Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46024.t1 | XP_013449039.1 | 98.4 | 491 | 8 | 0 | 3 | 493 | 81 | 571 | 1.50E-295 | 1024.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46024.t1 | Q9LFD1 | 53.9 | 497 | 211 | 7 | 3 | 493 | 84 | 568 | 1.6e-157 | 557.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46024.t1 | A0A072U0V9 | 98.4 | 491 | 8 | 0 | 3 | 493 | 81 | 571 | 1.1e-295 | 1024.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049147 | MS.gene46024 | 0.813446 | 2.55E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene46024 | 0.837962 | 3.81E-57 | -1.69E-46 |
| MS.gene049634 | MS.gene46024 | 0.849951 | 2.32E-60 | -1.69E-46 |
| MS.gene050095 | MS.gene46024 | 0.824119 | 9.59E-54 | -1.69E-46 |
| MS.gene050216 | MS.gene46024 | -0.810969 | 8.85E-51 | -1.69E-46 |
| MS.gene050380 | MS.gene46024 | 0.848882 | 4.62E-60 | -1.69E-46 |
| MS.gene050381 | MS.gene46024 | 0.870628 | 1.26E-66 | -1.69E-46 |
| MS.gene05079 | MS.gene46024 | 0.816892 | 4.37E-52 | -1.69E-46 |
| MS.gene050809 | MS.gene46024 | 0.83912 | 1.92E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene46024 | -0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene46024 | -0.808817 | 2.57E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene46024 | 0.840883 | 6.65E-58 | -1.69E-46 |
| MS.gene051127 | MS.gene46024 | 0.834702 | 2.57E-56 | -1.69E-46 |
| MS.gene051138 | MS.gene46024 | 0.821281 | 4.39E-53 | -1.69E-46 |
| MS.gene051385 | MS.gene46024 | 0.81648 | 5.41E-52 | -1.69E-46 |
| MS.gene051632 | MS.gene46024 | 0.814983 | 1.17E-51 | -1.69E-46 |
| MS.gene051863 | MS.gene46024 | 0.82364 | 1.24E-53 | -1.69E-46 |
| MS.gene053406 | MS.gene46024 | 0.813114 | 3.01E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene46024 | 0.844432 | 7.59E-59 | -1.69E-46 |
| MS.gene053488 | MS.gene46024 | 0.830395 | 3.01E-55 | -1.69E-46 |
| MS.gene053561 | MS.gene46024 | 0.839937 | 1.17E-57 | -1.69E-46 |
| MS.gene054290 | MS.gene46024 | 0.81587 | 7.41E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene46024 | 0.806464 | 8.12E-50 | -1.69E-46 |
| MS.gene054707 | MS.gene46024 | 0.806163 | 9.40E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene46024 | 0.825911 | 3.62E-54 | -1.69E-46 |
| MS.gene054742 | MS.gene46024 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene46024 | 0.9157 | 4.31E-85 | -1.69E-46 |
| MS.gene055154 | MS.gene46024 | 0.85568 | 5.36E-62 | -1.69E-46 |
| MS.gene055202 | MS.gene46024 | 0.829686 | 4.48E-55 | -1.69E-46 |
| MS.gene055959 | MS.gene46024 | 0.849737 | 2.67E-60 | -1.69E-46 |
| MS.gene056313 | MS.gene46024 | 0.833089 | 6.52E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene46024 | -0.800538 | 1.38E-48 | -1.69E-46 |
| MS.gene058093 | MS.gene46024 | 0.885527 | 7.53E-72 | -1.69E-46 |
| MS.gene058099 | MS.gene46024 | 0.85478 | 9.80E-62 | -1.69E-46 |
| MS.gene058108 | MS.gene46024 | 0.840228 | 9.87E-58 | -1.69E-46 |
| MS.gene058109 | MS.gene46024 | 0.834918 | 2.27E-56 | -1.69E-46 |
| MS.gene058117 | MS.gene46024 | 0.809837 | 1.55E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene46024 | 0.860535 | 1.93E-63 | -1.69E-46 |
| MS.gene058173 | MS.gene46024 | 0.853678 | 2.04E-61 | -1.69E-46 |
| MS.gene058175 | MS.gene46024 | 0.86084 | 1.56E-63 | -1.69E-46 |
| MS.gene058176 | MS.gene46024 | 0.84169 | 4.08E-58 | -1.69E-46 |
| MS.gene058179 | MS.gene46024 | 0.86145 | 1.02E-63 | -1.69E-46 |
| MS.gene058180 | MS.gene46024 | 0.845302 | 4.42E-59 | -1.69E-46 |
| MS.gene058840 | MS.gene46024 | 0.885986 | 5.06E-72 | -1.69E-46 |
| MS.gene059037 | MS.gene46024 | 0.862647 | 4.37E-64 | -1.69E-46 |
| MS.gene059038 | MS.gene46024 | 0.837159 | 6.13E-57 | -1.69E-46 |
| MS.gene059044 | MS.gene46024 | 0.830982 | 2.16E-55 | -1.69E-46 |
| MS.gene059045 | MS.gene46024 | 0.84901 | 4.26E-60 | -1.69E-46 |
| MS.gene059682 | MS.gene46024 | 0.835398 | 1.72E-56 | -1.69E-46 |
| MS.gene059690 | MS.gene46024 | 0.816966 | 4.21E-52 | -1.69E-46 |
| MS.gene059691 | MS.gene46024 | 0.826068 | 3.32E-54 | -1.69E-46 |
| MS.gene059694 | MS.gene46024 | 0.831877 | 1.30E-55 | -1.69E-46 |
| MS.gene059697 | MS.gene46024 | 0.83498 | 2.19E-56 | -1.69E-46 |
| MS.gene059916 | MS.gene46024 | 0.800283 | 1.55E-48 | -1.69E-46 |
| MS.gene059943 | MS.gene46024 | 0.80846 | 3.06E-50 | -1.69E-46 |
| MS.gene059944 | MS.gene46024 | 0.838602 | 2.61E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene46024 | -0.810936 | 8.99E-51 | -1.69E-46 |
| MS.gene06074 | MS.gene46024 | 0.83254 | 8.92E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46024.t1 | MTR_7g065980 | 98.371 | 491 | 8 | 0 | 3 | 493 | 81 | 571 | 0.0 | 1005 |
| MS.gene46024.t1 | MTR_7g065970 | 65.524 | 496 | 160 | 5 | 3 | 493 | 81 | 570 | 0.0 | 636 |
| MS.gene46024.t1 | MTR_4g019225 | 55.422 | 498 | 208 | 9 | 3 | 493 | 82 | 572 | 0.0 | 577 |
| MS.gene46024.t1 | MTR_5g083360 | 45.817 | 502 | 247 | 9 | 3 | 493 | 80 | 567 | 2.28e-159 | 464 |
| MS.gene46024.t1 | MTR_5g073210 | 46.278 | 497 | 244 | 9 | 3 | 493 | 81 | 560 | 1.54e-157 | 459 |
| MS.gene46024.t1 | MTR_7g062250 | 45.691 | 499 | 253 | 9 | 3 | 493 | 90 | 578 | 6.90e-153 | 448 |
| MS.gene46024.t1 | MTR_5g069680 | 45.639 | 493 | 249 | 8 | 3 | 493 | 83 | 558 | 2.05e-152 | 446 |
| MS.gene46024.t1 | MTR_5g020620 | 46.263 | 495 | 243 | 11 | 3 | 493 | 86 | 561 | 2.09e-152 | 446 |
| MS.gene46024.t1 | MTR_2g008330 | 45.363 | 496 | 256 | 7 | 3 | 493 | 94 | 579 | 5.89e-151 | 443 |
| MS.gene46024.t1 | MTR_7g058690 | 45.509 | 501 | 254 | 9 | 3 | 493 | 89 | 580 | 9.09e-151 | 442 |
| MS.gene46024.t1 | MTR_4g015120 | 44.625 | 493 | 256 | 8 | 3 | 493 | 80 | 557 | 9.76e-151 | 442 |
| MS.gene46024.t1 | MTR_7g060460 | 45.418 | 502 | 254 | 9 | 3 | 493 | 89 | 581 | 2.33e-150 | 442 |
| MS.gene46024.t1 | MTR_7g458880 | 44.511 | 501 | 259 | 9 | 3 | 493 | 89 | 580 | 1.18e-149 | 440 |
| MS.gene46024.t1 | MTR_3g101635 | 48.041 | 485 | 237 | 8 | 3 | 483 | 83 | 556 | 3.80e-149 | 438 |
| MS.gene46024.t1 | MTR_3g101640 | 47.800 | 500 | 238 | 13 | 3 | 493 | 86 | 571 | 6.70e-148 | 435 |
| MS.gene46024.t1 | MTR_7g062310 | 43.600 | 500 | 264 | 8 | 3 | 493 | 103 | 593 | 1.03e-147 | 435 |
| MS.gene46024.t1 | MTR_3g462760 | 44.219 | 493 | 255 | 10 | 3 | 493 | 82 | 556 | 1.32e-145 | 429 |
| MS.gene46024.t1 | MTR_5g081810 | 45.253 | 495 | 247 | 11 | 3 | 493 | 55 | 529 | 4.59e-145 | 426 |
| MS.gene46024.t1 | MTR_4g064530 | 45.851 | 482 | 246 | 8 | 3 | 479 | 100 | 571 | 2.05e-144 | 426 |
| MS.gene46024.t1 | MTR_5g020600 | 44.153 | 496 | 253 | 11 | 3 | 493 | 90 | 566 | 6.32e-143 | 422 |
| MS.gene46024.t1 | MTR_3g071890 | 46.593 | 455 | 218 | 11 | 3 | 449 | 89 | 526 | 4.32e-139 | 412 |
| MS.gene46024.t1 | MTR_4g064530 | 45.098 | 459 | 235 | 9 | 3 | 454 | 100 | 548 | 9.89e-132 | 393 |
| MS.gene46024.t1 | MTR_8g027375 | 40.927 | 496 | 274 | 8 | 3 | 493 | 90 | 571 | 8.40e-128 | 384 |
| MS.gene46024.t1 | MTR_8g091390 | 29.070 | 516 | 292 | 16 | 3 | 484 | 91 | 566 | 1.37e-52 | 187 |
| MS.gene46024.t1 | MTR_5g081790 | 38.462 | 273 | 151 | 7 | 179 | 451 | 165 | 420 | 1.37e-51 | 181 |
| MS.gene46024.t1 | MTR_5g081790 | 55.422 | 83 | 36 | 1 | 4 | 85 | 88 | 170 | 4.26e-24 | 104 |
| MS.gene46024.t1 | MTR_3g078700 | 28.810 | 479 | 288 | 13 | 3 | 471 | 83 | 518 | 7.92e-43 | 159 |
| MS.gene46024.t1 | MTR_3g078740 | 28.682 | 516 | 290 | 22 | 3 | 471 | 83 | 567 | 6.70e-42 | 158 |
| MS.gene46024.t1 | MTR_1g090707 | 27.397 | 511 | 297 | 18 | 3 | 493 | 80 | 536 | 7.86e-39 | 149 |
| MS.gene46024.t1 | MTR_1g026410 | 29.718 | 461 | 271 | 20 | 3 | 458 | 85 | 497 | 3.55e-35 | 138 |
| MS.gene46024.t1 | MTR_3g115050 | 29.310 | 464 | 269 | 20 | 3 | 458 | 86 | 498 | 4.15e-35 | 138 |
| MS.gene46024.t1 | MTR_3g078730 | 26.042 | 480 | 300 | 12 | 3 | 471 | 82 | 517 | 9.02e-35 | 137 |
| MS.gene46024.t1 | MTR_4g101650 | 28.231 | 503 | 313 | 19 | 3 | 493 | 83 | 549 | 4.22e-33 | 132 |
| MS.gene46024.t1 | MTR_3g083430 | 26.708 | 483 | 298 | 17 | 3 | 475 | 81 | 517 | 5.78e-33 | 132 |
| MS.gene46024.t1 | MTR_4g049390 | 27.033 | 455 | 281 | 17 | 3 | 453 | 83 | 490 | 1.56e-32 | 130 |
| MS.gene46024.t1 | MTR_3g083450 | 26.708 | 483 | 298 | 18 | 3 | 475 | 82 | 518 | 2.80e-32 | 130 |
| MS.gene46024.t1 | MTR_8g479390 | 26.652 | 469 | 294 | 14 | 1 | 466 | 85 | 506 | 3.91e-32 | 129 |
| MS.gene46024.t1 | MTR_3g083400 | 26.501 | 483 | 299 | 17 | 3 | 475 | 81 | 517 | 4.79e-32 | 129 |
| MS.gene46024.t1 | MTR_3g083440 | 26.294 | 483 | 300 | 17 | 3 | 475 | 81 | 517 | 1.10e-31 | 128 |
| MS.gene46024.t1 | MTR_8g479380 | 26.569 | 478 | 283 | 18 | 1 | 466 | 83 | 504 | 2.02e-31 | 127 |
| MS.gene46024.t1 | MTR_4g083210 | 27.389 | 471 | 288 | 18 | 3 | 466 | 81 | 504 | 2.30e-31 | 127 |
| MS.gene46024.t1 | MTR_3g083390 | 26.294 | 483 | 300 | 17 | 3 | 475 | 81 | 517 | 3.13e-31 | 127 |
| MS.gene46024.t1 | MTR_4g083190 | 27.345 | 501 | 285 | 23 | 3 | 483 | 83 | 524 | 3.57e-31 | 127 |
| MS.gene46024.t1 | MTR_3g083410 | 26.294 | 483 | 300 | 17 | 3 | 475 | 45 | 481 | 5.78e-31 | 125 |
| MS.gene46024.t1 | MTR_5g018270 | 25.786 | 477 | 285 | 16 | 1 | 466 | 85 | 503 | 1.16e-30 | 125 |
| MS.gene46024.t1 | MTR_4g075690 | 27.571 | 457 | 279 | 19 | 1 | 453 | 84 | 492 | 2.73e-30 | 124 |
| MS.gene46024.t1 | MTR_4g048350 | 26.154 | 455 | 284 | 18 | 3 | 453 | 83 | 489 | 1.04e-29 | 122 |
| MS.gene46024.t1 | MTR_7g051440 | 27.101 | 476 | 297 | 16 | 3 | 467 | 85 | 521 | 5.77e-29 | 120 |
| MS.gene46024.t1 | MTR_2g088080 | 26.293 | 464 | 273 | 16 | 3 | 453 | 86 | 493 | 1.99e-28 | 119 |
| MS.gene46024.t1 | MTR_2g088080 | 26.134 | 463 | 273 | 16 | 4 | 453 | 6 | 412 | 3.05e-27 | 114 |
| MS.gene46024.t1 | MTR_3g008580 | 26.482 | 506 | 322 | 18 | 1 | 493 | 83 | 551 | 2.33e-26 | 112 |
| MS.gene46024.t1 | MTR_4g132320 | 26.552 | 467 | 268 | 19 | 3 | 453 | 87 | 494 | 1.62e-25 | 110 |
| MS.gene46024.t1 | MTR_4g075690 | 26.764 | 411 | 250 | 18 | 1 | 407 | 84 | 447 | 7.05e-22 | 98.6 |
| MS.gene46024.t1 | MTR_7g058670 | 48.148 | 81 | 40 | 2 | 4 | 82 | 13 | 93 | 6.51e-20 | 85.1 |
| MS.gene46024.t1 | MTR_8g073840 | 47.170 | 106 | 45 | 4 | 23 | 126 | 78 | 174 | 4.59e-18 | 85.1 |
| MS.gene46024.t1 | MTR_6g055200 | 63.043 | 46 | 16 | 1 | 401 | 446 | 1 | 45 | 3.73e-13 | 64.3 |
| MS.gene46024.t1 | MTR_4g133150 | 32.847 | 137 | 78 | 4 | 71 | 204 | 44 | 169 | 1.74e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46024.t1 | AT5G01050 | 53.924 | 497 | 211 | 7 | 3 | 493 | 84 | 568 | 0.0 | 544 |
| MS.gene46024.t1 | AT5G01040 | 52.834 | 494 | 219 | 5 | 3 | 493 | 84 | 566 | 0.0 | 542 |
| MS.gene46024.t1 | AT3G09220 | 54.167 | 480 | 203 | 9 | 3 | 476 | 82 | 550 | 0.0 | 521 |
| MS.gene46024.t1 | AT3G09220 | 54.428 | 463 | 194 | 9 | 20 | 476 | 2 | 453 | 1.57e-173 | 496 |
| MS.gene46024.t1 | AT2G30210 | 45.635 | 504 | 244 | 11 | 3 | 493 | 84 | 570 | 3.45e-158 | 461 |
| MS.gene46024.t1 | AT5G05390 | 46.479 | 497 | 246 | 10 | 3 | 493 | 83 | 565 | 4.11e-158 | 461 |
| MS.gene46024.t1 | AT2G40370 | 44.466 | 506 | 256 | 9 | 3 | 493 | 85 | 580 | 9.63e-158 | 461 |
| MS.gene46024.t1 | AT2G29130 | 45.674 | 497 | 255 | 9 | 3 | 493 | 86 | 573 | 2.34e-152 | 446 |
| MS.gene46024.t1 | AT5G07130 | 44.930 | 503 | 252 | 12 | 3 | 493 | 80 | 569 | 1.22e-150 | 442 |
| MS.gene46024.t1 | AT5G60020 | 45.257 | 506 | 253 | 10 | 3 | 493 | 49 | 545 | 1.38e-148 | 436 |
| MS.gene46024.t1 | AT5G60020 | 45.257 | 506 | 253 | 10 | 3 | 493 | 81 | 577 | 2.12e-148 | 436 |
| MS.gene46024.t1 | AT2G38080 | 44.422 | 493 | 255 | 10 | 3 | 493 | 83 | 558 | 1.73e-147 | 434 |
| MS.gene46024.t1 | AT5G01190 | 45.030 | 493 | 254 | 7 | 3 | 493 | 81 | 558 | 2.85e-147 | 433 |
| MS.gene46024.t1 | AT5G01190 | 45.030 | 493 | 254 | 7 | 3 | 493 | 67 | 544 | 2.87e-147 | 432 |
| MS.gene46024.t1 | AT5G07130 | 44.668 | 497 | 250 | 12 | 9 | 493 | 1 | 484 | 2.99e-147 | 430 |
| MS.gene46024.t1 | AT5G07130 | 44.668 | 497 | 250 | 12 | 9 | 493 | 1 | 484 | 2.99e-147 | 430 |
| MS.gene46024.t1 | AT5G58910 | 44.625 | 493 | 260 | 8 | 3 | 493 | 86 | 567 | 2.74e-145 | 428 |
| MS.gene46024.t1 | AT5G58910 | 44.625 | 493 | 260 | 8 | 3 | 493 | 85 | 566 | 3.48e-145 | 428 |
| MS.gene46024.t1 | AT5G03260 | 45.951 | 494 | 246 | 12 | 3 | 493 | 82 | 557 | 5.85e-145 | 427 |
| MS.gene46024.t1 | AT1G18140 | 44.576 | 507 | 255 | 12 | 3 | 493 | 85 | 581 | 5.82e-143 | 423 |
| MS.gene46024.t1 | AT5G58910 | 44.239 | 486 | 258 | 8 | 10 | 493 | 49 | 523 | 1.94e-141 | 417 |
| MS.gene46024.t1 | AT5G09360 | 42.222 | 495 | 265 | 9 | 3 | 493 | 92 | 569 | 8.45e-141 | 417 |
| MS.gene46024.t1 | AT5G48100 | 44.512 | 492 | 250 | 12 | 1 | 483 | 76 | 553 | 2.99e-137 | 407 |
| MS.gene46024.t1 | AT2G46570 | 43.750 | 496 | 260 | 9 | 3 | 493 | 88 | 569 | 1.21e-134 | 401 |
| MS.gene46024.t1 | AT2G46570 | 43.574 | 498 | 262 | 9 | 1 | 493 | 1 | 484 | 4.09e-134 | 397 |
| MS.gene46024.t1 | AT5G60020 | 44.181 | 464 | 235 | 10 | 3 | 451 | 81 | 535 | 2.53e-127 | 382 |
| MS.gene46024.t1 | AT5G21105 | 29.845 | 516 | 292 | 18 | 3 | 484 | 95 | 574 | 3.72e-51 | 183 |
| MS.gene46024.t1 | AT4G39830 | 29.081 | 533 | 288 | 19 | 3 | 493 | 93 | 577 | 4.45e-51 | 183 |
| MS.gene46024.t1 | AT4G39830 | 28.868 | 530 | 287 | 19 | 6 | 493 | 1 | 482 | 2.59e-49 | 176 |
| MS.gene46024.t1 | AT4G39830 | 28.872 | 523 | 282 | 19 | 13 | 493 | 6 | 480 | 1.12e-47 | 172 |
| MS.gene46024.t1 | AT5G21100 | 27.888 | 502 | 290 | 18 | 3 | 472 | 81 | 542 | 3.54e-47 | 172 |
| MS.gene46024.t1 | AT4G39830 | 28.355 | 529 | 278 | 18 | 6 | 493 | 1 | 469 | 2.70e-46 | 168 |
| MS.gene46024.t1 | AT5G21105 | 29.375 | 480 | 272 | 17 | 3 | 451 | 95 | 538 | 5.38e-43 | 160 |
| MS.gene46024.t1 | AT4G37160 | 27.218 | 496 | 312 | 15 | 1 | 493 | 85 | 534 | 8.50e-38 | 145 |
| MS.gene46024.t1 | AT1G76160 | 27.778 | 486 | 298 | 17 | 1 | 483 | 82 | 517 | 5.01e-36 | 140 |
| MS.gene46024.t1 | AT2G23630 | 26.411 | 496 | 315 | 17 | 1 | 493 | 84 | 532 | 1.29e-35 | 139 |
| MS.gene46024.t1 | AT2G23630 | 26.411 | 496 | 315 | 17 | 1 | 493 | 89 | 537 | 1.60e-35 | 139 |
| MS.gene46024.t1 | AT1G41830 | 28.139 | 462 | 276 | 18 | 3 | 458 | 85 | 496 | 2.43e-35 | 139 |
| MS.gene46024.t1 | AT5G51480 | 27.593 | 511 | 310 | 18 | 1 | 493 | 82 | 550 | 1.80e-34 | 137 |
| MS.gene46024.t1 | AT5G21105 | 30.769 | 364 | 212 | 12 | 130 | 484 | 51 | 383 | 2.68e-34 | 133 |
| MS.gene46024.t1 | AT1G21850 | 28.056 | 499 | 275 | 19 | 3 | 483 | 85 | 517 | 1.50e-33 | 134 |
| MS.gene46024.t1 | AT1G21860 | 26.625 | 477 | 283 | 20 | 1 | 466 | 83 | 503 | 3.32e-33 | 132 |
| MS.gene46024.t1 | AT5G48450 | 26.947 | 475 | 295 | 18 | 1 | 467 | 83 | 513 | 7.68e-33 | 132 |
| MS.gene46024.t1 | AT4G25240 | 27.273 | 506 | 317 | 17 | 1 | 493 | 83 | 550 | 1.29e-32 | 131 |
| MS.gene46024.t1 | AT4G25240 | 27.273 | 506 | 317 | 17 | 1 | 493 | 83 | 550 | 1.29e-32 | 131 |
| MS.gene46024.t1 | AT5G48450 | 26.947 | 475 | 295 | 18 | 1 | 467 | 83 | 513 | 1.68e-32 | 131 |
| MS.gene46024.t1 | AT4G22010 | 26.587 | 504 | 302 | 17 | 3 | 493 | 82 | 530 | 4.76e-31 | 126 |
| MS.gene46024.t1 | AT5G66920 | 26.587 | 504 | 303 | 18 | 1 | 493 | 91 | 538 | 6.17e-31 | 126 |
| MS.gene46024.t1 | AT1G55570 | 26.971 | 482 | 285 | 18 | 1 | 466 | 83 | 513 | 7.47e-31 | 126 |
| MS.gene46024.t1 | AT4G12420 | 26.915 | 483 | 309 | 17 | 3 | 475 | 81 | 529 | 1.09e-29 | 122 |
| MS.gene46024.t1 | AT4G12420 | 26.915 | 483 | 309 | 17 | 3 | 475 | 81 | 529 | 1.09e-29 | 122 |
| MS.gene46024.t1 | AT3G13390 | 25.625 | 480 | 294 | 16 | 1 | 466 | 82 | 512 | 2.53e-29 | 121 |
| MS.gene46024.t1 | AT4G37160 | 28.093 | 388 | 234 | 13 | 1 | 385 | 85 | 430 | 3.17e-29 | 120 |
| MS.gene46024.t1 | AT1G75790 | 25.819 | 519 | 301 | 21 | 1 | 493 | 81 | 541 | 2.96e-28 | 118 |
| MS.gene46024.t1 | AT4G28090 | 25.690 | 471 | 284 | 18 | 1 | 458 | 82 | 499 | 2.66e-27 | 115 |
| MS.gene46024.t1 | AT3G13400 | 26.522 | 460 | 288 | 18 | 1 | 453 | 81 | 497 | 1.59e-25 | 110 |
| MS.gene46024.t1 | AT3G13400 | 26.522 | 460 | 288 | 18 | 1 | 453 | 81 | 497 | 1.59e-25 | 110 |
| MS.gene46024.t1 | AT4G38420 | 25.108 | 462 | 299 | 16 | 1 | 457 | 84 | 503 | 6.39e-25 | 108 |
| MS.gene46024.t1 | AT1G55560 | 25.702 | 463 | 288 | 19 | 1 | 453 | 80 | 496 | 9.49e-25 | 107 |
| MS.gene46024.t1 | AT4G38420 | 24.773 | 440 | 284 | 16 | 3 | 437 | 86 | 483 | 3.74e-21 | 96.7 |
| MS.gene46024.t1 | AT4G38420 | 29.108 | 213 | 139 | 5 | 3 | 212 | 86 | 289 | 7.76e-19 | 89.4 |
Find 104 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATAAACTCAAGTATAATT+TGG | 0.260597 | 7.2:+43321010 | MS.gene46024:CDS |
| TACCAATCACCTAATATTAT+TGG | 0.268631 | 7.2:-43319899 | None:intergenic |
| TTCACGATCAATGGCTTTCC+TGG | 0.273544 | 7.2:+43319989 | MS.gene46024:CDS |
| CCTGTACACTTAGCATTTAC+AGG | 0.283680 | 7.2:-43320633 | None:intergenic |
| GGACATTGTGTTATATATTC+AGG | 0.298929 | 7.2:-43319710 | None:intergenic |
| ACAGCATTCATAGTTGAAAA+TGG | 0.311293 | 7.2:+43321302 | MS.gene46024:CDS |
| ATTATTGGTACTTCCTTGTT+GGG | 0.313318 | 7.2:-43319884 | None:intergenic |
| TGCTTCACCTTAGTCGATTT+CGG | 0.324244 | 7.2:-43320852 | None:intergenic |
| CATATAGCCAATTAACATTT+AGG | 0.326301 | 7.2:-43321368 | None:intergenic |
| TATTATTGGTACTTCCTTGT+TGG | 0.330309 | 7.2:-43319885 | None:intergenic |
| AGTGGGACAGGGACCCAATT+AGG | 0.336834 | 7.2:-43320558 | None:intergenic |
| TTGCTGTGCCGGTGGGAGGA+TGG | 0.341412 | 7.2:+43321057 | MS.gene46024:CDS |
| AAGGAAGTACCAATAATATT+AGG | 0.342662 | 7.2:+43319890 | MS.gene46024:CDS |
| AATCCATAGGATGAATGATT+TGG | 0.347132 | 7.2:+43318910 | None:intergenic |
| CAAATTATACTTGAGTTTAT+CGG | 0.350950 | 7.2:-43321009 | None:intergenic |
| CATTATCATTCAACCTCGTT+CGG | 0.355902 | 7.2:+43319841 | MS.gene46024:CDS |
| TGCTGTGCCGGTGGGAGGAT+GGG | 0.368851 | 7.2:+43321058 | MS.gene46024:CDS |
| TTCGGTGTAAATGTAACATT+AGG | 0.379226 | 7.2:-43320834 | None:intergenic |
| ATGTGGATGATCATAATCTA+TGG | 0.380123 | 7.2:+43321270 | MS.gene46024:CDS |
| TCCTTGTTGGGCTTAGGAAA+TGG | 0.380932 | 7.2:-43319872 | None:intergenic |
| ACGATTATATCGGTGGTATA+AGG | 0.384708 | 7.2:-43320273 | None:intergenic |
| CGAACGAGGTTGAATGATAA+TGG | 0.418168 | 7.2:-43319840 | None:intergenic |
| TCGCAACACGGTTGCTGTGC+CGG | 0.420527 | 7.2:+43321046 | MS.gene46024:CDS |
| GGTACTTCCTTGTTGGGCTT+AGG | 0.432648 | 7.2:-43319878 | None:intergenic |
| CACAACAAGAAGGAACATTA+TGG | 0.433064 | 7.2:+43319774 | MS.gene46024:CDS |
| TCTGATGCTTTCACGATCAA+TGG | 0.433473 | 7.2:+43319980 | MS.gene46024:CDS |
| GATATAATCGTCATCGCAGC+AGG | 0.436995 | 7.2:+43320285 | MS.gene46024:CDS |
| CGAGTGCAGCGTTGACCATT+CGG | 0.438662 | 7.2:-43320179 | None:intergenic |
| TACCAATAATATTAGGTGAT+TGG | 0.440913 | 7.2:+43319897 | MS.gene46024:CDS |
| AGTCATCCCATGCATCTTCA+TGG | 0.452974 | 7.2:+43320936 | MS.gene46024:CDS |
| ATATTAGGTGATTGGTATGA+TGG | 0.463238 | 7.2:+43319905 | MS.gene46024:CDS |
| GCCATGTAGTATGAACCTTT+TGG | 0.463483 | 7.2:-43320342 | None:intergenic |
| ACATACCAGGATTGTCAGTT+CGG | 0.465483 | 7.2:-43321094 | None:intergenic |
| CTGTCCATGCACTATATAGC+TGG | 0.468583 | 7.2:-43319682 | None:intergenic |
| GCAACCGTGTTGCGAATTGA+AGG | 0.469608 | 7.2:-43321038 | None:intergenic |
| GCAACATAACTGGTCTTGTA+GGG | 0.469945 | 7.2:+43320532 | MS.gene46024:CDS |
| TACTTGAGTTTATCGGTAGT+AGG | 0.471637 | 7.2:-43321002 | None:intergenic |
| GCTGCATCACCTTATGTTGT+TGG | 0.473113 | 7.2:+43320363 | MS.gene46024:CDS |
| CCAACACCTTCAACTTCACT+TGG | 0.476302 | 7.2:+43321326 | MS.gene46024:CDS |
| GTTGACCATTCGGAACAAAT+AGG | 0.478262 | 7.2:-43320169 | None:intergenic |
| CTCGGTGTATGCGGCATCCA+TGG | 0.481870 | 7.2:-43320250 | None:intergenic |
| CATGTATATTACAATTAACA+TGG | 0.490105 | 7.2:+43320596 | MS.gene46024:CDS |
| TGGAAAAGGATATTCCATAA+TGG | 0.491498 | 7.2:+43320713 | MS.gene46024:CDS |
| ATTTACACCGAAATCGACTA+AGG | 0.491745 | 7.2:+43320845 | MS.gene46024:CDS |
| CCTGTAAATGCTAAGTGTAC+AGG | 0.492619 | 7.2:+43320633 | MS.gene46024:CDS |
| AGCAACATAACTGGTCTTGT+AGG | 0.494287 | 7.2:+43320531 | MS.gene46024:CDS |
| ACATTTAGTACCTTTGATGC+CGG | 0.504468 | 7.2:+43320464 | MS.gene46024:CDS |
| CACTTAGCATTTACAGGACA+AGG | 0.505158 | 7.2:-43320627 | None:intergenic |
| TGAAAAGTATATCAGCGCTT+TGG | 0.511942 | 7.2:-43320308 | None:intergenic |
| ACTGGTTCACCAACAACATA+AGG | 0.513560 | 7.2:-43320372 | None:intergenic |
| TCATCCACTTCAAGTGGGAC+AGG | 0.515815 | 7.2:-43320570 | None:intergenic |
| TGTGGATGATCATAATCTAT+GGG | 0.516377 | 7.2:+43321271 | MS.gene46024:CDS |
| AAAGACGACAGCACGAGTTG+TGG | 0.517938 | 7.2:-43320412 | None:intergenic |
| ATTATCATTCAACCTCGTTC+GGG | 0.518373 | 7.2:+43319842 | MS.gene46024:CDS |
| TTCACAGCAGACCAACCAAA+AGG | 0.519262 | 7.2:+43320327 | MS.gene46024:CDS |
| GTTGTACGTGCAACAGTTCA+CGG | 0.522175 | 7.2:+43319815 | MS.gene46024:CDS |
| CAACACGGTTGCTGTGCCGG+TGG | 0.525329 | 7.2:+43321049 | MS.gene46024:CDS |
| GAACAATTGAAGAGATCGCC+AGG | 0.537334 | 7.2:-43320007 | None:intergenic |
| TTCATACCATGAAGATGCAT+GGG | 0.538306 | 7.2:-43320942 | None:intergenic |
| ATTCATACCATGAAGATGCA+TGG | 0.538422 | 7.2:-43320943 | None:intergenic |
| CAAATTCACAGTTGTAGCCA+TGG | 0.551620 | 7.2:+43320233 | MS.gene46024:CDS |
| CAAATACAATTCAACGGTGG+AGG | 0.551874 | 7.2:+43320878 | MS.gene46024:CDS |
| AGTGGTAATGCCGGCATCAA+AGG | 0.554962 | 7.2:-43320474 | None:intergenic |
| TAACATTTAGGCAAATCAGC+AGG | 0.558427 | 7.2:-43321356 | None:intergenic |
| GAATTGTCGAAGAGTCCTAC+TGG | 0.559246 | 7.2:-43320390 | None:intergenic |
| AGATTCCGAACTGACAATCC+TGG | 0.559455 | 7.2:+43321089 | MS.gene46024:CDS |
| TTAGGCAAATCAGCAGGTGG+TGG | 0.560545 | 7.2:-43321350 | None:intergenic |
| GGTCCCTGTCCCACTTGAAG+TGG | 0.563821 | 7.2:+43320566 | MS.gene46024:CDS |
| TGCTGCGATGACGATTATAT+CGG | 0.564209 | 7.2:-43320283 | None:intergenic |
| AACACGGTTGCTGTGCCGGT+GGG | 0.573459 | 7.2:+43321050 | MS.gene46024:CDS |
| AAAGACCTATTTGTTCCGAA+TGG | 0.575759 | 7.2:+43320164 | MS.gene46024:CDS |
| ACCAAAAGGTTCATACTACA+TGG | 0.591334 | 7.2:+43320341 | MS.gene46024:CDS |
| TGTTCCAGCTATATAGTGCA+TGG | 0.592735 | 7.2:+43319678 | MS.gene46024:CDS |
| ATGTGTTCATCCACTTCAAG+TGG | 0.592927 | 7.2:-43320576 | None:intergenic |
| GCTAAGTGTACAGGTCCACT+TGG | 0.593627 | 7.2:+43320642 | MS.gene46024:CDS |
| ATGTATATTACAATTAACAT+GGG | 0.593904 | 7.2:+43320597 | MS.gene46024:CDS |
| ACGGTTGCTGTGCCGGTGGG+AGG | 0.595198 | 7.2:+43321053 | MS.gene46024:CDS |
| TTTAATGTGACACAACAAGA+AGG | 0.597981 | 7.2:+43319764 | MS.gene46024:CDS |
| GAATCCTTCAATTCGCAACA+CGG | 0.600436 | 7.2:+43321034 | MS.gene46024:CDS |
| ATAGCAGCCCATCCTCCCAC+CGG | 0.601570 | 7.2:-43321065 | None:intergenic |
| CTATATAGTGCATGGACAGA+CGG | 0.608290 | 7.2:+43319686 | MS.gene46024:CDS |
| CATCCACTTCAAGTGGGACA+GGG | 0.612302 | 7.2:-43320569 | None:intergenic |
| GCAATTCAAATACAATTCAA+CGG | 0.613563 | 7.2:+43320872 | MS.gene46024:CDS |
| TTGTTATGAAGTGGTAATGC+CGG | 0.614295 | 7.2:-43320483 | None:intergenic |
| CCAAGTGAAGTTGAAGGTGT+TGG | 0.618280 | 7.2:-43321326 | None:intergenic |
| TATGTTGTTGGTGAACCAGT+AGG | 0.621180 | 7.2:+43320375 | MS.gene46024:CDS |
| GGTATAAGGCTCGGTGTATG+CGG | 0.622760 | 7.2:-43320259 | None:intergenic |
| TCCATTTCCTAAGCCCAACA+AGG | 0.625302 | 7.2:+43319871 | MS.gene46024:CDS |
| AATGGAAATCGACCCGAACG+AGG | 0.625609 | 7.2:-43319854 | None:intergenic |
| TATATCGGTGGTATAAGGCT+CGG | 0.628540 | 7.2:-43320268 | None:intergenic |
| CAACATAACTGGTCTTGTAG+GGG | 0.631983 | 7.2:+43320533 | MS.gene46024:CDS |
| ATTGGTGTATTGTTATGAAG+TGG | 0.638592 | 7.2:-43320492 | None:intergenic |
| TATAAGCTGAAAGTGAAGCA+AGG | 0.638942 | 7.2:+43320141 | MS.gene46024:CDS |
| TGCGATGACGATTATATCGG+TGG | 0.644549 | 7.2:-43320280 | None:intergenic |
| TACAACTGTGAATTTGTGAT+CGG | 0.646281 | 7.2:-43320226 | None:intergenic |
| AACATAACTGGTCTTGTAGG+GGG | 0.647653 | 7.2:+43320534 | MS.gene46024:CDS |
| GGTGGACCAAGTGAAGTTGA+AGG | 0.647739 | 7.2:-43321332 | None:intergenic |
| CATTTAGGCAAATCAGCAGG+TGG | 0.649176 | 7.2:-43321353 | None:intergenic |
| TTGATCGTGAAAGCATCAGA+TGG | 0.662787 | 7.2:-43319977 | None:intergenic |
| TTGGTATGATGGAAATGTTG+AGG | 0.683745 | 7.2:+43319916 | MS.gene46024:CDS |
| GTGGATGATCATAATCTATG+GGG | 0.686953 | 7.2:+43321272 | MS.gene46024:CDS |
| AACAAGAAGGAACATTATGG+TGG | 0.690252 | 7.2:+43319777 | MS.gene46024:CDS |
| TGTGTTCATCCACTTCAAGT+GGG | 0.704295 | 7.2:-43320575 | None:intergenic |
| ATTCAAATACAATTCAACGG+TGG | 0.707341 | 7.2:+43320875 | MS.gene46024:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAATAAAAAAAAA+AGG | - | chr7.2:43321146-43321165 | None:intergenic | 0.0% |
| !! | TAAAAAAAATAAAAAAAAAA+GGG | - | chr7.2:43321145-43321164 | None:intergenic | 0.0% |
| !!! | ACTTTATCTTTTATTTTTTT+GGG | + | chr7.2:43319274-43319293 | MS.gene46024:intron | 10.0% |
| !! | ATGTATATTACAATTAACAT+GGG | + | chr7.2:43320597-43320616 | MS.gene46024:CDS | 15.0% |
| !!! | AATTTCTTGATTGTTTATTT+TGG | + | chr7.2:43321223-43321242 | MS.gene46024:intron | 15.0% |
| !!! | GACTTTATCTTTTATTTTTT+TGG | + | chr7.2:43319273-43319292 | MS.gene46024:intron | 15.0% |
| !!! | TTGTATGTAAATTTATTTTC+AGG | - | chr7.2:43319743-43319762 | None:intergenic | 15.0% |
| !! | AAAAAAAAAATGCCTTCAAT+TGG | - | chr7.2:43319183-43319202 | None:intergenic | 20.0% |
| !! | AATTTACACAAAATTAGAGA+AGG | - | chr7.2:43320058-43320077 | None:intergenic | 20.0% |
| !! | ATAAAATACTTATACATACC+AGG | - | chr7.2:43321110-43321129 | None:intergenic | 20.0% |
| !! | CAAATTATACTTGAGTTTAT+CGG | - | chr7.2:43321012-43321031 | None:intergenic | 20.0% |
| !! | CATGTATATTACAATTAACA+TGG | + | chr7.2:43320596-43320615 | MS.gene46024:CDS | 20.0% |
| !!! | AAAATCGTATGTTTCTATTT+TGG | + | chr7.2:43320032-43320051 | MS.gene46024:intron | 20.0% |
| !!! | AGAGAAACTTTAGTTTTTAT+AGG | + | chr7.2:43319410-43319429 | MS.gene46024:intron | 20.0% |
| !!! | GTCTAATTAAATTCACTTTT+TGG | - | chr7.2:43319436-43319455 | None:intergenic | 20.0% |
| !!! | TGAATTTTTGAACTATGTAA+AGG | + | chr7.2:43319648-43319667 | MS.gene46024:intron | 20.0% |
| !!! | TTAGGATCCAAAAATATTTT+CGG | - | chr7.2:43320819-43320838 | None:intergenic | 20.0% |
| ! | ACTGTTTGCAATTAATAAGT+GGG | + | chr7.2:43319323-43319342 | MS.gene46024:intron | 25.0% |
| ! | CGATAAACTCAAGTATAATT+TGG | + | chr7.2:43321010-43321029 | MS.gene46024:CDS | 25.0% |
| ! | CTTTGTAAGCATAAAAAATG+TGG | - | chr7.2:43319095-43319114 | None:intergenic | 25.0% |
| ! | GCAATTCAAATACAATTCAA+CGG | + | chr7.2:43320872-43320891 | MS.gene46024:CDS | 25.0% |
| ! | GTAAAAATATGCTTCCATTA+TGG | - | chr7.2:43320730-43320749 | None:intergenic | 25.0% |
| ! | TACCAATAATATTAGGTGAT+TGG | + | chr7.2:43319897-43319916 | MS.gene46024:CDS | 25.0% |
| ! | TACCAATCACCTAATATTAT+TGG | - | chr7.2:43319902-43319921 | None:intergenic | 25.0% |
| ! | TTATATATGAGTTCTTTCTC+TGG | - | chr7.2:43319563-43319582 | None:intergenic | 25.0% |
| ! | TTTACGAAGTCGAAAAATTT+AGG | - | chr7.2:43320795-43320814 | None:intergenic | 25.0% |
| !! | ATGTCTAGTCTTTAAATGTT+TGG | + | chr7.2:43319238-43319257 | MS.gene46024:intron | 25.0% |
| !! | TAGGATCCAAAAATATTTTC+GGG | - | chr7.2:43320818-43320837 | None:intergenic | 25.0% |
| !! | TGGTATGAATTTTCATGTTT+TGG | + | chr7.2:43320956-43320975 | MS.gene46024:CDS | 25.0% |
| !!! | AAAGGGAGACTTTTTTTTTT+TGG | + | chr7.2:43319038-43319057 | MS.gene46024:intron | 25.0% |
| !!! | AAATTTTTCAGCAACATAAC+TGG | + | chr7.2:43320522-43320541 | MS.gene46024:CDS | 25.0% |
| !!! | AAGGAAGTACCAATAATATT+AGG | + | chr7.2:43319890-43319909 | MS.gene46024:CDS | 25.0% |
| !!! | AATTTATTTTCAGGACGAAT+TGG | - | chr7.2:43319734-43319753 | None:intergenic | 25.0% |
| !!! | CACATTTTTTATGCTTACAA+AGG | + | chr7.2:43319093-43319112 | MS.gene46024:intron | 25.0% |
| !!! | TGCTGCTTTTTAAAATTGAT+TGG | + | chr7.2:43318980-43318999 | MS.gene46024:intron | 25.0% |
| !!! | TTTTTTGGTTACAAGACAAA+GGG | + | chr7.2:43319053-43319072 | MS.gene46024:intron | 25.0% |
| !!! | TTTTTTTGGTTACAAGACAA+AGG | + | chr7.2:43319052-43319071 | MS.gene46024:intron | 25.0% |
| !!! | TTTTTTTTGTTGCCAAGATT+TGG | + | chr7.2:43319196-43319215 | MS.gene46024:intron | 25.0% |
| AAAAATTTAGGAGGGTTATC+TGG | - | chr7.2:43320783-43320802 | None:intergenic | 30.0% | |
| ACAGCATTCATAGTTGAAAA+TGG | + | chr7.2:43321302-43321321 | MS.gene46024:CDS | 30.0% | |
| AGTTCAATATGGAATGTTGA+AGG | + | chr7.2:43319139-43319158 | MS.gene46024:intron | 30.0% | |
| ATATTAGGTGATTGGTATGA+TGG | + | chr7.2:43319905-43319924 | MS.gene46024:CDS | 30.0% | |
| ATGTATGAGATCTTTCTCTT+GGG | - | chr7.2:43319504-43319523 | None:intergenic | 30.0% | |
| ATGTGGATGATCATAATCTA+TGG | + | chr7.2:43321270-43321289 | MS.gene46024:CDS | 30.0% | |
| ATTATTGGTACTTCCTTGTT+GGG | - | chr7.2:43319887-43319906 | None:intergenic | 30.0% | |
| ATTCAAATACAATTCAACGG+TGG | + | chr7.2:43320875-43320894 | MS.gene46024:CDS | 30.0% | |
| ATTGGTGTATTGTTATGAAG+TGG | - | chr7.2:43320495-43320514 | None:intergenic | 30.0% | |
| CACTGTTTGCAATTAATAAG+TGG | + | chr7.2:43319322-43319341 | MS.gene46024:intron | 30.0% | |
| CTGAAAAATTTGTGAGCTAT+TGG | - | chr7.2:43320513-43320532 | None:intergenic | 30.0% | |
| GGACATTGTGTTATATATTC+AGG | - | chr7.2:43319713-43319732 | None:intergenic | 30.0% | |
| TACAACTGTGAATTTGTGAT+CGG | - | chr7.2:43320229-43320248 | None:intergenic | 30.0% | |
| TATGTATGAGATCTTTCTCT+TGG | - | chr7.2:43319505-43319524 | None:intergenic | 30.0% | |
| TATTATTGGTACTTCCTTGT+TGG | - | chr7.2:43319888-43319907 | None:intergenic | 30.0% | |
| TGGAAAAGGATATTCCATAA+TGG | + | chr7.2:43320713-43320732 | MS.gene46024:CDS | 30.0% | |
| TGTGGATGATCATAATCTAT+GGG | + | chr7.2:43321271-43321290 | MS.gene46024:CDS | 30.0% | |
| TTTAATGTGACACAACAAGA+AGG | + | chr7.2:43319764-43319783 | MS.gene46024:CDS | 30.0% | |
| TTTCTAGATGCAGTTCAATA+TGG | + | chr7.2:43319128-43319147 | MS.gene46024:intron | 30.0% | |
| ! | CGTAAACCCGAAAATATTTT+TGG | + | chr7.2:43320809-43320828 | MS.gene46024:CDS | 30.0% |
| ! | TTCGGTGTAAATGTAACATT+AGG | - | chr7.2:43320837-43320856 | None:intergenic | 30.0% |
| ! | TTTAAAATTGATTGGAGAGC+AGG | + | chr7.2:43318988-43319007 | MS.gene46024:intron | 30.0% |
| ! | TTTTGAACTATGTAAAGGCA+TGG | + | chr7.2:43319653-43319672 | MS.gene46024:intron | 30.0% |
| !! | GCATATTTTTACAATGTGAG+TGG | + | chr7.2:43320738-43320757 | MS.gene46024:CDS | 30.0% |
| !! | TTTTGGGTCAAATAACATAG+TGG | + | chr7.2:43319290-43319309 | MS.gene46024:intron | 30.0% |
| !!! | CTTGATTGTTTATTTTGGCA+GGG | + | chr7.2:43321228-43321247 | MS.gene46024:intron | 30.0% |
| !!! | TCTTGATTGTTTATTTTGGC+AGG | + | chr7.2:43321227-43321246 | MS.gene46024:intron | 30.0% |
| !!! | TTGATTGTTTATTTTGGCAG+GGG | + | chr7.2:43321229-43321248 | MS.gene46024:intron | 30.0% |
| AAAGACCTATTTGTTCCGAA+TGG | + | chr7.2:43320164-43320183 | MS.gene46024:CDS | 35.0% | |
| AAAGATAAAGTCTCCTCTCA+TGG | - | chr7.2:43319265-43319284 | None:intergenic | 35.0% | |
| AAATGCCTTCAATTGGTGAA+AGG | - | chr7.2:43319176-43319195 | None:intergenic | 35.0% | |
| AACAAGAAGGAACATTATGG+TGG | + | chr7.2:43319777-43319796 | MS.gene46024:CDS | 35.0% | |
| ACATTTAGTACCTTTGATGC+CGG | + | chr7.2:43320464-43320483 | MS.gene46024:CDS | 35.0% | |
| ACCAAAAGGTTCATACTACA+TGG | + | chr7.2:43320341-43320360 | MS.gene46024:CDS | 35.0% | |
| ACGAAGTCGAAAAATTTAGG+AGG | - | chr7.2:43320792-43320811 | None:intergenic | 35.0% | |
| ACGATTATATCGGTGGTATA+AGG | - | chr7.2:43320276-43320295 | None:intergenic | 35.0% | |
| ATCCAAAAAGAACTCGAAAC+AGG | + | chr7.2:43319944-43319963 | MS.gene46024:CDS | 35.0% | |
| ATTATCATTCAACCTCGTTC+GGG | + | chr7.2:43319842-43319861 | MS.gene46024:CDS | 35.0% | |
| ATTCATACCATGAAGATGCA+TGG | - | chr7.2:43320946-43320965 | None:intergenic | 35.0% | |
| ATTTACACCGAAATCGACTA+AGG | + | chr7.2:43320845-43320864 | MS.gene46024:CDS | 35.0% | |
| CACAACAAGAAGGAACATTA+TGG | + | chr7.2:43319774-43319793 | MS.gene46024:CDS | 35.0% | |
| CATTATCATTCAACCTCGTT+CGG | + | chr7.2:43319841-43319860 | MS.gene46024:CDS | 35.0% | |
| CGAAGTCGAAAAATTTAGGA+GGG | - | chr7.2:43320791-43320810 | None:intergenic | 35.0% | |
| GATTGTGACAAACCAAATCT+TGG | - | chr7.2:43319211-43319230 | None:intergenic | 35.0% | |
| GTGGATGATCATAATCTATG+GGG | + | chr7.2:43321272-43321291 | MS.gene46024:CDS | 35.0% | |
| TAACATTTAGGCAAATCAGC+AGG | - | chr7.2:43321359-43321378 | None:intergenic | 35.0% | |
| TACTTGAGTTTATCGGTAGT+AGG | - | chr7.2:43321005-43321024 | None:intergenic | 35.0% | |
| TATAAGCTGAAAGTGAAGCA+AGG | + | chr7.2:43320141-43320160 | MS.gene46024:CDS | 35.0% | |
| TCAAACCTTTCACCAATTGA+AGG | + | chr7.2:43319168-43319187 | MS.gene46024:intron | 35.0% | |
| TTAAATGTTTGGTCCATGAG+AGG | + | chr7.2:43319249-43319268 | MS.gene46024:intron | 35.0% | |
| TTCATACCATGAAGATGCAT+GGG | - | chr7.2:43320945-43320964 | None:intergenic | 35.0% | |
| TTTCTCTCGTGAAATTCAGT+TGG | - | chr7.2:43319397-43319416 | None:intergenic | 35.0% | |
| ! | ATGGAATATCCTTTTCCAAC+AGG | - | chr7.2:43320711-43320730 | None:intergenic | 35.0% |
| ! | ATGGTTTTTGCATTGTCATG+TGG | + | chr7.2:43321253-43321272 | MS.gene46024:CDS | 35.0% |
| ! | GATGCAAATTTTTGTCCAAG+TGG | - | chr7.2:43320660-43320679 | None:intergenic | 35.0% |
| ! | GTTCTTTCTCTGGATTTTGA+TGG | - | chr7.2:43319553-43319572 | None:intergenic | 35.0% |
| ! | TGAAAAGTATATCAGCGCTT+TGG | - | chr7.2:43320311-43320330 | None:intergenic | 35.0% |
| ! | TGTAGTATGAACCTTTTGGT+TGG | - | chr7.2:43320341-43320360 | None:intergenic | 35.0% |
| ! | TTGGTATGATGGAAATGTTG+AGG | + | chr7.2:43319916-43319935 | MS.gene46024:CDS | 35.0% |
| ! | TTGTTATGAAGTGGTAATGC+CGG | - | chr7.2:43320486-43320505 | None:intergenic | 35.0% |
| ! | TTTTTGCTTCCTGTTGGAAA+AGG | + | chr7.2:43320699-43320718 | MS.gene46024:CDS | 35.0% |
| ACATACCAGGATTGTCAGTT+CGG | - | chr7.2:43321097-43321116 | None:intergenic | 40.0% | |
| ATGTGTTCATCCACTTCAAG+TGG | - | chr7.2:43320579-43320598 | None:intergenic | 40.0% | |
| CAAATACAATTCAACGGTGG+AGG | + | chr7.2:43320878-43320897 | MS.gene46024:CDS | 40.0% | |
| CAAATTCACAGTTGTAGCCA+TGG | + | chr7.2:43320233-43320252 | MS.gene46024:CDS | 40.0% | |
| CACTTAGCATTTACAGGACA+AGG | - | chr7.2:43320630-43320649 | None:intergenic | 40.0% | |
| CCTGTAAATGCTAAGTGTAC+AGG | + | chr7.2:43320633-43320652 | MS.gene46024:CDS | 40.0% | |
| CCTGTACACTTAGCATTTAC+AGG | - | chr7.2:43320636-43320655 | None:intergenic | 40.0% | |
| CGAACGAGGTTGAATGATAA+TGG | - | chr7.2:43319843-43319862 | None:intergenic | 40.0% | |
| CTATATAGTGCATGGACAGA+CGG | + | chr7.2:43319686-43319705 | MS.gene46024:CDS | 40.0% | |
| GAATCCTTCAATTCGCAACA+CGG | + | chr7.2:43321034-43321053 | MS.gene46024:CDS | 40.0% | |
| GTTGACCATTCGGAACAAAT+AGG | - | chr7.2:43320172-43320191 | None:intergenic | 40.0% | |
| TATATCGGTGGTATAAGGCT+CGG | - | chr7.2:43320271-43320290 | None:intergenic | 40.0% | |
| TCTCGTGAAATTCAGTTGGT+AGG | - | chr7.2:43319393-43319412 | None:intergenic | 40.0% | |
| TCTGATGCTTTCACGATCAA+TGG | + | chr7.2:43319980-43319999 | MS.gene46024:CDS | 40.0% | |
| TGCTGCGATGACGATTATAT+CGG | - | chr7.2:43320286-43320305 | None:intergenic | 40.0% | |
| TGTGTTCATCCACTTCAAGT+GGG | - | chr7.2:43320578-43320597 | None:intergenic | 40.0% | |
| TGTTCCAGCTATATAGTGCA+TGG | + | chr7.2:43319678-43319697 | MS.gene46024:CDS | 40.0% | |
| ! | AATGCACTGATCAGAGACAA+AGG | + | chr7.2:43319020-43319039 | MS.gene46024:intron | 40.0% |
| ! | ACTGGTTCACCAACAACATA+AGG | - | chr7.2:43320375-43320394 | None:intergenic | 40.0% |
| ! | ATGCACTGATCAGAGACAAA+GGG | + | chr7.2:43319021-43319040 | MS.gene46024:intron | 40.0% |
| ! | CTCGTGAAATTCAGTTGGTA+GGG | - | chr7.2:43319392-43319411 | None:intergenic | 40.0% |
| ! | GCCATGTAGTATGAACCTTT+TGG | - | chr7.2:43320345-43320364 | None:intergenic | 40.0% |
| ! | TATGTTGTTGGTGAACCAGT+AGG | + | chr7.2:43320375-43320394 | MS.gene46024:CDS | 40.0% |
| ! | TCTCTTGGGTTTACTAGTCT+TGG | - | chr7.2:43319490-43319509 | None:intergenic | 40.0% |
| ! | TGCTTCACCTTAGTCGATTT+CGG | - | chr7.2:43320855-43320874 | None:intergenic | 40.0% |
| !! | AACATAACTGGTCTTGTAGG+GGG | + | chr7.2:43320534-43320553 | MS.gene46024:CDS | 40.0% |
| !! | AGCAACATAACTGGTCTTGT+AGG | + | chr7.2:43320531-43320550 | MS.gene46024:CDS | 40.0% |
| !! | CAACATAACTGGTCTTGTAG+GGG | + | chr7.2:43320533-43320552 | MS.gene46024:CDS | 40.0% |
| !! | CTTTCTCTGGATTTTGATGG+TGG | - | chr7.2:43319550-43319569 | None:intergenic | 40.0% |
| !! | GCAACATAACTGGTCTTGTA+GGG | + | chr7.2:43320532-43320551 | MS.gene46024:CDS | 40.0% |
| !! | TTGATCGTGAAAGCATCAGA+TGG | - | chr7.2:43319980-43319999 | None:intergenic | 40.0% |
| !!! | ATGTTTTGGCTCAAGACTTC+GGG | + | chr7.2:43320970-43320989 | MS.gene46024:CDS | 40.0% |
| !!! | CATGTTTTGGCTCAAGACTT+CGG | + | chr7.2:43320969-43320988 | MS.gene46024:CDS | 40.0% |
| !!! | GAGTCATTTTTGCTTCCTGT+TGG | + | chr7.2:43320693-43320712 | MS.gene46024:CDS | 40.0% |
| !!! | TGTTTATTTTGGCAGGGGTA+TGG | + | chr7.2:43321234-43321253 | MS.gene46024:intron | 40.0% |
| AGATTCCGAACTGACAATCC+TGG | + | chr7.2:43321089-43321108 | MS.gene46024:CDS | 45.0% | |
| AGTCATCCCATGCATCTTCA+TGG | + | chr7.2:43320936-43320955 | MS.gene46024:CDS | 45.0% | |
| CAGATTATGTGCAAGCGTCA+GGG | - | chr7.2:43319365-43319384 | None:intergenic | 45.0% | |
| CATTTAGGCAAATCAGCAGG+TGG | - | chr7.2:43321356-43321375 | None:intergenic | 45.0% | |
| CCAACACCTTCAACTTCACT+TGG | + | chr7.2:43321326-43321345 | MS.gene46024:CDS | 45.0% | |
| CTGTCCATGCACTATATAGC+TGG | - | chr7.2:43319685-43319704 | None:intergenic | 45.0% | |
| GAACAATTGAAGAGATCGCC+AGG | - | chr7.2:43320010-43320029 | None:intergenic | 45.0% | |
| GAATTGTCGAAGAGTCCTAC+TGG | - | chr7.2:43320393-43320412 | None:intergenic | 45.0% | |
| GATATAATCGTCATCGCAGC+AGG | + | chr7.2:43320285-43320304 | MS.gene46024:CDS | 45.0% | |
| GCTGCATCACCTTATGTTGT+TGG | + | chr7.2:43320363-43320382 | MS.gene46024:CDS | 45.0% | |
| GTTGTACGTGCAACAGTTCA+CGG | + | chr7.2:43319815-43319834 | MS.gene46024:CDS | 45.0% | |
| TCAGATTATGTGCAAGCGTC+AGG | - | chr7.2:43319366-43319385 | None:intergenic | 45.0% | |
| TCCATTTCCTAAGCCCAACA+AGG | + | chr7.2:43319871-43319890 | MS.gene46024:CDS | 45.0% | |
| TCCTTGTTGGGCTTAGGAAA+TGG | - | chr7.2:43319875-43319894 | None:intergenic | 45.0% | |
| TCTTGTAGGGGGTCCTAATT+GGG | + | chr7.2:43320545-43320564 | MS.gene46024:CDS | 45.0% | |
| TGCGATGACGATTATATCGG+TGG | - | chr7.2:43320283-43320302 | None:intergenic | 45.0% | |
| TTCACAGCAGACCAACCAAA+AGG | + | chr7.2:43320327-43320346 | MS.gene46024:CDS | 45.0% | |
| TTCACGATCAATGGCTTTCC+TGG | + | chr7.2:43319989-43320008 | MS.gene46024:CDS | 45.0% | |
| ! | CCAAGTGAAGTTGAAGGTGT+TGG | - | chr7.2:43321329-43321348 | None:intergenic | 45.0% |
| !!! | CGCCTGTTTCGAGTTCTTTT+TGG | - | chr7.2:43319949-43319968 | None:intergenic | 45.0% |
| AAAGACGACAGCACGAGTTG+TGG | - | chr7.2:43320415-43320434 | None:intergenic | 50.0% | |
| AATGGAAATCGACCCGAACG+AGG | - | chr7.2:43319857-43319876 | None:intergenic | 50.0% | |
| CATCCACTTCAAGTGGGACA+GGG | - | chr7.2:43320572-43320591 | None:intergenic | 50.0% | |
| GCAACCGTGTTGCGAATTGA+AGG | - | chr7.2:43321041-43321060 | None:intergenic | 50.0% | |
| GCTAAGTGTACAGGTCCACT+TGG | + | chr7.2:43320642-43320661 | MS.gene46024:CDS | 50.0% | |
| GGTACTTCCTTGTTGGGCTT+AGG | - | chr7.2:43319881-43319900 | None:intergenic | 50.0% | |
| GGTGGACCAAGTGAAGTTGA+AGG | - | chr7.2:43321335-43321354 | None:intergenic | 50.0% | |
| GTCTTGTAGGGGGTCCTAAT+TGG | + | chr7.2:43320544-43320563 | MS.gene46024:CDS | 50.0% | |
| TCATCCACTTCAAGTGGGAC+AGG | - | chr7.2:43320573-43320592 | None:intergenic | 50.0% | |
| TTAGGCAAATCAGCAGGTGG+TGG | - | chr7.2:43321353-43321372 | None:intergenic | 50.0% | |
| ! | AGTGGTAATGCCGGCATCAA+AGG | - | chr7.2:43320477-43320496 | None:intergenic | 50.0% |
| ! | TCGTGCTGTCGTCTTTTACG+AGG | + | chr7.2:43320419-43320438 | MS.gene46024:CDS | 50.0% |
| !! | GGTATAAGGCTCGGTGTATG+CGG | - | chr7.2:43320262-43320281 | None:intergenic | 50.0% |
| AGTGGGACAGGGACCCAATT+AGG | - | chr7.2:43320561-43320580 | None:intergenic | 55.0% | |
| !! | CGAGTGCAGCGTTGACCATT+CGG | - | chr7.2:43320182-43320201 | None:intergenic | 55.0% |
| ATAGCAGCCCATCCTCCCAC+CGG | - | chr7.2:43321068-43321087 | None:intergenic | 60.0% | |
| GGTCCCTGTCCCACTTGAAG+TGG | + | chr7.2:43320566-43320585 | MS.gene46024:CDS | 60.0% | |
| TCGCAACACGGTTGCTGTGC+CGG | + | chr7.2:43321046-43321065 | MS.gene46024:CDS | 60.0% | |
| ! | AACACGGTTGCTGTGCCGGT+GGG | + | chr7.2:43321050-43321069 | MS.gene46024:CDS | 60.0% |
| ! | CTCGGTGTATGCGGCATCCA+TGG | - | chr7.2:43320253-43320272 | None:intergenic | 60.0% |
| CAACACGGTTGCTGTGCCGG+TGG | + | chr7.2:43321049-43321068 | MS.gene46024:CDS | 65.0% | |
| ! | TGCTGTGCCGGTGGGAGGAT+GGG | + | chr7.2:43321058-43321077 | MS.gene46024:CDS | 65.0% |
| ! | TTGCTGTGCCGGTGGGAGGA+TGG | + | chr7.2:43321057-43321076 | MS.gene46024:CDS | 65.0% |
| ! | ACGGTTGCTGTGCCGGTGGG+AGG | + | chr7.2:43321053-43321072 | MS.gene46024:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 43318924 | 43321379 | 43318924 | ID=MS.gene46024 |
| chr7.2 | mRNA | 43318924 | 43321379 | 43318924 | ID=MS.gene46024.t1;Parent=MS.gene46024 |
| chr7.2 | exon | 43318924 | 43318931 | 43318924 | ID=MS.gene46024.t1.exon1;Parent=MS.gene46024.t1 |
| chr7.2 | CDS | 43318924 | 43318931 | 43318924 | ID=cds.MS.gene46024.t1;Parent=MS.gene46024.t1 |
| chr7.2 | exon | 43319670 | 43320037 | 43319670 | ID=MS.gene46024.t1.exon2;Parent=MS.gene46024.t1 |
| chr7.2 | CDS | 43319670 | 43320037 | 43319670 | ID=cds.MS.gene46024.t1;Parent=MS.gene46024.t1 |
| chr7.2 | exon | 43320136 | 43321110 | 43320136 | ID=MS.gene46024.t1.exon3;Parent=MS.gene46024.t1 |
| chr7.2 | CDS | 43320136 | 43321110 | 43320136 | ID=cds.MS.gene46024.t1;Parent=MS.gene46024.t1 |
| chr7.2 | exon | 43321249 | 43321379 | 43321249 | ID=MS.gene46024.t1.exon4;Parent=MS.gene46024.t1 |
| chr7.2 | CDS | 43321249 | 43321379 | 43321249 | ID=cds.MS.gene46024.t1;Parent=MS.gene46024.t1 |
| Gene Sequence |
| Protein sequence |
