2.43e-17 84.3
MS.gene35902.t1 AT3G46650 33.099 142 73 3 287 406 239 380 3.26e-17 83.6
MS.gene35902.t1 AT2G15490 37.097 124 64 2 287 396 276 399 5.62e-17 83.2
MS.gene35902.t1 AT2G29750 39.024 123 64 2 283 394 271 393 6.62e-17 82.8
MS.gene35902.t1 AT2G36760 37.607 117 61 2 287 391 279 395 8.30e-17 82.8
MS.gene35902.t1 AT2G26480 34.646 127 71 1 287 401 251 377 1.00e-16 82.0
MS.gene35902.t1 AT5G05900 39.024 123 71 1 287 405 261 383 1.13e-16 82.0
MS.gene35902.t1 AT5G26310 34.586 133 61 2 288 394 255 387 1.18e-16 82.0
MS.gene35902.t1 AT2G18570 37.209 129 62 2 288 397 259 387 1.53e-16 81.6
MS.gene35902.t1 AT2G29730 36.667 120 67 2 283 394 262 380 2.04e-16 81.3
MS.gene35902.t1 AT4G34131 37.500 120 65 1 287 396 279 398 2.10e-16 81.3
MS.gene35902.t1 AT2G29710 37.931 116 64 2 287 394 265 380 2.52e-16 80.9
MS.gene35902.t1 AT3G21780 39.370 127 58 2 287 394 257 383 2.52e-16 81.3
MS.gene35902.t1 AT4G15260 36.250 160 72 4 283 412 138 297 4.37e-16 79.7
MS.gene35902.t1 AT5G49690 38.525 122 63 4 288 401 266 383 4.85e-16 80.1
MS.gene35902.t1 AT3G21750 37.681 138 65 2 278 394 246 383 5.65e-16 80.1
MS.gene35902.t1 AT1G07240 37.815 119 63 2 287 394 272 390 8.51e-16 79.3
MS.gene35902.t1 AT5G05880 35.385 130 73 1 287 405 255 384 1.14e-15 79.0
MS.gene35902.t1 AT3G21760 37.692 130 62 2 287 397 269 398 1.30e-15 79.0
MS.gene35902.t1 AT4G14090 34.483 145 73 6 286 409 258 401 1.54e-15 78.6
MS.gene35902.t1 AT2G18560 37.984 129 61 2 288 397 169 297 1.58e-15 78.2
MS.gene35902.t1 AT4G15280 35.714 154 69 4 287 410 294 447 1.68e-15 78.6
MS.gene35902.t1 AT3G22250 25.060 419 258 13 14 405 12 401 1.93e-15 78.2
MS.gene35902.t1 AT4G36770 33.566 143 63 3 287 401 254 392 1.96e-15 78.2
MS.gene35902.t1 AT1G22360 33.858 127 75 1 287 404 285 411 2.07e-15 78.2
MS.gene35902.t1 AT1G22360 29.448 163 96 4 9 152 9 171 2.51e-12 68.9
MS.gene35902.t1 AT1G22360 33.858 127 75 1 287 404 285 411 2.15e-15 78.2
MS.gene35902.t1 AT1G22360 29.448 163 96 4 9 152 9 171 2.55e-12 68.9
MS.gene35902.t1 AT5G05870 24.711 433 241 14 9 405 7 390 2.17e-15 78.2
MS.gene35902.t1 AT4G15280 35.714 154 69 4 287 410 262 415 2.19e-15 78.2
MS.gene35902.t1 AT3G11340 36.154 130 72 1 287 405 251 380 2.77e-15 77.8
MS.gene35902.t1 AT5G05890 22.917 432 246 10 10 405 8 388 6.14e-15 76.6
MS.gene35902.t1 AT1G22380 34.783 138 70 4 289 406 290 427 7.32e-15 76.6
MS.gene35902.t1 AT1G22380 30.286 175 99 7 10 163 13 185 9.61e-12 67.0
MS.gene35902.t1 AT3G21800 37.795 127 60 2 287 394 263 389 8.58e-15 76.3
MS.gene35902.t1 AT1G73880 24.471 425 240 19 9 397 13 392 1.04e-14 76.3
MS.gene35902.t1 AT5G05860 33.582 134 70 2 287 405 254 383 4.52e-14 73.9
MS.gene35902.t1 AT1G22370 36.283 113 63 2 287 390 113 225 1.78e-13 71.2
MS.gene35902.t1 AT5G12890 34.127 126 65 2 289 396 276 401 1.43e-11 66.6
MS.gene35902.t1 AT5G17050 32.743 113 63 2 287 390 268 376 2.35e-11 65.9
MS.gene35902.t1 AT1G30530 31.746 126 73 2 289 405 264 385 4.72e-11 64.7
MS.gene35902.t1 AT5G17030 31.724 145 87 3 266 405 253 390 6.71e-11 64.3

Find 101 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCAATCTTCAAAATTTAT+TGG 0.163498 5.1:-56006129 None:intergenic
TTGAAGTTGTGTTGGGATTT+TGG 0.164465 5.1:+56004608 MS.gene35902:CDS
TGGGCACATGGGATTGGTTT+TGG 0.210340 5.1:+56005990 MS.gene35902:CDS
ATTCTTCTATTGGTGGATTT+TGG 0.224666 5.1:+56006043 MS.gene35902:CDS
TTGAATGTTCATCACAAATA+TGG 0.230893 5.1:+56004692 MS.gene35902:CDS
AACAAGGATGTTATTGTTCT+TGG 0.234090 5.1:-56003858 None:intergenic
ACAAAGGAAGGTGTTATTTC+TGG 0.249701 5.1:+56006087 MS.gene35902:CDS
CACTACCCTGTGCGAAATTC+AGG 0.263011 5.1:+56004193 MS.gene35902:CDS
GGGTTGATGTGGCCTCTTGC+AGG 0.267247 5.1:-56003806 None:intergenic
GAGAGTAGAGGAAGATGTTA+AGG 0.274076 5.1:+56006158 MS.gene35902:CDS
AAGCTGATGTTGTCGGGTTT+TGG 0.282585 5.1:-56003926 None:intergenic
AAAGATGGAAGAACCCTTTA+AGG 0.293468 5.1:+56004000 MS.gene35902:CDS
TCTCTTACACCACCATCTTT+TGG 0.293493 5.1:+56004159 MS.gene35902:CDS
CCCAAAGAAACCATGCAAAA+AGG 0.305287 5.1:-56004531 None:intergenic
ATATTCCGGTAGCGTCGTTT+TGG 0.312238 5.1:+56004110 MS.gene35902:CDS
TAGGTTAAGTAGCTCCTTAA+AGG 0.313254 5.1:-56004014 None:intergenic
GATGAACATTCAAATCCTTT+TGG 0.315881 5.1:-56004682 None:intergenic
AACACCTTCTTCGTAGAGAT+TGG 0.323022 5.1:+56004735 MS.gene35902:CDS
TTTATTGGAAAAGTCCAAAA+AGG 0.323041 5.1:-56006114 None:intergenic
TATATGATACCATGTTGTAT+TGG 0.361807 5.1:+56004062 MS.gene35902:CDS
AGTTCTGAAGGAACGACGTT+GGG 0.379676 5.1:-56003959 None:intergenic
ATATGATACCATGTTGTATT+GGG 0.386560 5.1:+56004063 MS.gene35902:CDS
GTGTTGTCACATTCTTCTAT+TGG 0.395821 5.1:+56006033 MS.gene35902:CDS
CAAAGGAAGGTGTTATTTCT+GGG 0.411811 5.1:+56006088 MS.gene35902:CDS
AGAAATAACACCTTCCTTTG+TGG 0.413743 5.1:-56006085 None:intergenic
GAACGGAAGCTGATGTTGTC+GGG 0.427580 5.1:-56003932 None:intergenic
AGAGTAGAGGAAGATGTTAA+GGG 0.432858 5.1:+56006159 MS.gene35902:CDS
TTGTCACATTCTTCTATTGG+TGG 0.434115 5.1:+56006036 MS.gene35902:CDS
GTCGTTCCTTCAGAACTCAT+TGG 0.436492 5.1:+56003965 MS.gene35902:CDS
ACACCTTCTTCGTAGAGATT+GGG 0.447383 5.1:+56004736 MS.gene35902:CDS
ATGTGGCCTCTTGCAGGGTA+AGG 0.450283 5.1:-56003800 None:intergenic
AGGTTAAGTAGCTCCTTAAA+GGG 0.450421 5.1:-56004013 None:intergenic
TCGTTCCTTCAGAACTCATT+GGG 0.456339 5.1:+56003966 MS.gene35902:CDS
CAAGGTTGAAAGAAATTTGT+GGG 0.469604 5.1:+56005971 MS.gene35902:CDS
CCATGGTTTGAAGTTGTGTT+GGG 0.471527 5.1:+56004601 MS.gene35902:CDS
AAGAGGATAGAGGACATATC+AGG 0.472484 5.1:-56004866 None:intergenic
TTGAAGGAGGATTGTCAAGT+AGG 0.473537 5.1:-56004033 None:intergenic
AATGTGACAACACTCTCAAT+TGG 0.474430 5.1:-56006023 None:intergenic
AATTTGTGGGCACATGGGAT+TGG 0.477446 5.1:+56005984 MS.gene35902:CDS
TGTTGTTGACCTCATCCAAA+AGG 0.478646 5.1:+56004667 MS.gene35902:CDS
TGGAAATCGAAGGAATATTC+CGG 0.485560 5.1:+56004096 MS.gene35902:CDS
GAAAGAAATTTGTGGGCACA+TGG 0.495955 5.1:+56005978 MS.gene35902:CDS
AGTGTGTGGTTGAAGGAAGT+TGG 0.498359 5.1:-56003770 None:intergenic
CACCCATGACATCTGCTAAG+AGG 0.500263 5.1:-56004883 None:intergenic
TGGGATCGCGATGACAAAGA+TGG 0.511902 5.1:+56003985 MS.gene35902:CDS
TTGGGTTGGGTTGAGAGTAG+AGG 0.512075 5.1:+56006146 MS.gene35902:CDS
ACCATGGTTTGAAGTTGTGT+TGG 0.516028 5.1:+56004600 MS.gene35902:CDS
TGTTTACCTGAATTTCGCAC+AGG 0.516434 5.1:-56004199 None:intergenic
GAGCTTGCATAGGTTCATCA+TGG 0.517698 5.1:-56003828 None:intergenic
ACAAGGTTGAAAGAAATTTG+TGG 0.523744 5.1:+56005970 MS.gene35902:CDS
GCCTCTTGCAGGGTAAGGCA+TGG 0.527181 5.1:-56003795 None:intergenic
ATTGTCCAAAACGACGCTAC+CGG 0.527945 5.1:-56004115 None:intergenic
CATTTGTTGTCAGTGAGGAA+TGG 0.534161 5.1:+56003882 MS.gene35902:CDS
CGAACGGAAGCTGATGTTGT+CGG 0.535022 5.1:-56003933 None:intergenic
TATCCTCTTAGCAGATGTCA+TGG 0.536421 5.1:+56004880 MS.gene35902:CDS
AGCTTGCATAGGTTCATCAT+GGG 0.540011 5.1:-56003827 None:intergenic
ATCCTCTTAGCAGATGTCAT+GGG 0.540935 5.1:+56004881 MS.gene35902:CDS
GGTTCATCATGGGGTTGATG+TGG 0.542153 5.1:-56003817 None:intergenic
TGGCTTGATTCACAACCCAT+TGG 0.545647 5.1:+56005826 MS.gene35902:CDS
CATGGCTAGTGTGTGGTTGA+AGG 0.548929 5.1:-56003777 None:intergenic
GGTTGATGTGGCCTCTTGCA+GGG 0.551855 5.1:-56003805 None:intergenic
GTATCATATATAATGATTGA+AGG 0.552301 5.1:-56004049 None:intergenic
CCACCCAATCTCTACGAAGA+AGG 0.552499 5.1:-56004739 None:intergenic
TATGTAAAGAACAGAACCAA+TGG 0.556286 5.1:-56005842 None:intergenic
ATGTAAAGAACAGAACCAAT+GGG 0.557405 5.1:-56005841 None:intergenic
TTGTATTGGGCTGTTGTCGT+TGG 0.563727 5.1:+56004076 MS.gene35902:CDS
CACTGACAACAAATGTAACA+AGG 0.567368 5.1:-56003874 None:intergenic
GACATCTGCTAAGAGGATAG+AGG 0.567427 5.1:-56004876 None:intergenic
TGGAGACAAGGAGCTTGCAT+AGG 0.568649 5.1:-56003838 None:intergenic
ATCTCAGCATGGAGGATGCA+AGG 0.569117 5.1:-56004566 None:intergenic
TGTTATTGTTCTTGGAGACA+AGG 0.586183 5.1:-56003850 None:intergenic
TTTACGACATACTTTGCATG+AGG 0.590039 5.1:+56004766 MS.gene35902:CDS
TAGCTCGTGGAGAAGCTACA+AGG 0.590823 5.1:+56005953 MS.gene35902:CDS
CCTTCTTCGTAGAGATTGGG+TGG 0.593174 5.1:+56004739 MS.gene35902:CDS
GCGATCCCAATGAGTTCTGA+AGG 0.595656 5.1:-56003971 None:intergenic
GGTTGGAATTCCACAAAGGA+AGG 0.607068 5.1:+56006075 MS.gene35902:CDS
GAACGACGTTGGGGATCGAA+CGG 0.607662 5.1:-56003949 None:intergenic
CAAATATGGATATTTAGTCA+TGG 0.613676 5.1:+56004706 MS.gene35902:CDS
GGATAGAGGACATATCAGGA+GGG 0.617992 5.1:-56004862 None:intergenic
GCCATGCCTTACCCTGCAAG+AGG 0.619433 5.1:+56003794 MS.gene35902:CDS
CAACAAATAGCTACATTGAG+TGG 0.621116 5.1:+56005806 MS.gene35902:intron
GTGTGGTTGAAGGAAGTTGG+TGG 0.621647 5.1:-56003767 None:intergenic
TGTTACATTTGTTGTCAGTG+AGG 0.625066 5.1:+56003877 MS.gene35902:CDS
AAAGAAATTTGTGGGCACAT+GGG 0.625283 5.1:+56005979 MS.gene35902:CDS
GATAGAGGACATATCAGGAG+GGG 0.633947 5.1:-56004861 None:intergenic
TCATATATAATGATTGAAGG+AGG 0.636319 5.1:-56004046 None:intergenic
TTACGACATACTTTGCATGA+GGG 0.640088 5.1:+56004767 MS.gene35902:CDS
CCCAACACAACTTCAAACCA+TGG 0.640399 5.1:-56004601 None:intergenic
AAAGGAAGGTGTTATTTCTG+GGG 0.644065 5.1:+56006089 MS.gene35902:CDS
AGGATAGAGGACATATCAGG+AGG 0.648151 5.1:-56004863 None:intergenic
GAGTTCTGAAGGAACGACGT+TGG 0.652005 5.1:-56003960 None:intergenic
GTTCTGAAGGAACGACGTTG+GGG 0.652924 5.1:-56003958 None:intergenic
TCTGTTCTTTACATAGCACA+AGG 0.659909 5.1:+56005850 MS.gene35902:CDS
CTGTTGTCGTTGGAAATCGA+AGG 0.660156 5.1:+56004086 MS.gene35902:CDS
ATAAACCTAAAATCTCAGCA+TGG 0.668161 5.1:-56004577 None:intergenic
GCTTGCATAGGTTCATCATG+GGG 0.680461 5.1:-56003826 None:intergenic
GTTTACCTGAATTTCGCACA+GGG 0.680898 5.1:-56004198 None:intergenic
AACCTAAAATCTCAGCATGG+AGG 0.683832 5.1:-56004574 None:intergenic
GGTAAGGCATGGCTAGTGTG+TGG 0.684607 5.1:-56003784 None:intergenic
GACAACAGCCCAATACAACA+TGG 0.726433 5.1:-56004071 None:intergenic
CTGTGGTTGGAATTCCACAA+AGG 0.726776 5.1:+56006071 MS.gene35902:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAATATCAATAAGTT+TGG - chr5.1:56005369-56005388 None:intergenic 10.0%
!!! TTTTTAAGATTAATAAAGTA+GGG - chr5.1:56005769-56005788 None:intergenic 10.0%
!! GTTAACAGTAATTTAAATAA+TGG - chr5.1:56005468-56005487 None:intergenic 15.0%
!!! AATCGATTTAGAATTTTTTT+TGG - chr5.1:56004979-56004998 None:intergenic 15.0%
!!! AATTTTTTTTGGTAACAAAA+GGG - chr5.1:56004968-56004987 None:intergenic 15.0%
!!! GTTTTTAAGATTAATAAAGT+AGG - chr5.1:56005770-56005789 None:intergenic 15.0%
!!! TTATTTTTTGTCTATAATTG+TGG - chr5.1:56005338-56005357 None:intergenic 15.0%
!! GTATCATATATAATGATTGA+AGG - chr5.1:56004052-56004071 None:intergenic 20.0%
!! TATTTAATGTTCACATCATA+CGG - chr5.1:56005175-56005194 None:intergenic 20.0%
!! TGTTAGTATGTTAATTGTTA+TGG - chr5.1:56005243-56005262 None:intergenic 20.0%
!!! ATGTTAATTTGCTTCTAAAT+CGG - chr5.1:56004353-56004372 None:intergenic 20.0%
!!! CATTAAATAGAAATGCATTT+TGG + chr5.1:56005186-56005205 MS.gene35902:intron 20.0%
!!! GAATTTTTTTTGGTAACAAA+AGG - chr5.1:56004969-56004988 None:intergenic 20.0%
!!! TCCAATAAATTTTGAAGATT+GGG + chr5.1:56006128-56006147 MS.gene35902:CDS 20.0%
!!! TTCCAATAAATTTTGAAGAT+TGG + chr5.1:56006127-56006146 MS.gene35902:CDS 20.0%
!!! TTGTTAATTTGCTTCTAAAT+CGG - chr5.1:56005015-56005034 None:intergenic 20.0%
! ACCCAATCTTCAAAATTTAT+TGG - chr5.1:56006132-56006151 None:intergenic 25.0%
! ATATGATACCATGTTGTATT+GGG + chr5.1:56004063-56004082 MS.gene35902:CDS 25.0%
! ATTTAACATCGAATATGTAG+CGG + chr5.1:56004284-56004303 MS.gene35902:intron 25.0%
! CAAATATGGATATTTAGTCA+TGG + chr5.1:56004706-56004725 MS.gene35902:CDS 25.0%
! CGGATAATGTATGATAAATA+TGG - chr5.1:56005155-56005174 None:intergenic 25.0%
! TATATGATACCATGTTGTAT+TGG + chr5.1:56004062-56004081 MS.gene35902:CDS 25.0%
! TCATATATAATGATTGAAGG+AGG - chr5.1:56004049-56004068 None:intergenic 25.0%
! TTGAATGTTCATCACAAATA+TGG + chr5.1:56004692-56004711 MS.gene35902:CDS 25.0%
! TTTATTGGAAAAGTCCAAAA+AGG - chr5.1:56006117-56006136 None:intergenic 25.0%
!! AAATAGAAATGCATTTTGGA+GGG + chr5.1:56005190-56005209 MS.gene35902:intron 25.0%
!! TAAATAGAAATGCATTTTGG+AGG + chr5.1:56005189-56005208 MS.gene35902:intron 25.0%
!!! ATAAATTTTGAAGATTGGGT+TGG + chr5.1:56006132-56006151 MS.gene35902:CDS 25.0%
!!! ATATGTTCATTGCTATTTGT+TGG - chr5.1:56004228-56004247 None:intergenic 25.0%
!!! TAAATTTTGAAGATTGGGTT+GGG + chr5.1:56006133-56006152 MS.gene35902:CDS 25.0%
!!! TTAATAAAGTAGGGTATTGT+AGG - chr5.1:56005760-56005779 None:intergenic 25.0%
AACAAGGATGTTATTGTTCT+TGG - chr5.1:56003861-56003880 None:intergenic 30.0%
ACAAGGTTGAAAGAAATTTG+TGG + chr5.1:56005970-56005989 MS.gene35902:CDS 30.0%
ACCAATAGTGTAAATTGGTA+AGG - chr5.1:56005737-56005756 None:intergenic 30.0%
ATAAACCTAAAATCTCAGCA+TGG - chr5.1:56004580-56004599 None:intergenic 30.0%
ATGTAAAGAACAGAACCAAT+GGG - chr5.1:56005844-56005863 None:intergenic 30.0%
CAAGGTTGAAAGAAATTTGT+GGG + chr5.1:56005971-56005990 MS.gene35902:CDS 30.0%
CCAATAGTGTAAATTGGTAA+GGG - chr5.1:56005736-56005755 None:intergenic 30.0%
TATGTAAAGAACAGAACCAA+TGG - chr5.1:56005845-56005864 None:intergenic 30.0%
! AGAGCAACGTTAGATTTTTA+TGG + chr5.1:56005929-56005948 MS.gene35902:CDS 30.0%
! CGTTCACTATTAAGATGTTT+TGG + chr5.1:56005417-56005436 MS.gene35902:intron 30.0%
! GAGCAACGTTAGATTTTTAT+GGG + chr5.1:56005930-56005949 MS.gene35902:CDS 30.0%
! GATGAACATTCAAATCCTTT+TGG - chr5.1:56004685-56004704 None:intergenic 30.0%
!! ATGTAGCTATTTGTTGTGTT+TGG - chr5.1:56005802-56005821 None:intergenic 30.0%
!! CTATTTGTTGTGTTTGGTTT+AGG - chr5.1:56005796-56005815 None:intergenic 30.0%
!!! AGCTGATTTTCTAGCTAAAA+AGG + chr5.1:56004799-56004818 MS.gene35902:CDS 30.0%
!!! ATTCTTCTATTGGTGGATTT+TGG + chr5.1:56006043-56006062 MS.gene35902:CDS 30.0%
!!! GAGATTTTAGGTTTATACCA+TGG + chr5.1:56004584-56004603 MS.gene35902:CDS 30.0%
!!! GCTGATTTTCTAGCTAAAAA+GGG + chr5.1:56004800-56004819 MS.gene35902:CDS 30.0%
!!! GTTTCGATTTTAAGGTATCA+AGG - chr5.1:56005711-56005730 None:intergenic 30.0%
AAAGAAATTTGTGGGCACAT+GGG + chr5.1:56005979-56005998 MS.gene35902:CDS 35.0%
AAAGATGGAAGAACCCTTTA+AGG + chr5.1:56004000-56004019 MS.gene35902:CDS 35.0%
AATGTGACAACACTCTCAAT+TGG - chr5.1:56006026-56006045 None:intergenic 35.0%
ACCTAAAAAAGACCCATACT+AGG - chr5.1:56004924-56004943 None:intergenic 35.0%
AGAAATAACACCTTCCTTTG+TGG - chr5.1:56006088-56006107 None:intergenic 35.0%
AGAGCTACTGAATCTATACT+AGG - chr5.1:56004437-56004456 None:intergenic 35.0%
AGAGTAGAGGAAGATGTTAA+GGG + chr5.1:56006159-56006178 MS.gene35902:CDS 35.0%
AGGTTAAGTAGCTCCTTAAA+GGG - chr5.1:56004016-56004035 None:intergenic 35.0%
CAACAAATAGCTACATTGAG+TGG + chr5.1:56005806-56005825 MS.gene35902:intron 35.0%
CACTGACAACAAATGTAACA+AGG - chr5.1:56003877-56003896 None:intergenic 35.0%
CCCTTACCAATTTACACTAT+TGG + chr5.1:56005733-56005752 MS.gene35902:intron 35.0%
CCTAAAAAAGACCCATACTA+GGG - chr5.1:56004923-56004942 None:intergenic 35.0%
GTAGGACCAATAGTGTAAAT+TGG - chr5.1:56005742-56005761 None:intergenic 35.0%
GTATTCCTTGATTCCAACTT+GGG + chr5.1:56004473-56004492 MS.gene35902:intron 35.0%
GTGTTGTCACATTCTTCTAT+TGG + chr5.1:56006033-56006052 MS.gene35902:CDS 35.0%
TACAGGTTGTTGTACAATCA+AGG - chr5.1:56004393-56004412 None:intergenic 35.0%
TAGGTTAAGTAGCTCCTTAA+AGG - chr5.1:56004017-56004036 None:intergenic 35.0%
TAGTGATGCAATGCAGAAAA+TGG + chr5.1:56005566-56005585 MS.gene35902:intron 35.0%
TCAGTAGCTCTTAATGTTGA+TGG + chr5.1:56004446-56004465 MS.gene35902:intron 35.0%
TCTGTTCTTTACATAGCACA+AGG + chr5.1:56005850-56005869 MS.gene35902:CDS 35.0%
TGGAAATCGAAGGAATATTC+CGG + chr5.1:56004096-56004115 MS.gene35902:CDS 35.0%
TGTATTCCTTGATTCCAACT+TGG + chr5.1:56004472-56004491 MS.gene35902:intron 35.0%
TGTTATTGTTCTTGGAGACA+AGG - chr5.1:56003853-56003872 None:intergenic 35.0%
TTACGACATACTTTGCATGA+GGG + chr5.1:56004767-56004786 MS.gene35902:CDS 35.0%
TTGTCACATTCTTCTATTGG+TGG + chr5.1:56006036-56006055 MS.gene35902:CDS 35.0%
TTTACGACATACTTTGCATG+AGG + chr5.1:56004766-56004785 MS.gene35902:CDS 35.0%
! CATTCAAATCCTTTTGGATG+AGG - chr5.1:56004679-56004698 None:intergenic 35.0%
! CATTTTGTTCCAAAAGATGG+TGG - chr5.1:56004171-56004190 None:intergenic 35.0%
! CCTTTTTGCATGGTTTCTTT+GGG + chr5.1:56004531-56004550 MS.gene35902:CDS 35.0%
! CGTCTTTGAAAGGATTTCAA+TGG + chr5.1:56005629-56005648 MS.gene35902:intron 35.0%
! GACCATTTTGTTCCAAAAGA+TGG - chr5.1:56004174-56004193 None:intergenic 35.0%
! GGATTTTGGATTTAAGCATG+TGG + chr5.1:56004622-56004641 MS.gene35902:CDS 35.0%
! TAAGGGCAGTTTCGATTTTA+AGG - chr5.1:56005719-56005738 None:intergenic 35.0%
! TCCTTTTTGCATGGTTTCTT+TGG + chr5.1:56004530-56004549 MS.gene35902:CDS 35.0%
! TTGAAGTTGTGTTGGGATTT+TGG + chr5.1:56004608-56004627 MS.gene35902:CDS 35.0%
!! AAAGGAAGGTGTTATTTCTG+GGG + chr5.1:56006089-56006108 MS.gene35902:CDS 35.0%
!! ACAAAGGAAGGTGTTATTTC+TGG + chr5.1:56006087-56006106 MS.gene35902:CDS 35.0%
!! CAAAGGAAGGTGTTATTTCT+GGG + chr5.1:56006088-56006107 MS.gene35902:CDS 35.0%
!! TGTTACATTTGTTGTCAGTG+AGG + chr5.1:56003877-56003896 MS.gene35902:CDS 35.0%
!!! CACCATCTTTTGGAACAAAA+TGG + chr5.1:56004169-56004188 MS.gene35902:CDS 35.0%
!!! TTATTTCTGGGGTACCTTTT+TGG + chr5.1:56006100-56006119 MS.gene35902:CDS 35.0%
AACACCTTCTTCGTAGAGAT+TGG + chr5.1:56004735-56004754 MS.gene35902:CDS 40.0%
AACCTAAAATCTCAGCATGG+AGG - chr5.1:56004577-56004596 None:intergenic 40.0%
AAGAGGATAGAGGACATATC+AGG - chr5.1:56004869-56004888 None:intergenic 40.0%
ACACCTTCTTCGTAGAGATT+GGG + chr5.1:56004736-56004755 MS.gene35902:CDS 40.0%
AGCTTGCATAGGTTCATCAT+GGG - chr5.1:56003830-56003849 None:intergenic 40.0%
ATCCTCTTAGCAGATGTCAT+GGG + chr5.1:56004881-56004900 MS.gene35902:CDS 40.0%
CCCAAAGAAACCATGCAAAA+AGG - chr5.1:56004534-56004553 None:intergenic 40.0%
GAAAGAAATTTGTGGGCACA+TGG + chr5.1:56005978-56005997 MS.gene35902:CDS 40.0%
GAGAGTAGAGGAAGATGTTA+AGG + chr5.1:56006158-56006177 MS.gene35902:CDS 40.0%
GTTTACCTGAATTTCGCACA+GGG - chr5.1:56004201-56004220 None:intergenic 40.0%
TATCCTCTTAGCAGATGTCA+TGG + chr5.1:56004880-56004899 MS.gene35902:CDS 40.0%
TCGTTCCTTCAGAACTCATT+GGG + chr5.1:56003966-56003985 MS.gene35902:CDS 40.0%
TGTTGTTGACCTCATCCAAA+AGG + chr5.1:56004667-56004686 MS.gene35902:CDS 40.0%
TGTTTACCTGAATTTCGCAC+AGG - chr5.1:56004202-56004221 None:intergenic 40.0%
TTGAAGGAGGATTGTCAAGT+AGG - chr5.1:56004036-56004055 None:intergenic 40.0%
! ACCATGGTTTGAAGTTGTGT+TGG + chr5.1:56004600-56004619 MS.gene35902:CDS 40.0%
! AGATTTTTATGGGTAGCTCG+TGG + chr5.1:56005940-56005959 MS.gene35902:CDS 40.0%
! AGTTTGTTCGACCCTAGTAT+GGG + chr5.1:56004909-56004928 MS.gene35902:intron 40.0%
! ATCCTCCATGCTGAGATTTT+AGG + chr5.1:56004572-56004591 MS.gene35902:CDS 40.0%
! CATACAGGTTCCTTTTTGCA+TGG + chr5.1:56004521-56004540 MS.gene35902:intron 40.0%
! CCATGGTTTGAAGTTGTGTT+GGG + chr5.1:56004601-56004620 MS.gene35902:CDS 40.0%
! TCTCTTACACCACCATCTTT+TGG + chr5.1:56004159-56004178 MS.gene35902:CDS 40.0%
!! AGAAATGCATTTTGGAGGGT+TGG + chr5.1:56005194-56005213 MS.gene35902:intron 40.0%
!! CATTTGTTGTCAGTGAGGAA+TGG + chr5.1:56003882-56003901 MS.gene35902:CDS 40.0%
!! GAAATGCATTTTGGAGGGTT+GGG + chr5.1:56005195-56005214 MS.gene35902:intron 40.0%
!! GGTCTTATTCGTGATCATAC+AGG + chr5.1:56004506-56004525 MS.gene35902:intron 40.0%
!!! ACATGGGATTGGTTTTGGAA+TGG + chr5.1:56005995-56006014 MS.gene35902:CDS 40.0%
!!! CCCTAGTATGGGTCTTTTTT+AGG + chr5.1:56004920-56004939 MS.gene35902:intron 40.0%
AACCTGTACGTATTGTCAGC+TGG + chr5.1:56004405-56004424 MS.gene35902:intron 45.0%
AATTTGTGGGCACATGGGAT+TGG + chr5.1:56005984-56006003 MS.gene35902:CDS 45.0%
AGGATAGAGGACATATCAGG+AGG - chr5.1:56004866-56004885 None:intergenic 45.0%
AGTGTGTGGTTGAAGGAAGT+TGG - chr5.1:56003773-56003792 None:intergenic 45.0%
ATCCTTTCAAAGACGCGTTG+AGG - chr5.1:56005624-56005643 None:intergenic 45.0%
ATTGTCCAAAACGACGCTAC+CGG - chr5.1:56004118-56004137 None:intergenic 45.0%
CCCAACACAACTTCAAACCA+TGG - chr5.1:56004604-56004623 None:intergenic 45.0%
CTGTGGTTGGAATTCCACAA+AGG + chr5.1:56006071-56006090 MS.gene35902:CDS 45.0%
CTGTTGTCGTTGGAAATCGA+AGG + chr5.1:56004086-56004105 MS.gene35902:CDS 45.0%
GACAACAGCCCAATACAACA+TGG - chr5.1:56004074-56004093 None:intergenic 45.0%
GACATCTGCTAAGAGGATAG+AGG - chr5.1:56004879-56004898 None:intergenic 45.0%
GAGCTTGCATAGGTTCATCA+TGG - chr5.1:56003831-56003850 None:intergenic 45.0%
GATAGAGGACATATCAGGAG+GGG - chr5.1:56004864-56004883 None:intergenic 45.0%
GCTTGCATAGGTTCATCATG+GGG - chr5.1:56003829-56003848 None:intergenic 45.0%
GGATAGAGGACATATCAGGA+GGG - chr5.1:56004865-56004884 None:intergenic 45.0%
GGTTGGAATTCCACAAAGGA+AGG + chr5.1:56006075-56006094 MS.gene35902:CDS 45.0%
GTCGTTCCTTCAGAACTCAT+TGG + chr5.1:56003965-56003984 MS.gene35902:CDS 45.0%
TGGCTTGATTCACAACCCAT+TGG + chr5.1:56005826-56005845 MS.gene35902:CDS 45.0%
TTCCTCAACGCGTCTTTGAA+AGG + chr5.1:56005619-56005638 MS.gene35902:intron 45.0%
TTCCTTGATTCCAACTTGGG+AGG + chr5.1:56004476-56004495 MS.gene35902:intron 45.0%
TTGTATTGGGCTGTTGTCGT+TGG + chr5.1:56004076-56004095 MS.gene35902:CDS 45.0%
! AACCTCCCAAGTTGGAATCA+AGG - chr5.1:56004481-56004500 None:intergenic 45.0%
! AAGCTGATGTTGTCGGGTTT+TGG - chr5.1:56003929-56003948 None:intergenic 45.0%
! ATATTCCGGTAGCGTCGTTT+TGG + chr5.1:56004110-56004129 MS.gene35902:CDS 45.0%
! GAGTTTGTTCGACCCTAGTA+TGG + chr5.1:56004908-56004927 MS.gene35902:intron 45.0%
! GATTCCAACTTGGGAGGTTT+TGG + chr5.1:56004482-56004501 MS.gene35902:intron 45.0%
!! AGTTCTGAAGGAACGACGTT+GGG - chr5.1:56003962-56003981 None:intergenic 45.0%
!! GATTTTGGTCACACTGTGGT+TGG + chr5.1:56006058-56006077 MS.gene35902:CDS 45.0%
!! GCTAAAAAGGGTGCTCTTAG+TGG + chr5.1:56004812-56004831 MS.gene35902:CDS 45.0%
!! TTTTGGAGGGTTGGGTAGTA+AGG + chr5.1:56005203-56005222 MS.gene35902:intron 45.0%
!!! GATGTTGTCGGGTTTTGGTT+CGG - chr5.1:56003924-56003943 None:intergenic 45.0%
!! TTCTATAATTTATTTATTTA+TGG + chr5.1:56004257-56004276 MS.gene35902:intron 5.0%
!!! TATTGATATTATTTTAAATT+GGG + chr5.1:56005373-56005392 MS.gene35902:intron 5.0%
!!! TTATTGATATTATTTTAAAT+TGG + chr5.1:56005372-56005391 MS.gene35902:intron 5.0%
AGACGCGTTGAGGAAATTGC+AGG - chr5.1:56005614-56005633 None:intergenic 50.0%
ATCTCAGCATGGAGGATGCA+AGG - chr5.1:56004569-56004588 None:intergenic 50.0%
CACCCATGACATCTGCTAAG+AGG - chr5.1:56004886-56004905 None:intergenic 50.0%
CACTACCCTGTGCGAAATTC+AGG + chr5.1:56004193-56004212 MS.gene35902:CDS 50.0%
CATGGCTAGTGTGTGGTTGA+AGG - chr5.1:56003780-56003799 None:intergenic 50.0%
CCACCCAATCTCTACGAAGA+AGG - chr5.1:56004742-56004761 None:intergenic 50.0%
CCTTCTTCGTAGAGATTGGG+TGG + chr5.1:56004739-56004758 MS.gene35902:CDS 50.0%
CGAACGGAAGCTGATGTTGT+CGG - chr5.1:56003936-56003955 None:intergenic 50.0%
GAACGGAAGCTGATGTTGTC+GGG - chr5.1:56003935-56003954 None:intergenic 50.0%
GTGTGGTTGAAGGAAGTTGG+TGG - chr5.1:56003770-56003789 None:intergenic 50.0%
TAGCTCGTGGAGAAGCTACA+AGG + chr5.1:56005953-56005972 MS.gene35902:CDS 50.0%
TGCCAGCTGACAATACGTAC+AGG - chr5.1:56004410-56004429 None:intergenic 50.0%
TGGAGACAAGGAGCTTGCAT+AGG - chr5.1:56003841-56003860 None:intergenic 50.0%
TGGGATCGCGATGACAAAGA+TGG + chr5.1:56003985-56004004 MS.gene35902:CDS 50.0%
! GCGATCCCAATGAGTTCTGA+AGG - chr5.1:56003974-56003993 None:intergenic 50.0%
!! GAGTTCTGAAGGAACGACGT+TGG - chr5.1:56003963-56003982 None:intergenic 50.0%
!! GGTGGATTTTGGTCACACTG+TGG + chr5.1:56006054-56006073 MS.gene35902:CDS 50.0%
!! GGTTCATCATGGGGTTGATG+TGG - chr5.1:56003820-56003839 None:intergenic 50.0%
!! GTTCTGAAGGAACGACGTTG+GGG - chr5.1:56003961-56003980 None:intergenic 50.0%
!! TCCAACTTGGGAGGTTTTGG+CGG + chr5.1:56004485-56004504 MS.gene35902:intron 50.0%
!! TTGGGTTGGGTTGAGAGTAG+AGG + chr5.1:56006146-56006165 MS.gene35902:CDS 50.0%
!!! TGGGCACATGGGATTGGTTT+TGG + chr5.1:56005990-56006009 MS.gene35902:CDS 50.0%
ACCGCCAAAACCTCCCAAGT+TGG - chr5.1:56004489-56004508 None:intergenic 55.0%
ATGTGGCCTCTTGCAGGGTA+AGG - chr5.1:56003803-56003822 None:intergenic 55.0%
GAACGACGTTGGGGATCGAA+CGG - chr5.1:56003952-56003971 None:intergenic 55.0%
GGTAAGGCATGGCTAGTGTG+TGG - chr5.1:56003787-56003806 None:intergenic 55.0%
! GGTTGATGTGGCCTCTTGCA+GGG - chr5.1:56003808-56003827 None:intergenic 55.0%
!!! GTTGTCGGGTTTTGGTTCGG+AGG - chr5.1:56003921-56003940 None:intergenic 55.0%
GCCATGCCTTACCCTGCAAG+AGG + chr5.1:56003794-56003813 MS.gene35902:CDS 60.0%
GCCTCTTGCAGGGTAAGGCA+TGG - chr5.1:56003798-56003817 None:intergenic 60.0%
!! GGGTTGATGTGGCCTCTTGC+AGG - chr5.1:56003809-56003828 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 56003758 56006200 56003758 ID=MS.gene35902
chr5.1 mRNA 56003758 56006200 56003758 ID=MS.gene35902.t1;Parent=MS.gene35902
chr5.1 exon 56003758 56004214 56003758 ID=MS.gene35902.t1.exon1;Parent=MS.gene35902.t1
chr5.1 CDS 56003758 56004214 56003758 ID=cds.MS.gene35902.t1;Parent=MS.gene35902.t1
chr5.1 exon 56004528 56004924 56004528 ID=MS.gene35902.t1.exon2;Parent=MS.gene35902.t1
chr5.1 CDS 56004528 56004924 56004528 ID=cds.MS.gene35902.t1;Parent=MS.gene35902.t1
chr5.1 exon 56005816 56006200 56005816 ID=MS.gene35902.t1.exon3;Parent=MS.gene35902.t1
chr5.1 CDS 56005816 56006200 56005816 ID=cds.MS.gene35902.t1;Parent=MS.gene35902.t1
Gene Sequence

>MS.gene35902

ATGGAATCACCACCAACTTCCTTCAACCACACACTAGCCATGCCTTACCCTGCAAGAGGCCACATCAACCCCATGATGAACCTATGCAAGCTCCTTGTCTCCAAGAACAATAACATCCTTGTTACATTTGTTGTCAGTGAGGAATGGTTAAGCTTCATCTCCTCCGAACCAAAACCCGACAACATCAGCTTCCGTTCGATCCCCAACGTCGTTCCTTCAGAACTCATTGGGATCGCGATGACAAAGATGGAAGAACCCTTTAAGGAGCTACTTAACCTACTTGACAATCCTCCTTCAATCATTATATATGATACCATGTTGTATTGGGCTGTTGTCGTTGGAAATCGAAGGAATATTCCGGTAGCGTCGTTTTGGACAATGTCTGCTTCGTTTTTCTCTGTTCTCTTACACCACCATCTTTTGGAACAAAATGGTCACTACCCTGTGCGAAATTCAGGTAAACAAAACCAACAAATAGCAATGAACATATTTCAAGTTCTTCTATAATTTATTTATTTATGGAGCAATTTAACATCGAATATGTAGCGGTTGATTTATAGACTGATTTCTAAATCAATTGTTGAATATACAACCGATTTAGAAGCAAATTAACATTCTAAATCGATTGTACTCCTTGATTGTACAACAACCTGTACGTATTGTCAGCTGGCAACGACCTAGTATAGATTCAGTAGCTCTTAATGTTGATGGCAGTGTATTCCTTGATTCCAACTTGGGAGGTTTTGGCGGTCTTATTCGTGATCATACAGGTTCCTTTTTGCATGGTTTCTTTGGGAAAATTAGTAGACCTTGCATCCTCCATGCTGAGATTTTAGGTTTATACCATGGTTTGAAGTTGTGTTGGGATTTTGGATTTAAGCATGTGGTATGTCTCTCTGATTCAACTATTGTTGTTGACCTCATCCAAAAGGATTTGAATGTTCATCACAAATATGGATATTTAGTCATGGCTATTAAACACCTTCTTCGTAGAGATTGGGTGGTTAGTTTACGACATACTTTGCATGAGGGTAACACTGCAGCTGATTTTCTAGCTAAAAAGGGTGCTCTTAGTGGTAGTAGCTTTGTTATTTTGAATGAAGCCCCTCCTGATATGTCCTCTATCCTCTTAGCAGATGTCATGGGTGTTGAGTTTGTTCGACCCTAGTATGGGTCTTTTTTAGGTTTTTTTTTTCTTTCTTTTCTTCCCTTTTGTTACCAAAAAAAATTCTAAATCGATTGTTGAATGTACAACCGATTTAGAAGCAAATTAACAAAAAGTTTTTAAACTGCTAGTTGCTAATGTAAACAACTAGTTTTTCATTTCTAGTATCTAGATTATATAGCAAAATTTGTATAGAAAGCATTATTAAAAGCATATAAATACATCATAACCATATTTATCATACATTATCCGTATGATGTGAACATTAAATAGAAATGCATTTTGGAGGGTTGGGTAGTAAGGAGAAAAAAATACTACCATAACAATTAACATACTAACATTTGTTTTTCAAATAATGATTTTTTATACTTTATTTTACAATTTGCATATTAGCAAAATGTTGAAATCATGACCACAATTATAGACAAAAAATAAAATAATATCCAAACTTATTGATATTATTTTAAATTGGGTGATATTAATTACGTTCTCTGCGTTCACTATTAAGATGTTTTGGACTGTCAGTGTCGATCAATCACAAACCATTATTTAAATTACTGTTAACTTTGATATGTCGAAAGTTTTTTTTTTTTTTAATAATGTAATAGATATGACTGATTGATATGAATTAAATCATGAGACTTAGTGATGCAATGCAGAAAATGGTGATGAACATATAAGTTATATTCCTGCAATTTCCTCAACGCGTCTTTGAAAGGATTTCAATGGATTCACAAAGCACAATATCTTCTATTCACTTCAATTTATGAGCTTGAATCTCAAGTCCTTGATACCTTAAAATCGAAACTGCCCTTACCAATTTACACTATTGGTCCTACAATACCCTACTTTATTAATCTTAAAAACAATCCTAAACCAAACACAACAAATAGCTACATTGAGTGGCTTGATTCACAACCCATTGGTTCTGTTCTTTACATAGCACAAGGTAGTTTTTTCTCAGCTTCAAATGAACAAATTGATGAGATTGCAAATGCTTTGTGTGAGAGCAACGTTAGATTTTTATGGGTAGCTCGTGGAGAAGCTACAAGGTTGAAAGAAATTTGTGGGCACATGGGATTGGTTTTGGAATGGTGTGACCAATTGAGAGTGTTGTCACATTCTTCTATTGGTGGATTTTGGTCACACTGTGGTTGGAATTCCACAAAGGAAGGTGTTATTTCTGGGGTACCTTTTTGGACTTTTCCAATAAATTTTGAAGATTGGGTTGGGTTGAGAGTAGAGGAAGATGTTAAGGGAGATATTTTGAAGATTTGA
Protein sequence

>MS.gene35902.t1

MESPPTSFNHTLAMPYPARGHINPMMNLCKLLVSKNNNILVTFVVSEEWLSFISSEPKPDNISFRSIPNVVPSELIGIAMTKMEEPFKELLNLLDNPPSIIIYDTMLYWAVVVGNRRNIPVASFWTMSASFFSVLLHHHLLEQNGHYPVRNSGSFLHGFFGKISRPCILHAEILGLYHGLKLCWDFGFKHVVCLSDSTIVVDLIQKDLNVHHKYGYLVMAIKHLLRRDWVVSLRHTLHEGNTAADFLAKKGALSGSSFVILNEAPPDMSSILLADVMGVEFVRPYYIEWLDSQPIGSVLYIAQGSFFSASNEQIDEIANALCESNVRFLWVARGEATRLKEICGHMGLVLEWCDQLRVLSHSSIGGFWSHCGWNSTKEGVISGVPFWTFPINFEDWVGLRVEEDVKGDILKI