Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38655.t1 | XP_013443349.1 | 95.5 | 354 | 16 | 0 | 103 | 456 | 103 | 456 | 8.70E-165 | 590.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38655.t1 | A0A072TIL7 | 95.5 | 354 | 16 | 0 | 103 | 456 | 103 | 456 | 6.3e-165 | 590.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene38655 | 0.807696 | 4.46E-50 | -1.69E-46 |
| MS.gene049232 | MS.gene38655 | 0.847433 | 1.16E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene38655 | 0.851733 | 7.32E-61 | -1.69E-46 |
| MS.gene049320 | MS.gene38655 | 0.835981 | 1.22E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene38655 | 0.804235 | 2.38E-49 | -1.69E-46 |
| MS.gene050082 | MS.gene38655 | -0.80199 | 6.94E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene38655 | 0.864885 | 8.81E-65 | -1.69E-46 |
| MS.gene050163 | MS.gene38655 | 0.815056 | 1.12E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene38655 | 0.840724 | 7.32E-58 | -1.69E-46 |
| MS.gene050216 | MS.gene38655 | 0.84404 | 9.67E-59 | -1.69E-46 |
| MS.gene050323 | MS.gene38655 | 0.840685 | 7.49E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene38655 | 0.863916 | 1.77E-64 | -1.69E-46 |
| MS.gene050496 | MS.gene38655 | 0.835455 | 1.66E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene38655 | 0.860963 | 1.43E-63 | -1.69E-46 |
| MS.gene050518 | MS.gene38655 | 0.849081 | 4.07E-60 | -1.69E-46 |
| MS.gene050612 | MS.gene38655 | 0.863681 | 2.09E-64 | -1.69E-46 |
| MS.gene050675 | MS.gene38655 | 0.826795 | 2.23E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene38655 | 0.84296 | 1.88E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene38655 | 0.841893 | 3.60E-58 | -1.69E-46 |
| MS.gene050876 | MS.gene38655 | 0.863174 | 3.01E-64 | -1.69E-46 |
| MS.gene050904 | MS.gene38655 | 0.833679 | 4.64E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene38655 | 0.852743 | 3.78E-61 | -1.69E-46 |
| MS.gene051268 | MS.gene38655 | 0.84106 | 5.97E-58 | -1.69E-46 |
| MS.gene051317 | MS.gene38655 | 0.822454 | 2.35E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene38655 | 0.819403 | 1.18E-52 | -1.69E-46 |
| MS.gene051874 | MS.gene38655 | 0.812754 | 3.62E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene38655 | 0.80112 | 1.05E-48 | -1.69E-46 |
| MS.gene052486 | MS.gene38655 | 0.810295 | 1.24E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene38655 | 0.807314 | 5.37E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene38655 | 0.835607 | 1.52E-56 | -1.69E-46 |
| MS.gene053420 | MS.gene38655 | -0.818137 | 2.29E-52 | -1.69E-46 |
| MS.gene053561 | MS.gene38655 | -0.804967 | 1.67E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene38655 | 0.804862 | 1.76E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene38655 | 0.800492 | 1.41E-48 | -1.69E-46 |
| MS.gene054616 | MS.gene38655 | -0.802237 | 6.17E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene38655 | 0.836031 | 1.19E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene38655 | 0.860278 | 2.31E-63 | -1.69E-46 |
| MS.gene055362 | MS.gene38655 | 0.836213 | 1.07E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene38655 | 0.817006 | 4.12E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene38655 | 0.823179 | 1.59E-53 | -1.69E-46 |
| MS.gene055634 | MS.gene38655 | 0.87076 | 1.14E-66 | -1.69E-46 |
| MS.gene055636 | MS.gene38655 | 0.829821 | 4.15E-55 | -1.69E-46 |
| MS.gene055638 | MS.gene38655 | 0.854448 | 1.22E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene38655 | 0.809466 | 1.87E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene38655 | 0.807379 | 5.20E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene38655 | 0.835661 | 1.47E-56 | -1.69E-46 |
| MS.gene055776 | MS.gene38655 | 0.861682 | 8.64E-64 | -1.69E-46 |
| MS.gene056504 | MS.gene38655 | 0.850844 | 1.31E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene38655 | 0.846402 | 2.22E-59 | -1.69E-46 |
| MS.gene056657 | MS.gene38655 | 0.830521 | 2.80E-55 | -1.69E-46 |
| MS.gene056898 | MS.gene38655 | 0.824604 | 7.38E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene38655 | 0.807827 | 4.18E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene38655 | 0.808195 | 3.49E-50 | -1.69E-46 |
| MS.gene058335 | MS.gene38655 | 0.813867 | 2.06E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene38655 | 0.814516 | 1.48E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene38655 | 0.873862 | 1.06E-67 | -1.69E-46 |
| MS.gene05884 | MS.gene38655 | -0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene058978 | MS.gene38655 | -0.81108 | 8.37E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene38655 | 0.865372 | 6.20E-65 | -1.69E-46 |
| MS.gene059023 | MS.gene38655 | 0.801857 | 7.39E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene38655 | 0.830325 | 3.13E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene38655 | 0.806949 | 6.41E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene38655 | 0.850536 | 1.59E-60 | -1.69E-46 |
| MS.gene060595 | MS.gene38655 | -0.811167 | 8.02E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene38655 | 0.854928 | 8.88E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene38655 | 0.844465 | 7.44E-59 | -1.69E-46 |
| MS.gene060778 | MS.gene38655 | 0.812908 | 3.35E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene38655 | 0.826201 | 3.09E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene38655 | 0.839889 | 1.21E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38655.t1 | MTR_0019s0070 | 95.395 | 456 | 21 | 0 | 1 | 456 | 1 | 456 | 0.0 | 787 |
| MS.gene38655.t1 | MTR_1g101330 | 64.894 | 470 | 122 | 14 | 1 | 456 | 1 | 441 | 4.07e-163 | 468 |
| MS.gene38655.t1 | MTR_4g102840 | 39.080 | 348 | 191 | 8 | 119 | 456 | 90 | 426 | 3.00e-58 | 197 |
| MS.gene38655.t1 | MTR_1g103070 | 35.258 | 329 | 133 | 11 | 107 | 421 | 124 | 386 | 6.65e-33 | 130 |
| MS.gene38655.t1 | MTR_8g102400 | 31.448 | 442 | 191 | 19 | 1 | 408 | 5 | 368 | 1.95e-30 | 122 |
| MS.gene38655.t1 | MTR_8g014580 | 36.908 | 401 | 179 | 14 | 25 | 411 | 36 | 376 | 1.39e-28 | 117 |
| MS.gene38655.t1 | MTR_8g024540 | 33.889 | 360 | 163 | 14 | 119 | 414 | 129 | 477 | 1.35e-27 | 115 |
| MS.gene38655.t1 | MTR_1g041430 | 39.752 | 161 | 60 | 5 | 17 | 169 | 32 | 163 | 7.87e-21 | 94.7 |
| MS.gene38655.t1 | MTR_7g114870 | 44.094 | 127 | 58 | 3 | 119 | 244 | 108 | 222 | 2.16e-19 | 90.1 |
| MS.gene38655.t1 | MTR_0047s0040 | 30.244 | 205 | 108 | 7 | 1 | 195 | 9 | 188 | 8.29e-19 | 89.0 |
| MS.gene38655.t1 | MTR_1g095740 | 51.190 | 84 | 40 | 1 | 112 | 195 | 137 | 219 | 3.14e-18 | 87.4 |
| MS.gene38655.t1 | MTR_4g087420 | 45.333 | 75 | 41 | 0 | 119 | 193 | 148 | 222 | 1.43e-16 | 82.4 |
| MS.gene38655.t1 | MTR_4g108140 | 42.063 | 126 | 63 | 4 | 63 | 184 | 47 | 166 | 3.55e-16 | 81.3 |
| MS.gene38655.t1 | MTR_4g108140 | 42.063 | 126 | 63 | 4 | 63 | 184 | 48 | 167 | 3.62e-16 | 81.3 |
| MS.gene38655.t1 | MTR_4g050480 | 68.421 | 57 | 18 | 0 | 112 | 168 | 91 | 147 | 3.98e-16 | 80.5 |
| MS.gene38655.t1 | MTR_4g050480 | 68.421 | 57 | 18 | 0 | 112 | 168 | 92 | 148 | 4.10e-16 | 80.5 |
| MS.gene38655.t1 | MTR_2g100740 | 56.000 | 75 | 30 | 1 | 108 | 179 | 85 | 159 | 6.02e-16 | 79.3 |
| MS.gene38655.t1 | MTR_3g091560 | 38.235 | 170 | 73 | 5 | 109 | 247 | 104 | 272 | 1.67e-15 | 78.6 |
| MS.gene38655.t1 | MTR_7g114700 | 40.909 | 132 | 65 | 2 | 63 | 184 | 74 | 202 | 3.13e-15 | 77.8 |
| MS.gene38655.t1 | MTR_6g033415 | 34.717 | 265 | 123 | 6 | 58 | 287 | 62 | 311 | 4.53e-15 | 77.4 |
| MS.gene38655.t1 | MTR_8g074730 | 57.353 | 68 | 29 | 0 | 113 | 180 | 67 | 134 | 5.27e-15 | 72.4 |
| MS.gene38655.t1 | MTR_1g007920 | 65.000 | 60 | 21 | 0 | 109 | 168 | 114 | 173 | 4.46e-14 | 74.7 |
| MS.gene38655.t1 | MTR_1g007920 | 65.000 | 60 | 21 | 0 | 109 | 168 | 89 | 148 | 4.87e-14 | 74.3 |
| MS.gene38655.t1 | MTR_3g104570 | 61.404 | 57 | 22 | 0 | 112 | 168 | 86 | 142 | 2.59e-13 | 72.0 |
| MS.gene38655.t1 | MTR_1g066800 | 45.333 | 75 | 41 | 0 | 119 | 193 | 118 | 192 | 2.86e-13 | 72.0 |
| MS.gene38655.t1 | MTR_1g066800 | 45.333 | 75 | 41 | 0 | 119 | 193 | 123 | 197 | 3.19e-13 | 72.0 |
| MS.gene38655.t1 | MTR_5g038620 | 47.945 | 73 | 35 | 1 | 112 | 184 | 117 | 186 | 1.38e-12 | 70.5 |
| MS.gene38655.t1 | MTR_1g051810 | 41.958 | 143 | 73 | 2 | 23 | 165 | 21 | 153 | 1.29e-11 | 66.2 |
| MS.gene38655.t1 | MTR_1g023760 | 29.560 | 159 | 97 | 4 | 27 | 177 | 33 | 184 | 1.56e-11 | 67.0 |
| MS.gene38655.t1 | MTR_3g020990 | 50.000 | 64 | 32 | 0 | 130 | 193 | 103 | 166 | 9.28e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38655.t1 | AT5G62070 | 47.816 | 435 | 138 | 17 | 1 | 423 | 1 | 358 | 5.64e-63 | 209 |
| MS.gene38655.t1 | AT5G07240 | 44.444 | 441 | 135 | 19 | 1 | 423 | 1 | 349 | 2.83e-57 | 194 |
| MS.gene38655.t1 | AT5G07240 | 44.444 | 441 | 135 | 19 | 1 | 423 | 47 | 395 | 4.94e-57 | 195 |
| MS.gene38655.t1 | AT4G23060 | 35.150 | 367 | 176 | 14 | 109 | 456 | 160 | 483 | 3.59e-35 | 137 |
| MS.gene38655.t1 | AT1G01110 | 34.111 | 343 | 153 | 12 | 119 | 406 | 123 | 447 | 1.36e-28 | 118 |
| MS.gene38655.t1 | AT3G16490 | 34.663 | 326 | 130 | 10 | 89 | 411 | 90 | 335 | 2.31e-26 | 110 |
| MS.gene38655.t1 | AT4G00820 | 31.217 | 378 | 139 | 16 | 106 | 406 | 120 | 453 | 3.96e-23 | 102 |
| MS.gene38655.t1 | AT3G49260 | 59.740 | 77 | 31 | 0 | 109 | 185 | 112 | 188 | 5.46e-20 | 92.8 |
| MS.gene38655.t1 | AT3G49260 | 59.740 | 77 | 31 | 0 | 109 | 185 | 112 | 188 | 5.46e-20 | 92.8 |
| MS.gene38655.t1 | AT3G49260 | 59.740 | 77 | 31 | 0 | 109 | 185 | 112 | 188 | 5.46e-20 | 92.8 |
| MS.gene38655.t1 | AT3G49260 | 59.740 | 77 | 31 | 0 | 109 | 185 | 112 | 188 | 5.85e-20 | 92.4 |
| MS.gene38655.t1 | AT4G14750 | 60.563 | 71 | 26 | 1 | 114 | 182 | 100 | 170 | 9.40e-20 | 91.3 |
| MS.gene38655.t1 | AT4G14750 | 60.563 | 71 | 26 | 1 | 114 | 182 | 159 | 229 | 1.62e-19 | 91.3 |
| MS.gene38655.t1 | AT4G14750 | 60.563 | 71 | 26 | 1 | 114 | 182 | 159 | 229 | 1.63e-19 | 90.9 |
| MS.gene38655.t1 | AT4G29150 | 32.450 | 302 | 125 | 11 | 114 | 408 | 128 | 357 | 1.76e-19 | 90.5 |
| MS.gene38655.t1 | AT1G51960 | 61.972 | 71 | 27 | 0 | 115 | 185 | 98 | 168 | 1.25e-18 | 87.4 |
| MS.gene38655.t1 | AT3G52290 | 51.899 | 79 | 37 | 1 | 115 | 193 | 107 | 184 | 5.53e-18 | 86.3 |
| MS.gene38655.t1 | AT3G59690 | 53.030 | 66 | 31 | 0 | 120 | 185 | 172 | 237 | 1.45e-17 | 85.5 |
| MS.gene38655.t1 | AT3G59690 | 53.030 | 66 | 31 | 0 | 120 | 185 | 172 | 237 | 1.45e-17 | 85.5 |
| MS.gene38655.t1 | AT1G18840 | 33.784 | 148 | 90 | 4 | 112 | 252 | 105 | 251 | 2.69e-17 | 84.7 |
| MS.gene38655.t1 | AT1G18840 | 33.784 | 148 | 90 | 4 | 112 | 252 | 105 | 251 | 2.69e-17 | 84.7 |
| MS.gene38655.t1 | AT1G18840 | 33.784 | 148 | 90 | 4 | 112 | 252 | 105 | 251 | 2.69e-17 | 84.7 |
| MS.gene38655.t1 | AT5G03040 | 48.750 | 80 | 41 | 0 | 114 | 193 | 112 | 191 | 3.76e-17 | 84.0 |
| MS.gene38655.t1 | AT5G03040 | 48.750 | 80 | 41 | 0 | 114 | 193 | 112 | 191 | 3.76e-17 | 84.0 |
| MS.gene38655.t1 | AT5G03040 | 48.750 | 80 | 41 | 0 | 114 | 193 | 112 | 191 | 3.76e-17 | 84.0 |
| MS.gene38655.t1 | AT5G13460 | 50.685 | 73 | 36 | 0 | 115 | 187 | 109 | 181 | 2.86e-16 | 81.3 |
| MS.gene38655.t1 | AT1G17480 | 57.971 | 69 | 29 | 0 | 119 | 187 | 96 | 164 | 4.09e-16 | 80.1 |
| MS.gene38655.t1 | AT3G49380 | 39.735 | 151 | 60 | 4 | 25 | 175 | 49 | 168 | 4.09e-16 | 80.1 |
| MS.gene38655.t1 | AT3G22190 | 70.909 | 55 | 16 | 0 | 114 | 168 | 85 | 139 | 1.69e-15 | 78.6 |
| MS.gene38655.t1 | AT3G22190 | 70.909 | 55 | 16 | 0 | 114 | 168 | 85 | 139 | 1.69e-15 | 78.6 |
| MS.gene38655.t1 | AT3G22190 | 70.909 | 55 | 16 | 0 | 114 | 168 | 85 | 139 | 1.69e-15 | 78.6 |
| MS.gene38655.t1 | AT3G22190 | 70.909 | 55 | 16 | 0 | 114 | 168 | 85 | 139 | 1.69e-15 | 78.6 |
| MS.gene38655.t1 | AT2G43680 | 49.254 | 67 | 34 | 0 | 119 | 185 | 324 | 390 | 1.96e-15 | 79.3 |
| MS.gene38655.t1 | AT2G43680 | 49.254 | 67 | 34 | 0 | 119 | 185 | 324 | 390 | 1.96e-15 | 79.3 |
| MS.gene38655.t1 | AT2G43680 | 49.254 | 67 | 34 | 0 | 119 | 185 | 324 | 390 | 1.96e-15 | 79.3 |
| MS.gene38655.t1 | AT2G43680 | 49.254 | 67 | 34 | 0 | 119 | 185 | 324 | 390 | 1.96e-15 | 79.3 |
| MS.gene38655.t1 | AT2G43680 | 49.254 | 67 | 34 | 0 | 119 | 185 | 325 | 391 | 2.00e-15 | 79.3 |
| MS.gene38655.t1 | AT1G74690 | 52.055 | 73 | 34 | 1 | 112 | 184 | 109 | 180 | 3.06e-15 | 78.6 |
| MS.gene38655.t1 | AT1G72670 | 62.712 | 59 | 22 | 0 | 119 | 177 | 95 | 153 | 3.37e-15 | 77.8 |
| MS.gene38655.t1 | AT4G10640 | 36.424 | 151 | 66 | 4 | 25 | 175 | 38 | 158 | 1.25e-14 | 75.9 |
| MS.gene38655.t1 | AT2G26180 | 61.538 | 65 | 24 | 1 | 104 | 168 | 72 | 135 | 1.25e-14 | 75.9 |
| MS.gene38655.t1 | AT2G26410 | 45.570 | 79 | 43 | 0 | 105 | 183 | 136 | 214 | 1.02e-13 | 73.6 |
| MS.gene38655.t1 | AT2G26410 | 45.570 | 79 | 43 | 0 | 105 | 183 | 136 | 214 | 1.02e-13 | 73.6 |
| MS.gene38655.t1 | AT3G51380 | 60.606 | 66 | 25 | 1 | 115 | 180 | 36 | 100 | 2.19e-13 | 66.6 |
| MS.gene38655.t1 | AT3G09710 | 28.571 | 182 | 101 | 3 | 114 | 266 | 105 | 286 | 4.99e-12 | 68.2 |
| MS.gene38655.t1 | AT1G19870 | 29.464 | 224 | 122 | 9 | 112 | 325 | 208 | 405 | 6.12e-12 | 68.6 |
| MS.gene38655.t1 | AT1G19870 | 29.464 | 224 | 122 | 9 | 112 | 325 | 25 | 222 | 6.34e-12 | 68.2 |
| MS.gene38655.t1 | AT3G09710 | 43.662 | 71 | 40 | 0 | 114 | 184 | 105 | 175 | 3.21e-11 | 65.5 |
| MS.gene38655.t1 | AT5G03960 | 66.667 | 45 | 15 | 0 | 119 | 163 | 109 | 153 | 6.10e-11 | 64.7 |
| MS.gene38655.t1 | AT5G03960 | 66.667 | 45 | 15 | 0 | 119 | 163 | 110 | 154 | 6.17e-11 | 64.3 |
| MS.gene38655.t1 | AT5G03960 | 66.667 | 45 | 15 | 0 | 119 | 163 | 110 | 154 | 6.17e-11 | 64.3 |
Find 97 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTGTTGGTGGGTGGTTC+TGG | 0.199441 | 6.2:+55724249 | None:intergenic |
| TTTGCAATGTCACCTTAAAT+TGG | 0.238670 | 6.2:+55718015 | None:intergenic |
| GTCTGCTTTCCGAGGTTATT+TGG | 0.243250 | 6.2:-55723929 | MS.gene38655:intron |
| TGGCAAATACTCAATCTTCT+AGG | 0.255891 | 6.2:-55718213 | MS.gene38655:CDS |
| TTGGGAGTAGTACCAATTTA+AGG | 0.275762 | 6.2:-55718027 | MS.gene38655:CDS |
| CTCTGGTTATCCTAGTTATA+TGG | 0.278103 | 6.2:-55718233 | MS.gene38655:CDS |
| ACAAGTAGCTTGAGCAGAAT+TGG | 0.282997 | 6.2:-55718046 | MS.gene38655:CDS |
| ATTCAAGGCCTTTGGGAATC+AGG | 0.291166 | 6.2:-55718118 | MS.gene38655:CDS |
| TTGGTGGGTGGTTCTGGTGG+TGG | 0.293579 | 6.2:+55724255 | None:intergenic |
| TTTATTAGCATCATAGTTAT+CGG | 0.322253 | 6.2:+55724140 | None:intergenic |
| CTAGGTCTATTCAAGGCCTT+TGG | 0.325862 | 6.2:-55718126 | MS.gene38655:CDS |
| AGCAAGTCGTGTGCACATTT+CGG | 0.339048 | 6.2:-55719991 | MS.gene38655:CDS |
| CTAACCAATTTGAACCTAAC+CGG | 0.349715 | 6.2:+55718665 | None:intergenic |
| GTGGACTACTCTCGGCGGTT+CGG | 0.368312 | 6.2:+55718353 | None:intergenic |
| TCGATGAAGCGCCGCCGGTT+TGG | 0.373360 | 6.2:+55718614 | None:intergenic |
| AGGCTAGAGTTTGAGAGATA+TGG | 0.377602 | 6.2:-55718157 | MS.gene38655:CDS |
| GAGCCCGGTTAGGTTCAAAT+TGG | 0.391331 | 6.2:-55718669 | MS.gene38655:CDS |
| TGGACTACTCTCGGCGGTTC+GGG | 0.393860 | 6.2:+55718354 | None:intergenic |
| GTCTATAGTACGAAATTTGA+TGG | 0.409912 | 6.2:-55718943 | MS.gene38655:CDS |
| CTACTAAAAGTGAGAGTTCA+TGG | 0.413052 | 6.2:-55718273 | MS.gene38655:CDS |
| AACTTTCTCCGGCGACTCTT+CGG | 0.423886 | 6.2:-55724297 | MS.gene38655:CDS |
| GAAAACACATGGAGCCAAAC+CGG | 0.429881 | 6.2:-55718628 | MS.gene38655:CDS |
| GTGGTTCTGGTGGTGGATTA+CGG | 0.433997 | 6.2:+55724262 | None:intergenic |
| TAGGTCTATTCAAGGCCTTT+GGG | 0.441659 | 6.2:-55718125 | MS.gene38655:CDS |
| GTTCAAATTGGTTAGACAGT+TGG | 0.455901 | 6.2:-55718657 | MS.gene38655:CDS |
| AGAGATATGGTTCATCTACT+AGG | 0.456026 | 6.2:-55718144 | MS.gene38655:CDS |
| CATTGGTTCGACTTCAGTCT+CGG | 0.466438 | 6.2:-55720019 | MS.gene38655:CDS |
| CAAGTAGCTTGAGCAGAATT+GGG | 0.466598 | 6.2:-55718045 | MS.gene38655:CDS |
| TTGTTGGTGGGTGGTTCTGG+TGG | 0.467901 | 6.2:+55724252 | None:intergenic |
| TGTTAGATTGACAAGTAATA+CGG | 0.469057 | 6.2:-55724040 | MS.gene38655:CDS |
| GACTGGTCGGAGACGGTTGT+CGG | 0.480422 | 6.2:-55723980 | MS.gene38655:CDS |
| TCAAACTCTAGCCTTTGTCT+TGG | 0.489677 | 6.2:+55718166 | None:intergenic |
| ACCTAACCATGAACTTTCTC+CGG | 0.490289 | 6.2:-55724308 | None:intergenic |
| AAATTCTTGAAGTAGATACT+TGG | 0.490960 | 6.2:-55718561 | MS.gene38655:CDS |
| TGCTGCTCATGCTGCCGCTG+AGG | 0.492336 | 6.2:-55724064 | MS.gene38655:CDS |
| TACTCAATCTTCTAGGGCTA+AGG | 0.493624 | 6.2:-55718206 | MS.gene38655:CDS |
| ACGGCTGGAGGAAATTCTGC+TGG | 0.494889 | 6.2:-55724021 | MS.gene38655:CDS |
| AGCGAGTGCAGCTTCAGCAA+CGG | 0.500718 | 6.2:+55724086 | None:intergenic |
| AGTGGGTGTTCATAATCATC+AGG | 0.504957 | 6.2:+55718970 | None:intergenic |
| GAGTCGCCGGAGAAAGTTCA+TGG | 0.505846 | 6.2:+55724302 | None:intergenic |
| TGAGTATTTGCCATATAACT+AGG | 0.506933 | 6.2:+55718223 | None:intergenic |
| CGACCAGTCGTTGGAGTTCG+AGG | 0.508301 | 6.2:+55723994 | None:intergenic |
| GGCAAATACTCAATCTTCTA+GGG | 0.514783 | 6.2:-55718212 | MS.gene38655:CDS |
| ATTAAGAGCACTTAAAGCAT+TGG | 0.515042 | 6.2:-55720114 | MS.gene38655:CDS |
| TTCAAGGCCTTTGGGAATCA+GGG | 0.517803 | 6.2:-55718117 | MS.gene38655:CDS |
| TCGGAGAATGAAGAAGTTGA+AGG | 0.521388 | 6.2:+55724159 | None:intergenic |
| CTGCTCAAGCTACTTGTGGC+TGG | 0.524340 | 6.2:+55718052 | None:intergenic |
| GAAAGCAGACTGAATCTTCA+CGG | 0.526111 | 6.2:+55723942 | None:intergenic |
| GCTTTAGAAGAGCGTTTCGA+CGG | 0.530264 | 6.2:+55718439 | None:intergenic |
| AACTTAGAAAGAGCCCGGTT+AGG | 0.536800 | 6.2:-55718679 | MS.gene38655:CDS |
| CAAGACTCGAAAGTGGTTCG+AGG | 0.538246 | 6.2:-55718312 | MS.gene38655:CDS |
| TACTAAAAGTGAGAGTTCAT+GGG | 0.539030 | 6.2:-55718272 | MS.gene38655:CDS |
| ATGAATTTGGAAGGCAAGGA+GGG | 0.543058 | 6.2:-55720138 | MS.gene38655:intron |
| CGGCTGGAGGAAATTCTGCT+GGG | 0.544359 | 6.2:-55724020 | MS.gene38655:CDS |
| AATCTTCTAGGGCTAAGGTT+AGG | 0.545081 | 6.2:-55718201 | MS.gene38655:CDS |
| TCATCTACTAGGTCTATTCA+AGG | 0.545942 | 6.2:-55718133 | MS.gene38655:CDS |
| ATTGGTTCGACTTCAGTCTC+GGG | 0.550042 | 6.2:-55720018 | MS.gene38655:CDS |
| AATTCTGCTCAAGCTACTTG+TGG | 0.553411 | 6.2:+55718048 | None:intergenic |
| GCTTCTTCAAGACTCGAAAG+TGG | 0.557955 | 6.2:-55718319 | MS.gene38655:CDS |
| AACCGTCTCCGACCAGTCGT+TGG | 0.561104 | 6.2:+55723985 | None:intergenic |
| CTATGTTGTGATTTCAAATG+TGG | 0.568605 | 6.2:+55718535 | None:intergenic |
| TCGTACTATAGACGCGAAGT+GGG | 0.572818 | 6.2:+55718953 | None:intergenic |
| GGACCTCGAACTCCAACGAC+TGG | 0.574278 | 6.2:-55723997 | MS.gene38655:CDS |
| CTCGAAAGTGGTTCGAGGCG+AGG | 0.574732 | 6.2:-55718307 | MS.gene38655:CDS |
| TGATGGATCTTCCATCCTCA+AGG | 0.574798 | 6.2:-55718926 | MS.gene38655:intron |
| TCTTCTATGAAGCATCAGAA+AGG | 0.575782 | 6.2:-55718400 | MS.gene38655:CDS |
| AACCGCCGAGAGTAGTCCAC+AGG | 0.576504 | 6.2:-55718350 | MS.gene38655:CDS |
| TTCGTACTATAGACGCGAAG+TGG | 0.579588 | 6.2:+55718952 | None:intergenic |
| TGAATAATGATGTTGAAAAG+AGG | 0.580336 | 6.2:+55718504 | None:intergenic |
| AATCATGAATACCTTGAGGA+TGG | 0.581465 | 6.2:+55718915 | None:intergenic |
| CTCGAACTCCAACGACTGGT+CGG | 0.585679 | 6.2:-55723993 | MS.gene38655:CDS |
| ACATGAACTTAGAAAGAGCC+CGG | 0.588306 | 6.2:-55718684 | MS.gene38655:CDS |
| CTCCAACGACTGGTCGGAGA+CGG | 0.591250 | 6.2:-55723987 | MS.gene38655:CDS |
| AAATTGGTTAGACAGTTGGA+TGG | 0.594225 | 6.2:-55718653 | MS.gene38655:CDS |
| GAGTGCAGCTTCAGCAACGG+CGG | 0.594777 | 6.2:+55724089 | None:intergenic |
| CGGAGAATGAAGAAGTTGAA+GGG | 0.596390 | 6.2:+55724160 | None:intergenic |
| AGATTGACAAGTAATACGGC+TGG | 0.600552 | 6.2:-55724036 | MS.gene38655:CDS |
| CACAAAGTGCTCCAAGACAA+AGG | 0.601702 | 6.2:-55718177 | MS.gene38655:CDS |
| TAACCAATTTGAACCTAACC+GGG | 0.608700 | 6.2:+55718666 | None:intergenic |
| AAATGCCTGTGGACTACTCT+CGG | 0.609558 | 6.2:+55718345 | None:intergenic |
| AAGATTCAGTCTGCTTTCCG+AGG | 0.610930 | 6.2:-55723937 | MS.gene38655:CDS |
| TTTCTCCGGCGACTCTTCGG+CGG | 0.613489 | 6.2:-55724294 | MS.gene38655:CDS |
| AACACATGGAGCCAAACCGG+CGG | 0.614080 | 6.2:-55718625 | MS.gene38655:CDS |
| TATGAATTTGGAAGGCAAGG+AGG | 0.623814 | 6.2:-55720139 | MS.gene38655:intron |
| GCTAAGACGAATGCAAACAT+TGG | 0.623828 | 6.2:-55720036 | MS.gene38655:CDS |
| TTGACAAGTAATACGGCTGG+AGG | 0.641296 | 6.2:-55724033 | MS.gene38655:CDS |
| GGCTGGAGGAAATTCTGCTG+GGG | 0.645912 | 6.2:-55724019 | MS.gene38655:CDS |
| ACTAAAAGTGAGAGTTCATG+GGG | 0.653519 | 6.2:-55718271 | MS.gene38655:CDS |
| TGGTCGGAGACGGTTGTCGG+AGG | 0.660061 | 6.2:-55723977 | MS.gene38655:CDS |
| AATTAGACCCTGATTCCCAA+AGG | 0.667307 | 6.2:+55718110 | None:intergenic |
| GAAGAAGCCGAAAATGCCTG+TGG | 0.667516 | 6.2:+55718334 | None:intergenic |
| TGTTACATACCAAATAACCT+CGG | 0.675147 | 6.2:+55723920 | None:intergenic |
| AAATTGCAAGCATTAGTGAG+AGG | 0.679400 | 6.2:-55720089 | MS.gene38655:CDS |
| GTTGGATGGAAGAAAACACA+TGG | 0.681144 | 6.2:-55718639 | MS.gene38655:CDS |
| GCTGGAGGAAATTCTGCTGG+GGG | 0.689410 | 6.2:-55724018 | MS.gene38655:CDS |
| TGTCAATCTAACAACCTCAG+CGG | 0.728676 | 6.2:+55724050 | None:intergenic |
| TGCCTGTGGACTACTCTCGG+CGG | 0.763952 | 6.2:+55718348 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGAATGAAATAATAAA+TGG | + | chr6.2:55719499-55719518 | None:intergenic | 10.0% |
| !! | CAAAAATAACAAAATTTATT+TGG | + | chr6.2:55719440-55719459 | None:intergenic | 10.0% |
| !! | GTTTAAAAAAAAAAAATACT+TGG | - | chr6.2:55720040-55720059 | MS.gene38655:CDS | 10.0% |
| !! | TGTATTAATTAATTTAGATT+AGG | - | chr6.2:55720941-55720960 | MS.gene38655:intron | 10.0% |
| !! | TTATTTATTTAGATATATGT+TGG | - | chr6.2:55719948-55719967 | MS.gene38655:intron | 10.0% |
| !!! | GTTTATATTTTTTTTTTTGA+AGG | - | chr6.2:55719068-55719087 | MS.gene38655:intron | 10.0% |
| !!! | TAAACCAAATATATTAATTT+TGG | - | chr6.2:55718587-55718606 | MS.gene38655:CDS | 10.0% |
| !!! | TATAATTTTAGAAACTAAAT+TGG | + | chr6.2:55723021-55723040 | None:intergenic | 10.0% |
| !!! | TATCTTATGTTAAATTTTAT+AGG | - | chr6.2:55719345-55719364 | MS.gene38655:intron | 10.0% |
| !!! | TTACAATAATGAAAATTTTA+TGG | - | chr6.2:55723851-55723870 | MS.gene38655:intron | 10.0% |
| !!! | TTCATATAACATTTTAATAA+TGG | + | chr6.2:55722137-55722156 | None:intergenic | 10.0% |
| !!! | TTCTTTTAACTTTTTTTTAA+AGG | - | chr6.2:55722762-55722781 | MS.gene38655:intron | 10.0% |
| !!! | TTTAGATTTTTGAAAATATT+CGG | - | chr6.2:55723165-55723184 | MS.gene38655:intron | 10.0% |
| !!! | TTTTTTTACAAAAATAAATG+AGG | + | chr6.2:55721177-55721196 | None:intergenic | 10.0% |
| !!! | TTTTTTTATTAGTTAAGAAT+TGG | - | chr6.2:55721842-55721861 | MS.gene38655:intron | 10.0% |
| !! | AAAAGAAAAACTAAAGAAAA+AGG | + | chr6.2:55722821-55722840 | None:intergenic | 15.0% |
| !! | AAAGGTAATAGTATATTAAA+AGG | + | chr6.2:55721529-55721548 | None:intergenic | 15.0% |
| !! | AAGGTAATAGTATATTAAAA+GGG | + | chr6.2:55721528-55721547 | None:intergenic | 15.0% |
| !! | AATGAAATAATAAATGGTTA+AGG | + | chr6.2:55719493-55719512 | None:intergenic | 15.0% |
| !! | ACTACCAAAATTAATATATT+TGG | + | chr6.2:55718594-55718613 | None:intergenic | 15.0% |
| !! | AGATCTCAAAAAAAAAAAAA+AGG | + | chr6.2:55722642-55722661 | None:intergenic | 15.0% |
| !! | ATAAAAACAAAACATTATCA+AGG | - | chr6.2:55721800-55721819 | MS.gene38655:intron | 15.0% |
| !! | ATAATGCACAAATATTTATA+AGG | - | chr6.2:55721746-55721765 | MS.gene38655:intron | 15.0% |
| !! | ATGAAATAATAAATGGTTAA+GGG | + | chr6.2:55719492-55719511 | None:intergenic | 15.0% |
| !! | ATTATTTCATCTCAAATTAA+TGG | + | chr6.2:55721251-55721270 | None:intergenic | 15.0% |
| !! | GAAATATACAAAATTCTAAA+GGG | - | chr6.2:55723063-55723082 | MS.gene38655:intron | 15.0% |
| !! | TAGATTTATAAATCATTGAT+CGG | + | chr6.2:55723137-55723156 | None:intergenic | 15.0% |
| !! | TGAAATATACAAAATTCTAA+AGG | - | chr6.2:55723062-55723081 | MS.gene38655:intron | 15.0% |
| !! | TGTTAAAAAATAGAATTTGA+AGG | + | chr6.2:55718787-55718806 | None:intergenic | 15.0% |
| !! | TTAACAAAAATTGATGTATT+TGG | - | chr6.2:55718549-55718568 | MS.gene38655:CDS | 15.0% |
| !!! | AAAGTATTATTCTTTAGATA+AGG | - | chr6.2:55722945-55722964 | MS.gene38655:intron | 15.0% |
| !!! | AAATTTTCATTATTGTAATC+AGG | + | chr6.2:55723849-55723868 | None:intergenic | 15.0% |
| !!! | AATCCTGTAAATTAAATTTT+AGG | + | chr6.2:55723439-55723458 | None:intergenic | 15.0% |
| !!! | AATTTAAGGATTTGATAATT+TGG | + | chr6.2:55723226-55723245 | None:intergenic | 15.0% |
| !!! | ATTTTATAATGTAAGGTAAA+AGG | + | chr6.2:55721006-55721025 | None:intergenic | 15.0% |
| !!! | CATATTTTGTGTAATTTTTT+GGG | + | chr6.2:55720614-55720633 | None:intergenic | 15.0% |
| !!! | CTTATTTTAGTTAAAGTTTA+TGG | - | chr6.2:55722703-55722722 | MS.gene38655:intron | 15.0% |
| !!! | GAATATCATTTTATAATGTA+AGG | + | chr6.2:55721013-55721032 | None:intergenic | 15.0% |
| !!! | GATGTTTTTTTATATGAATT+TGG | - | chr6.2:55722173-55722192 | MS.gene38655:intron | 15.0% |
| !!! | GTTATTTTTGATGAAATTAT+GGG | - | chr6.2:55719450-55719469 | MS.gene38655:intron | 15.0% |
| !!! | GTTTGTTACATAATAAAATT+AGG | + | chr6.2:55721980-55721999 | None:intergenic | 15.0% |
| !!! | TAATTAAATGATCTACATTT+TGG | - | chr6.2:55720863-55720882 | MS.gene38655:intron | 15.0% |
| !!! | TCAAGGTTTTATAATTTATT+TGG | - | chr6.2:55721817-55721836 | MS.gene38655:intron | 15.0% |
| !!! | TCATATTTTGTGTAATTTTT+TGG | + | chr6.2:55720615-55720634 | None:intergenic | 15.0% |
| !!! | TGGTTTTGTATTTTTAATTT+TGG | - | chr6.2:55720883-55720902 | MS.gene38655:intron | 15.0% |
| !!! | TGTTATTTTTGATGAAATTA+TGG | - | chr6.2:55719449-55719468 | MS.gene38655:intron | 15.0% |
| !!! | TTTTTTTATATGAATTTGGA+AGG | - | chr6.2:55722177-55722196 | MS.gene38655:intron | 15.0% |
| !! | AAAATTTAAAGAGTGACTAT+TGG | - | chr6.2:55718934-55718953 | MS.gene38655:CDS | 20.0% |
| !! | AAATTACACAAAATATGAAG+TGG | - | chr6.2:55720617-55720636 | MS.gene38655:intron | 20.0% |
| !! | AACAAAATTATTCTCCAAAA+TGG | - | chr6.2:55719608-55719627 | MS.gene38655:intron | 20.0% |
| !! | AATACATAAAGAGGTAAAAT+AGG | + | chr6.2:55721503-55721522 | None:intergenic | 20.0% |
| !! | AATAGAATTTCCAAAATCAT+TGG | - | chr6.2:55720009-55720028 | MS.gene38655:CDS | 20.0% |
| !! | AGGTAGTTATAGTTATTAAT+TGG | - | chr6.2:55718862-55718881 | MS.gene38655:intron | 20.0% |
| !! | AGTATATATACTAGCATATA+AGG | - | chr6.2:55718906-55718925 | MS.gene38655:intron | 20.0% |
| !! | ATACATAAAGAGGTAAAATA+GGG | + | chr6.2:55721502-55721521 | None:intergenic | 20.0% |
| !! | ATATTAGATCTACCTATTAA+AGG | + | chr6.2:55719860-55719879 | None:intergenic | 20.0% |
| !! | ATCAAGCTAAAATAGAAAAT+AGG | + | chr6.2:55721576-55721595 | None:intergenic | 20.0% |
| !! | ATTATAAAAGTCAGTCAATT+TGG | - | chr6.2:55723035-55723054 | MS.gene38655:intron | 20.0% |
| !! | CTCAATTAAAAGAACAATAA+TGG | + | chr6.2:55718888-55718907 | None:intergenic | 20.0% |
| !! | GAGATTACTAAATTATTACT+AGG | - | chr6.2:55721337-55721356 | MS.gene38655:intron | 20.0% |
| !! | GATCAATGATTTATAAATCT+AGG | - | chr6.2:55723136-55723155 | MS.gene38655:intron | 20.0% |
| !! | TATCAAATCCTTAAATTTCA+GGG | - | chr6.2:55723229-55723248 | MS.gene38655:intron | 20.0% |
| !! | TATCGAGTTTAAAAAAATGT+TGG | - | chr6.2:55718683-55718702 | MS.gene38655:CDS | 20.0% |
| !! | TCAACAATTCAATTCTTTAA+TGG | + | chr6.2:55718829-55718848 | None:intergenic | 20.0% |
| !! | TCAAGCTAAAATAGAAAATA+GGG | + | chr6.2:55721575-55721594 | None:intergenic | 20.0% |
| !! | TCTCTACAATAAATATGTAA+GGG | - | chr6.2:55719525-55719544 | MS.gene38655:intron | 20.0% |
| !! | TTATCAAATCCTTAAATTTC+AGG | - | chr6.2:55723228-55723247 | MS.gene38655:intron | 20.0% |
| !! | TTCAATGTTTGTAAATTTGA+TGG | - | chr6.2:55722568-55722587 | MS.gene38655:intron | 20.0% |
| !! | TTTATTAGCATCATAGTTAT+CGG | + | chr6.2:55718187-55718206 | None:intergenic | 20.0% |
| !!! | AACATCAATGTTTCATATTT+TGG | - | chr6.2:55721711-55721730 | MS.gene38655:intron | 20.0% |
| !!! | ACAAAATTTATTTGGTTTCT+TGG | + | chr6.2:55719432-55719451 | None:intergenic | 20.0% |
| !!! | ACATCAATGTTTCATATTTT+GGG | - | chr6.2:55721712-55721731 | MS.gene38655:intron | 20.0% |
| !!! | AGAATTGAATTGTTGATTTT+AGG | - | chr6.2:55718833-55718852 | MS.gene38655:intron | 20.0% |
| !!! | ATAAAAAAGAGCATTGATAA+TGG | - | chr6.2:55721422-55721441 | MS.gene38655:intron | 20.0% |
| !!! | ATGTGTCAAAATCAAAATTT+TGG | + | chr6.2:55719157-55719176 | None:intergenic | 20.0% |
| !!! | TAACTGTGAATAAGATTTTA+AGG | + | chr6.2:55718463-55718482 | None:intergenic | 20.0% |
| !!! | TAAGTCATATTAGTTTATCT+TGG | - | chr6.2:55721670-55721689 | MS.gene38655:intron | 20.0% |
| !!! | TAATGTTTTTTCAACTTTTG+CGG | - | chr6.2:55721130-55721149 | MS.gene38655:intron | 20.0% |
| !!! | TGTAATTTTTTGGGTATAAT+TGG | + | chr6.2:55720605-55720624 | None:intergenic | 20.0% |
| !!! | TTGTGAGGTTTTATTTTTTA+GGG | - | chr6.2:55718745-55718764 | MS.gene38655:intron | 20.0% |
| !!! | TTTTTAGTACTTGTTGATTT+AGG | - | chr6.2:55721640-55721659 | MS.gene38655:intron | 20.0% |
| ! | AAAAGGGAAAATACATAAAG+AGG | + | chr6.2:55721512-55721531 | None:intergenic | 25.0% |
| ! | AAAATATCATGTTGCAAACT+AGG | - | chr6.2:55722914-55722933 | MS.gene38655:intron | 25.0% |
| ! | AAAGAGCTATATAGGTTATT+AGG | - | chr6.2:55720683-55720702 | MS.gene38655:intron | 25.0% |
| ! | AAATAAGTTTGATATAGGCT+AGG | - | chr6.2:55720065-55720084 | MS.gene38655:CDS | 25.0% |
| ! | AAATTCTTGAAGTAGATACT+TGG | - | chr6.2:55723763-55723782 | MS.gene38655:intron | 25.0% |
| ! | AATGAGGATTCACTTATTAA+TGG | + | chr6.2:55721161-55721180 | None:intergenic | 25.0% |
| ! | AATGGACAAGTATTATGAAA+CGG | - | chr6.2:55719626-55719645 | MS.gene38655:intron | 25.0% |
| ! | AATTTGAAGAAAAAAGTCAG+AGG | + | chr6.2:55723324-55723343 | None:intergenic | 25.0% |
| ! | ACAAAAAAGACAAAAGAACA+TGG | - | chr6.2:55718094-55718113 | MS.gene38655:CDS | 25.0% |
| ! | ACACACTTATATTCCAAAAA+TGG | + | chr6.2:55720431-55720450 | None:intergenic | 25.0% |
| ! | AGTAAAAATGTTATTCCCAA+TGG | - | chr6.2:55718496-55718515 | MS.gene38655:CDS | 25.0% |
| ! | ATCAGTCATACATTTCATTA+AGG | - | chr6.2:55719801-55719820 | MS.gene38655:intron | 25.0% |
| ! | CAATTTCACTATTCACTATT+GGG | + | chr6.2:55718642-55718661 | None:intergenic | 25.0% |
| ! | CACACTTATATTCCAAAAAT+GGG | + | chr6.2:55720430-55720449 | None:intergenic | 25.0% |
| ! | CTCTCTACAATAAATATGTA+AGG | - | chr6.2:55719524-55719543 | MS.gene38655:intron | 25.0% |
| ! | TAATAACCTATATAGCTCTT+TGG | + | chr6.2:55720684-55720703 | None:intergenic | 25.0% |
| ! | TATCTTGGTATAAGTCATAT+TGG | - | chr6.2:55721685-55721704 | MS.gene38655:intron | 25.0% |
| ! | TATTCTTTAGATAAGGCTTT+AGG | - | chr6.2:55722952-55722971 | MS.gene38655:intron | 25.0% |
| ! | TCAATTTCACTATTCACTAT+TGG | + | chr6.2:55718643-55718662 | None:intergenic | 25.0% |
| ! | TCACAATACTTTCCTTTAAT+AGG | - | chr6.2:55719845-55719864 | MS.gene38655:intron | 25.0% |
| ! | TCAGTCATACATTTCATTAA+GGG | - | chr6.2:55719802-55719821 | MS.gene38655:intron | 25.0% |
| ! | TGAATAATGATGTTGAAAAG+AGG | + | chr6.2:55723823-55723842 | None:intergenic | 25.0% |
| ! | TGACATTAATTTAGATCAGA+TGG | - | chr6.2:55721310-55721329 | MS.gene38655:intron | 25.0% |
| ! | TGAGTAAGAAAAAACTCTAA+TGG | - | chr6.2:55722085-55722104 | MS.gene38655:intron | 25.0% |
| ! | TGGTCAAATAAGTTTGATAT+AGG | - | chr6.2:55720060-55720079 | MS.gene38655:CDS | 25.0% |
| ! | TGTTAGATTGACAAGTAATA+CGG | - | chr6.2:55718284-55718303 | MS.gene38655:CDS | 25.0% |
| ! | TTTAATATGTGCACTTACAA+CGG | + | chr6.2:55721219-55721238 | None:intergenic | 25.0% |
| !! | AATAAAACCTCACAACTTTT+TGG | + | chr6.2:55718740-55718759 | None:intergenic | 25.0% |
| !! | AATCATTCGAGTTCTTAATA+GGG | + | chr6.2:55722066-55722085 | None:intergenic | 25.0% |
| !! | AATTTGCACCAAACTTTTAA+AGG | - | chr6.2:55722545-55722564 | MS.gene38655:intron | 25.0% |
| !! | ACAATTTGTTTCCCATAAAA+AGG | + | chr6.2:55718523-55718542 | None:intergenic | 25.0% |
| !! | ACATTGAACCTTTAAAAGTT+TGG | + | chr6.2:55722556-55722575 | None:intergenic | 25.0% |
| !! | ATATTTTGTGAGTGTGTAAA+TGG | - | chr6.2:55719095-55719114 | MS.gene38655:intron | 25.0% |
| !! | CAGAAATAGATTCTGATTTT+AGG | - | chr6.2:55724237-55724256 | MS.gene38655:CDS | 25.0% |
| !! | CATCAATGTTTCATATTTTG+GGG | - | chr6.2:55721713-55721732 | MS.gene38655:intron | 25.0% |
| !! | GTGCCTAAAATTTAATTTAC+AGG | - | chr6.2:55723433-55723452 | MS.gene38655:intron | 25.0% |
| !! | TAAAGTTTATGGTAACTTGT+TGG | - | chr6.2:55722714-55722733 | MS.gene38655:intron | 25.0% |
| !! | TTCAAAATACATGTCCATTT+TGG | - | chr6.2:55719392-55719411 | MS.gene38655:intron | 25.0% |
| !! | TTCATAATACTTGTCCATTT+TGG | + | chr6.2:55719625-55719644 | None:intergenic | 25.0% |
| !! | TTTGCTACTAAAAGTTCTAA+GGG | + | chr6.2:55722608-55722627 | None:intergenic | 25.0% |
| !!! | AAAAAGTTTGATTTGCTTAC+AGG | + | chr6.2:55722397-55722416 | None:intergenic | 25.0% |
| !!! | AAAAGTTTGATTTGCTTACA+GGG | + | chr6.2:55722396-55722415 | None:intergenic | 25.0% |
| !!! | AATGGACATGTATTTTGAAA+CGG | + | chr6.2:55719391-55719410 | None:intergenic | 25.0% |
| !!! | ATAAGATTTTAAGGACATCA+TGG | + | chr6.2:55718454-55718473 | None:intergenic | 25.0% |
| !!! | ATCAACCATGTTTTAGATAA+TGG | - | chr6.2:55720657-55720676 | MS.gene38655:intron | 25.0% |
| !!! | ATCAATGTTTCATATTTTGG+GGG | - | chr6.2:55721714-55721733 | MS.gene38655:intron | 25.0% |
| !!! | ATTCTTTGCATTTTTTTCCT+TGG | - | chr6.2:55722005-55722024 | MS.gene38655:intron | 25.0% |
| !!! | GTAGTTACTAGTTTCATTTT+TGG | - | chr6.2:55720737-55720756 | MS.gene38655:intron | 25.0% |
| !!! | GTTGTGAGGTTTTATTTTTT+AGG | - | chr6.2:55718744-55718763 | MS.gene38655:intron | 25.0% |
| !!! | TACTAGTTTCATTTTTGGTA+GGG | - | chr6.2:55720742-55720761 | MS.gene38655:intron | 25.0% |
| !!! | TCAACCATGTTTTAGATAAT+GGG | - | chr6.2:55720658-55720677 | MS.gene38655:intron | 25.0% |
| !!! | TCTTTTGTCTTTTTTGTTGT+TGG | + | chr6.2:55718091-55718110 | None:intergenic | 25.0% |
| !!! | TTACTAGTTTCATTTTTGGT+AGG | - | chr6.2:55720741-55720760 | MS.gene38655:intron | 25.0% |
| !!! | TTCAACTGCATTGATTAATA+GGG | + | chr6.2:55720712-55720731 | None:intergenic | 25.0% |
| !!! | TTCTTTGCATTTTTTTCCTT+GGG | - | chr6.2:55722006-55722025 | MS.gene38655:intron | 25.0% |
| !!! | TTTTTTCTTCAAATTGTTGC+AGG | - | chr6.2:55723329-55723348 | MS.gene38655:intron | 25.0% |
| AAAATAGGGTTGAAGCTTAT+GGG | + | chr6.2:55721488-55721507 | None:intergenic | 30.0% | |
| AAATAGGGAACAAATAAGCA+TGG | + | chr6.2:55721560-55721579 | None:intergenic | 30.0% | |
| AAATATTCAGACTTGAGAGT+TGG | + | chr6.2:55719894-55719913 | None:intergenic | 30.0% | |
| AAGCATTATAGCCTAACTAA+AGG | + | chr6.2:55721081-55721100 | None:intergenic | 30.0% | |
| AATATTCAGACTTGAGAGTT+GGG | + | chr6.2:55719893-55719912 | None:intergenic | 30.0% | |
| AATGTAAGTGGTGTAAAAGT+GGG | - | chr6.2:55721371-55721390 | MS.gene38655:intron | 30.0% | |
| AGAGAAAGCAACTAACTTTA+AGG | - | chr6.2:55721046-55721065 | MS.gene38655:intron | 30.0% | |
| AGGATTCACTTATTAATGGT+TGG | + | chr6.2:55721157-55721176 | None:intergenic | 30.0% | |
| AGTATACATGTAACATGTGT+TGG | - | chr6.2:55723545-55723564 | MS.gene38655:intron | 30.0% | |
| ATAAGCATGGAATGTCAAAA+AGG | + | chr6.2:55721547-55721566 | None:intergenic | 30.0% | |
| ATCAGAGTTGTCAAAATAGT+TGG | - | chr6.2:55720284-55720303 | MS.gene38655:intron | 30.0% | |
| CATTTAGTCCCTGAAATTTA+AGG | + | chr6.2:55723240-55723259 | None:intergenic | 30.0% | |
| CCACCTTTCTTTAATTGTTA+TGG | + | chr6.2:55720473-55720492 | None:intergenic | 30.0% | |
| CCATAACAATTAAAGAAAGG+TGG | - | chr6.2:55720470-55720489 | MS.gene38655:intron | 30.0% | |
| CTATGTTGTGATTTCAAATG+TGG | + | chr6.2:55723792-55723811 | None:intergenic | 30.0% | |
| GGACCATAACAATTAAAGAA+AGG | - | chr6.2:55720467-55720486 | MS.gene38655:intron | 30.0% | |
| GGATTCATAGATGATTTACA+TGG | - | chr6.2:55723454-55723473 | MS.gene38655:intron | 30.0% | |
| GTAGGCATCATCATATAATT+TGG | + | chr6.2:55723192-55723211 | None:intergenic | 30.0% | |
| GTCATTGAAATCGTAAATGT+TGG | - | chr6.2:55722442-55722461 | MS.gene38655:intron | 30.0% | |
| GTCTATAGTACGAAATTTGA+TGG | - | chr6.2:55723381-55723400 | MS.gene38655:intron | 30.0% | |
| TAAAATAGGGTTGAAGCTTA+TGG | + | chr6.2:55721489-55721508 | None:intergenic | 30.0% | |
| TAACAAACACGTTTACATAG+TGG | + | chr6.2:55721456-55721475 | None:intergenic | 30.0% | |
| TAAGTTACACCTTCTAACAT+AGG | + | chr6.2:55720098-55720117 | None:intergenic | 30.0% | |
| TACCATAGCAGTAGTAAAAA+AGG | + | chr6.2:55719694-55719713 | None:intergenic | 30.0% | |
| TACTAAAAGTGAGAGTTCAT+GGG | - | chr6.2:55724052-55724071 | MS.gene38655:CDS | 30.0% | |
| TATAATTGGACATACCTTTC+TGG | + | chr6.2:55720591-55720610 | None:intergenic | 30.0% | |
| TCAGAGTTGTCAAAATAGTT+GGG | - | chr6.2:55720285-55720304 | MS.gene38655:intron | 30.0% | |
| TCAGCTTCATCATTTATCTT+TGG | + | chr6.2:55720401-55720420 | None:intergenic | 30.0% | |
| TGAGTATTTGCCATATAACT+AGG | + | chr6.2:55724104-55724123 | None:intergenic | 30.0% | |
| TGTTACATACCAAATAACCT+CGG | + | chr6.2:55718407-55718426 | None:intergenic | 30.0% | |
| TTAAAAATGGTATATCCGGA+CGG | - | chr6.2:55720260-55720279 | MS.gene38655:intron | 30.0% | |
| TTACTGCAATTTCTCCAAAA+TGG | + | chr6.2:55719409-55719428 | None:intergenic | 30.0% | |
| TTATATGAATTTGGAAGGCA+AGG | - | chr6.2:55722182-55722201 | MS.gene38655:intron | 30.0% | |
| ! | ACAAACAAGTCCAATGATTT+TGG | + | chr6.2:55720022-55720041 | None:intergenic | 30.0% |
| ! | ACTTTTACACCACTTACATT+GGG | + | chr6.2:55721371-55721390 | None:intergenic | 30.0% |
| ! | CAATCATTCGAGTTCTTAAT+AGG | + | chr6.2:55722067-55722086 | None:intergenic | 30.0% |
| ! | GAAGCATAATTTAAAACCCA+AGG | + | chr6.2:55722025-55722044 | None:intergenic | 30.0% |
| ! | GTTTGCTACTAAAAGTTCTA+AGG | + | chr6.2:55722609-55722628 | None:intergenic | 30.0% |
| ! | TAGATATATGTTGGTCTATG+AGG | - | chr6.2:55719957-55719976 | MS.gene38655:CDS | 30.0% |
| !! | AGCTTGATGACTTAAGTTTT+TGG | - | chr6.2:55721588-55721607 | MS.gene38655:intron | 30.0% |
| !! | AGTACTTGTTGATTTAGGTT+TGG | - | chr6.2:55721645-55721664 | MS.gene38655:intron | 30.0% |
| !! | ATTAAGAGCACTTAAAGCAT+TGG | - | chr6.2:55722210-55722229 | MS.gene38655:intron | 30.0% |
| !! | CATTAAGGGTATCATTAGTT+AGG | - | chr6.2:55719816-55719835 | MS.gene38655:intron | 30.0% |
| !! | CCATTTTTAACGGCTAAAAT+CGG | + | chr6.2:55720250-55720269 | None:intergenic | 30.0% |
| !! | CTTCAACTGCATTGATTAAT+AGG | + | chr6.2:55720713-55720732 | None:intergenic | 30.0% |
| !! | TCACTTTTAGTAGGTGTAAA+AGG | + | chr6.2:55724044-55724063 | None:intergenic | 30.0% |
| !! | TCCGGATATACCATTTTTAA+CGG | + | chr6.2:55720260-55720279 | None:intergenic | 30.0% |
| !! | TGGGATTTTAGAAATAGTTG+AGG | + | chr6.2:55720147-55720166 | None:intergenic | 30.0% |
| !!! | AACCTTTTTTACTACTGCTA+TGG | - | chr6.2:55719689-55719708 | MS.gene38655:intron | 30.0% |
| !!! | AACTTAGGACCATTAGTTTT+TGG | - | chr6.2:55719212-55719231 | MS.gene38655:intron | 30.0% |
| !!! | ACTTAAGTTTTTGGCAATGT+TGG | - | chr6.2:55721597-55721616 | MS.gene38655:intron | 30.0% |
| !!! | GAATTGTTGATTTTAGGTGA+TGG | - | chr6.2:55718839-55718858 | MS.gene38655:intron | 30.0% |
| !!! | GGTGTAACTTATTTTGATCA+CGG | - | chr6.2:55720107-55720126 | MS.gene38655:CDS | 30.0% |
| !!! | TTGTCTTTTTTGTTGTTGGT+GGG | + | chr6.2:55718087-55718106 | None:intergenic | 30.0% |
| !!! | TTTGTCTTTTTTGTTGTTGG+TGG | + | chr6.2:55718088-55718107 | None:intergenic | 30.0% |
| AAAGTAGCCAAAAAGTTGTG+AGG | - | chr6.2:55718730-55718749 | MS.gene38655:intron | 35.0% | |
| AAATTGCAAGCATTAGTGAG+AGG | - | chr6.2:55722235-55722254 | MS.gene38655:intron | 35.0% | |
| AAATTGGTTAGACAGTTGGA+TGG | - | chr6.2:55723671-55723690 | MS.gene38655:intron | 35.0% | |
| AATCATGAATACCTTGAGGA+TGG | + | chr6.2:55723412-55723431 | None:intergenic | 35.0% | |
| AATGATTGCTCAAAGAGTAG+TGG | + | chr6.2:55721948-55721967 | None:intergenic | 35.0% | |
| AATTAAAGAAAGGTGGCAAC+GGG | - | chr6.2:55720477-55720496 | MS.gene38655:intron | 35.0% | |
| AATTCAACAACTTACGTCGA+TGG | - | chr6.2:55722510-55722529 | MS.gene38655:intron | 35.0% | |
| ACTAAAAGTGAGAGTTCATG+GGG | - | chr6.2:55724053-55724072 | MS.gene38655:CDS | 35.0% | |
| ACTTATGATGCTTTCCAATC+TGG | - | chr6.2:55720563-55720582 | MS.gene38655:intron | 35.0% | |
| AGAGATATGGTTCATCTACT+AGG | - | chr6.2:55724180-55724199 | MS.gene38655:CDS | 35.0% | |
| AGAGTTGTCAAAATAGTTGG+GGG | - | chr6.2:55720287-55720306 | MS.gene38655:intron | 35.0% | |
| AGATCCCAAATTGCAAGAAT+TGG | + | chr6.2:55722857-55722876 | None:intergenic | 35.0% | |
| ATACACGCACCAAAAACTAA+TGG | + | chr6.2:55719224-55719243 | None:intergenic | 35.0% | |
| ATGTAAGTGGTGTAAAAGTG+GGG | - | chr6.2:55721372-55721391 | MS.gene38655:intron | 35.0% | |
| ATTTCCGAGTAATGTTTGTG+TGG | - | chr6.2:55718975-55718994 | MS.gene38655:CDS | 35.0% | |
| CAATGTAAGTGGTGTAAAAG+TGG | - | chr6.2:55721370-55721389 | MS.gene38655:intron | 35.0% | |
| CAATTAAAGAAAGGTGGCAA+CGG | - | chr6.2:55720476-55720495 | MS.gene38655:intron | 35.0% | |
| CAGAGTTGTCAAAATAGTTG+GGG | - | chr6.2:55720286-55720305 | MS.gene38655:intron | 35.0% | |
| CCAAATTGCAAGAATTGGTA+GGG | + | chr6.2:55722852-55722871 | None:intergenic | 35.0% | |
| CCTACCAATTCTTGCAATTT+GGG | - | chr6.2:55722850-55722869 | MS.gene38655:intron | 35.0% | |
| CTAACCAATTTGAACCTAAC+CGG | + | chr6.2:55723662-55723681 | None:intergenic | 35.0% | |
| CTACTAAAAGTGAGAGTTCA+TGG | - | chr6.2:55724051-55724070 | MS.gene38655:CDS | 35.0% | |
| CTCTGGTTATCCTAGTTATA+TGG | - | chr6.2:55724091-55724110 | MS.gene38655:CDS | 35.0% | |
| CTTATGATGCTTTCCAATCT+GGG | - | chr6.2:55720564-55720583 | MS.gene38655:intron | 35.0% | |
| GACAAGTATTATGAAACGGA+GGG | - | chr6.2:55719630-55719649 | MS.gene38655:intron | 35.0% | |
| GCCGTTAAAAATGGTATATC+CGG | - | chr6.2:55720256-55720275 | MS.gene38655:intron | 35.0% | |
| GGCAAATACTCAATCTTCTA+GGG | - | chr6.2:55724112-55724131 | MS.gene38655:CDS | 35.0% | |
| GTAGGGCATGTTATTATATG+TGG | - | chr6.2:55720759-55720778 | MS.gene38655:intron | 35.0% | |
| GTTCAAATTGGTTAGACAGT+TGG | - | chr6.2:55723667-55723686 | MS.gene38655:intron | 35.0% | |
| TAACCAATTTGAACCTAACC+GGG | + | chr6.2:55723661-55723680 | None:intergenic | 35.0% | |
| TCATAACGCACAAAATACGT+GGG | + | chr6.2:55720543-55720562 | None:intergenic | 35.0% | |
| TCATCTACTAGGTCTATTCA+AGG | - | chr6.2:55724191-55724210 | MS.gene38655:CDS | 35.0% | |
| TGAAAATGTACATCCAGAGT+GGG | + | chr6.2:55720171-55720190 | None:intergenic | 35.0% | |
| TGGCAAATACTCAATCTTCT+AGG | - | chr6.2:55724111-55724130 | MS.gene38655:CDS | 35.0% | |
| TTCATAACGCACAAAATACG+TGG | + | chr6.2:55720544-55720563 | None:intergenic | 35.0% | |
| TTCCCATAAAAAGGACCATT+GGG | + | chr6.2:55718514-55718533 | None:intergenic | 35.0% | |
| TTGGGAGTAGTACCAATTTA+AGG | - | chr6.2:55724297-55724316 | MS.gene38655:CDS | 35.0% | |
| TTGTTGGAAAAGCTAGGTAA+TGG | - | chr6.2:55722730-55722749 | MS.gene38655:intron | 35.0% | |
| TTTATCACAAGTCACAGCAA+TGG | + | chr6.2:55721785-55721804 | None:intergenic | 35.0% | |
| TTTCCCATAAAAAGGACCAT+TGG | + | chr6.2:55718515-55718534 | None:intergenic | 35.0% | |
| ! | AGCTGAAAATGACCCATTTT+TGG | - | chr6.2:55720415-55720434 | MS.gene38655:intron | 35.0% |
| ! | ATTCCCAATGGTCCTTTTTA+TGG | - | chr6.2:55718508-55718527 | MS.gene38655:CDS | 35.0% |
| ! | CACTTTTACACCACTTACAT+TGG | + | chr6.2:55721372-55721391 | None:intergenic | 35.0% |
| ! | GTTTGCACTTGTTAGAACTT+AGG | - | chr6.2:55719197-55719216 | MS.gene38655:intron | 35.0% |
| ! | TCTGGATGTACATTTTCAGA+TGG | - | chr6.2:55720173-55720192 | MS.gene38655:intron | 35.0% |
| ! | TCTTCTATGAAGCATCAGAA+AGG | - | chr6.2:55723924-55723943 | MS.gene38655:intron | 35.0% |
| ! | TGAAGGGTCAGAATTTTTGT+TGG | + | chr6.2:55718151-55718170 | None:intergenic | 35.0% |
| ! | TTCCCAATGGTCCTTTTTAT+GGG | - | chr6.2:55718509-55718528 | MS.gene38655:CDS | 35.0% |
| ! | TTGGCCCATTATCTAAAACA+TGG | + | chr6.2:55720665-55720684 | None:intergenic | 35.0% |
| !! | AGATTCTGATTTTAGGAGCA+AGG | - | chr6.2:55724244-55724263 | MS.gene38655:CDS | 35.0% |
| !! | ATGAAGCTTGAAGTCGATTT+TGG | - | chr6.2:55720823-55720842 | MS.gene38655:intron | 35.0% |
| !! | CATGAACTCTCACTTTTAGT+AGG | + | chr6.2:55724053-55724072 | None:intergenic | 35.0% |
| !! | CCGATTTTAGCCGTTAAAAA+TGG | - | chr6.2:55720247-55720266 | MS.gene38655:intron | 35.0% |
| !! | CTAAAACATGGTTGATGATG+TGG | + | chr6.2:55720653-55720672 | None:intergenic | 35.0% |
| !! | CTTTAGATAAGGCTTTAGGT+TGG | - | chr6.2:55722956-55722975 | MS.gene38655:intron | 35.0% |
| !! | GGATTTTTCAATGCTTACTC+TGG | - | chr6.2:55724074-55724093 | MS.gene38655:CDS | 35.0% |
| !! | TCTCTAAAACCACACTTTGT+GGG | - | chr6.2:55720965-55720984 | MS.gene38655:intron | 35.0% |
| !! | TTCTCTAAAACCACACTTTG+TGG | - | chr6.2:55720964-55720983 | MS.gene38655:intron | 35.0% |
| !!! | GACATGTATTTTGAAACGGA+GGG | + | chr6.2:55719387-55719406 | None:intergenic | 35.0% |
| !!! | TTGTTGATTTTAGGTGATGG+AGG | - | chr6.2:55718842-55718861 | MS.gene38655:intron | 35.0% |
| AAGTGGGGATAATGCAACAT+AGG | - | chr6.2:55721387-55721406 | MS.gene38655:intron | 40.0% | |
| AATGGGCCAAAGAGCTATAT+AGG | - | chr6.2:55720675-55720694 | MS.gene38655:intron | 40.0% | |
| AATTAGACCCTGATTCCCAA+AGG | + | chr6.2:55724217-55724236 | None:intergenic | 40.0% | |
| AATTCTGCTCAAGCTACTTG+TGG | + | chr6.2:55724279-55724298 | None:intergenic | 40.0% | |
| ACAAGTAGCTTGAGCAGAAT+TGG | - | chr6.2:55724278-55724297 | MS.gene38655:CDS | 40.0% | |
| ACATGAACTTAGAAAGAGCC+CGG | - | chr6.2:55723640-55723659 | MS.gene38655:intron | 40.0% | |
| AGATTGACAAGTAATACGGC+TGG | - | chr6.2:55718288-55718307 | MS.gene38655:CDS | 40.0% | |
| AGGCTAGAGTTTGAGAGATA+TGG | - | chr6.2:55724167-55724186 | MS.gene38655:CDS | 40.0% | |
| AGTGGGTGTTCATAATCATC+AGG | + | chr6.2:55723357-55723376 | None:intergenic | 40.0% | |
| ATGAATTTGGAAGGCAAGGA+GGG | - | chr6.2:55722186-55722205 | MS.gene38655:intron | 40.0% | |
| CAAGTAGCTTGAGCAGAATT+GGG | - | chr6.2:55724279-55724298 | MS.gene38655:CDS | 40.0% | |
| CACGAATCATGAATACCTTG+AGG | + | chr6.2:55723416-55723435 | None:intergenic | 40.0% | |
| CATAACGCACAAAATACGTG+GGG | + | chr6.2:55720542-55720561 | None:intergenic | 40.0% | |
| CCCAAATTGCAAGAATTGGT+AGG | + | chr6.2:55722853-55722872 | None:intergenic | 40.0% | |
| CCCTACCAATTCTTGCAATT+TGG | - | chr6.2:55722849-55722868 | MS.gene38655:intron | 40.0% | |
| CGGAGAATGAAGAAGTTGAA+GGG | + | chr6.2:55718167-55718186 | None:intergenic | 40.0% | |
| CTGAAAATGTACATCCAGAG+TGG | + | chr6.2:55720172-55720191 | None:intergenic | 40.0% | |
| GAAAGCAGACTGAATCTTCA+CGG | + | chr6.2:55718385-55718404 | None:intergenic | 40.0% | |
| GAATCCAATCCCAATGTAAG+TGG | - | chr6.2:55721359-55721378 | MS.gene38655:intron | 40.0% | |
| GCTAAGACGAATGCAAACAT+TGG | - | chr6.2:55722288-55722307 | MS.gene38655:intron | 40.0% | |
| GGACAAGTATTATGAAACGG+AGG | - | chr6.2:55719629-55719648 | MS.gene38655:intron | 40.0% | |
| GGTCATTGACCTATGTTAGA+AGG | - | chr6.2:55720086-55720105 | MS.gene38655:CDS | 40.0% | |
| GTGACCACACAAACATTACT+CGG | + | chr6.2:55718982-55719001 | None:intergenic | 40.0% | |
| GTTGGATGGAAGAAAACACA+TGG | - | chr6.2:55723685-55723704 | MS.gene38655:intron | 40.0% | |
| TACACCACTTACATTGGGAT+TGG | + | chr6.2:55721366-55721385 | None:intergenic | 40.0% | |
| TAGGTCTATTCAAGGCCTTT+GGG | - | chr6.2:55724199-55724218 | MS.gene38655:CDS | 40.0% | |
| TATGAATTTGGAAGGCAAGG+AGG | - | chr6.2:55722185-55722204 | MS.gene38655:intron | 40.0% | |
| TCGGAGAATGAAGAAGTTGA+AGG | + | chr6.2:55718168-55718187 | None:intergenic | 40.0% | |
| TCTGGAGGAGAGAAATATGA+TGG | + | chr6.2:55720206-55720225 | None:intergenic | 40.0% | |
| TGCACTTACAACGGTAAATG+AGG | + | chr6.2:55721210-55721229 | None:intergenic | 40.0% | |
| TGTCAATCTAACAACCTCAG+CGG | + | chr6.2:55718277-55718296 | None:intergenic | 40.0% | |
| TGTGTGAGAGTGAGAATAGA+AGG | - | chr6.2:55720446-55720465 | MS.gene38655:intron | 40.0% | |
| ! | ACAAGTCACAGCAATGGATT+TGG | + | chr6.2:55721779-55721798 | None:intergenic | 40.0% |
| ! | GTAGTGGTTTAAAAGTGTGC+TGG | + | chr6.2:55721932-55721951 | None:intergenic | 40.0% |
| ! | TCAAACTCTAGCCTTTGTCT+TGG | + | chr6.2:55724161-55724180 | None:intergenic | 40.0% |
| ! | TCTAAAACCACACTTTGTGG+GGG | - | chr6.2:55720967-55720986 | MS.gene38655:intron | 40.0% |
| !! | AATCTTCTAGGGCTAAGGTT+AGG | - | chr6.2:55724123-55724142 | MS.gene38655:CDS | 40.0% |
| !! | CGGCTAAAATCGGTTTTCAT+CGG | + | chr6.2:55720240-55720259 | None:intergenic | 40.0% |
| !! | CTCTAAAACCACACTTTGTG+GGG | - | chr6.2:55720966-55720985 | MS.gene38655:intron | 40.0% |
| !! | GGTAACTTGTTGGAAAAGCT+AGG | - | chr6.2:55722724-55722743 | MS.gene38655:intron | 40.0% |
| !! | TACTCAATCTTCTAGGGCTA+AGG | - | chr6.2:55724118-55724137 | MS.gene38655:CDS | 40.0% |
| !!! | GGACATGTATTTTGAAACGG+AGG | + | chr6.2:55719388-55719407 | None:intergenic | 40.0% |
| !!! | TCTTTTTTGTTGTTGGTGGG+TGG | + | chr6.2:55718084-55718103 | None:intergenic | 40.0% |
| !!! | TTTTTTACCCCCACAAAGTG+TGG | + | chr6.2:55720977-55720996 | None:intergenic | 40.0% |
| AACTTAGAAAGAGCCCGGTT+AGG | - | chr6.2:55723645-55723664 | MS.gene38655:intron | 45.0% | |
| AAGATTCAGTCTGCTTTCCG+AGG | - | chr6.2:55718387-55718406 | MS.gene38655:CDS | 45.0% | |
| AATGTACATCCAGAGTGGGT+TGG | + | chr6.2:55720167-55720186 | None:intergenic | 45.0% | |
| AATTTGGTCCCTCGAACTGT+AGG | + | chr6.2:55723210-55723229 | None:intergenic | 45.0% | |
| ACAATGTTACTAGACCTGCG+TGG | - | chr6.2:55720357-55720376 | MS.gene38655:intron | 45.0% | |
| AGCAAGTCGTGTGCACATTT+CGG | - | chr6.2:55722333-55722352 | MS.gene38655:intron | 45.0% | |
| CATATTTCTCTCCTCCAGAG+TGG | - | chr6.2:55720207-55720226 | MS.gene38655:intron | 45.0% | |
| CATTTGAGCTACATCTCTGC+AGG | + | chr6.2:55723608-55723627 | None:intergenic | 45.0% | |
| CTAGGTCTATTCAAGGCCTT+TGG | - | chr6.2:55724198-55724217 | MS.gene38655:CDS | 45.0% | |
| GAAAACACATGGAGCCAAAC+CGG | - | chr6.2:55723696-55723715 | MS.gene38655:intron | 45.0% | |
| GCTTCTTCAAGACTCGAAAG+TGG | - | chr6.2:55724005-55724024 | MS.gene38655:CDS | 45.0% | |
| GTCTGCTTTCCGAGGTTATT+TGG | - | chr6.2:55718395-55718414 | MS.gene38655:CDS | 45.0% | |
| TCGTACTATAGACGCGAAGT+GGG | + | chr6.2:55723374-55723393 | None:intergenic | 45.0% | |
| TGCAAGAATTGGTAGGGTGA+TGG | + | chr6.2:55722846-55722865 | None:intergenic | 45.0% | |
| TTCGTACTATAGACGCGAAG+TGG | + | chr6.2:55723375-55723394 | None:intergenic | 45.0% | |
| TTGACAACTCTGATTCCGTC+CGG | + | chr6.2:55720278-55720297 | None:intergenic | 45.0% | |
| TTGACAAGTAATACGGCTGG+AGG | - | chr6.2:55718291-55718310 | MS.gene38655:CDS | 45.0% | |
| ! | AAATGCCTGTGGACTACTCT+CGG | + | chr6.2:55723982-55724001 | None:intergenic | 45.0% |
| ! | ATACCTTTCTGGTCCCAGAT+TGG | + | chr6.2:55720580-55720599 | None:intergenic | 45.0% |
| ! | ATGATGATGCCTACAGTTCG+AGG | - | chr6.2:55723198-55723217 | MS.gene38655:intron | 45.0% |
| ! | ATGTACATCCAGAGTGGGTT+GGG | + | chr6.2:55720166-55720185 | None:intergenic | 45.0% |
| ! | ATTCAAGGCCTTTGGGAATC+AGG | - | chr6.2:55724206-55724225 | MS.gene38655:CDS | 45.0% |
| ! | CACAAAGTGCTCCAAGACAA+AGG | - | chr6.2:55724147-55724166 | MS.gene38655:CDS | 45.0% |
| ! | GAGTAGTCCACAGGCATTTT+CGG | - | chr6.2:55723983-55724002 | MS.gene38655:CDS | 45.0% |
| ! | TCTAAAATCCCAACCCACTC+TGG | - | chr6.2:55720155-55720174 | MS.gene38655:intron | 45.0% |
| ! | TGATGATGCCTACAGTTCGA+GGG | - | chr6.2:55723199-55723218 | MS.gene38655:intron | 45.0% |
| ! | TGATGGATCTTCCATCCTCA+AGG | - | chr6.2:55723398-55723417 | MS.gene38655:intron | 45.0% |
| ! | TTCAAGGCCTTTGGGAATCA+GGG | - | chr6.2:55724207-55724226 | MS.gene38655:CDS | 45.0% |
| ! | TTTCCAATCTGGGACCAGAA+AGG | - | chr6.2:55720574-55720593 | MS.gene38655:intron | 45.0% |
| !! | GCTTTAGAAGAGCGTTTCGA+CGG | + | chr6.2:55723888-55723907 | None:intergenic | 45.0% |
| AACTTTCTCCGGCGACTCTT+CGG | - | chr6.2:55718027-55718046 | MS.gene38655:CDS | 50.0% | |
| AATTGCAGCCAGCACGTGAT+AGG | + | chr6.2:55719735-55719754 | None:intergenic | 50.0% | |
| AGCACGTGATAGGAATACCG+AGG | + | chr6.2:55719725-55719744 | None:intergenic | 50.0% | |
| CAAGACTCGAAAGTGGTTCG+AGG | - | chr6.2:55724012-55724031 | MS.gene38655:CDS | 50.0% | |
| GAAGAAGCCGAAAATGCCTG+TGG | + | chr6.2:55723993-55724012 | None:intergenic | 50.0% | |
| GAGCCCGGTTAGGTTCAAAT+TGG | - | chr6.2:55723655-55723674 | MS.gene38655:intron | 50.0% | |
| GCACGTGATAGGAATACCGA+GGG | + | chr6.2:55719724-55719743 | None:intergenic | 50.0% | |
| GGACACACGAGCCTTTAGTT+AGG | - | chr6.2:55721067-55721086 | MS.gene38655:intron | 50.0% | |
| GTTACTAGACCTGCGTGGTA+GGG | - | chr6.2:55720362-55720381 | MS.gene38655:intron | 50.0% | |
| TCGGTATTCCTATCACGTGC+TGG | - | chr6.2:55719724-55719743 | MS.gene38655:intron | 50.0% | |
| TGTTACTAGACCTGCGTGGT+AGG | - | chr6.2:55720361-55720380 | MS.gene38655:intron | 50.0% | |
| ! | TTGTTGTTGGTGGGTGGTTC+TGG | + | chr6.2:55718078-55718097 | None:intergenic | 50.0% |
| !! | GTGGTTCTGGTGGTGGATTA+CGG | + | chr6.2:55718065-55718084 | None:intergenic | 50.0% |
| !!! | ATTTTTCGATGAAGCGCCGC+CGG | + | chr6.2:55723718-55723737 | None:intergenic | 50.0% |
| AACACATGGAGCCAAACCGG+CGG | - | chr6.2:55723699-55723718 | MS.gene38655:intron | 55.0% | |
| ACGGCTGGAGGAAATTCTGC+TGG | - | chr6.2:55718303-55718322 | MS.gene38655:CDS | 55.0% | |
| AGCGAGTGCAGCTTCAGCAA+CGG | + | chr6.2:55718241-55718260 | None:intergenic | 55.0% | |
| CGGCTGGAGGAAATTCTGCT+GGG | - | chr6.2:55718304-55718323 | MS.gene38655:CDS | 55.0% | |
| CTCACATTACCCTACCACGC+AGG | + | chr6.2:55720374-55720393 | None:intergenic | 55.0% | |
| CTCGAACTCCAACGACTGGT+CGG | - | chr6.2:55718331-55718350 | MS.gene38655:CDS | 55.0% | |
| CTGCTCAAGCTACTTGTGGC+TGG | + | chr6.2:55724275-55724294 | None:intergenic | 55.0% | |
| GCTATGGTAGTCAGTGCCCT+CGG | - | chr6.2:55719705-55719724 | MS.gene38655:intron | 55.0% | |
| GCTGGAGGAAATTCTGCTGG+GGG | - | chr6.2:55718306-55718325 | MS.gene38655:CDS | 55.0% | |
| GGCTGGAGGAAATTCTGCTG+GGG | - | chr6.2:55718305-55718324 | MS.gene38655:CDS | 55.0% | |
| TCATCGGATGCTCTCCACTC+TGG | + | chr6.2:55720224-55720243 | None:intergenic | 55.0% | |
| !! | TTGTTGGTGGGTGGTTCTGG+TGG | + | chr6.2:55718075-55718094 | None:intergenic | 55.0% |
| AACCGCCGAGAGTAGTCCAC+AGG | - | chr6.2:55723974-55723993 | MS.gene38655:CDS | 60.0% | |
| AACCGTCTCCGACCAGTCGT+TGG | + | chr6.2:55718342-55718361 | None:intergenic | 60.0% | |
| CGACCAGTCGTTGGAGTTCG+AGG | + | chr6.2:55718333-55718352 | None:intergenic | 60.0% | |
| CTCGAAAGTGGTTCGAGGCG+AGG | - | chr6.2:55724017-55724036 | MS.gene38655:CDS | 60.0% | |
| GAGTGCAGCTTCAGCAACGG+CGG | + | chr6.2:55718238-55718257 | None:intergenic | 60.0% | |
| GGACCTCGAACTCCAACGAC+TGG | - | chr6.2:55718327-55718346 | MS.gene38655:CDS | 60.0% | |
| TCGGATGCTCTCCACTCTGG+AGG | + | chr6.2:55720221-55720240 | None:intergenic | 60.0% | |
| TGGACTACTCTCGGCGGTTC+GGG | + | chr6.2:55723973-55723992 | None:intergenic | 60.0% | |
| TTTCTCCGGCGACTCTTCGG+CGG | - | chr6.2:55718030-55718049 | MS.gene38655:CDS | 60.0% | |
| ! | CTCCAACGACTGGTCGGAGA+CGG | - | chr6.2:55718337-55718356 | MS.gene38655:CDS | 60.0% |
| ! | GACTGGTCGGAGACGGTTGT+CGG | - | chr6.2:55718344-55718363 | MS.gene38655:CDS | 60.0% |
| ! | GTGGACTACTCTCGGCGGTT+CGG | + | chr6.2:55723974-55723993 | None:intergenic | 60.0% |
| ! | TGCCTGTGGACTACTCTCGG+CGG | + | chr6.2:55723979-55723998 | None:intergenic | 60.0% |
| ! | TTTTGCCGCCGAAGAGTCGC+CGG | + | chr6.2:55718038-55718057 | None:intergenic | 60.0% |
| !! | TTGGTGGGTGGTTCTGGTGG+TGG | + | chr6.2:55718072-55718091 | None:intergenic | 60.0% |
| TGCTGCTCATGCTGCCGCTG+AGG | - | chr6.2:55718260-55718279 | MS.gene38655:CDS | 65.0% | |
| TGGTCGGAGACGGTTGTCGG+AGG | - | chr6.2:55718347-55718366 | MS.gene38655:CDS | 65.0% | |
| !! | TCGATGAAGCGCCGCCGGTT+TGG | + | chr6.2:55723713-55723732 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 55718024 | 55724322 | 55718024 | ID=MS.gene38655 |
| chr6.2 | mRNA | 55718024 | 55724322 | 55718024 | ID=MS.gene38655.t1;Parent=MS.gene38655 |
| chr6.2 | exon | 55723930 | 55724322 | 55723930 | ID=MS.gene38655.t1.exon1;Parent=MS.gene38655.t1 |
| chr6.2 | CDS | 55723930 | 55724322 | 55723930 | ID=cds.MS.gene38655.t1;Parent=MS.gene38655.t1 |
| chr6.2 | exon | 55719950 | 55720147 | 55719950 | ID=MS.gene38655.t1.exon2;Parent=MS.gene38655.t1 |
| chr6.2 | CDS | 55719950 | 55720147 | 55719950 | ID=cds.MS.gene38655.t1;Parent=MS.gene38655.t1 |
| chr6.2 | exon | 55718927 | 55718995 | 55718927 | ID=MS.gene38655.t1.exon3;Parent=MS.gene38655.t1 |
| chr6.2 | CDS | 55718927 | 55718995 | 55718927 | ID=cds.MS.gene38655.t1;Parent=MS.gene38655.t1 |
| chr6.2 | exon | 55718024 | 55718734 | 55718024 | ID=MS.gene38655.t1.exon4;Parent=MS.gene38655.t1 |
| chr6.2 | CDS | 55718024 | 55718734 | 55718024 | ID=cds.MS.gene38655.t1;Parent=MS.gene38655.t1 |
| Gene Sequence |
| Protein sequence |
