Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36334.t1 | XP_003597715.1 | 94.8 | 310 | 15 | 1 | 1 | 310 | 18 | 326 | 7.70E-165 | 589.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36334.t1 | Q38826 | 51.5 | 307 | 113 | 6 | 6 | 309 | 45 | 318 | 1.9e-74 | 280.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36334.t1 | G7IUP2 | 94.8 | 310 | 15 | 1 | 1 | 310 | 18 | 326 | 5.6e-165 | 589.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene36334.t1 | TR | AUX/IAA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene36334 | 0.816634 | 5.00E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene36334 | 0.860762 | 1.65E-63 | -1.69E-46 |
| MS.gene049404 | MS.gene36334 | 0.800851 | 1.19E-48 | -1.69E-46 |
| MS.gene049418 | MS.gene36334 | 0.821937 | 3.10E-53 | -1.69E-46 |
| MS.gene049711 | MS.gene36334 | 0.875817 | 2.28E-68 | -1.69E-46 |
| MS.gene049770 | MS.gene36334 | 0.801185 | 1.01E-48 | -1.69E-46 |
| MS.gene049807 | MS.gene36334 | 0.826691 | 2.36E-54 | -1.69E-46 |
| MS.gene049824 | MS.gene36334 | 0.820049 | 8.42E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene36334 | 0.82908 | 6.29E-55 | -1.69E-46 |
| MS.gene05045 | MS.gene36334 | 0.805414 | 1.35E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene36334 | 0.807653 | 4.55E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene36334 | 0.801552 | 8.53E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene36334 | 0.807197 | 5.69E-50 | -1.69E-46 |
| MS.gene050901 | MS.gene36334 | 0.832081 | 1.16E-55 | -1.69E-46 |
| MS.gene051018 | MS.gene36334 | 0.820257 | 7.55E-53 | -1.69E-46 |
| MS.gene051201 | MS.gene36334 | 0.801327 | 9.49E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene36334 | 0.806708 | 7.21E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene36334 | 0.863795 | 1.93E-64 | -1.69E-46 |
| MS.gene05157 | MS.gene36334 | 0.815663 | 8.24E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene36334 | 0.816963 | 4.22E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene36334 | 0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene051700 | MS.gene36334 | 0.807599 | 4.67E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene36334 | 0.86515 | 7.28E-65 | -1.69E-46 |
| MS.gene051720 | MS.gene36334 | 0.893394 | 6.55E-75 | -1.69E-46 |
| MS.gene051744 | MS.gene36334 | 0.841405 | 4.85E-58 | -1.69E-46 |
| MS.gene052000 | MS.gene36334 | 0.809089 | 2.25E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene36334 | 0.805503 | 1.29E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene36334 | -0.804273 | 2.34E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene36334 | 0.833306 | 5.75E-56 | -1.69E-46 |
| MS.gene052582 | MS.gene36334 | 0.822412 | 2.40E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene36334 | 0.823936 | 1.06E-53 | -1.69E-46 |
| MS.gene052628 | MS.gene36334 | 0.807874 | 4.08E-50 | -1.69E-46 |
| MS.gene052732 | MS.gene36334 | 0.810027 | 1.41E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene36334 | 0.846276 | 2.40E-59 | -1.69E-46 |
| MS.gene053144 | MS.gene36334 | 0.861654 | 8.81E-64 | -1.69E-46 |
| MS.gene053226 | MS.gene36334 | 0.864134 | 1.51E-64 | -1.69E-46 |
| MS.gene053536 | MS.gene36334 | 0.818724 | 1.69E-52 | -1.69E-46 |
| MS.gene053538 | MS.gene36334 | 0.822998 | 1.76E-53 | -1.69E-46 |
| MS.gene053581 | MS.gene36334 | 0.822742 | 2.01E-53 | -1.69E-46 |
| MS.gene053599 | MS.gene36334 | 0.81033 | 1.22E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene36334 | 0.849197 | 3.77E-60 | -1.69E-46 |
| MS.gene054142 | MS.gene36334 | 0.82896 | 6.72E-55 | -1.69E-46 |
| MS.gene054178 | MS.gene36334 | 0.823687 | 1.21E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene36334 | 0.870048 | 1.96E-66 | -1.69E-46 |
| MS.gene05458 | MS.gene36334 | 0.826802 | 2.22E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene36334 | 0.836548 | 8.77E-57 | -1.69E-46 |
| MS.gene055083 | MS.gene36334 | 0.818227 | 2.19E-52 | -1.69E-46 |
| MS.gene055144 | MS.gene36334 | 0.864478 | 1.18E-64 | -1.69E-46 |
| MS.gene055465 | MS.gene36334 | 0.84187 | 3.66E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene36334 | 0.836305 | 1.01E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene36334 | 0.832288 | 1.03E-55 | -1.69E-46 |
| MS.gene055513 | MS.gene36334 | 0.806069 | 9.84E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene36334 | 0.8588 | 6.42E-63 | -1.69E-46 |
| MS.gene055580 | MS.gene36334 | -0.837945 | 3.85E-57 | -1.69E-46 |
| MS.gene055694 | MS.gene36334 | 0.813446 | 2.55E-51 | -1.69E-46 |
| MS.gene055890 | MS.gene36334 | 0.809895 | 1.51E-50 | -1.69E-46 |
| MS.gene056005 | MS.gene36334 | 0.836286 | 1.02E-56 | -1.69E-46 |
| MS.gene056043 | MS.gene36334 | -0.809953 | 1.47E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene36334 | 0.850591 | 1.54E-60 | -1.69E-46 |
| MS.gene056308 | MS.gene36334 | 0.870998 | 9.55E-67 | -1.69E-46 |
| MS.gene056366 | MS.gene36334 | 0.813765 | 2.17E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene36334 | 0.829667 | 4.53E-55 | -1.69E-46 |
| MS.gene056595 | MS.gene36334 | 0.807894 | 4.05E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene36334 | 0.824861 | 6.42E-54 | -1.69E-46 |
| MS.gene057082 | MS.gene36334 | 0.82483 | 6.52E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene36334 | 0.821126 | 4.76E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene36334 | 0.802831 | 4.66E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene36334 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene058330 | MS.gene36334 | 0.807588 | 4.70E-50 | -1.69E-46 |
| MS.gene058339 | MS.gene36334 | 0.806962 | 6.38E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene36334 | 0.80531 | 1.42E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene36334 | 0.807711 | 4.42E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene36334 | 0.800827 | 1.20E-48 | -1.69E-46 |
| MS.gene058668 | MS.gene36334 | 0.833352 | 5.60E-56 | -1.69E-46 |
| MS.gene05894 | MS.gene36334 | 0.880825 | 3.99E-70 | -1.69E-46 |
| MS.gene059015 | MS.gene36334 | 0.830942 | 2.21E-55 | -1.69E-46 |
| MS.gene059424 | MS.gene36334 | 0.815347 | 9.68E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene36334 | 0.824343 | 8.50E-54 | -1.69E-46 |
| MS.gene059778 | MS.gene36334 | 0.803195 | 3.91E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene36334 | 0.801434 | 9.02E-49 | -1.69E-46 |
| MS.gene060519 | MS.gene36334 | 0.864426 | 1.23E-64 | -1.69E-46 |
| MS.gene060587 | MS.gene36334 | 0.848782 | 4.92E-60 | -1.69E-46 |
| MS.gene060603 | MS.gene36334 | 0.84195 | 3.48E-58 | -1.69E-46 |
| MS.gene061100 | MS.gene36334 | 0.814366 | 1.60E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36334.t1 | MTR_2g101500 | 94.839 | 310 | 15 | 1 | 1 | 310 | 18 | 326 | 0.0 | 607 |
| MS.gene36334.t1 | MTR_8g103030 | 55.911 | 313 | 85 | 10 | 8 | 310 | 24 | 293 | 3.47e-101 | 299 |
| MS.gene36334.t1 | MTR_5g030710 | 53.292 | 319 | 111 | 8 | 2 | 310 | 45 | 335 | 5.51e-101 | 300 |
| MS.gene36334.t1 | MTR_8g067530 | 52.366 | 317 | 114 | 8 | 2 | 310 | 69 | 356 | 3.26e-99 | 296 |
| MS.gene36334.t1 | MTR_6g488150 | 53.226 | 310 | 78 | 9 | 3 | 310 | 10 | 254 | 9.64e-92 | 273 |
| MS.gene36334.t1 | MTR_5g067350 | 51.572 | 318 | 116 | 10 | 2 | 310 | 59 | 347 | 1.18e-89 | 271 |
| MS.gene36334.t1 | MTR_1g070520 | 64.024 | 164 | 53 | 3 | 151 | 310 | 84 | 245 | 1.28e-65 | 206 |
| MS.gene36334.t1 | MTR_1g080860 | 44.156 | 308 | 100 | 8 | 6 | 309 | 13 | 252 | 1.34e-65 | 206 |
| MS.gene36334.t1 | MTR_7g096090 | 62.733 | 161 | 55 | 3 | 151 | 310 | 94 | 250 | 1.03e-64 | 204 |
| MS.gene36334.t1 | MTR_1g093240 | 62.112 | 161 | 58 | 2 | 151 | 310 | 78 | 236 | 1.54e-63 | 201 |
| MS.gene36334.t1 | MTR_1g080860 | 43.960 | 298 | 95 | 8 | 6 | 299 | 13 | 242 | 1.46e-61 | 196 |
| MS.gene36334.t1 | MTR_1g093240 | 63.087 | 149 | 52 | 2 | 151 | 298 | 78 | 224 | 1.38e-58 | 188 |
| MS.gene36334.t1 | MTR_1g040675 | 49.741 | 193 | 64 | 6 | 112 | 298 | 17 | 182 | 3.92e-51 | 167 |
| MS.gene36334.t1 | MTR_1g070830 | 44.248 | 226 | 100 | 5 | 74 | 298 | 1 | 201 | 2.94e-50 | 166 |
| MS.gene36334.t1 | MTR_1g076270 | 54.362 | 149 | 41 | 5 | 150 | 298 | 57 | 178 | 5.81e-46 | 154 |
| MS.gene36334.t1 | MTR_1g093350 | 54.362 | 149 | 41 | 5 | 150 | 298 | 57 | 178 | 5.81e-46 | 154 |
| MS.gene36334.t1 | MTR_1g093240 | 60.156 | 128 | 48 | 2 | 151 | 277 | 78 | 203 | 9.96e-46 | 154 |
| MS.gene36334.t1 | MTR_6g488150 | 45.690 | 232 | 59 | 9 | 3 | 232 | 10 | 176 | 1.85e-45 | 153 |
| MS.gene36334.t1 | MTR_5g067350 | 44.167 | 240 | 99 | 9 | 2 | 232 | 59 | 272 | 1.02e-43 | 151 |
| MS.gene36334.t1 | MTR_1g040675 | 47.093 | 172 | 58 | 6 | 112 | 277 | 17 | 161 | 2.03e-39 | 136 |
| MS.gene36334.t1 | MTR_1g069495 | 45.213 | 188 | 69 | 7 | 155 | 309 | 81 | 267 | 2.78e-36 | 131 |
| MS.gene36334.t1 | MTR_4g011880 | 49.669 | 151 | 44 | 5 | 154 | 302 | 52 | 172 | 4.04e-32 | 118 |
| MS.gene36334.t1 | MTR_2g100780 | 40.113 | 177 | 86 | 4 | 138 | 294 | 78 | 254 | 1.55e-31 | 119 |
| MS.gene36334.t1 | MTR_2g100780 | 40.113 | 177 | 86 | 4 | 138 | 294 | 78 | 254 | 2.40e-31 | 118 |
| MS.gene36334.t1 | MTR_8g014520 | 41.401 | 157 | 77 | 3 | 153 | 294 | 104 | 260 | 1.89e-29 | 113 |
| MS.gene36334.t1 | MTR_2g102490 | 52.336 | 107 | 39 | 3 | 190 | 293 | 86 | 183 | 1.94e-29 | 111 |
| MS.gene36334.t1 | MTR_8g014520 | 41.401 | 157 | 77 | 3 | 153 | 294 | 104 | 260 | 2.36e-29 | 113 |
| MS.gene36334.t1 | MTR_4g124300 | 34.899 | 149 | 64 | 7 | 150 | 292 | 60 | 181 | 1.47e-17 | 79.3 |
| MS.gene36334.t1 | MTR_3g106850 | 30.323 | 155 | 77 | 6 | 147 | 294 | 79 | 209 | 1.23e-16 | 77.4 |
| MS.gene36334.t1 | MTR_7g110790 | 39.423 | 104 | 49 | 3 | 188 | 291 | 66 | 155 | 2.75e-15 | 72.4 |
| MS.gene36334.t1 | MTR_1g085750 | 39.604 | 101 | 47 | 2 | 191 | 291 | 84 | 170 | 3.70e-15 | 72.8 |
| MS.gene36334.t1 | MTR_1g109510 | 30.137 | 146 | 80 | 4 | 147 | 291 | 44 | 168 | 6.69e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36334.t1 | AT2G22670 | 51.466 | 307 | 113 | 6 | 6 | 309 | 62 | 335 | 1.02e-95 | 286 |
| MS.gene36334.t1 | AT2G22670 | 51.466 | 307 | 113 | 6 | 6 | 309 | 45 | 318 | 1.04e-95 | 286 |
| MS.gene36334.t1 | AT2G22670 | 51.466 | 307 | 113 | 6 | 6 | 309 | 45 | 318 | 1.04e-95 | 286 |
| MS.gene36334.t1 | AT4G29080 | 54.984 | 311 | 89 | 11 | 8 | 310 | 38 | 305 | 1.26e-94 | 283 |
| MS.gene36334.t1 | AT2G22670 | 50.814 | 307 | 113 | 7 | 6 | 309 | 45 | 316 | 1.99e-92 | 277 |
| MS.gene36334.t1 | AT2G22670 | 50.814 | 307 | 113 | 7 | 6 | 309 | 45 | 316 | 1.99e-92 | 277 |
| MS.gene36334.t1 | AT5G65670 | 50.327 | 306 | 117 | 8 | 6 | 307 | 59 | 333 | 1.85e-87 | 265 |
| MS.gene36334.t1 | AT5G65670 | 50.000 | 308 | 117 | 9 | 6 | 307 | 59 | 335 | 1.20e-85 | 261 |
| MS.gene36334.t1 | AT4G14550 | 42.810 | 306 | 94 | 6 | 8 | 310 | 1 | 228 | 2.30e-68 | 213 |
| MS.gene36334.t1 | AT3G04730 | 50.877 | 228 | 90 | 4 | 99 | 310 | 15 | 236 | 3.11e-66 | 207 |
| MS.gene36334.t1 | AT4G14550 | 42.517 | 294 | 88 | 6 | 8 | 298 | 1 | 216 | 1.18e-63 | 201 |
| MS.gene36334.t1 | AT3G23050 | 41.176 | 306 | 98 | 7 | 8 | 305 | 6 | 237 | 3.96e-61 | 195 |
| MS.gene36334.t1 | AT1G04250 | 51.232 | 203 | 86 | 5 | 111 | 309 | 35 | 228 | 1.21e-58 | 188 |
| MS.gene36334.t1 | AT4G14550 | 39.560 | 273 | 84 | 6 | 8 | 277 | 1 | 195 | 3.41e-50 | 165 |
| MS.gene36334.t1 | AT1G04240 | 56.000 | 150 | 45 | 4 | 150 | 299 | 58 | 186 | 2.71e-48 | 160 |
| MS.gene36334.t1 | AT5G43700 | 51.136 | 176 | 60 | 6 | 124 | 299 | 33 | 182 | 9.11e-48 | 159 |
| MS.gene36334.t1 | AT1G04240 | 56.000 | 150 | 45 | 4 | 149 | 298 | 157 | 285 | 1.82e-47 | 161 |
| MS.gene36334.t1 | AT3G23030 | 49.162 | 179 | 56 | 5 | 123 | 298 | 24 | 170 | 6.82e-45 | 150 |
| MS.gene36334.t1 | AT3G23030 | 49.162 | 179 | 56 | 5 | 123 | 298 | 111 | 257 | 4.56e-44 | 151 |
| MS.gene36334.t1 | AT3G23050 | 37.410 | 278 | 92 | 7 | 8 | 277 | 6 | 209 | 2.28e-43 | 148 |
| MS.gene36334.t1 | AT4G14560 | 54.545 | 154 | 40 | 3 | 142 | 295 | 41 | 164 | 5.39e-41 | 140 |
| MS.gene36334.t1 | AT1G52830 | 44.785 | 163 | 62 | 4 | 136 | 298 | 50 | 184 | 2.82e-40 | 139 |
| MS.gene36334.t1 | AT3G15540 | 49.390 | 164 | 56 | 6 | 143 | 303 | 56 | 195 | 5.18e-39 | 136 |
| MS.gene36334.t1 | AT4G28640 | 44.571 | 175 | 77 | 5 | 141 | 299 | 72 | 242 | 2.55e-36 | 131 |
| MS.gene36334.t1 | AT4G28640 | 44.509 | 173 | 76 | 5 | 141 | 297 | 72 | 240 | 4.49e-36 | 130 |
| MS.gene36334.t1 | AT4G28640 | 44.509 | 173 | 76 | 5 | 141 | 297 | 72 | 240 | 3.30e-35 | 129 |
| MS.gene36334.t1 | AT2G33310 | 42.286 | 175 | 75 | 3 | 147 | 301 | 65 | 233 | 5.18e-35 | 127 |
| MS.gene36334.t1 | AT2G33310 | 42.286 | 175 | 75 | 3 | 147 | 301 | 65 | 233 | 5.18e-35 | 127 |
| MS.gene36334.t1 | AT2G33310 | 39.894 | 188 | 88 | 2 | 133 | 301 | 53 | 234 | 5.37e-35 | 127 |
| MS.gene36334.t1 | AT1G15580 | 46.528 | 144 | 44 | 3 | 151 | 293 | 48 | 159 | 2.17e-34 | 123 |
| MS.gene36334.t1 | AT1G04550 | 40.741 | 189 | 81 | 5 | 144 | 310 | 57 | 236 | 5.03e-34 | 124 |
| MS.gene36334.t1 | AT3G16500 | 37.198 | 207 | 104 | 5 | 110 | 294 | 50 | 252 | 6.63e-32 | 120 |
| MS.gene36334.t1 | AT3G16500 | 37.198 | 207 | 104 | 5 | 110 | 294 | 50 | 252 | 7.80e-32 | 120 |
| MS.gene36334.t1 | AT4G14550 | 35.683 | 227 | 67 | 5 | 8 | 231 | 1 | 151 | 2.23e-29 | 110 |
| MS.gene36334.t1 | AT5G25890 | 41.060 | 151 | 66 | 4 | 155 | 305 | 47 | 174 | 2.42e-29 | 110 |
| MS.gene36334.t1 | AT1G51950 | 38.012 | 171 | 82 | 3 | 144 | 294 | 84 | 250 | 2.55e-28 | 110 |
| MS.gene36334.t1 | AT1G04100 | 38.922 | 167 | 74 | 4 | 158 | 298 | 95 | 259 | 4.06e-28 | 109 |
| MS.gene36334.t1 | AT3G23050 | 32.759 | 232 | 76 | 6 | 8 | 231 | 6 | 165 | 4.40e-24 | 96.7 |
| MS.gene36334.t1 | AT3G17600 | 37.241 | 145 | 63 | 6 | 148 | 291 | 37 | 154 | 4.08e-21 | 88.6 |
| MS.gene36334.t1 | AT3G62100 | 42.574 | 101 | 43 | 2 | 191 | 291 | 83 | 168 | 2.08e-18 | 81.6 |
| MS.gene36334.t1 | AT2G46990 | 41.584 | 101 | 44 | 2 | 191 | 291 | 85 | 170 | 8.17e-18 | 80.1 |
| MS.gene36334.t1 | AT4G32280 | 35.644 | 101 | 45 | 2 | 191 | 291 | 118 | 198 | 1.88e-14 | 71.6 |
| MS.gene36334.t1 | AT4G32280 | 28.571 | 168 | 69 | 4 | 155 | 291 | 93 | 240 | 3.03e-14 | 71.6 |
| MS.gene36334.t1 | AT3G62100 | 41.379 | 87 | 36 | 2 | 191 | 277 | 83 | 154 | 1.34e-13 | 67.8 |
| MS.gene36334.t1 | AT2G46990 | 41.379 | 87 | 36 | 2 | 191 | 277 | 85 | 156 | 1.83e-13 | 67.4 |
| MS.gene36334.t1 | AT1G15050 | 36.190 | 105 | 51 | 1 | 192 | 296 | 62 | 150 | 8.29e-12 | 62.8 |
| MS.gene36334.t1 | AT1G15050 | 36.190 | 105 | 51 | 1 | 192 | 296 | 94 | 182 | 1.63e-11 | 62.8 |
| MS.gene36334.t1 | AT2G01200 | 34.127 | 126 | 63 | 2 | 171 | 296 | 83 | 188 | 2.11e-11 | 62.4 |
| MS.gene36334.t1 | AT2G01200 | 34.127 | 126 | 63 | 2 | 171 | 296 | 83 | 188 | 2.11e-11 | 62.4 |
Find 71 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTCTCCTGGACTTCC+TGG | 0.219552 | 2.2:+2113431 | MS.gene36334:CDS |
| TGCTTGTAGGTGATGTTCCT+TGG | 0.297899 | 2.2:+2113543 | MS.gene36334:CDS |
| GATGCCATTGATGAGTCTTC+TGG | 0.307952 | 2.2:+2112336 | MS.gene36334:CDS |
| GAAAAGAATAAACAGGTTAA+TGG | 0.313899 | 2.2:+2112528 | MS.gene36334:CDS |
| CTGTAATAGGGCACAGGTTG+TGG | 0.328430 | 2.2:+2112925 | MS.gene36334:intron |
| GCTTGTAGGTGATGTTCCTT+GGG | 0.334696 | 2.2:+2113544 | MS.gene36334:CDS |
| CAAGACCTACAACAACTATA+TGG | 0.360524 | 2.2:+2113096 | MS.gene36334:CDS |
| GTTGCTACTGCTGCTGCTGC+TGG | 0.370667 | 2.2:+2112210 | MS.gene36334:CDS |
| ATGAAAGGCTCCGAGGCAAT+TGG | 0.372758 | 2.2:+2113834 | MS.gene36334:CDS |
| AATGTTCTTCAAATCCTTGT+TGG | 0.373464 | 2.2:-2112250 | None:intergenic |
| TCTTTGAGGGATCTTCTTCA+TGG | 0.378941 | 2.2:+2113476 | MS.gene36334:CDS |
| ATCTTCTTCTCTCAACTTCA+AGG | 0.387877 | 2.2:+2112134 | MS.gene36334:CDS |
| ATTGTTCTTTGACAAATTAG+AGG | 0.395241 | 2.2:-2112987 | None:intergenic |
| TCTCTATGTAAAAGTCAGTA+TGG | 0.396729 | 2.2:+2113042 | MS.gene36334:CDS |
| AAGTTCCATATAGTTGTTGT+AGG | 0.402215 | 2.2:-2113101 | None:intergenic |
| TTGATGAGTCTTCTGGGAAA+TGG | 0.428366 | 2.2:+2112343 | MS.gene36334:CDS |
| AGATCAACCTTTCTGAGATA+AGG | 0.437164 | 2.2:-2113073 | None:intergenic |
| TTTCCAACATTCCCTCCTCT+TGG | 0.438896 | 2.2:-2112411 | None:intergenic |
| ATGAAGATAAAGATGGAGAT+TGG | 0.439416 | 2.2:+2113519 | MS.gene36334:CDS |
| CCTGGACTTCCTGGGAAAGA+TGG | 0.446287 | 2.2:+2113440 | MS.gene36334:CDS |
| ATGCCATTGATGAGTCTTCT+GGG | 0.457749 | 2.2:+2112337 | MS.gene36334:CDS |
| TGTACATGAAAAGAATAAAC+AGG | 0.460606 | 2.2:+2112521 | MS.gene36334:CDS |
| TGTAATAGGGCACAGGTTGT+GGG | 0.465911 | 2.2:+2112926 | MS.gene36334:intron |
| GACTAAGTGAGAGCTCTTTG+AGG | 0.466933 | 2.2:+2113462 | MS.gene36334:CDS |
| TCAGGTCAATGCAATTCTCC+TGG | 0.470704 | 2.2:+2113422 | MS.gene36334:intron |
| CAAGAGCCATGGGAAAATCT+AGG | 0.474403 | 2.2:+2114137 | MS.gene36334:CDS |
| CCATCTTTCCCAGGAAGTCC+AGG | 0.476059 | 2.2:-2113440 | None:intergenic |
| AAGAACCTTGTAGCTAGTGT+TGG | 0.483602 | 2.2:+2112294 | MS.gene36334:CDS |
| TGAAAGGCTCCGAGGCAATT+GGG | 0.483983 | 2.2:+2113835 | MS.gene36334:CDS |
| CCGACTCGTGTAGGAGACTA+AGG | 0.487592 | 2.2:+2113808 | MS.gene36334:CDS |
| TTTCGAAACGATCGAATTGG+TGG | 0.491043 | 2.2:-2112953 | None:intergenic |
| ACATAGAGACAGTCAAATCC+TGG | 0.496327 | 2.2:-2113028 | None:intergenic |
| GATGAAGCCGAGGGAAAACC+AGG | 0.503517 | 2.2:+2113010 | MS.gene36334:CDS |
| GTTAGTACCAATGGTAAAGC+AGG | 0.504295 | 2.2:-2113149 | None:intergenic |
| GATGGAGATTGGATGCTTGT+AGG | 0.506785 | 2.2:+2113530 | MS.gene36334:CDS |
| CTATCAGGAGATTCACAACC+AGG | 0.513603 | 2.2:-2112180 | None:intergenic |
| GAGCTCAGACTAGGCTTACC+TGG | 0.513881 | 2.2:+2112162 | MS.gene36334:CDS |
| TGGAGTTTCTCTATGAATGA+TGG | 0.515427 | 2.2:+2112363 | MS.gene36334:CDS |
| GCTAGTGTTGGAGCTAAAAG+AGG | 0.516388 | 2.2:+2112306 | MS.gene36334:CDS |
| TAGCTCCAACACTAGCTACA+AGG | 0.519601 | 2.2:-2112299 | None:intergenic |
| GGCTCCGAGGCAATTGGGCT+AGG | 0.521923 | 2.2:+2113840 | MS.gene36334:CDS |
| ATGTTCACCTGCTTTACCAT+TGG | 0.525163 | 2.2:+2113142 | MS.gene36334:CDS |
| TCTCCAAGAGGAGGGAATGT+TGG | 0.528075 | 2.2:+2112408 | MS.gene36334:CDS |
| TCACTTAGTCCATCTTTCCC+AGG | 0.528669 | 2.2:-2113449 | None:intergenic |
| ACTAAGTGAGAGCTCTTTGA+GGG | 0.537995 | 2.2:+2113463 | MS.gene36334:CDS |
| GCAATTCTCCTGGACTTCCT+GGG | 0.538453 | 2.2:+2113432 | MS.gene36334:CDS |
| CTTACATATGAAGATAAAGA+TGG | 0.540325 | 2.2:+2113512 | MS.gene36334:CDS |
| CATACCTAGCCCAATTGCCT+CGG | 0.543011 | 2.2:-2113844 | None:intergenic |
| GTTTGCAGCTCCAAGAGCCA+TGG | 0.546429 | 2.2:+2114126 | MS.gene36334:intron |
| TATGTAAAAGTCAGTATGGA+TGG | 0.548265 | 2.2:+2113046 | MS.gene36334:CDS |
| AGTCTCTTTCTTTGCCAACA+AGG | 0.555451 | 2.2:+2112236 | MS.gene36334:CDS |
| AAAGAAACATACTTTGCAGC+AGG | 0.558479 | 2.2:-2112573 | None:intergenic |
| TTTGCAGCTCCAAGAGCCAT+GGG | 0.568102 | 2.2:+2114127 | MS.gene36334:intron |
| TCTATGAATGATGGATCTGA+AGG | 0.572939 | 2.2:+2112372 | MS.gene36334:CDS |
| AAGGAAACTGAGCTCAGACT+AGG | 0.575995 | 2.2:+2112153 | MS.gene36334:CDS |
| AAACTTCTGTAATAGGGCAC+AGG | 0.579506 | 2.2:+2112919 | MS.gene36334:intron |
| TGGTGCTCCTTATCTCAGAA+AGG | 0.583817 | 2.2:+2113066 | MS.gene36334:CDS |
| TTTCCCAGAAGACTCATCAA+TGG | 0.587418 | 2.2:-2112340 | None:intergenic |
| CTTTGTTCTCTCCAAGAGGA+GGG | 0.588412 | 2.2:+2112400 | MS.gene36334:CDS |
| GCTTTGTTCTCTCCAAGAGG+AGG | 0.598726 | 2.2:+2112399 | MS.gene36334:CDS |
| AAAGAACAATGATGAAGCCG+AGG | 0.602787 | 2.2:+2113000 | MS.gene36334:CDS |
| GGATGTTCGCCGACTCGTGT+AGG | 0.604960 | 2.2:+2113799 | MS.gene36334:intron |
| CTAGCTACAAGGTTCTTCAA+AGG | 0.626425 | 2.2:-2112288 | None:intergenic |
| ATAGGGCACAGGTTGTGGGA+TGG | 0.638025 | 2.2:+2112930 | MS.gene36334:intron |
| GCTGCTTTGTTCTCTCCAAG+AGG | 0.650123 | 2.2:+2112396 | MS.gene36334:CDS |
| CCTTAGTCTCCTACACGAGT+CGG | 0.654169 | 2.2:-2113808 | None:intergenic |
| AGGAGACTAAGGATCATGAA+AGG | 0.655773 | 2.2:+2113819 | MS.gene36334:CDS |
| CTTGTAGGTGATGTTCCTTG+GGG | 0.665765 | 2.2:+2113545 | MS.gene36334:CDS |
| AAGAACAATGATGAAGCCGA+GGG | 0.680813 | 2.2:+2113001 | MS.gene36334:CDS |
| TTGTAGGTGATGTTCCTTGG+GGG | 0.698490 | 2.2:+2113546 | MS.gene36334:CDS |
| AAGGATCATGAAAGGCTCCG+AGG | 0.730710 | 2.2:+2113827 | MS.gene36334:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAGTTAGATATATTTAT+GGG | + | chr2.2:2112836-2112855 | MS.gene36334:intron | 10.0% |
| !! | TTAAAAGTTAGATATATTTA+TGG | + | chr2.2:2112835-2112854 | MS.gene36334:intron | 10.0% |
| !!! | TTTTTTGTTTGTTTTTTTAT+GGG | + | chr2.2:2112750-2112769 | MS.gene36334:intron | 10.0% |
| !!! | AAATTATTTACATGTGTTTT+AGG | + | chr2.2:2113243-2113262 | MS.gene36334:intron | 15.0% |
| !!! | GTTTTTTGTTTGTTTTTTTA+TGG | + | chr2.2:2112749-2112768 | MS.gene36334:intron | 15.0% |
| !! | AAAAAAATCATGTCTATTCA+AGG | - | chr2.2:2112797-2112816 | None:intergenic | 20.0% |
| !! | AAAAAATCATGTCTATTCAA+GGG | - | chr2.2:2112796-2112815 | None:intergenic | 20.0% |
| !! | ATATCTTGTAATCTTTGATA+TGG | + | chr2.2:2114046-2114065 | MS.gene36334:intron | 20.0% |
| !! | GTGTGTAAAAAATCAAAATA+AGG | - | chr2.2:2113205-2113224 | None:intergenic | 20.0% |
| !! | TAAAATAAACAACAAAAGTC+TGG | - | chr2.2:2113953-2113972 | None:intergenic | 20.0% |
| !!! | ATTTTACAGCAAGTAAAAAA+AGG | - | chr2.2:2113227-2113246 | None:intergenic | 20.0% |
| ! | AAAATCAAAATAAGGAGCTA+AGG | - | chr2.2:2113197-2113216 | None:intergenic | 25.0% |
| ! | ACAATCTAATAATTGTAGTG+CGG | - | chr2.2:2114024-2114043 | None:intergenic | 25.0% |
| ! | ATATTCGTATTCCTAAAATC+AGG | + | chr2.2:2113404-2113423 | MS.gene36334:intron | 25.0% |
| ! | ATTGTTCTTTGACAAATTAG+AGG | - | chr2.2:2112990-2113009 | None:intergenic | 25.0% |
| ! | CAAAAAAAAGTAAACAGAAC+AGG | - | chr2.2:2112644-2112663 | None:intergenic | 25.0% |
| ! | CTTACATATGAAGATAAAGA+TGG | + | chr2.2:2113512-2113531 | MS.gene36334:CDS | 25.0% |
| ! | GAAAAGAATAAACAGGTTAA+TGG | + | chr2.2:2112528-2112547 | MS.gene36334:CDS | 25.0% |
| ! | TAAGGTAAGTAATTTGAAGA+AGG | - | chr2.2:2113179-2113198 | None:intergenic | 25.0% |
| ! | TGTACATGAAAAGAATAAAC+AGG | + | chr2.2:2112521-2112540 | MS.gene36334:CDS | 25.0% |
| ! | TGTATCAAACTTCTGTAATA+GGG | + | chr2.2:2112913-2112932 | MS.gene36334:intron | 25.0% |
| ! | TTGTATCAAACTTCTGTAAT+AGG | + | chr2.2:2112912-2112931 | MS.gene36334:intron | 25.0% |
| !! | TTACACTCTAGATTTGTTTA+AGG | + | chr2.2:2113872-2113891 | MS.gene36334:intron | 25.0% |
| !!! | AAGTTGACTTATTTTGTCTT+TGG | - | chr2.2:2113662-2113681 | None:intergenic | 25.0% |
| !!! | ACATGATTTTTTTCTCTCTT+TGG | + | chr2.2:2112804-2112823 | MS.gene36334:intron | 25.0% |
| AAGTTCCATATAGTTGTTGT+AGG | - | chr2.2:2113104-2113123 | None:intergenic | 30.0% | |
| AATGTTCTTCAAATCCTTGT+TGG | - | chr2.2:2112253-2112272 | None:intergenic | 30.0% | |
| AATGTTGGAAAAACTCTTGT+TGG | + | chr2.2:2112423-2112442 | MS.gene36334:CDS | 30.0% | |
| AATTAACTGTGTAACCAAAC+AGG | - | chr2.2:2113336-2113355 | None:intergenic | 30.0% | |
| ATGAAGATAAAGATGGAGAT+TGG | + | chr2.2:2113519-2113538 | MS.gene36334:CDS | 30.0% | |
| CAATCTAATAATTGTAGTGC+GGG | - | chr2.2:2114023-2114042 | None:intergenic | 30.0% | |
| CAGCTTAATTAAGCACTTAT+AGG | + | chr2.2:2113590-2113609 | MS.gene36334:intron | 30.0% | |
| TAATCTTTGATATGGATCAC+TGG | + | chr2.2:2114054-2114073 | MS.gene36334:intron | 30.0% | |
| TATCTTATCTAGATCCTGTT+TGG | + | chr2.2:2113319-2113338 | MS.gene36334:intron | 30.0% | |
| TATGTAAAAGTCAGTATGGA+TGG | + | chr2.2:2113046-2113065 | MS.gene36334:CDS | 30.0% | |
| TCTCTATGTAAAAGTCAGTA+TGG | + | chr2.2:2113042-2113061 | MS.gene36334:CDS | 30.0% | |
| TGCAACAAAAAACATCAAAG+AGG | + | chr2.2:2112485-2112504 | MS.gene36334:CDS | 30.0% | |
| ! | AATCGGCTTAACTAAATTGT+TGG | + | chr2.2:2113768-2113787 | MS.gene36334:intron | 30.0% |
| ! | CTTTTGTTCATGTCATGTTT+TGG | + | chr2.2:2112670-2112689 | MS.gene36334:intron | 30.0% |
| !! | AATTGCATTGACCTGATTTT+AGG | - | chr2.2:2113418-2113437 | None:intergenic | 30.0% |
| !!! | ATGGATCACTGGTTTTATAT+TGG | + | chr2.2:2114065-2114084 | MS.gene36334:intron | 30.0% |
| !!! | TTTTTTCGAAACGATCGAAT+TGG | - | chr2.2:2112959-2112978 | None:intergenic | 30.0% |
| AAAGAAACATACTTTGCAGC+AGG | - | chr2.2:2112576-2112595 | None:intergenic | 35.0% | |
| AAAGAAATAACTTACCCCCA+AGG | - | chr2.2:2113563-2113582 | None:intergenic | 35.0% | |
| ATCGTTTCGAAAAAACACGA+TGG | + | chr2.2:2112964-2112983 | MS.gene36334:CDS | 35.0% | |
| ATCTTCTTCTCTCAACTTCA+AGG | + | chr2.2:2112134-2112153 | MS.gene36334:CDS | 35.0% | |
| CAAGACCTACAACAACTATA+TGG | + | chr2.2:2113096-2113115 | MS.gene36334:CDS | 35.0% | |
| CTTTCACCTTTGTCTAATCT+AGG | - | chr2.2:2112699-2112718 | None:intergenic | 35.0% | |
| GAAGGTAAAGTTAGTACCAA+TGG | - | chr2.2:2113161-2113180 | None:intergenic | 35.0% | |
| GTTAAATCGTGATAGTCCAA+TGG | + | chr2.2:2113742-2113761 | MS.gene36334:intron | 35.0% | |
| TGATAGTCCAATGGTTGAAT+CGG | + | chr2.2:2113751-2113770 | MS.gene36334:intron | 35.0% | |
| TGGAGTTTCTCTATGAATGA+TGG | + | chr2.2:2112363-2112382 | MS.gene36334:CDS | 35.0% | |
| TGGTTACCTAGATTAGACAA+AGG | + | chr2.2:2112690-2112709 | MS.gene36334:intron | 35.0% | |
| TGTCATCTTAACATATGTCG+AGG | + | chr2.2:2113975-2113994 | MS.gene36334:intron | 35.0% | |
| TTACATGAGAAAGTCAAGCT+AGG | - | chr2.2:2113278-2113297 | None:intergenic | 35.0% | |
| ! | ACTAAATTGTTGGTTGATGC+AGG | + | chr2.2:2113778-2113797 | MS.gene36334:intron | 35.0% |
| !! | AGATCAACCTTTCTGAGATA+AGG | - | chr2.2:2113076-2113095 | None:intergenic | 35.0% |
| !! | AGCTTCAATACGAAAGTGTT+TGG | - | chr2.2:2113719-2113738 | None:intergenic | 35.0% |
| !! | GCTTCAATACGAAAGTGTTT+GGG | - | chr2.2:2113718-2113737 | None:intergenic | 35.0% |
| !! | GTAGCAACTGATTTTCTATC+AGG | - | chr2.2:2112198-2112217 | None:intergenic | 35.0% |
| !! | TCTATGAATGATGGATCTGA+AGG | + | chr2.2:2112372-2112391 | MS.gene36334:CDS | 35.0% |
| AAACTTCTGTAATAGGGCAC+AGG | + | chr2.2:2112919-2112938 | MS.gene36334:intron | 40.0% | |
| AAAGAACAATGATGAAGCCG+AGG | + | chr2.2:2113000-2113019 | MS.gene36334:CDS | 40.0% | |
| AAGAACAATGATGAAGCCGA+GGG | + | chr2.2:2113001-2113020 | MS.gene36334:CDS | 40.0% | |
| AAGAACCTTGTAGCTAGTGT+TGG | + | chr2.2:2112294-2112313 | MS.gene36334:CDS | 40.0% | |
| ACATAGAGACAGTCAAATCC+TGG | - | chr2.2:2113031-2113050 | None:intergenic | 40.0% | |
| ACTAAGTGAGAGCTCTTTGA+GGG | + | chr2.2:2113463-2113482 | MS.gene36334:CDS | 40.0% | |
| AGGAGACTAAGGATCATGAA+AGG | + | chr2.2:2113819-2113838 | MS.gene36334:CDS | 40.0% | |
| AGTCTCTTTCTTTGCCAACA+AGG | + | chr2.2:2112236-2112255 | MS.gene36334:CDS | 40.0% | |
| ATGCCATTGATGAGTCTTCT+GGG | + | chr2.2:2112337-2112356 | MS.gene36334:CDS | 40.0% | |
| ATGTTCACCTGCTTTACCAT+TGG | + | chr2.2:2113142-2113161 | MS.gene36334:CDS | 40.0% | |
| CTAGCTACAAGGTTCTTCAA+AGG | - | chr2.2:2112291-2112310 | None:intergenic | 40.0% | |
| GTTAGTACCAATGGTAAAGC+AGG | - | chr2.2:2113152-2113171 | None:intergenic | 40.0% | |
| TTTCCCAGAAGACTCATCAA+TGG | - | chr2.2:2112343-2112362 | None:intergenic | 40.0% | |
| TTTCGAAACGATCGAATTGG+TGG | - | chr2.2:2112956-2112975 | None:intergenic | 40.0% | |
| ! | AGTTAAGCCGATTCAACCAT+TGG | - | chr2.2:2113761-2113780 | None:intergenic | 40.0% |
| ! | TCTTTGAGGGATCTTCTTCA+TGG | + | chr2.2:2113476-2113495 | MS.gene36334:CDS | 40.0% |
| ! | TTGATGAGTCTTCTGGGAAA+TGG | + | chr2.2:2112343-2112362 | MS.gene36334:CDS | 40.0% |
| AAGGAAACTGAGCTCAGACT+AGG | + | chr2.2:2112153-2112172 | MS.gene36334:CDS | 45.0% | |
| CAAGAGCCATGGGAAAATCT+AGG | + | chr2.2:2114137-2114156 | MS.gene36334:CDS | 45.0% | |
| CTATCAGGAGATTCACAACC+AGG | - | chr2.2:2112183-2112202 | None:intergenic | 45.0% | |
| CTTGTAGGTGATGTTCCTTG+GGG | + | chr2.2:2113545-2113564 | MS.gene36334:CDS | 45.0% | |
| CTTTGTTCTCTCCAAGAGGA+GGG | + | chr2.2:2112400-2112419 | MS.gene36334:CDS | 45.0% | |
| GACTAAGTGAGAGCTCTTTG+AGG | + | chr2.2:2113462-2113481 | MS.gene36334:CDS | 45.0% | |
| GATGCCATTGATGAGTCTTC+TGG | + | chr2.2:2112336-2112355 | MS.gene36334:CDS | 45.0% | |
| GATGGAGATTGGATGCTTGT+AGG | + | chr2.2:2113530-2113549 | MS.gene36334:CDS | 45.0% | |
| GCTTGTAGGTGATGTTCCTT+GGG | + | chr2.2:2113544-2113563 | MS.gene36334:CDS | 45.0% | |
| TAGCTCCAACACTAGCTACA+AGG | - | chr2.2:2112302-2112321 | None:intergenic | 45.0% | |
| TCACTTAGTCCATCTTTCCC+AGG | - | chr2.2:2113452-2113471 | None:intergenic | 45.0% | |
| TCAGGTCAATGCAATTCTCC+TGG | + | chr2.2:2113422-2113441 | MS.gene36334:intron | 45.0% | |
| TGCTTGTAGGTGATGTTCCT+TGG | + | chr2.2:2113543-2113562 | MS.gene36334:CDS | 45.0% | |
| TGGTGCTCCTTATCTCAGAA+AGG | + | chr2.2:2113066-2113085 | MS.gene36334:CDS | 45.0% | |
| TGTAATAGGGCACAGGTTGT+GGG | + | chr2.2:2112926-2112945 | MS.gene36334:intron | 45.0% | |
| TTGTAGGTGATGTTCCTTGG+GGG | + | chr2.2:2113546-2113565 | MS.gene36334:CDS | 45.0% | |
| TTTCCAACATTCCCTCCTCT+TGG | - | chr2.2:2112414-2112433 | None:intergenic | 45.0% | |
| ! | CTAGATTTTCCCATGGCTCT+TGG | - | chr2.2:2114139-2114158 | None:intergenic | 45.0% |
| ! | GCTAGTGTTGGAGCTAAAAG+AGG | + | chr2.2:2112306-2112325 | MS.gene36334:CDS | 45.0% |
| ! | TTGGCTCCTAGATTTTCCCA+TGG | - | chr2.2:2114146-2114165 | None:intergenic | 45.0% |
| !! | GTCAAATCCTGGTTTTCCCT+CGG | - | chr2.2:2113020-2113039 | None:intergenic | 45.0% |
| AAGGATCATGAAAGGCTCCG+AGG | + | chr2.2:2113827-2113846 | MS.gene36334:CDS | 50.0% | |
| ATGAAAGGCTCCGAGGCAAT+TGG | + | chr2.2:2113834-2113853 | MS.gene36334:CDS | 50.0% | |
| CATACCTAGCCCAATTGCCT+CGG | - | chr2.2:2113847-2113866 | None:intergenic | 50.0% | |
| CCTTAGTCTCCTACACGAGT+CGG | - | chr2.2:2113811-2113830 | None:intergenic | 50.0% | |
| CTGTAATAGGGCACAGGTTG+TGG | + | chr2.2:2112925-2112944 | MS.gene36334:intron | 50.0% | |
| GCAATTCTCCTGGACTTCCT+GGG | + | chr2.2:2113432-2113451 | MS.gene36334:CDS | 50.0% | |
| TCTCCAAGAGGAGGGAATGT+TGG | + | chr2.2:2112408-2112427 | MS.gene36334:CDS | 50.0% | |
| TGAAAGGCTCCGAGGCAATT+GGG | + | chr2.2:2113835-2113854 | MS.gene36334:CDS | 50.0% | |
| TGCAATTCTCCTGGACTTCC+TGG | + | chr2.2:2113431-2113450 | MS.gene36334:CDS | 50.0% | |
| TTTGCAGCTCCAAGAGCCAT+GGG | + | chr2.2:2114127-2114146 | MS.gene36334:intron | 50.0% | |
| ! | GCTGCTTTGTTCTCTCCAAG+AGG | + | chr2.2:2112396-2112415 | MS.gene36334:CDS | 50.0% |
| ! | GCTTTGTTCTCTCCAAGAGG+AGG | + | chr2.2:2112399-2112418 | MS.gene36334:CDS | 50.0% |
| ATAGGGCACAGGTTGTGGGA+TGG | + | chr2.2:2112930-2112949 | MS.gene36334:intron | 55.0% | |
| CCATCTTTCCCAGGAAGTCC+AGG | - | chr2.2:2113443-2113462 | None:intergenic | 55.0% | |
| CCTGGACTTCCTGGGAAAGA+TGG | + | chr2.2:2113440-2113459 | MS.gene36334:CDS | 55.0% | |
| GAGCTCAGACTAGGCTTACC+TGG | + | chr2.2:2112162-2112181 | MS.gene36334:CDS | 55.0% | |
| GATGAAGCCGAGGGAAAACC+AGG | + | chr2.2:2113010-2113029 | MS.gene36334:CDS | 55.0% | |
| GTTTGCAGCTCCAAGAGCCA+TGG | + | chr2.2:2114126-2114145 | MS.gene36334:intron | 55.0% | |
| ! | CCGACTCGTGTAGGAGACTA+AGG | + | chr2.2:2113808-2113827 | MS.gene36334:CDS | 55.0% |
| GTTGCTACTGCTGCTGCTGC+TGG | + | chr2.2:2112210-2112229 | MS.gene36334:CDS | 60.0% | |
| !! | GGATGTTCGCCGACTCGTGT+AGG | + | chr2.2:2113799-2113818 | MS.gene36334:intron | 60.0% |
| GCTACTGCTGCTGCTGCTGG+TGG | + | chr2.2:2112213-2112232 | MS.gene36334:CDS | 65.0% | |
| GGCTCCGAGGCAATTGGGCT+AGG | + | chr2.2:2113840-2113859 | MS.gene36334:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 2112123 | 2114171 | 2112123 | ID=MS.gene36334 |
| chr2.2 | mRNA | 2112123 | 2114171 | 2112123 | ID=MS.gene36334.t1;Parent=MS.gene36334 |
| chr2.2 | exon | 2112123 | 2112583 | 2112123 | ID=MS.gene36334.t1.exon1;Parent=MS.gene36334.t1 |
| chr2.2 | CDS | 2112123 | 2112583 | 2112123 | ID=cds.MS.gene36334.t1;Parent=MS.gene36334.t1 |
| chr2.2 | exon | 2112934 | 2113163 | 2112934 | ID=MS.gene36334.t1.exon2;Parent=MS.gene36334.t1 |
| chr2.2 | CDS | 2112934 | 2113163 | 2112934 | ID=cds.MS.gene36334.t1;Parent=MS.gene36334.t1 |
| chr2.2 | exon | 2113426 | 2113567 | 2113426 | ID=MS.gene36334.t1.exon3;Parent=MS.gene36334.t1 |
| chr2.2 | CDS | 2113426 | 2113567 | 2113426 | ID=cds.MS.gene36334.t1;Parent=MS.gene36334.t1 |
| chr2.2 | exon | 2113800 | 2113861 | 2113800 | ID=MS.gene36334.t1.exon4;Parent=MS.gene36334.t1 |
| chr2.2 | CDS | 2113800 | 2113861 | 2113800 | ID=cds.MS.gene36334.t1;Parent=MS.gene36334.t1 |
| chr2.2 | exon | 2114134 | 2114171 | 2114134 | ID=MS.gene36334.t1.exon5;Parent=MS.gene36334.t1 |
| chr2.2 | CDS | 2114134 | 2114171 | 2114134 | ID=cds.MS.gene36334.t1;Parent=MS.gene36334.t1 |
| Gene Sequence |
| Protein sequence |
