AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49202

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49202.t1 MTR_5g072860 94.505 455 24 1 12 466 18 471 0.0 883
MS.gene49202.t1 MTR_5g075440 55.677 458 196 4 7 462 5 457 0.0 521
MS.gene49202.t1 MTR_3g031450 53.928 471 184 11 1 461 5 452 1.67e-173 496
MS.gene49202.t1 MTR_3g031400 53.731 469 183 10 2 461 7 450 8.35e-173 494
MS.gene49202.t1 MTR_5g072810 50.881 454 210 7 10 460 10 453 4.07e-156 451
MS.gene49202.t1 MTR_5g072840 48.904 456 211 9 12 461 10 449 1.40e-147 429
MS.gene49202.t1 MTR_5g072820 49.455 459 202 10 12 460 10 448 1.95e-146 426
MS.gene49202.t1 MTR_5g072830 48.148 459 208 9 12 460 10 448 1.32e-144 421
MS.gene49202.t1 MTR_5g072850 47.495 459 160 10 5 461 3 382 3.92e-135 395
MS.gene49202.t1 MTR_8g059425 31.429 490 285 16 12 466 10 483 9.90e-62 209
MS.gene49202.t1 MTR_6g014040 30.515 485 289 15 12 461 10 481 2.14e-60 205
MS.gene49202.t1 MTR_2g008210 31.447 477 290 16 12 461 11 477 3.10e-60 204
MS.gene49202.t1 MTR_6g014270 31.161 491 289 15 12 466 7 484 1.53e-59 203
MS.gene49202.t1 MTR_3g008010 29.835 486 288 15 12 461 10 478 1.63e-58 200
MS.gene49202.t1 MTR_7g011470 31.942 479 275 15 12 461 10 466 1.79e-58 199
MS.gene49202.t1 MTR_6g014200 31.405 484 285 15 12 461 7 477 2.63e-58 199
MS.gene49202.t1 MTR_6g011340 30.691 492 278 16 12 461 10 480 2.94e-58 199
MS.gene49202.t1 MTR_6g014290 30.453 486 285 17 12 461 10 478 3.89e-58 199
MS.gene49202.t1 MTR_6g014300 30.146 481 279 15 12 461 12 466 9.42e-58 197
MS.gene49202.t1 MTR_6g013900 31.148 488 280 17 12 461 10 479 2.27e-57 197
MS.gene49202.t1 MTR_6g013440 29.545 484 294 14 12 461 11 481 6.00e-57 196
MS.gene49202.t1 MTR_5g464810 30.722 485 285 17 11 461 11 478 6.17e-57 196
MS.gene49202.t1 MTR_5g064240 30.722 485 285 17 11 461 11 478 6.17e-57 196
MS.gene49202.t1 MTR_6g013920 31.557 488 278 17 12 461 10 479 1.03e-56 195
MS.gene49202.t1 MTR_8g088560 30.472 466 289 13 12 460 10 457 1.06e-56 194
MS.gene49202.t1 MTR_6g013960 29.012 486 294 16 12 461 10 480 1.24e-56 195
MS.gene49202.t1 MTR_0288s0020 29.876 482 276 15 12 461 10 461 1.86e-56 194
MS.gene49202.t1 MTR_6g038240 29.263 475 291 15 12 466 11 460 2.18e-56 194
MS.gene49202.t1 MTR_0036s0220 30.083 482 290 17 12 461 12 478 3.07e-56 194
MS.gene49202.t1 MTR_7g080950 29.424 469 288 15 12 462 6 449 8.90e-56 192
MS.gene49202.t1 MTR_6g038300 28.992 476 280 14 12 460 11 455 1.23e-55 192
MS.gene49202.t1 MTR_6g014250 29.278 485 292 15 12 461 10 478 1.36e-55 192
MS.gene49202.t1 MTR_5g058320 30.372 484 281 15 9 461 7 465 1.42e-55 192
MS.gene49202.t1 MTR_6g013450 29.508 488 296 13 9 461 7 481 1.84e-55 192
MS.gene49202.t1 MTR_7g011470 31.315 479 274 15 12 461 10 462 1.94e-55 191
MS.gene49202.t1 MTR_6g014187 28.980 490 299 16 12 466 10 485 1.96e-55 192
MS.gene49202.t1 MTR_5g035580 30.085 472 270 17 12 457 13 450 2.09e-55 191
MS.gene49202.t1 MTR_3g479520 30.162 494 290 16 9 462 6 484 2.13e-55 192
MS.gene49202.t1 MTR_3g069710 29.310 464 289 10 13 461 13 452 2.26e-55 191
MS.gene49202.t1 MTR_6g014150 31.211 487 292 14 12 466 7 482 2.97e-55 191
MS.gene49202.t1 MTR_6g014020 30.165 484 291 15 12 461 10 480 3.23e-55 191
MS.gene49202.t1 MTR_6g013990 30.849 483 287 17 12 461 10 478 3.66e-55 191
MS.gene49202.t1 MTR_6g014220 29.691 485 290 15 12 461 10 478 1.00e-54 190
MS.gene49202.t1 MTR_3g479490 29.668 482 294 15 12 461 6 474 1.03e-54 190
MS.gene49202.t1 MTR_6g014310 29.278 485 294 14 12 461 11 481 1.09e-54 190
MS.gene49202.t1 MTR_6g014050 30.453 486 287 16 12 461 11 481 1.44e-54 189
MS.gene49202.t1 MTR_5g464760 29.400 483 294 15 12 461 12 480 1.63e-54 189
MS.gene49202.t1 MTR_3g079480 30.021 483 293 14 12 462 21 490 2.32e-54 189
MS.gene49202.t1 MTR_6g014170 30.453 486 279 16 12 466 10 467 1.06e-53 187
MS.gene49202.t1 MTR_6g038220 28.903 474 281 12 12 460 11 453 2.22e-53 186
MS.gene49202.t1 MTR_4g094220 29.622 503 280 18 1 457 1 475 7.27e-53 185
MS.gene49202.t1 MTR_7g080940 30.042 476 279 16 12 462 11 457 8.83e-53 184
MS.gene49202.t1 MTR_5g035560 28.926 484 278 18 12 466 11 457 8.36e-52 182
MS.gene49202.t1 MTR_1g107380 28.169 497 280 15 9 461 10 473 9.08e-52 182
MS.gene49202.t1 MTR_4g094920 29.025 472 302 12 9 461 23 480 1.66e-51 182
MS.gene49202.t1 MTR_8g083290 28.721 477 295 12 13 461 5 464 4.40e-51 180
MS.gene49202.t1 MTR_6g038200 28.936 470 291 14 10 460 9 454 5.42e-51 179
MS.gene49202.t1 MTR_3g069690 27.292 469 298 9 11 461 7 450 8.12e-51 179
MS.gene49202.t1 MTR_6g038230 28.632 468 293 15 11 460 10 454 1.33e-50 178
MS.gene49202.t1 MTR_8g083280 29.388 490 276 13 13 464 8 465 4.30e-50 177
MS.gene49202.t1 MTR_7g080900 28.512 484 297 18 1 462 1 457 4.91e-50 177
MS.gene49202.t1 MTR_6g014240 28.719 484 278 15 12 466 7 452 8.07e-50 176
MS.gene49202.t1 MTR_4g095008 28.421 475 295 16 12 461 11 465 1.18e-49 177
MS.gene49202.t1 MTR_4g064987 29.958 474 275 15 13 461 9 450 5.02e-49 174
MS.gene49202.t1 MTR_7g102460 28.629 496 303 14 9 465 6 489 3.12e-48 173
MS.gene49202.t1 MTR_3g049970 28.721 477 296 15 12 460 9 469 9.25e-48 171
MS.gene49202.t1 MTR_3g084520 28.657 499 274 18 12 460 6 472 1.14e-47 171
MS.gene49202.t1 MTR_7g080935 29.053 475 284 15 11 462 10 454 3.99e-47 169
MS.gene49202.t1 MTR_3g084540 28.953 487 289 19 12 460 6 473 1.08e-46 168
MS.gene49202.t1 MTR_0184s0040 29.065 492 272 16 6 453 15 473 1.16e-46 168
MS.gene49202.t1 MTR_0078s0190 29.065 492 272 16 6 453 15 473 1.16e-46 168
MS.gene49202.t1 MTR_3g479470 27.950 483 302 16 12 462 13 481 1.71e-46 168
MS.gene49202.t1 MTR_8g064870 27.463 477 302 13 13 460 12 473 2.53e-46 167
MS.gene49202.t1 MTR_5g098930 26.639 488 296 13 13 462 6 469 2.85e-46 167
MS.gene49202.t1 MTR_4g064987 29.325 474 272 15 13 461 9 444 2.89e-46 166
MS.gene49202.t1 MTR_8g043470 28.640 419 232 9 66 466 14 383 3.51e-46 165
MS.gene49202.t1 MTR_1g107375 28.879 464 301 12 10 460 6 453 3.80e-46 166
MS.gene49202.t1 MTR_7g070610 29.314 481 287 17 12 453 13 479 8.91e-46 166
MS.gene49202.t1 MTR_7g070660 27.708 480 305 14 12 460 11 479 9.66e-46 166
MS.gene49202.t1 MTR_7g047030 29.461 482 268 18 10 449 4 455 1.24e-45 165
MS.gene49202.t1 MTR_7g047270 29.461 482 268 18 10 449 4 455 1.24e-45 165
MS.gene49202.t1 MTR_5g016480 26.514 479 310 14 13 463 9 473 1.38e-45 165
MS.gene49202.t1 MTR_7g102490 28.144 501 301 16 9 465 6 491 1.68e-45 166
MS.gene49202.t1 MTR_8g009050 27.500 480 288 15 10 453 4 459 1.92e-45 165
MS.gene49202.t1 MTR_3g084530 27.216 485 299 17 12 460 6 472 2.59e-45 164
MS.gene49202.t1 MTR_8g009063 28.454 485 283 13 10 456 11 469 3.23e-45 164
MS.gene49202.t1 MTR_5g031840 27.542 472 308 14 10 460 3 461 6.45e-45 163
MS.gene49202.t1 MTR_7g055710 28.631 482 288 16 12 453 11 476 7.24e-45 164
MS.gene49202.t1 MTR_1g107360 29.314 481 274 15 12 457 9 458 9.97e-45 163
MS.gene49202.t1 MTR_8g009073 30.041 486 266 16 10 453 4 457 1.05e-44 162
MS.gene49202.t1 MTR_7g013240 28.540 459 287 13 12 457 6 436 1.22e-44 162
MS.gene49202.t1 MTR_8g009055 28.033 478 288 14 10 453 4 459 1.59e-44 162
MS.gene49202.t1 MTR_7g013200 27.922 462 287 12 12 457 5 436 3.36e-44 160
MS.gene49202.t1 MTR_1g107350 26.947 475 307 14 12 460 8 468 5.87e-44 161
MS.gene49202.t1 MTR_0078s0010 28.631 482 272 17 10 449 4 455 7.05e-44 160
MS.gene49202.t1 MTR_1g107365 28.184 479 291 15 12 464 45 496 2.49e-43 159
MS.gene49202.t1 MTR_8g008990 28.157 483 283 15 10 453 4 461 5.06e-43 158
MS.gene49202.t1 MTR_7g013260 28.448 464 282 15 12 457 6 437 1.00e-42 157
MS.gene49202.t1 MTR_8g006730 28.834 489 274 16 11 456 5 462 2.25e-42 156
MS.gene49202.t1 MTR_8g465670 26.915 483 296 12 11 457 6 467 2.41e-42 156
MS.gene49202.t1 MTR_2g040530 26.087 483 298 14 13 460 6 464 2.49e-42 156
MS.gene49202.t1 MTR_7g070800 28.601 479 289 16 12 453 6 468 3.08e-42 156
MS.gene49202.t1 MTR_8g064880 29.448 489 283 16 12 460 9 475 3.44e-42 156
MS.gene49202.t1 MTR_1g107315 27.521 476 305 14 11 460 7 468 4.06e-42 156
MS.gene49202.t1 MTR_7g070940 27.406 478 298 15 12 457 9 469 4.50e-42 156
MS.gene49202.t1 MTR_1g062380 27.379 515 275 16 12 462 16 495 5.64e-42 156
MS.gene49202.t1 MTR_7g117170 28.689 488 286 14 2 453 7 468 5.71e-42 155
MS.gene49202.t1 MTR_4g024020 27.677 495 304 15 9 461 6 488 8.18e-42 155
MS.gene49202.t1 MTR_0078s0060 28.333 480 283 17 10 453 4 458 1.05e-41 154
MS.gene49202.t1 MTR_5g031830 26.839 503 292 13 1 460 1 470 1.19e-41 154
MS.gene49202.t1 MTR_7g013180 28.970 466 277 18 12 453 5 440 2.10e-41 153
MS.gene49202.t1 MTR_1g019510 28.690 481 278 14 10 453 4 456 2.52e-41 154
MS.gene49202.t1 MTR_8g006710 28.893 488 270 19 13 456 7 461 2.89e-41 153
MS.gene49202.t1 MTR_8g077590 30.126 478 269 16 9 449 6 455 3.47e-41 153
MS.gene49202.t1 MTR_0184s0030 27.696 473 289 13 10 449 4 456 4.07e-41 153
MS.gene49202.t1 MTR_7g070780 27.721 487 300 16 12 460 11 483 7.37e-41 153
MS.gene49202.t1 MTR_7g070860 29.095 464 292 15 12 453 7 455 7.87e-41 152
MS.gene49202.t1 MTR_3g479610 31.511 311 183 8 171 462 15 314 7.91e-41 149
MS.gene49202.t1 MTR_8g027885 27.235 481 276 16 13 453 19 465 1.19e-40 152
MS.gene49202.t1 MTR_7g102560 26.494 502 307 14 9 466 6 489 1.30e-40 152
MS.gene49202.t1 MTR_4g485630 28.660 485 290 20 12 460 9 473 3.22e-40 150
MS.gene49202.t1 MTR_1g107285 27.601 471 302 12 13 460 9 463 3.23e-40 150
MS.gene49202.t1 MTR_5g070090 27.883 477 292 19 11 460 10 461 4.56e-40 150
MS.gene49202.t1 MTR_8g066610 27.459 488 290 16 12 457 9 474 5.83e-40 150
MS.gene49202.t1 MTR_8g008970 28.958 480 279 13 10 453 4 457 7.21e-40 153
MS.gene49202.t1 MTR_8g008970 32.296 257 156 6 205 453 535 781 3.25e-27 115
MS.gene49202.t1 MTR_7g071040 27.423 485 291 16 12 453 17 483 9.14e-40 150
MS.gene49202.t1 MTR_5g031860 25.887 479 304 11 12 460 12 469 1.15e-39 149
MS.gene49202.t1 MTR_8g027870 27.122 483 274 17 13 453 19 465 1.75e-39 149
MS.gene49202.t1 MTR_7g117405 26.761 497 290 16 12 461 12 481 1.90e-39 149
MS.gene49202.t1 MTR_5g045970 27.165 508 284 16 12 462 16 494 6.50e-39 147
MS.gene49202.t1 MTR_1g032490 26.042 480 313 13 8 460 6 470 1.10e-38 146
MS.gene49202.t1 MTR_6g023665 27.083 480 292 14 11 456 12 467 1.47e-38 146
MS.gene49202.t1 MTR_3g009510 27.495 491 283 15 11 453 4 469 2.32e-38 145
MS.gene49202.t1 MTR_7g013220 27.564 468 292 13 12 457 5 447 3.64e-38 144
MS.gene49202.t1 MTR_6g033625 27.176 471 287 15 13 449 5 453 4.32e-38 144
MS.gene49202.t1 MTR_7g102450 26.653 484 301 14 12 462 11 473 4.84e-38 145
MS.gene49202.t1 MTR_5g090580 25.889 506 288 15 11 462 4 476 6.10e-38 144
MS.gene49202.t1 MTR_7g046490 33.981 309 151 9 177 453 169 456 6.67e-38 144
MS.gene49202.t1 MTR_8g009067 27.824 478 295 12 10 457 4 461 8.03e-38 144
MS.gene49202.t1 MTR_8g012635 28.600 493 277 16 10 456 4 467 1.24e-37 143
MS.gene49202.t1 MTR_7g070740 27.198 489 286 17 12 453 11 476 1.41e-37 144
MS.gene49202.t1 MTR_2g046820 24.795 488 292 15 12 457 5 459 1.55e-37 143
MS.gene49202.t1 MTR_8g006220 26.210 496 292 13 11 457 5 475 1.66e-37 143
MS.gene49202.t1 MTR_7g070810 26.157 497 289 15 12 460 9 475 1.77e-37 143
MS.gene49202.t1 MTR_1g029540 27.292 469 288 16 17 460 19 459 1.91e-37 142
MS.gene49202.t1 MTR_6g033725 25.577 477 298 13 13 456 5 457 2.82e-37 142
MS.gene49202.t1 MTR_4g108250 26.915 483 299 14 12 453 11 480 6.13e-37 142
MS.gene49202.t1 MTR_8g009073 33.333 300 166 7 177 453 40 328 8.73e-37 138
MS.gene49202.t1 MTR_8g012650 30.909 385 209 14 114 461 111 475 9.00e-37 141
MS.gene49202.t1 MTR_2g046750 25.462 487 299 15 12 460 5 465 1.13e-36 140
MS.gene49202.t1 MTR_5g090620 25.502 498 297 17 13 462 6 477 1.22e-36 140
MS.gene49202.t1 MTR_6g005600 27.140 479 290 13 11 453 5 460 1.57e-36 140
MS.gene49202.t1 MTR_5g045960 25.349 501 300 14 12 461 9 486 2.35e-36 140
MS.gene49202.t1 MTR_8g012745 29.650 371 216 10 114 456 111 464 3.82e-36 139
MS.gene49202.t1 MTR_0891s0010 30.435 299 178 8 183 462 4 291 3.94e-36 135
MS.gene49202.t1 MTR_7g070910 26.625 477 305 14 12 453 11 477 4.02e-36 139
MS.gene49202.t1 MTR_4g008630 28.189 486 273 20 13 460 15 462 5.11e-36 139
MS.gene49202.t1 MTR_7g070930 27.140 479 300 13 12 453 14 480 5.62e-36 139
MS.gene49202.t1 MTR_6g488280 26.598 485 288 15 11 456 5 460 5.73e-36 139
MS.gene49202.t1 MTR_0428s0010 26.598 485 288 15 11 456 5 460 5.73e-36 139
MS.gene49202.t1 MTR_5g090670 26.078 510 284 16 11 462 4 478 1.40e-35 138
MS.gene49202.t1 MTR_6g014190 30.068 296 180 8 182 461 3 287 1.60e-35 134
MS.gene49202.t1 MTR_8g009067 31.579 304 174 7 177 457 51 343 2.19e-35 135
MS.gene49202.t1 MTR_0477s0010 27.762 353 202 7 124 461 3 317 3.65e-35 133
MS.gene49202.t1 MTR_6g013680 28.162 419 224 15 66 461 11 375 6.53e-35 134
MS.gene49202.t1 MTR_4g031800 24.540 489 305 12 13 462 10 473 6.55e-35 136
MS.gene49202.t1 MTR_4g485620 28.715 397 230 13 98 462 84 459 6.87e-35 135
MS.gene49202.t1 MTR_8g074550 26.815 496 289 17 11 453 7 481 7.80e-35 136
MS.gene49202.t1 MTR_5g070040 27.366 486 295 18 11 464 10 469 1.27e-34 135
MS.gene49202.t1 MTR_5g090700 23.529 493 318 12 11 462 4 478 1.48e-34 135
MS.gene49202.t1 MTR_7g102550 25.761 493 300 17 12 457 9 482 2.13e-34 134
MS.gene49202.t1 MTR_5g090660 24.699 498 296 15 11 461 4 469 2.76e-34 135
MS.gene49202.t1 MTR_5g098960 25.577 477 303 15 13 465 8 456 3.13e-34 134
MS.gene49202.t1 MTR_6g033660 25.577 477 296 13 13 454 5 457 3.40e-34 134
MS.gene49202.t1 MTR_6g014186 25.519 482 278 14 12 461 7 439 4.38e-34 133
MS.gene49202.t1 MTR_8g466240 27.673 477 286 17 9 457 5 450 4.64e-34 133
MS.gene49202.t1 MTR_0536s0020 26.176 489 292 16 13 460 19 479 5.34e-34 134
MS.gene49202.t1 MTR_4g117960 25.873 487 298 18 16 460 15 480 9.93e-34 133
MS.gene49202.t1 MTR_6g033615 26.940 464 283 16 13 449 5 439 9.96e-34 132
MS.gene49202.t1 MTR_7g102520 26.113 494 313 16 12 465 12 493 1.12e-33 133
MS.gene49202.t1 MTR_4g117950 25.720 486 291 15 16 462 10 464 1.28e-33 132
MS.gene49202.t1 MTR_5g019580 25.971 489 291 13 12 453 7 471 1.39e-33 132
MS.gene49202.t1 MTR_5g090600 25.424 472 312 13 11 462 4 455 1.71e-33 132
MS.gene49202.t1 MTR_6g033675 24.174 484 299 12 13 456 5 460 2.16e-33 132
MS.gene49202.t1 MTR_8g012730 37.229 231 113 6 252 456 80 304 2.90e-33 128
MS.gene49202.t1 MTR_5g090630 25.155 485 307 13 11 461 4 466 7.25e-33 130
MS.gene49202.t1 MTR_8g071070 24.351 501 284 15 11 457 6 465 1.09e-32 129
MS.gene49202.t1 MTR_6g014160 27.859 341 191 12 66 379 46 358 1.56e-32 128
MS.gene49202.t1 MTR_0536s0010 25.926 486 285 17 16 460 25 476 2.43e-32 129
MS.gene49202.t1 MTR_0009s0240 25.684 475 300 18 11 457 6 455 4.04e-32 128
MS.gene49202.t1 MTR_8g007585 34.146 205 118 3 266 461 196 392 5.50e-32 126
MS.gene49202.t1 MTR_5g019580 26.250 480 273 13 12 453 59 495 8.37e-32 127
MS.gene49202.t1 MTR_4g118000 25.413 484 289 16 16 460 16 466 2.08e-31 126
MS.gene49202.t1 MTR_8g012630 36.150 213 105 5 270 456 204 411 2.54e-31 125
MS.gene49202.t1 MTR_5g087620 25.147 509 300 17 12 462 10 495 3.07e-31 125
MS.gene49202.t1 MTR_8g090095 25.156 481 292 14 17 460 30 479 3.97e-31 125
MS.gene49202.t1 MTR_2g059240 24.449 499 302 16 4 461 5 469 6.17e-31 124
MS.gene49202.t1 MTR_5g067170 26.749 486 288 19 16 457 15 476 1.18e-30 124
MS.gene49202.t1 MTR_5g016660 25.458 491 299 13 9 453 7 476 2.03e-30 123
MS.gene49202.t1 MTR_2g035020 25.941 478 304 16 16 457 15 478 8.06e-30 122
MS.gene49202.t1 MTR_8g044140 25.877 456 287 17 40 457 3 445 8.29e-30 121
MS.gene49202.t1 MTR_5g090610 24.017 483 308 12 11 460 4 460 9.25e-30 121
MS.gene49202.t1 MTR_8g007650 25.221 452 294 13 10 434 5 439 1.04e-29 121
MS.gene49202.t1 MTR_8g006270 28.493 365 209 12 116 449 109 452 2.99e-29 120
MS.gene49202.t1 MTR_1g040310 24.008 479 314 16 14 457 17 480 3.32e-29 120
MS.gene49202.t1 MTR_1g019520 32.558 215 113 5 267 456 1 208 3.75e-29 114
MS.gene49202.t1 MTR_8g068330 25.111 450 299 14 12 438 8 442 4.59e-29 119
MS.gene49202.t1 MTR_8g007565 25.000 452 295 13 10 434 5 439 4.60e-29 119
MS.gene49202.t1 MTR_4g082820 24.375 480 307 14 10 457 5 460 5.80e-29 119
MS.gene49202.t1 MTR_6g035295 26.796 362 233 10 116 453 124 477 8.27e-29 119
MS.gene49202.t1 MTR_8g032950 27.249 378 230 11 113 460 118 480 9.04e-29 119
MS.gene49202.t1 MTR_2g035040 28.382 377 219 12 115 457 24 383 1.21e-28 117
MS.gene49202.t1 MTR_4g485640 30.970 268 150 9 218 457 403 663 1.71e-28 119
MS.gene49202.t1 MTR_8g006260 28.056 360 219 11 115 449 114 458 2.41e-28 117
MS.gene49202.t1 MTR_7g012120 35.185 216 115 5 266 457 266 480 2.63e-28 117
MS.gene49202.t1 MTR_5g029800 25.203 492 292 19 16 460 15 477 2.96e-28 117
MS.gene49202.t1 MTR_4g117890 24.845 483 300 16 13 457 14 471 4.26e-28 117
MS.gene49202.t1 MTR_5g072825 57.143 98 33 4 8 103 4 94 5.48e-28 107
MS.gene49202.t1 MTR_4g117980 33.180 217 120 5 268 460 266 481 6.90e-28 116
MS.gene49202.t1 MTR_6g078320 24.746 493 295 19 10 454 9 473 1.17e-27 115
MS.gene49202.t1 MTR_2g098430 23.952 501 294 19 13 457 7 476 1.43e-27 115
MS.gene49202.t1 MTR_4g128720 21.684 475 306 13 12 457 15 452 2.24e-26 111
MS.gene49202.t1 MTR_7g067120 25.000 440 284 14 8 438 5 407 2.98e-26 110
MS.gene49202.t1 MTR_4g082810 26.683 416 253 15 10 391 5 402 3.10e-26 110
MS.gene49202.t1 MTR_2g034990 27.249 378 226 12 113 457 117 478 4.45e-26 110
MS.gene49202.t1 MTR_6g035185 24.846 487 305 16 16 460 15 482 8.64e-26 110
MS.gene49202.t1 MTR_2086s0010 32.044 181 105 3 292 462 1 173 1.25e-25 103
MS.gene49202.t1 MTR_1996s0010 32.044 181 105 3 292 462 1 173 1.25e-25 103
MS.gene49202.t1 MTR_5g039900 29.104 268 146 7 218 453 221 476 2.25e-25 108
MS.gene49202.t1 MTR_7g070870 24.335 489 289 17 8 460 15 458 2.35e-25 108
MS.gene49202.t1 MTR_2g008225 24.554 448 299 17 12 438 15 444 8.65e-25 107
MS.gene49202.t1 MTR_7g039550 29.057 265 144 7 221 453 2 254 9.25e-25 103
MS.gene49202.t1 MTR_7g071050 35.354 198 106 5 266 443 227 422 1.02e-24 106
MS.gene49202.t1 MTR_4g123553 22.727 440 312 12 12 438 15 439 1.08e-24 106
MS.gene49202.t1 MTR_2g008220 24.670 454 291 16 12 438 14 443 1.59e-24 106
MS.gene49202.t1 MTR_8g068360 25.413 484 299 20 12 461 12 467 1.60e-24 106
MS.gene49202.t1 MTR_7g080960 31.250 224 105 4 243 462 294 472 3.63e-24 105
MS.gene49202.t1 MTR_5g066410 23.318 446 283 12 16 434 2 415 4.03e-24 104
MS.gene49202.t1 MTR_6g035265 29.817 218 127 7 268 460 257 473 6.19e-24 104
MS.gene49202.t1 MTR_5g027210 23.868 486 281 16 10 435 2 458 1.37e-23 103
MS.gene49202.t1 MTR_4g128690 22.436 468 308 16 12 457 15 449 3.26e-23 102
MS.gene49202.t1 MTR_5g004940 31.863 204 107 4 268 460 195 377 1.19e-22 100
MS.gene49202.t1 MTR_5g040030 25.789 380 215 11 116 453 126 480 1.71e-22 100
MS.gene49202.t1 MTR_5g066390 32.500 160 91 3 311 461 64 215 3.20e-22 95.1
MS.gene49202.t1 MTR_7g067330 24.944 445 278 15 8 438 5 407 3.40e-22 99.0
MS.gene49202.t1 MTR_6g036650 24.009 454 296 16 12 438 18 449 4.21e-22 99.0
MS.gene49202.t1 MTR_8g009840 32.710 214 110 8 268 453 311 518 4.56e-22 99.4
MS.gene49202.t1 MTR_7g470610 28.632 234 144 5 201 411 59 292 1.07e-21 95.5
MS.gene49202.t1 MTR_7g070583 28.632 234 144 5 201 411 59 292 1.07e-21 95.5
MS.gene49202.t1 MTR_4g485590 25.059 423 226 14 10 392 7 378 1.24e-21 97.1
MS.gene49202.t1 MTR_1g090270 23.348 454 296 13 12 438 15 443 2.38e-21 96.7
MS.gene49202.t1 MTR_6g013435 23.429 350 211 10 124 461 3 307 4.42e-21 94.0
MS.gene49202.t1 MTR_2g046620 23.333 450 297 16 12 438 16 440 5.62e-21 95.5
MS.gene49202.t1 MTR_8g068340 25.164 457 279 16 12 429 12 444 8.32e-21 95.1
MS.gene49202.t1 MTR_7g070995 38.346 133 73 3 329 453 6 137 1.22e-20 89.0
MS.gene49202.t1 MTR_4g077960 23.182 440 290 13 22 438 2 416 5.76e-20 92.4
MS.gene49202.t1 MTR_6g042310 22.316 475 315 15 10 460 16 460 5.89e-20 92.4
MS.gene49202.t1 MTR_1g107325 29.327 208 120 4 261 460 164 352 8.10e-20 91.3
MS.gene49202.t1 MTR_3g009490 31.868 182 97 5 296 453 3 181 1.08e-19 87.0
MS.gene49202.t1 MTR_6g014185 27.734 256 149 9 211 461 121 345 4.10e-19 89.0
MS.gene49202.t1 MTR_2g008226 28.444 225 136 8 224 435 233 445 1.58e-18 88.2
MS.gene49202.t1 MTR_6g014000 33.333 129 78 2 328 456 31 151 1.25e-17 85.5
MS.gene49202.t1 MTR_2g083490 24.348 460 292 18 8 438 4 436 2.15e-17 84.7
MS.gene49202.t1 MTR_3g435310 30.857 175 109 5 272 438 228 398 4.96e-17 83.6
MS.gene49202.t1 MTR_0536s0030 32.075 159 90 5 318 460 195 351 6.92e-17 82.4
MS.gene49202.t1 MTR_7g070760 28.856 201 105 4 212 398 28 204 7.12e-17 79.7
MS.gene49202.t1 MTR_2g083380 23.932 468 284 16 8 438 21 453 7.92e-17 83.2
MS.gene49202.t1 MTR_4g059370 24.415 299 199 6 155 438 84 370 8.21e-17 82.4
MS.gene49202.t1 MTR_0078s0200 25.157 318 211 8 10 316 4 305 1.80e-16 80.5
MS.gene49202.t1 MTR_4g079270 24.686 239 160 4 211 438 207 436 4.30e-16 80.9
MS.gene49202.t1 MTR_4g079250 25.979 281 170 9 180 438 172 436 3.77e-15 77.8
MS.gene49202.t1 MTR_8g056740 31.098 164 99 4 270 424 168 326 8.76e-15 76.3
MS.gene49202.t1 MTR_5g090690 27.907 172 85 3 268 418 189 342 2.50e-14 74.7
MS.gene49202.t1 MTR_2g014900 20.690 435 300 14 12 423 7 419 6.40e-14 73.9
MS.gene49202.t1 MTR_2g083430 23.441 465 288 20 9 438 5 436 5.73e-13 71.2
MS.gene49202.t1 MTR_8g006230 29.268 205 129 7 116 317 55 246 6.92e-13 69.3
MS.gene49202.t1 MTR_3g479620 29.697 165 102 6 12 166 6 166 5.64e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49202.t1 AT2G30150 50.968 465 210 9 1 460 1 452 6.93e-160 460
MS.gene49202.t1 AT2G30150 51.225 449 202 8 16 460 1 436 2.71e-156 451
MS.gene49202.t1 AT2G30140 50.431 464 208 10 4 460 3 451 4.16e-151 438
MS.gene49202.t1 AT2G30140 50.431 464 207 10 4 460 3 450 1.13e-150 437
MS.gene49202.t1 AT1G22400 30.120 498 280 17 12 465 13 486 3.68e-61 207
MS.gene49202.t1 AT1G05675 28.755 466 292 10 11 457 5 449 4.26e-61 206
MS.gene49202.t1 AT1G05680 29.399 466 289 11 11 457 5 449 5.90e-61 206
MS.gene49202.t1 AT1G22360 29.897 485 293 14 12 463 10 480 5.09e-60 204
MS.gene49202.t1 AT2G36970 27.859 481 295 14 12 460 10 470 6.83e-60 204
MS.gene49202.t1 AT2G31750 30.867 473 281 15 11 461 7 455 1.45e-59 202
MS.gene49202.t1 AT1G78270 31.042 480 290 17 12 461 13 481 2.13e-59 202
MS.gene49202.t1 AT2G28080 29.274 468 292 11 16 461 22 472 3.15e-59 202
MS.gene49202.t1 AT2G31750 30.867 473 281 15 11 461 7 455 4.53e-59 202
MS.gene49202.t1 AT4G01070 29.350 477 282 13 10 453 6 460 2.18e-57 197
MS.gene49202.t1 AT1G22380 30.165 484 293 14 12 463 13 483 2.82e-57 197
MS.gene49202.t1 AT1G22340 28.953 487 292 14 12 461 13 482 6.69e-57 196
MS.gene49202.t1 AT3G46660 28.970 466 292 11 8 457 10 452 1.43e-55 192
MS.gene49202.t1 AT2G43840 29.661 472 277 15 12 460 7 446 1.83e-55 191
MS.gene49202.t1 AT2G43840 29.661 472 277 15 12 460 7 446 3.32e-55 191
MS.gene49202.t1 AT1G22360 28.454 485 288 13 12 463 10 468 1.79e-54 189
MS.gene49202.t1 AT3G46670 29.185 466 289 13 8 457 5 445 2.91e-54 188
MS.gene49202.t1 AT4G15480 28.041 485 306 12 6 463 13 481 1.14e-53 187
MS.gene49202.t1 AT5G38040 29.185 466 271 14 20 460 18 449 1.10e-52 184
MS.gene49202.t1 AT2G43820 29.764 467 283 13 12 460 7 446 1.58e-52 183
MS.gene49202.t1 AT3G21560 26.708 483 314 14 1 457 1 469 1.67e-52 184
MS.gene49202.t1 AT1G01420 29.106 481 277 15 10 453 6 459 3.46e-51 181
MS.gene49202.t1 AT1G01420 29.106 481 277 15 10 453 9 462 3.56e-51 181
MS.gene49202.t1 AT5G05900 30.932 472 273 14 13 462 9 449 4.42e-51 179
MS.gene49202.t1 AT1G22370 28.750 480 300 14 12 463 13 478 6.64e-51 180
MS.gene49202.t1 AT5G59580 27.957 465 293 12 12 460 9 447 1.40e-50 178
MS.gene49202.t1 AT4G15490 28.452 478 306 15 7 461 3 467 3.29e-50 178
MS.gene49202.t1 AT2G31790 28.846 468 291 15 12 458 8 454 4.05e-50 177
MS.gene49202.t1 AT3G11340 29.032 465 285 12 13 461 10 445 5.82e-50 176
MS.gene49202.t1 AT5G38010 28.051 467 293 11 13 460 11 453 1.18e-49 176
MS.gene49202.t1 AT5G59590 27.079 469 295 11 11 460 9 449 1.19e-48 173
MS.gene49202.t1 AT4G15500 27.463 477 297 13 12 461 9 463 4.71e-48 172
MS.gene49202.t1 AT2G36800 28.916 498 287 18 12 462 12 489 1.12e-47 171
MS.gene49202.t1 AT1G24100 27.743 483 290 13 7 460 6 458 2.19e-46 167
MS.gene49202.t1 AT1G10400 28.632 475 282 17 11 453 6 455 3.41e-46 167
MS.gene49202.t1 AT2G36750 28.400 500 291 18 9 462 7 485 3.99e-46 167
MS.gene49202.t1 AT1G05560 28.423 482 283 15 8 460 3 451 4.25e-46 166
MS.gene49202.t1 AT4G15550 28.512 484 290 14 8 457 9 470 6.08e-46 166
MS.gene49202.t1 AT2G23250 29.194 459 276 16 21 460 7 435 8.62e-46 165
MS.gene49202.t1 AT1G05560 28.423 482 283 15 8 460 53 501 1.33e-45 166
MS.gene49202.t1 AT3G46680 28.172 465 288 15 12 457 9 446 1.78e-45 164
MS.gene49202.t1 AT5G05870 29.598 473 283 9 12 460 8 454 5.59e-45 163
MS.gene49202.t1 AT2G36780 27.668 506 288 20 9 462 11 490 2.47e-44 162
MS.gene49202.t1 AT2G23260 27.646 463 304 14 11 460 9 453 4.95e-44 160
MS.gene49202.t1 AT5G05880 29.449 472 277 15 13 460 9 448 9.80e-44 160
MS.gene49202.t1 AT2G26480 26.681 461 303 10 13 461 9 446 9.59e-43 157
MS.gene49202.t1 AT4G15280 24.145 497 306 11 12 462 4 475 1.27e-42 157
MS.gene49202.t1 AT3G46720 28.634 454 289 12 13 457 10 437 1.29e-42 157
MS.gene49202.t1 AT3G46650 27.015 459 279 11 13 456 11 428 1.40e-42 156
MS.gene49202.t1 AT4G15280 24.145 497 306 11 12 462 36 507 1.90e-42 157
MS.gene49202.t1 AT2G36790 28.257 499 307 17 2 462 4 489 5.69e-42 156
MS.gene49202.t1 AT3G02100 28.200 461 299 14 12 457 13 456 6.39e-42 155
MS.gene49202.t1 AT3G21800 26.078 487 304 13 13 460 6 475 6.63e-42 155
MS.gene49202.t1 AT3G46700 26.144 459 304 10 13 460 10 444 8.82e-42 154
MS.gene49202.t1 AT2G36770 26.719 509 295 17 9 465 11 493 1.50e-41 155
MS.gene49202.t1 AT5G05890 28.692 474 282 12 13 460 9 452 1.59e-41 154
MS.gene49202.t1 AT1G05530 26.458 480 294 12 12 461 5 455 1.60e-41 154
MS.gene49202.t1 AT3G21750 24.846 487 310 12 11 461 3 469 1.50e-40 151
MS.gene49202.t1 AT3G21790 25.100 498 301 15 12 460 4 478 1.87e-40 152
MS.gene49202.t1 AT2G16890 28.571 490 278 22 12 460 9 467 2.06e-40 151
MS.gene49202.t1 AT5G14860 27.801 482 301 15 12 460 8 475 2.75e-40 151
MS.gene49202.t1 AT2G29740 27.812 489 293 15 11 460 7 474 3.72e-40 150
MS.gene49202.t1 AT1G01390 28.274 481 290 12 10 457 6 464 6.63e-40 150
MS.gene49202.t1 AT3G21780 26.349 482 305 14 12 460 4 468 8.48e-40 149
MS.gene49202.t1 AT3G46690 27.571 457 291 15 13 453 10 442 1.09e-39 149
MS.gene49202.t1 AT3G21760 25.896 502 294 14 12 460 4 480 1.15e-39 149
MS.gene49202.t1 AT1G01390 28.274 481 290 12 10 457 23 481 1.27e-39 149
MS.gene49202.t1 AT5G05860 27.872 470 287 12 13 461 10 448 1.33e-39 148
MS.gene49202.t1 AT2G36760 26.305 498 305 16 9 462 11 490 1.98e-39 149
MS.gene49202.t1 AT3G53160 26.148 501 302 18 12 465 8 487 3.06e-38 145
MS.gene49202.t1 AT2G29730 24.536 485 307 15 11 461 4 463 5.87e-38 144
MS.gene49202.t1 AT5G03490 28.330 473 281 18 5 451 14 454 1.07e-37 144
MS.gene49202.t1 AT5G26310 25.773 485 286 17 12 453 7 460 3.93e-37 142
MS.gene49202.t1 AT3G53150 25.502 498 314 13 12 461 22 510 5.18e-37 142
MS.gene49202.t1 AT4G34131 26.923 494 296 17 7 457 5 476 7.00e-37 141
MS.gene49202.t1 AT3G55700 25.053 471 303 13 13 461 9 451 1.07e-36 140
MS.gene49202.t1 AT2G15480 26.210 496 298 19 12 457 10 487 2.28e-36 140
MS.gene49202.t1 AT2G29710 25.562 489 297 16 11 461 4 463 2.90e-36 139
MS.gene49202.t1 AT2G18570 26.971 482 285 12 12 453 5 459 3.06e-36 139
MS.gene49202.t1 AT3G55710 25.105 474 303 14 13 461 9 455 3.29e-36 139
MS.gene49202.t1 AT2G15490 26.955 486 297 18 12 457 7 474 3.30e-36 140
MS.gene49202.t1 AT5G17050 23.395 483 324 13 1 462 1 458 1.49e-35 137
MS.gene49202.t1 AT2G15490 26.789 489 297 18 12 457 7 477 1.58e-35 138
MS.gene49202.t1 AT2G15480 26.585 489 295 20 12 457 10 477 1.85e-35 137
MS.gene49202.t1 AT2G29750 26.844 488 304 16 11 463 7 476 2.61e-35 137
MS.gene49202.t1 AT2G16890 28.539 445 249 20 12 416 9 424 2.63e-35 136
MS.gene49202.t1 AT1G07250 32.979 282 166 7 195 461 200 473 6.18e-35 136
MS.gene49202.t1 AT1G07260 29.189 370 231 10 111 463 119 474 2.23e-34 134
MS.gene49202.t1 AT4G15260 25.936 374 218 9 125 462 6 356 4.95e-34 131
MS.gene49202.t1 AT4G34138 26.556 482 287 15 12 450 11 468 1.07e-32 130
MS.gene49202.t1 AT4G14090 25.482 467 300 14 12 457 13 452 3.00e-32 128
MS.gene49202.t1 AT5G66690 25.257 487 286 16 12 453 7 460 2.01e-31 126
MS.gene49202.t1 AT3G50740 24.540 489 293 15 12 453 7 466 2.87e-31 126
MS.gene49202.t1 AT5G12890 27.364 497 290 21 8 457 6 478 4.15e-31 125
MS.gene49202.t1 AT1G73880 24.948 485 312 15 5 461 7 467 4.85e-31 125
MS.gene49202.t1 AT5G17040 23.176 466 314 12 11 461 4 440 9.55e-31 124
MS.gene49202.t1 AT4G36770 25.667 487 263 18 12 443 4 446 1.44e-30 123
MS.gene49202.t1 AT2G18560 28.535 389 228 12 95 453 1 369 4.94e-30 120
MS.gene49202.t1 AT3G16520 26.681 476 293 16 13 457 6 456 1.05e-29 121
MS.gene49202.t1 AT5G37950 26.582 316 209 7 67 367 33 340 1.44e-29 119
MS.gene49202.t1 AT4G01070 28.972 321 199 9 10 319 6 308 2.57e-29 118
MS.gene49202.t1 AT1G07240 31.365 271 157 8 211 461 215 476 5.04e-29 119
MS.gene49202.t1 AT5G17030 23.029 482 326 14 1 462 1 457 9.64e-29 118
MS.gene49202.t1 AT3G22250 25.259 483 298 15 13 462 9 461 1.30e-28 118
MS.gene49202.t1 AT1G22370 28.115 313 193 9 171 463 8 308 2.10e-28 114
MS.gene49202.t1 AT5G37950 26.332 319 200 7 67 367 33 334 2.91e-28 115
MS.gene49202.t1 AT5G65550 22.595 447 297 14 7 425 4 429 5.79e-28 116
MS.gene49202.t1 AT1G30530 23.690 477 310 17 7 461 7 451 8.50e-28 115
MS.gene49202.t1 AT3G16520 28.467 411 245 14 13 392 6 398 1.58e-27 114
MS.gene49202.t1 AT3G16520 28.467 411 245 14 13 392 6 398 1.61e-27 114
MS.gene49202.t1 AT4G34135 26.598 485 300 15 12 457 11 478 3.59e-27 114
MS.gene49202.t1 AT1G51210 25.219 456 288 19 4 435 6 432 8.97e-27 112
MS.gene49202.t1 AT5G49690 24.554 448 293 16 12 438 10 433 8.94e-26 109
MS.gene49202.t1 AT5G17040 26.910 301 195 7 171 461 53 338 1.27e-25 107
MS.gene49202.t1 AT1G06000 23.347 484 276 18 12 460 10 433 9.65e-22 97.8
MS.gene49202.t1 AT2G22590 21.882 457 304 17 12 438 15 448 1.99e-18 88.2
MS.gene49202.t1 AT5G53990 21.300 446 300 14 12 438 6 419 2.66e-15 78.2
MS.gene49202.t1 AT3G29630 22.706 436 279 15 12 416 6 414 5.62e-15 77.4
MS.gene49202.t1 AT1G64910 25.000 216 131 5 224 416 204 411 1.89e-13 72.4
MS.gene49202.t1 AT5G54010 21.946 442 293 16 12 431 6 417 1.07e-12 70.1
MS.gene49202.t1 AT4G27570 21.461 438 284 16 12 416 7 417 1.30e-11 67.0
MS.gene49202.t1 AT4G09500 20.759 448 306 15 9 438 3 419 4.86e-11 65.1
MS.gene49202.t1 AT5G54060 23.529 442 287 16 13 419 14 439 5.19e-11 65.1
MS.gene49202.t1 AT4G27560 21.233 438 285 15 12 416 7 417 6.50e-11 64.7

Find 125 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGGAACATTTCTCTTAT+TGG 0.153236 5.4:+61365585 None:intergenic
CAATTGCACGTTGACATATT+TGG 0.193573 5.4:+61364347 None:intergenic
TAGGCTTGTTAGAAGATTTA+TGG 0.205219 5.4:-61364422 MS.gene49202:CDS
TACATGATAGCTATTTGTTT+TGG 0.213058 5.4:-61365621 MS.gene49202:CDS
TTGAACTTGATTATATAAAT+TGG 0.214972 5.4:-61364861 MS.gene49202:CDS
TGAAGCTGTTATGACTAAAA+TGG 0.236354 5.4:-61365698 MS.gene49202:CDS
AATGGTTGGTCCATCATTAT+TGG 0.246488 5.4:+61364538 None:intergenic
GTGGTGGGTGGAGGAGGATT+TGG 0.277697 5.4:+61365961 None:intergenic
AAAGATATTTGTGGGGAAAA+AGG 0.278339 5.4:-61364688 MS.gene49202:CDS
TTGTTGTTGTTGTTTGGTTT+TGG 0.303097 5.4:+61365793 None:intergenic
CAATATATTACTCTATTGTT+TGG 0.309306 5.4:+61364264 None:intergenic
GTAGGTCCAATTGTGTAAAT+TGG 0.309840 5.4:+61364937 None:intergenic
TTGAGGCTCAATTTCATATA+TGG 0.312256 5.4:+61364993 None:intergenic
AACAAGGATGTTGGGGTTGT+TGG 0.318935 5.4:+61365864 None:intergenic
TCTATACCAATTTACACAAT+TGG 0.329382 5.4:-61364943 MS.gene49202:CDS
ATCTTTGCCTCGACCTTCTT+CGG 0.344761 5.4:+61365735 None:intergenic
GGGAATAACGTTTGGGATAG+TGG 0.345862 5.4:+61365759 None:intergenic
TGTTAGAAGATTTATGGATT+TGG 0.355476 5.4:-61364416 MS.gene49202:CDS
AACTAACCTGAAGCATTTAC+TGG 0.357766 5.4:+61365484 None:intergenic
AAACGTGTGGATTACATTCC+GGG 0.361089 5.4:-61365141 MS.gene49202:CDS
ATTTGGCCGTGACTAAAATA+AGG 0.365609 5.4:+61364910 None:intergenic
TCTTCGGAGGGAATAACGTT+TGG 0.366691 5.4:+61365751 None:intergenic
CAAACGTGTGGATTACATTC+CGG 0.374925 5.4:-61365142 MS.gene49202:CDS
ATGTTCCTGTTGCGTCGTTT+TGG 0.382125 5.4:-61365573 MS.gene49202:CDS
TATAATCAAGTTCAACATCT+TGG 0.382409 5.4:+61364869 None:intergenic
AGGATTGGAAGGTTGGGTGG+AGG 0.383299 5.4:-61364495 MS.gene49202:CDS
GATTACCCAGTAAATGCTTC+AGG 0.389628 5.4:-61365490 MS.gene49202:intron
TGGTGCTTAGAGAGGCAATT+TGG 0.392268 5.4:+61364893 None:intergenic
TGCTTTCTTCATCCATGGTA+TGG 0.395710 5.4:+61365035 None:intergenic
TCTTAAACATTATCGTCGTT+TGG 0.398240 5.4:-61365524 MS.gene49202:CDS
CTTCGGAGGGAATAACGTTT+GGG 0.398881 5.4:+61365752 None:intergenic
ATAGTTGAGGATTGGAAGGT+TGG 0.402228 5.4:-61364502 MS.gene49202:CDS
ACTATATATTTACTATTCAA+TGG 0.405664 5.4:+61364520 None:intergenic
TTGGAAGGTTGGGTGGAGGG+TGG 0.409313 5.4:-61364491 MS.gene49202:CDS
ATAGGCCAAAACGACGCAAC+AGG 0.417767 5.4:+61365568 None:intergenic
ACAAAGGTAACAAGGATGTT+GGG 0.417990 5.4:+61365856 None:intergenic
CATCATGAAGTGGAAAATCT+TGG 0.420380 5.4:+61365100 None:intergenic
TCTTACCTCTCCAATAATGA+TGG 0.427830 5.4:-61364548 MS.gene49202:CDS
ATGTGAGTGGTGGGTGGAGG+AGG 0.429451 5.4:+61365955 None:intergenic
GAATCAAGTAGTTTCTCAAA+TGG 0.433865 5.4:+61365670 None:intergenic
GGATTGGAAGGTTGGGTGGA+GGG 0.435164 5.4:-61364494 MS.gene49202:CDS
CCTTTGTTGTCACGGAAGAA+TGG 0.441073 5.4:-61365840 MS.gene49202:CDS
ACTATGTGAGTGGTGGGTGG+AGG 0.445074 5.4:+61365952 None:intergenic
TGGTGGGTCGGAGTTGATGA+TGG 0.447434 5.4:+61365813 None:intergenic
AACGTTATTCCCTCCGAAGA+AGG 0.450034 5.4:-61365748 MS.gene49202:CDS
GTGGGTGGAGGAGGATTTGG+AGG 0.452077 5.4:+61365964 None:intergenic
CTAAGTGGAAAGATATTTGT+GGG 0.454247 5.4:-61364696 MS.gene49202:CDS
GGGTTGATGTGGCCTCGACC+TGG 0.457192 5.4:+61365916 None:intergenic
GTTTGCATAGGTTCATCATT+GGG 0.458429 5.4:+61365896 None:intergenic
AATCAAGTAGTTTCTCAAAT+GGG 0.466238 5.4:+61365671 None:intergenic
GAGCTAATTCTAACAATCTA+CGG 0.466397 5.4:+61365064 None:intergenic
TTTCTTGGTAATATATTACA+TGG 0.470876 5.4:-61364289 MS.gene49202:CDS
AGTTTGCATAGGTTCATCAT+TGG 0.473753 5.4:+61365895 None:intergenic
TAGTTGAGGATTGGAAGGTT+GGG 0.475505 5.4:-61364501 MS.gene49202:CDS
TGGGTGGAGGGTGGAAAAGA+AGG 0.475635 5.4:-61364482 MS.gene49202:CDS
TATGCATCAACACTCTCAAT+TGG 0.478373 5.4:+61364644 None:intergenic
TGTTGAATTCCACCCACAAT+GGG 0.479971 5.4:+61364600 None:intergenic
TATATTTACTATTCAATGGT+TGG 0.484708 5.4:+61364524 None:intergenic
GTAAATATATAGTTGAGGAT+TGG 0.491009 5.4:-61364510 MS.gene49202:CDS
TTGAGGATTGGAAGGTTGGG+TGG 0.494699 5.4:-61364498 MS.gene49202:CDS
AGGAGGATTTGGAGGTTCCA+TGG 0.502238 5.4:+61365972 None:intergenic
TATTGTGCTTTCTTCATCCA+TGG 0.508332 5.4:+61365030 None:intergenic
AACAAAGGTAACAAGGATGT+TGG 0.510094 5.4:+61365855 None:intergenic
TCTAAGTGGAAAGATATTTG+TGG 0.514263 5.4:-61364697 MS.gene49202:CDS
AGACGAATTGATGAGTTCCC+CGG 0.518887 5.4:+61365123 None:intergenic
ATCAAGTTCAACATCTTGGT+TGG 0.524790 5.4:+61364873 None:intergenic
TGTTGGGGTTGTTGGAGATG+AGG 0.528028 5.4:+61365872 None:intergenic
GTGTTGATGCATAGTGCTAT+AGG 0.529886 5.4:-61364634 MS.gene49202:CDS
ATGTGGCCTCGACCTGGGTA+TGG 0.530456 5.4:+61365922 None:intergenic
CTCAAAACATCAATTGCTTG+AGG 0.534158 5.4:+61364976 None:intergenic
AGCTAATTCTAACAATCTAC+GGG 0.535491 5.4:+61365065 None:intergenic
GGTTCATCATTGGGTTGATG+TGG 0.536548 5.4:+61365905 None:intergenic
TGGCTAGATAATCAACCCAT+TGG 0.537035 5.4:-61364841 MS.gene49202:CDS
TTGCCTCGACCTTCTTCGGA+GGG 0.545928 5.4:+61365739 None:intergenic
GGGTGGAATTCAACAAGAGA+AGG 0.548966 5.4:-61364592 MS.gene49202:CDS
TGACTAAAATAAGGTATGGT+AGG 0.550916 5.4:+61364919 None:intergenic
ATGATGAAGTGAAGGAAATG+AGG 0.551360 5.4:-61364390 MS.gene49202:CDS
TATCGTCGTTTGGAGGAAAA+CGG 0.553208 5.4:-61365514 MS.gene49202:CDS
CCTTGTTACCTTTGTTGTCA+CGG 0.554764 5.4:-61365848 MS.gene49202:CDS
TAAGAAGAGATGAAATTGCT+AGG 0.556457 5.4:-61364441 MS.gene49202:CDS
ATATATAGTTGAGGATTGGA+AGG 0.557301 5.4:-61364506 MS.gene49202:CDS
GGCTCAATTTCATATATGGA+AGG 0.559502 5.4:+61364997 None:intergenic
GCCGTGACTAAAATAAGGTA+TGG 0.560100 5.4:+61364915 None:intergenic
GACATATAGAACAGAACCAA+TGG 0.564420 5.4:+61364825 None:intergenic
TTGTTGAATTCCACCCACAA+TGG 0.566212 5.4:+61364599 None:intergenic
ACATATAGAACAGAACCAAT+GGG 0.568120 5.4:+61364826 None:intergenic
TAAACATTATCGTCGTTTGG+AGG 0.575710 5.4:-61365521 MS.gene49202:CDS
TGGAGATGAGGAGTTTGCAT+AGG 0.577125 5.4:+61365884 None:intergenic
CAAATCAATGAAAATGCGAA+TGG 0.577945 5.4:-61364769 MS.gene49202:CDS
ATCTTGGTTGGTGCTTAGAG+AGG 0.582916 5.4:+61364885 None:intergenic
CAACGTGCAATTGCAAGTGG+AGG 0.589211 5.4:-61364337 MS.gene49202:CDS
CAAAGGTAACAAGGATGTTG+GGG 0.590706 5.4:+61365857 None:intergenic
CTATCATGTATAATCACACT+CGG 0.591952 5.4:+61365634 None:intergenic
GGTTGATGTGGCCTCGACCT+GGG 0.592829 5.4:+61365917 None:intergenic
GCGAATGGTTTGCGCGAAAG+TGG 0.593640 5.4:-61364754 MS.gene49202:CDS
ATTCCCTCCGAAGAAGGTCG+AGG 0.594862 5.4:-61365742 MS.gene49202:CDS
CCGTGACAACAAAGGTAACA+AGG 0.601448 5.4:+61365848 None:intergenic
CGTAAGCTCGCATCATGAAG+TGG 0.601654 5.4:+61365090 None:intergenic
TTTGCCTCGACCTTCTTCGG+AGG 0.601667 5.4:+61365738 None:intergenic
GCCTCGACCTGGGTATGGTA+CGG 0.604546 5.4:+61365927 None:intergenic
TACGGCTACTATGTGAGTGG+TGG 0.605693 5.4:+61365945 None:intergenic
GCCGTACCATACCCAGGTCG+AGG 0.605968 5.4:-61365928 MS.gene49202:CDS
GCTCAATTTCATATATGGAA+GGG 0.606891 5.4:+61364998 None:intergenic
TCTGTTCTATATGTCTCACA+AGG 0.608612 5.4:-61364817 MS.gene49202:CDS
GAATAGTAAATATATAGTTG+AGG 0.608954 5.4:-61364515 MS.gene49202:CDS
CCATTCTTCCGTGACAACAA+AGG 0.612347 5.4:+61365840 None:intergenic
ACGGCTACTATGTGAGTGGT+GGG 0.620093 5.4:+61365946 None:intergenic
TTGGTCCATCATTATTGGAG+AGG 0.620610 5.4:+61364543 None:intergenic
AACGTGCAATTGCAAGTGGA+GGG 0.623769 5.4:-61364336 MS.gene49202:CDS
AACGTGTGGATTACATTCCG+GGG 0.625241 5.4:-61365140 MS.gene49202:CDS
TGCGTGGAGAAAGTTCTAAG+TGG 0.625771 5.4:-61364711 MS.gene49202:CDS
TGTCAACGTGCAATTGCAAG+TGG 0.626244 5.4:-61364340 MS.gene49202:CDS
TTTGGAAGATGATGAAGTGA+AGG 0.627399 5.4:-61364398 MS.gene49202:CDS
ACTAACCTGAAGCATTTACT+GGG 0.632218 5.4:+61365485 None:intergenic
TAGCTCTCAATACCATACCA+TGG 0.643975 5.4:-61365047 MS.gene49202:CDS
GCTACTATGTGAGTGGTGGG+TGG 0.649317 5.4:+61365949 None:intergenic
ATAGTAGCCGTACCATACCC+AGG 0.666075 5.4:-61365934 MS.gene49202:CDS
AAAGTGGTGTTAGATTCTTG+TGG 0.666670 5.4:-61364738 MS.gene49202:CDS
AGAAGTTGGTGACAAACGTG+TGG 0.670943 5.4:-61365154 MS.gene49202:CDS
TAAGTGGAAAGATATTTGTG+GGG 0.677407 5.4:-61364695 MS.gene49202:CDS
AGATTCTTGTGGATAATGCG+TGG 0.682535 5.4:-61364727 MS.gene49202:CDS
ACTCTCAATTGGTCACACCA+TGG 0.684804 5.4:+61364655 None:intergenic
TTGATGCATAGTGCTATAGG+TGG 0.705531 5.4:-61364631 MS.gene49202:CDS
TGGTACGGCTACTATGTGAG+TGG 0.708329 5.4:+61365942 None:intergenic
CTGTTCTATATGTCTCACAA+GGG 0.733356 5.4:-61364816 MS.gene49202:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTATATATTTACTATTCAA+TGG + chr5.4:61365729-61365748 None:intergenic 15.0%
!! TTGAACTTGATTATATAAAT+TGG - chr5.4:61365385-61365404 MS.gene49202:intron 15.0%
!!! AAAAGCTTTCAAATTATTTT+CGG + chr5.4:61365940-61365959 None:intergenic 15.0%
!!! CTTTTTTTTGACTAAATTTA+AGG - chr5.4:61364790-61364809 MS.gene49202:CDS 15.0%
!! CTAAAAAATGCAAGTAAAAT+GGG + chr5.4:61364909-61364928 None:intergenic 20.0%
!! GAATAGTAAATATATAGTTG+AGG - chr5.4:61365731-61365750 MS.gene49202:CDS 20.0%
!! TATATTTACTATTCAATGGT+TGG + chr5.4:61365725-61365744 None:intergenic 20.0%
!!! AATAATTTGAAAGCTTTTCT+TGG - chr5.4:61365942-61365961 MS.gene49202:CDS 20.0%
!!! TTTCTTGGTAATATATTACA+TGG - chr5.4:61365957-61365976 MS.gene49202:CDS 20.0%
! AATCAAGTAGTTTCTCAAAT+GGG + chr5.4:61364578-61364597 None:intergenic 25.0%
! CCTAAAAAATGCAAGTAAAA+TGG + chr5.4:61364910-61364929 None:intergenic 25.0%
! GTAAATATATAGTTGAGGAT+TGG - chr5.4:61365736-61365755 MS.gene49202:CDS 25.0%
! TATAATCAAGTTCAACATCT+TGG + chr5.4:61365380-61365399 None:intergenic 25.0%
! TCTATACCAATTTACACAAT+TGG - chr5.4:61365303-61365322 MS.gene49202:intron 25.0%
! TGAAGTGGTAAATAAAAGAA+AGG + chr5.4:61364818-61364837 None:intergenic 25.0%
! TGTTAGAAGATTTATGGATT+TGG - chr5.4:61365830-61365849 MS.gene49202:CDS 25.0%
! TTAGGAAAAATTCACAAACT+TGG - chr5.4:61364925-61364944 MS.gene49202:CDS 25.0%
!! AGTGTTTTCTTTCTTTCTAA+AGG + chr5.4:61364880-61364899 None:intergenic 25.0%
!! TACATGATAGCTATTTGTTT+TGG - chr5.4:61364625-61364644 MS.gene49202:CDS 25.0%
!! TAGTTTATGGACTAAATCAA+TGG - chr5.4:61365010-61365029 MS.gene49202:CDS 25.0%
!!! AAATGTTTTTTCTCTTGAAG+TGG + chr5.4:61364833-61364852 None:intergenic 25.0%
!!! ACATGATAGCTATTTGTTTT+GGG - chr5.4:61364626-61364645 MS.gene49202:CDS 25.0%
!!! CCATTTTACTTGCATTTTTT+AGG - chr5.4:61364907-61364926 MS.gene49202:CDS 25.0%
AAAGATATTTGTGGGGAAAA+AGG - chr5.4:61365558-61365577 MS.gene49202:CDS 30.0%
AACAGGAACATTTCTCTTAT+TGG + chr5.4:61364664-61364683 None:intergenic 30.0%
AACTATACCTCTCTCTAATT+CGG + chr5.4:61364995-61365014 None:intergenic 30.0%
AAGATATTTGTGGGGAAAAA+GGG - chr5.4:61365559-61365578 MS.gene49202:CDS 30.0%
ACATATAGAACAGAACCAAT+GGG + chr5.4:61365423-61365442 None:intergenic 30.0%
ACATTTATGATTTAGCTACC+TGG - chr5.4:61364847-61364866 MS.gene49202:CDS 30.0%
AGCTAATTCTAACAATCTAC+GGG + chr5.4:61365184-61365203 None:intergenic 30.0%
ATATATAGTTGAGGATTGGA+AGG - chr5.4:61365740-61365759 MS.gene49202:CDS 30.0%
CAAATCAATGAAAATGCGAA+TGG - chr5.4:61365477-61365496 MS.gene49202:intron 30.0%
CACACAAAACACTTAATAGA+TGG + chr5.4:61365053-61365072 None:intergenic 30.0%
CATTTATGATTTAGCTACCT+GGG - chr5.4:61364848-61364867 MS.gene49202:CDS 30.0%
CTAAGTGGAAAGATATTTGT+GGG - chr5.4:61365550-61365569 MS.gene49202:CDS 30.0%
CTATCATGTATAATCACACT+CGG + chr5.4:61364615-61364634 None:intergenic 30.0%
GAATCAAGTAGTTTCTCAAA+TGG + chr5.4:61364579-61364598 None:intergenic 30.0%
GAGCTAATTCTAACAATCTA+CGG + chr5.4:61365185-61365204 None:intergenic 30.0%
GCTCAATTTCATATATGGAA+GGG + chr5.4:61365251-61365270 None:intergenic 30.0%
TAAGAAGAGATGAAATTGCT+AGG - chr5.4:61365805-61365824 MS.gene49202:CDS 30.0%
TAAGTGGAAAGATATTTGTG+GGG - chr5.4:61365551-61365570 MS.gene49202:CDS 30.0%
TCTAAGTGGAAAGATATTTG+TGG - chr5.4:61365549-61365568 MS.gene49202:CDS 30.0%
TCTTAAACATTATCGTCGTT+TGG - chr5.4:61364722-61364741 MS.gene49202:CDS 30.0%
TGAAGCTGTTATGACTAAAA+TGG - chr5.4:61364548-61364567 MS.gene49202:CDS 30.0%
TGACTAAAATAAGGTATGGT+AGG + chr5.4:61365330-61365349 None:intergenic 30.0%
TTGAGGCTCAATTTCATATA+TGG + chr5.4:61365256-61365275 None:intergenic 30.0%
! TTAGAGAGAGGTATAGTTTA+TGG - chr5.4:61364997-61365016 MS.gene49202:CDS 30.0%
! TTGATGTTGTTGTTGTTGTT+TGG + chr5.4:61364462-61364481 None:intergenic 30.0%
!! TAGGCTTGTTAGAAGATTTA+TGG - chr5.4:61365824-61365843 MS.gene49202:CDS 30.0%
!!! ACCATACCTTATTTTAGTCA+CGG - chr5.4:61365330-61365349 MS.gene49202:intron 30.0%
!!! TTGTTGTTGTTGTTTGGTTT+TGG + chr5.4:61364456-61364475 None:intergenic 30.0%
AACAAAGGTAACAAGGATGT+TGG + chr5.4:61364394-61364413 None:intergenic 35.0%
ACAAAGGTAACAAGGATGTT+GGG + chr5.4:61364393-61364412 None:intergenic 35.0%
AGTTTGCATAGGTTCATCAT+TGG + chr5.4:61364354-61364373 None:intergenic 35.0%
ATCAAGTTCAACATCTTGGT+TGG + chr5.4:61365376-61365395 None:intergenic 35.0%
ATGATGAAGTGAAGGAAATG+AGG - chr5.4:61365856-61365875 MS.gene49202:CDS 35.0%
ATTTGGCCGTGACTAAAATA+AGG + chr5.4:61365339-61365358 None:intergenic 35.0%
CAATTGCACGTTGACATATT+TGG + chr5.4:61365902-61365921 None:intergenic 35.0%
CATCATGAAGTGGAAAATCT+TGG + chr5.4:61365149-61365168 None:intergenic 35.0%
CTCAAAACATCAATTGCTTG+AGG + chr5.4:61365273-61365292 None:intergenic 35.0%
CTGTTCTATATGTCTCACAA+GGG - chr5.4:61365430-61365449 MS.gene49202:intron 35.0%
GACATATAGAACAGAACCAA+TGG + chr5.4:61365424-61365443 None:intergenic 35.0%
GGCTCAATTTCATATATGGA+AGG + chr5.4:61365252-61365271 None:intergenic 35.0%
GTAGGTCCAATTGTGTAAAT+TGG + chr5.4:61365312-61365331 None:intergenic 35.0%
GTTTGCATAGGTTCATCATT+GGG + chr5.4:61364353-61364372 None:intergenic 35.0%
TAAAATGCTGCAACAGAAGT+TGG - chr5.4:61365078-61365097 MS.gene49202:CDS 35.0%
TAAACATTATCGTCGTTTGG+AGG - chr5.4:61364725-61364744 MS.gene49202:CDS 35.0%
TATGCATCAACACTCTCAAT+TGG + chr5.4:61365605-61365624 None:intergenic 35.0%
TATTGTGCTTTCTTCATCCA+TGG + chr5.4:61365219-61365238 None:intergenic 35.0%
TCTGTTCTATATGTCTCACA+AGG - chr5.4:61365429-61365448 MS.gene49202:intron 35.0%
TCTTACCTCTCCAATAATGA+TGG - chr5.4:61365698-61365717 MS.gene49202:CDS 35.0%
TTTGGAAGATGATGAAGTGA+AGG - chr5.4:61365848-61365867 MS.gene49202:CDS 35.0%
! AAAGTGGTGTTAGATTCTTG+TGG - chr5.4:61365508-61365527 MS.gene49202:CDS 35.0%
! AACTAACCTGAAGCATTTAC+TGG + chr5.4:61364765-61364784 None:intergenic 35.0%
! AATGGTTGGTCCATCATTAT+TGG + chr5.4:61365711-61365730 None:intergenic 35.0%
! ACTAACCTGAAGCATTTACT+GGG + chr5.4:61364764-61364783 None:intergenic 35.0%
! ATAGTGCTATAGGTGGTTTT+TGG - chr5.4:61365622-61365641 MS.gene49202:CDS 35.0%
! CTTTCTAAAGGAATATTCCC+AGG + chr5.4:61364868-61364887 None:intergenic 35.0%
!!! AAAAAGGGTTTGTTTTGCCA+TGG - chr5.4:61365574-61365593 MS.gene49202:CDS 35.0%
!!! ACAAGAGAAGGTTTGTTTTG+TGG - chr5.4:61365666-61365685 MS.gene49202:CDS 35.0%
!!! TGTTGTTGTTTGGTTTTGGT+GGG + chr5.4:61364452-61364471 None:intergenic 35.0%
!!! TTGTTGTTGTTTGGTTTTGG+TGG + chr5.4:61364453-61364472 None:intergenic 35.0%
ACAAACTTGGTATGCTTCAG+GGG - chr5.4:61364938-61364957 MS.gene49202:CDS 40.0%
AGATTCTTGTGGATAATGCG+TGG - chr5.4:61365519-61365538 MS.gene49202:CDS 40.0%
ATAGTTGAGGATTGGAAGGT+TGG - chr5.4:61365744-61365763 MS.gene49202:CDS 40.0%
CAAAGGTAACAAGGATGTTG+GGG + chr5.4:61364392-61364411 None:intergenic 40.0%
CACAAACTTGGTATGCTTCA+GGG - chr5.4:61364937-61364956 MS.gene49202:CDS 40.0%
GATTACCCAGTAAATGCTTC+AGG - chr5.4:61364756-61364775 MS.gene49202:CDS 40.0%
GCCGTGACTAAAATAAGGTA+TGG + chr5.4:61365334-61365353 None:intergenic 40.0%
TAGCTCTCAATACCATACCA+TGG - chr5.4:61365199-61365218 MS.gene49202:intron 40.0%
TAGTTGAGGATTGGAAGGTT+GGG - chr5.4:61365745-61365764 MS.gene49202:CDS 40.0%
TATCGTCGTTTGGAGGAAAA+CGG - chr5.4:61364732-61364751 MS.gene49202:CDS 40.0%
TCACAAACTTGGTATGCTTC+AGG - chr5.4:61364936-61364955 MS.gene49202:CDS 40.0%
TGCTTTCTTCATCCATGGTA+TGG + chr5.4:61365214-61365233 None:intergenic 40.0%
TGGCTAGATAATCAACCCAT+TGG - chr5.4:61365405-61365424 MS.gene49202:intron 40.0%
TGTTGAATTCCACCCACAAT+GGG + chr5.4:61365649-61365668 None:intergenic 40.0%
TTAGGAACCGAATTAGAGAG+AGG - chr5.4:61364985-61365004 MS.gene49202:CDS 40.0%
TTGATGCATAGTGCTATAGG+TGG - chr5.4:61365615-61365634 MS.gene49202:CDS 40.0%
TTGGTCCATCATTATTGGAG+AGG + chr5.4:61365706-61365725 None:intergenic 40.0%
TTGTTGAATTCCACCCACAA+TGG + chr5.4:61365650-61365669 None:intergenic 40.0%
! AAACGTGTGGATTACATTCC+GGG - chr5.4:61365105-61365124 MS.gene49202:CDS 40.0%
! CAAACGTGTGGATTACATTC+CGG - chr5.4:61365104-61365123 MS.gene49202:CDS 40.0%
! CCTTGTTACCTTTGTTGTCA+CGG - chr5.4:61364398-61364417 MS.gene49202:CDS 40.0%
! CTCACAAGGGAGTTTTCTTT+CGG - chr5.4:61365443-61365462 MS.gene49202:intron 40.0%
! GTGTTGATGCATAGTGCTAT+AGG - chr5.4:61365612-61365631 MS.gene49202:CDS 40.0%
AACAAGGATGTTGGGGTTGT+TGG + chr5.4:61364385-61364404 None:intergenic 45.0%
AACGTGCAATTGCAAGTGGA+GGG - chr5.4:61365910-61365929 MS.gene49202:CDS 45.0%
AACGTTATTCCCTCCGAAGA+AGG - chr5.4:61364498-61364517 MS.gene49202:CDS 45.0%
ACTCTCAATTGGTCACACCA+TGG + chr5.4:61365594-61365613 None:intergenic 45.0%
AGAAAAAACGACCCCGACAT+AGG + chr5.4:61364699-61364718 None:intergenic 45.0%
AGACGAATTGATGAGTTCCC+CGG + chr5.4:61365126-61365145 None:intergenic 45.0%
ATCTTTGCCTCGACCTTCTT+CGG + chr5.4:61364514-61364533 None:intergenic 45.0%
CCATTCTTCCGTGACAACAA+AGG + chr5.4:61364409-61364428 None:intergenic 45.0%
CCGTGACAACAAAGGTAACA+AGG + chr5.4:61364401-61364420 None:intergenic 45.0%
CTTCGGAGGGAATAACGTTT+GGG + chr5.4:61364497-61364516 None:intergenic 45.0%
GGGTGGAATTCAACAAGAGA+AGG - chr5.4:61365654-61365673 MS.gene49202:CDS 45.0%
TCTTCGGAGGGAATAACGTT+TGG + chr5.4:61364498-61364517 None:intergenic 45.0%
TGGAGATGAGGAGTTTGCAT+AGG + chr5.4:61364365-61364384 None:intergenic 45.0%
TGGTGCTTAGAGAGGCAATT+TGG + chr5.4:61365356-61365375 None:intergenic 45.0%
TGTCAACGTGCAATTGCAAG+TGG - chr5.4:61365906-61365925 MS.gene49202:CDS 45.0%
! AACGTGTGGATTACATTCCG+GGG - chr5.4:61365106-61365125 MS.gene49202:CDS 45.0%
! ATCTTGGTTGGTGCTTAGAG+AGG + chr5.4:61365364-61365383 None:intergenic 45.0%
! ATGTTCCTGTTGCGTCGTTT+TGG - chr5.4:61364673-61364692 MS.gene49202:CDS 45.0%
! CCTTTGTTGTCACGGAAGAA+TGG - chr5.4:61364406-61364425 MS.gene49202:CDS 45.0%
! GGGAATAACGTTTGGGATAG+TGG + chr5.4:61364490-61364509 None:intergenic 45.0%
!! AGAAGTTGGTGACAAACGTG+TGG - chr5.4:61365092-61365111 MS.gene49202:CDS 45.0%
!! GGTTCATCATTGGGTTGATG+TGG + chr5.4:61364344-61364363 None:intergenic 45.0%
!! TGCGTGGAGAAAGTTCTAAG+TGG - chr5.4:61365535-61365554 MS.gene49202:CDS 45.0%
!!! GTGGTTTTTGGTCCCATTGT+GGG - chr5.4:61365634-61365653 MS.gene49202:CDS 45.0%
!!! GTTGTTTGGTTTTGGTGGGT+CGG + chr5.4:61364448-61364467 None:intergenic 45.0%
!! ATTATATTGATATATAATTT+AGG - chr5.4:61364967-61364986 MS.gene49202:CDS 5.0%
ACGGCTACTATGTGAGTGGT+GGG + chr5.4:61364303-61364322 None:intergenic 50.0%
ATAGGCCAAAACGACGCAAC+AGG + chr5.4:61364681-61364700 None:intergenic 50.0%
ATAGTAGCCGTACCATACCC+AGG - chr5.4:61364312-61364331 MS.gene49202:CDS 50.0%
CAACGTGCAATTGCAAGTGG+AGG - chr5.4:61365909-61365928 MS.gene49202:CDS 50.0%
CGTAAGCTCGCATCATGAAG+TGG + chr5.4:61365159-61365178 None:intergenic 50.0%
TACGGCTACTATGTGAGTGG+TGG + chr5.4:61364304-61364323 None:intergenic 50.0%
TGGTACGGCTACTATGTGAG+TGG + chr5.4:61364307-61364326 None:intergenic 50.0%
TGTTGGGGTTGTTGGAGATG+AGG + chr5.4:61364377-61364396 None:intergenic 50.0%
TTGAGGATTGGAAGGTTGGG+TGG - chr5.4:61365748-61365767 MS.gene49202:CDS 50.0%
!! TGCGTCGTTTTGGCCTATGT+CGG - chr5.4:61364683-61364702 MS.gene49202:CDS 50.0%
!!! GGTGGTTTTTGGTCCCATTG+TGG - chr5.4:61365633-61365652 MS.gene49202:CDS 50.0%
!!! GTTTTTGGTCCCATTGTGGG+TGG - chr5.4:61365637-61365656 MS.gene49202:CDS 50.0%
AGGATTGGAAGGTTGGGTGG+AGG - chr5.4:61365751-61365770 MS.gene49202:CDS 55.0%
ATTCCCTCCGAAGAAGGTCG+AGG - chr5.4:61364504-61364523 MS.gene49202:CDS 55.0%
GGATTGGAAGGTTGGGTGGA+GGG - chr5.4:61365752-61365771 MS.gene49202:CDS 55.0%
TGGGTGGAGGGTGGAAAAGA+AGG - chr5.4:61365764-61365783 MS.gene49202:CDS 55.0%
TTGCCTCGACCTTCTTCGGA+GGG + chr5.4:61364510-61364529 None:intergenic 55.0%
TTTGCCTCGACCTTCTTCGG+AGG + chr5.4:61364511-61364530 None:intergenic 55.0%
! GCGAATGGTTTGCGCGAAAG+TGG - chr5.4:61365492-61365511 MS.gene49202:CDS 55.0%
! GCTACTATGTGAGTGGTGGG+TGG + chr5.4:61364300-61364319 None:intergenic 55.0%
!! ACTATGTGAGTGGTGGGTGG+AGG + chr5.4:61364297-61364316 None:intergenic 55.0%
!! CGTCGTTTTGGCCTATGTCG+GGG - chr5.4:61364685-61364704 MS.gene49202:CDS 55.0%
!! GCGTCGTTTTGGCCTATGTC+GGG - chr5.4:61364684-61364703 MS.gene49202:CDS 55.0%
!! TGGTGGGTCGGAGTTGATGA+TGG + chr5.4:61364436-61364455 None:intergenic 55.0%
ATGTGGCCTCGACCTGGGTA+TGG + chr5.4:61364327-61364346 None:intergenic 60.0%
GCCTCGACCTGGGTATGGTA+CGG + chr5.4:61364322-61364341 None:intergenic 60.0%
GTGGGTGGAGGAGGATTTGG+AGG + chr5.4:61364285-61364304 None:intergenic 60.0%
TTGGAAGGTTGGGTGGAGGG+TGG - chr5.4:61365755-61365774 MS.gene49202:CDS 60.0%
! GGTTGATGTGGCCTCGACCT+GGG + chr5.4:61364332-61364351 None:intergenic 60.0%
!! ATGTGAGTGGTGGGTGGAGG+AGG + chr5.4:61364294-61364313 None:intergenic 60.0%
!! GTGGTGGGTGGAGGAGGATT+TGG + chr5.4:61364288-61364307 None:intergenic 60.0%
GCCGTACCATACCCAGGTCG+AGG - chr5.4:61364318-61364337 MS.gene49202:CDS 65.0%
!! GGGTTGATGTGGCCTCGACC+TGG + chr5.4:61364333-61364352 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 61364276 61365992 61364276 ID=MS.gene49202
chr5.4 mRNA 61364276 61365992 61364276 ID=MS.gene49202.t1;Parent=MS.gene49202
chr5.4 exon 61365491 61365992 61365491 ID=MS.gene49202.t1.exon1;Parent=MS.gene49202.t1
chr5.4 CDS 61365491 61365992 61365491 ID=cds.MS.gene49202.t1;Parent=MS.gene49202.t1
chr5.4 exon 61364276 61365174 61364276 ID=MS.gene49202.t1.exon2;Parent=MS.gene49202.t1
chr5.4 CDS 61364276 61365174 61364276 ID=cds.MS.gene49202.t1;Parent=MS.gene49202.t1
Gene Sequence

>MS.gene49202

ATGGAACCTCCAAATCCTCCTCCACCCACCACTCACATAGTAGCCGTACCATACCCAGGTCGAGGCCACATCAACCCAATGATGAACCTATGCAAACTCCTCATCTCCAACAACCCCAACATCCTTGTTACCTTTGTTGTCACGGAAGAATGGCTCACCATCATCAACTCCGACCCACCAAAACCAAACAACAACAACAACATCAAATTCGCCACTATCCCAAACGTTATTCCCTCCGAAGAAGGTCGAGGCAAAGATTTTCTTAATTTTCTTGAAGCTGTTATGACTAAAATGGAAGACCCATTTGAGAAACTACTTGATTCGTTTGAGAGAGTGCCGAGTGTGATTATACATGATAGCTATTTGTTTTGGGTTATAAGAGTTGCCAATAAGAGAAATGTTCCTGTTGCGTCGTTTTGGCCTATGTCGGGGTCGTTTTTTCTTGTTCTTAAACATTATCGTCGTTTGGAGGAAAACGGTGATTACCCAGTAAATGCTTCAGGTTAGTTACTTTCTTTTTTTTGACTAAATTTAAGGTACCTTTCTTTTATTTACCACTTCAAGAGAAAAAACATTTATGATTTAGCTACCTGGGAATATTCCTTTAGAAAGAAAGAAAACACTTTTAGTCCCATTTTACTTGCATTTTTTAGGAAAAATTCACAAACTTGGTATGCTTCAGGGGCTACTTATTATATTGATATATAATTTAGGAACCGAATTAGAGAGAGGTATAGTTTATGGACTAAATCAATGGTTTATTCGACACATATTCCATCTATTAAGTGTTTTGTGTGTTGTTTAAAATGCTGCAACAGAAGTTGGTGACAAACGTGTGGATTACATTCCGGGGAACTCATCAATTCGTCTCCAAGATTTTCCACTTCATGATGCGAGCTTACGCACCCGTAGATTGTTAGAATTAGCTCTCAATACCATACCATGGATGAAGAAAGCACAATATCTATTATTCCCTTCCATATATGAAATTGAGCCTCAAGCAATTGATGTTTTGAGAGAAGAATTTTCTATACCAATTTACACAATTGGACCTACCATACCTTATTTTAGTCACGGCCAAATTGCCTCTCTAAGCACCAACCAAGATGTTGAACTTGATTATATAAATTGGCTAGATAATCAACCCATTGGTTCTGTTCTATATGTCTCACAAGGGAGTTTTCTTTCGGTTTCAAGCGAACAAATCAATGAAAATGCGAATGGTTTGCGCGAAAGTGGTGTTAGATTCTTGTGGATAATGCGTGGAGAAAGTTCTAAGTGGAAAGATATTTGTGGGGAAAAAGGGTTTGTTTTGCCATGGTGTGACCAATTGAGAGTGTTGATGCATAGTGCTATAGGTGGTTTTTGGTCCCATTGTGGGTGGAATTCAACAAGAGAAGGTTTGTTTTGTGGTGTGTCTTTTCTTACCTCTCCAATAATGATGGACCAACCATTGAATAGTAAATATATAGTTGAGGATTGGAAGGTTGGGTGGAGGGTGGAAAAGAAGGTTAAAGATGATGTTTTGATAAGAAGAGATGAAATTGCTAGGCTTGTTAGAAGATTTATGGATTTGGAAGATGATGAAGTGAAGGAAATGAGGAAAAGAGCAAGAGAGCTTCGCCAAATATGTCAACGTGCAATTGCAAGTGGAGGGTCATCCGAAAATAATTTGAAAGCTTTTCTTGGTAATATATTACATGGATCCAAACAATAG
Protein sequence

>MS.gene49202.t1

MEPPNPPPPTTHIVAVPYPGRGHINPMMNLCKLLISNNPNILVTFVVTEEWLTIINSDPPKPNNNNNIKFATIPNVIPSEEGRGKDFLNFLEAVMTKMEDPFEKLLDSFERVPSVIIHDSYLFWVIRVANKRNVPVASFWPMSGSFFLVLKHYRRLEENGDYPVNASEVGDKRVDYIPGNSSIRLQDFPLHDASLRTRRLLELALNTIPWMKKAQYLLFPSIYEIEPQAIDVLREEFSIPIYTIGPTIPYFSHGQIASLSTNQDVELDYINWLDNQPIGSVLYVSQGSFLSVSSEQINENANGLRESGVRFLWIMRGESSKWKDICGEKGFVLPWCDQLRVLMHSAIGGFWSHCGWNSTREGLFCGVSFLTSPIMMDQPLNSKYIVEDWKVGWRVEKKVKDDVLIRRDEIARLVRRFMDLEDDEVKEMRKRARELRQICQRAIASGGSSENNLKAFLGNILHGSKQ