Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54606.t1 | XP_013456230.1 | 93 | 588 | 17 | 1 | 1 | 564 | 1 | 588 | 7.40E-307 | 1062.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54606.t1 | Q9LXU9 | 51.9 | 567 | 227 | 12 | 24 | 562 | 12 | 560 | 4.2e-141 | 503.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54606.t1 | A0A072ULJ6 | 93.0 | 588 | 17 | 1 | 1 | 564 | 1 | 588 | 5.3e-307 | 1062.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene54606 | 0.804916 | 1.72E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene54606 | 0.809688 | 1.67E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene54606 | 0.826912 | 2.09E-54 | -1.69E-46 |
| MS.gene049993 | MS.gene54606 | 0.851303 | 9.69E-61 | -1.69E-46 |
| MS.gene050397 | MS.gene54606 | 0.858677 | 6.99E-63 | -1.69E-46 |
| MS.gene050406 | MS.gene54606 | 0.807389 | 5.18E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene54606 | -0.828528 | 8.55E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene54606 | 0.837881 | 4.00E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene54606 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene54606 | 0.846611 | 1.95E-59 | -1.69E-46 |
| MS.gene050670 | MS.gene54606 | 0.823067 | 1.69E-53 | -1.69E-46 |
| MS.gene050971 | MS.gene54606 | 0.812446 | 4.22E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene54606 | 0.802355 | 5.83E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene54606 | 0.824708 | 6.97E-54 | -1.69E-46 |
| MS.gene051582 | MS.gene54606 | 0.812678 | 3.76E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene54606 | 0.84209 | 3.20E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene54606 | 0.835515 | 1.60E-56 | -1.69E-46 |
| MS.gene052011 | MS.gene54606 | -0.871248 | 7.90E-67 | -1.69E-46 |
| MS.gene052077 | MS.gene54606 | 0.860923 | 1.47E-63 | -1.69E-46 |
| MS.gene052253 | MS.gene54606 | 0.866687 | 2.38E-65 | -1.69E-46 |
| MS.gene052310 | MS.gene54606 | 0.801271 | 9.74E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene54606 | 0.828656 | 7.96E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene54606 | 0.868777 | 5.07E-66 | -1.69E-46 |
| MS.gene054183 | MS.gene54606 | 0.846007 | 2.85E-59 | -1.69E-46 |
| MS.gene054349 | MS.gene54606 | 0.804178 | 2.45E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene54606 | 0.837697 | 4.46E-57 | -1.69E-46 |
| MS.gene054918 | MS.gene54606 | 0.815739 | 7.92E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene54606 | 0.805932 | 1.05E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene54606 | 0.858436 | 8.25E-63 | -1.69E-46 |
| MS.gene055116 | MS.gene54606 | 0.826959 | 2.04E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene54606 | 0.80906 | 2.28E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene54606 | 0.804444 | 2.15E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene54606 | 0.824993 | 5.97E-54 | -1.69E-46 |
| MS.gene05553 | MS.gene54606 | 0.819761 | 9.80E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene54606 | 0.810322 | 1.22E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene54606 | -0.807646 | 4.57E-50 | -1.69E-46 |
| MS.gene056337 | MS.gene54606 | 0.895093 | 1.33E-75 | -1.69E-46 |
| MS.gene056451 | MS.gene54606 | 0.830212 | 3.34E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene54606 | 0.825144 | 5.50E-54 | -1.69E-46 |
| MS.gene056659 | MS.gene54606 | 0.807262 | 5.51E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene54606 | -0.834291 | 3.26E-56 | -1.69E-46 |
| MS.gene056979 | MS.gene54606 | 0.833229 | 6.01E-56 | -1.69E-46 |
| MS.gene05702 | MS.gene54606 | 0.834575 | 2.77E-56 | -1.69E-46 |
| MS.gene057245 | MS.gene54606 | 0.813208 | 2.87E-51 | -1.69E-46 |
| MS.gene057476 | MS.gene54606 | 0.829471 | 5.05E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene54606 | 0.826735 | 2.30E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene54606 | 0.801024 | 1.09E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene54606 | 0.831375 | 1.73E-55 | -1.69E-46 |
| MS.gene05811 | MS.gene54606 | 0.817921 | 2.57E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene54606 | 0.81199 | 5.31E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene54606 | 0.814633 | 1.39E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene54606 | 0.802535 | 5.36E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene54606 | 0.824574 | 7.50E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene54606 | 0.834739 | 2.52E-56 | -1.69E-46 |
| MS.gene058928 | MS.gene54606 | 0.801724 | 7.87E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene54606 | 0.852825 | 3.58E-61 | -1.69E-46 |
| MS.gene059285 | MS.gene54606 | 0.838652 | 2.53E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene54606 | 0.833607 | 4.84E-56 | -1.69E-46 |
| MS.gene059511 | MS.gene54606 | 0.815607 | 8.48E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene54606 | 0.820984 | 5.14E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene54606 | 0.800754 | 1.24E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene54606 | 0.848623 | 5.45E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene54606 | 0.828618 | 8.14E-55 | -1.69E-46 |
| MS.gene060247 | MS.gene54606 | 0.808392 | 3.17E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene54606 | 0.809157 | 2.17E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene54606 | 0.86313 | 3.10E-64 | -1.69E-46 |
| MS.gene061114 | MS.gene54606 | -0.826433 | 2.72E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54606.t1 | MTR_4g066010 | 93.027 | 588 | 17 | 1 | 1 | 564 | 1 | 588 | 0.0 | 1123 |
| MS.gene54606.t1 | MTR_2g098420 | 66.444 | 599 | 136 | 17 | 1 | 553 | 1 | 580 | 0.0 | 729 |
| MS.gene54606.t1 | MTR_8g106210 | 39.198 | 324 | 175 | 5 | 241 | 560 | 150 | 455 | 7.52e-72 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54606.t1 | AT5G12900 | 50.600 | 583 | 210 | 14 | 24 | 562 | 12 | 560 | 0.0 | 527 |
| MS.gene54606.t1 | AT1G12330 | 34.459 | 444 | 247 | 11 | 126 | 559 | 63 | 472 | 1.80e-69 | 233 |
Find 120 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGACGGTCTATGAATTT+TGG | 0.116469 | 4.3:+38027483 | None:intergenic |
| GTATTACCACTACTCTAAAT+TGG | 0.202218 | 4.3:-38027335 | MS.gene54606:CDS |
| TTTCTTCAATGTTGTTTATA+AGG | 0.223578 | 4.3:+38027667 | None:intergenic |
| TCTCGTCATTCGTTGCTCTT+AGG | 0.269047 | 4.3:-38027443 | MS.gene54606:CDS |
| AAACTGGTGTACAAGATTAT+AGG | 0.305192 | 4.3:-38028478 | MS.gene54606:CDS |
| CAGAACTGCCTTTGAGTACT+TGG | 0.306166 | 4.3:+38027581 | None:intergenic |
| ATGTTAAAGATAGGGTATTA+AGG | 0.310637 | 4.3:-38027101 | MS.gene54606:CDS |
| CTTACTCCTGTAGCTTTCAT+TGG | 0.318767 | 4.3:+38028316 | None:intergenic |
| AACTACAAGACAGGAAATTA+AGG | 0.323447 | 4.3:-38029558 | MS.gene54606:CDS |
| TGCAATTATAACTAGTGAAT+TGG | 0.324077 | 4.3:-38028237 | MS.gene54606:CDS |
| GATTTATGAAAGCTTCAAAA+TGG | 0.324347 | 4.3:+38027556 | None:intergenic |
| ACAAGAGCCGGTTACGGATT+TGG | 0.324635 | 4.3:+38028373 | None:intergenic |
| GTTTAATCTGTTCACAAAGT+TGG | 0.328307 | 4.3:+38027829 | None:intergenic |
| TTCTGAGATGCGATGTTCAT+TGG | 0.343847 | 4.3:-38027946 | MS.gene54606:CDS |
| TGAGAAACAGAGCGAGAAAC+AGG | 0.345072 | 4.3:+38029443 | None:intergenic |
| TTTAATCTGTTCACAAAGTT+GGG | 0.345847 | 4.3:+38027830 | None:intergenic |
| AATTCACTAGTTATAATTGC+AGG | 0.346045 | 4.3:+38028239 | None:intergenic |
| AGTTGGGATGAAGGAGAATC+AGG | 0.354966 | 4.3:-38028519 | MS.gene54606:intron |
| TGCAGGGTTACATTTATTGC+AGG | 0.358818 | 4.3:+38028256 | None:intergenic |
| CAGAACATATGTGAGATTCT+AGG | 0.359220 | 4.3:+38028405 | None:intergenic |
| TAAGAGAAGAAACAGTTTAG+AGG | 0.360943 | 4.3:-38028297 | MS.gene54606:CDS |
| AGCTCTTAGTTCCACAGCTT+TGG | 0.364810 | 4.3:+38029526 | None:intergenic |
| AACCTTTGATCATCGCTATA+TGG | 0.369774 | 4.3:-38027187 | MS.gene54606:CDS |
| ACCATGATCTTAACTTTGCT+TGG | 0.370606 | 4.3:+38027138 | None:intergenic |
| ATTCTCACAGGGGTGAAAAC+AGG | 0.386116 | 4.3:+38029401 | None:intergenic |
| GAATTTAGAGACAGTTTATA+CGG | 0.392230 | 4.3:+38027603 | None:intergenic |
| TGATTTCGTGGTTGTTTCCT+CGG | 0.394790 | 4.3:-38028124 | MS.gene54606:CDS |
| CTCTAAATTGGATCAGGCCT+TGG | 0.408199 | 4.3:-38027323 | MS.gene54606:CDS |
| TTGCTTGGACCCTGTGACCT+AGG | 0.408370 | 4.3:+38027153 | None:intergenic |
| CGTGGCAGGAACAACAATAT+TGG | 0.408732 | 4.3:+38028190 | None:intergenic |
| AACTGGTGTACAAGATTATA+GGG | 0.415849 | 4.3:-38028477 | MS.gene54606:CDS |
| TTCCTAGTTTATTTAGGCTG+TGG | 0.418321 | 4.3:+38027053 | None:intergenic |
| ATAAACCAAGTTCAAGAAAA+GGG | 0.423850 | 4.3:-38028454 | MS.gene54606:CDS |
| TCCTCAGATTCTGCTCTACT+TGG | 0.425291 | 4.3:+38028071 | None:intergenic |
| GTTAAGATCATGGTTAATCC+AGG | 0.427966 | 4.3:-38027129 | MS.gene54606:CDS |
| TAAGGTGTAAGGTCCTTTGC+AGG | 0.436843 | 4.3:-38027083 | MS.gene54606:CDS |
| AAAGCTTGAAGGAGCTGCTC+AGG | 0.437990 | 4.3:+38027300 | None:intergenic |
| TCTGAGATGCGATGTTCATT+GGG | 0.440475 | 4.3:-38027945 | MS.gene54606:CDS |
| GATAAACCAAGTTCAAGAAA+AGG | 0.442732 | 4.3:-38028455 | MS.gene54606:CDS |
| GATGACACCAAATCCGTAAC+CGG | 0.450685 | 4.3:-38028380 | MS.gene54606:CDS |
| CTGGAATGAGGTACTGAGAA+AGG | 0.452317 | 4.3:-38027412 | MS.gene54606:CDS |
| GAGACAGAAGATGGAGTACT+TGG | 0.456731 | 4.3:-38027916 | MS.gene54606:CDS |
| CAGCTACAAAGAAAGCTTGA+AGG | 0.457579 | 4.3:+38027289 | None:intergenic |
| AGAATCTGAGGATGTTTCTC+AGG | 0.458365 | 4.3:-38028060 | MS.gene54606:CDS |
| GAATAGAGACGTGGCGTTGG+TGG | 0.463871 | 4.3:-38027973 | MS.gene54606:CDS |
| CAGAGAGGGAAACCAATTGA+TGG | 0.465923 | 4.3:-38027792 | MS.gene54606:CDS |
| CTCCTGTAGCTTTCATTGGT+AGG | 0.467705 | 4.3:+38028320 | None:intergenic |
| AGTGGAAACAGCATAGAAAC+TGG | 0.477703 | 4.3:-38028494 | MS.gene54606:CDS |
| CAATGGTGGGTTGAAAGAAA+AGG | 0.480886 | 4.3:+38027236 | None:intergenic |
| TTGCTCTTAGGAACTTGAGC+TGG | 0.483111 | 4.3:-38027431 | MS.gene54606:CDS |
| GAATGAGGAAGTAATGATAG+AGG | 0.484289 | 4.3:-38027745 | MS.gene54606:CDS |
| ATCCCTTGCCTGCGTCTGCA+TGG | 0.485992 | 4.3:+38027854 | None:intergenic |
| ATCATTACTTCCTCATTCAC+AGG | 0.490591 | 4.3:+38027750 | None:intergenic |
| CCACTACTCTAAATTGGATC+AGG | 0.492248 | 4.3:-38027329 | MS.gene54606:CDS |
| TAGTTCCACAGCTTTGGCTA+TGG | 0.496028 | 4.3:+38029532 | None:intergenic |
| TGAAGGAGCTGCTCAGGCCA+AGG | 0.500301 | 4.3:+38027306 | None:intergenic |
| TCGCTTGGCGGTCTTCATGA+CGG | 0.500477 | 4.3:+38027469 | None:intergenic |
| AGATAGGGTATTAAGGTGTA+AGG | 0.504352 | 4.3:-38027094 | MS.gene54606:CDS |
| ATTTGCACAAGAGCCGGTTA+CGG | 0.506731 | 4.3:+38028367 | None:intergenic |
| CAATATTGTTGTTCCTGCCA+CGG | 0.511774 | 4.3:-38028189 | MS.gene54606:CDS |
| AAATACAATTCTCAAAGTCT+TGG | 0.513794 | 4.3:+38027523 | None:intergenic |
| AGTCTGAAACGAAAAGCAAA+GGG | 0.516834 | 4.3:-38028148 | MS.gene54606:CDS |
| ATGAAGGAGAATCAGGAAAG+TGG | 0.519121 | 4.3:-38028512 | MS.gene54606:intron |
| TCTCAGGTTCTCAAGGACAT+AGG | 0.520348 | 4.3:-38028044 | MS.gene54606:CDS |
| TATATGATTTGCACAAGAGC+CGG | 0.520360 | 4.3:+38028361 | None:intergenic |
| GGGAGAGTTGAGACAGAAGA+TGG | 0.523009 | 4.3:-38027925 | MS.gene54606:CDS |
| AAAGCAAAGGGGTGATTTCG+TGG | 0.524133 | 4.3:-38028136 | MS.gene54606:CDS |
| ATGACGAGAATTTCGCTTGG+CGG | 0.524799 | 4.3:+38027457 | None:intergenic |
| AGATATGAGTCCTAGGTCAC+AGG | 0.524990 | 4.3:-38027163 | MS.gene54606:CDS |
| GACGAGTGGGAATCCGTGGC+AGG | 0.527984 | 4.3:+38028176 | None:intergenic |
| CCCTTAAAACTCCCAATGGT+GGG | 0.532372 | 4.3:+38027223 | None:intergenic |
| ATATGGAAGATATGAGTCCT+AGG | 0.535709 | 4.3:-38027170 | MS.gene54606:CDS |
| CACCTACCAATGAAAGCTAC+AGG | 0.535955 | 4.3:-38028322 | MS.gene54606:CDS |
| ACCCTTAAAACTCCCAATGG+TGG | 0.537328 | 4.3:+38027222 | None:intergenic |
| ATTCACTAGTTATAATTGCA+GGG | 0.541370 | 4.3:+38028240 | None:intergenic |
| TCCAAGCAAAGTTAAGATCA+TGG | 0.542194 | 4.3:-38027139 | MS.gene54606:CDS |
| TTATGCTTCTTCTTTAACCG+AGG | 0.546831 | 4.3:+38028107 | None:intergenic |
| GGATGTTTCTCAGGTTCTCA+AGG | 0.550773 | 4.3:-38028051 | MS.gene54606:CDS |
| TCTAAATTCCAAGTACTCAA+AGG | 0.555958 | 4.3:-38027589 | MS.gene54606:CDS |
| CATAGGAATAATGTCAATTG+AGG | 0.564077 | 4.3:-38028027 | MS.gene54606:CDS |
| AATCCATGCAGACGCAGGCA+AGG | 0.566446 | 4.3:-38027857 | MS.gene54606:CDS |
| AAATTCAATGCCTGTGAATG+AGG | 0.569144 | 4.3:-38027760 | MS.gene54606:CDS |
| CAGTCTGAAACGAAAAGCAA+AGG | 0.571815 | 4.3:-38028149 | MS.gene54606:CDS |
| TGGAATGAGGTACTGAGAAA+GGG | 0.572883 | 4.3:-38027411 | MS.gene54606:CDS |
| AAACTCAGAAACTACAAGAC+AGG | 0.574537 | 4.3:-38029567 | MS.gene54606:CDS |
| TTAAGATCATGGTTAATCCA+GGG | 0.574929 | 4.3:-38027128 | MS.gene54606:CDS |
| GAGAAACAGAGCGAGAAACA+GGG | 0.575679 | 4.3:+38029444 | None:intergenic |
| CTGTGGATTTGTACCTGCAA+AGG | 0.576366 | 4.3:+38027070 | None:intergenic |
| TTAGTAATCTTCCTCAGAGA+GGG | 0.576543 | 4.3:-38027806 | MS.gene54606:CDS |
| CTAGTGAATTGGAGAGTGCA+AGG | 0.578519 | 4.3:-38028226 | MS.gene54606:CDS |
| CGAGAATAGAGACGTGGCGT+TGG | 0.578816 | 4.3:-38027976 | MS.gene54606:CDS |
| TTCAGACTGAAACGACGAGT+GGG | 0.579873 | 4.3:+38028163 | None:intergenic |
| TAGGAACTTGAGCTGGAATG+AGG | 0.582495 | 4.3:-38027424 | MS.gene54606:CDS |
| CTATCTTTAACATAAAACCC+TGG | 0.589585 | 4.3:+38027111 | None:intergenic |
| TTCCATATAGCGATGATCAA+AGG | 0.589637 | 4.3:+38027185 | None:intergenic |
| GAAGCAATCCATGCAGACGC+AGG | 0.589707 | 4.3:-38027862 | MS.gene54606:CDS |
| CTTCATGCTGCTTTAATGCG+AGG | 0.590460 | 4.3:-38029503 | MS.gene54606:CDS |
| CCTGATCCAATTTAGAGTAG+TGG | 0.590540 | 4.3:+38027329 | None:intergenic |
| TTCTCACAGGGGTGAAAACA+GGG | 0.591379 | 4.3:+38029402 | None:intergenic |
| CGAATGACGAGAATTTCGCT+TGG | 0.594200 | 4.3:+38027454 | None:intergenic |
| ATCCATGCAGACGCAGGCAA+GGG | 0.596130 | 4.3:-38027856 | MS.gene54606:CDS |
| AATGAGGAAGTAATGATAGA+GGG | 0.603683 | 4.3:-38027744 | MS.gene54606:CDS |
| AGGAGATAGAAACTTTGCGT+TGG | 0.604884 | 4.3:+38029469 | None:intergenic |
| TCCAAGTAGAGCAGAATCTG+AGG | 0.620203 | 4.3:-38028072 | MS.gene54606:CDS |
| AAACGACGAGTGGGAATCCG+TGG | 0.621697 | 4.3:+38028172 | None:intergenic |
| TCAACCCTTAAAACTCCCAA+TGG | 0.624174 | 4.3:+38027219 | None:intergenic |
| ACAGAGCGAGAAACAGGGGA+AGG | 0.627334 | 4.3:+38029449 | None:intergenic |
| TAAACCAAGTTCAAGAAAAG+GGG | 0.629543 | 4.3:-38028453 | MS.gene54606:CDS |
| GATATGAGTCCTAGGTCACA+GGG | 0.630552 | 4.3:-38027162 | MS.gene54606:CDS |
| TCAATTGGTTTCCCTCTCTG+AGG | 0.637014 | 4.3:+38027795 | None:intergenic |
| ACATATGTGAGATTCTAGGT+TGG | 0.637680 | 4.3:+38028409 | None:intergenic |
| CTTAGTAATCTTCCTCAGAG+AGG | 0.639380 | 4.3:-38027807 | MS.gene54606:CDS |
| TTTCAGACTGAAACGACGAG+TGG | 0.641833 | 4.3:+38028162 | None:intergenic |
| AGAAACAGAGCGAGAAACAG+GGG | 0.648901 | 4.3:+38029445 | None:intergenic |
| TTGTAGCTGCAAAATGCATG+TGG | 0.649740 | 4.3:-38027275 | MS.gene54606:CDS |
| GGTTGCCATAGCCAAAGCTG+TGG | 0.663368 | 4.3:-38029537 | MS.gene54606:CDS |
| AAAGGGGTACTACTACCTTG+TGG | 0.678852 | 4.3:-38028437 | MS.gene54606:CDS |
| TCTAGGTTGGTAAAACCACA+AGG | 0.696108 | 4.3:+38028422 | None:intergenic |
| AGCGAACGAGAATAGAGACG+TGG | 0.717689 | 4.3:-38027982 | MS.gene54606:CDS |
| GTCTGAAACGAAAAGCAAAG+GGG | 0.723496 | 4.3:-38028147 | MS.gene54606:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAGTTACTTTTGATT+TGG | - | chr4.3:38027390-38027409 | MS.gene54606:CDS | 15.0% |
| !!! | AATTGTATTTTTCAAAAGAA+CGG | - | chr4.3:38029172-38029191 | MS.gene54606:intron | 15.0% |
| !!! | CATTTTCTCAAATTATTATT+TGG | + | chr4.3:38027887-38027906 | None:intergenic | 15.0% |
| !!! | TTTTGAGAATAAATAAGATA+AGG | + | chr4.3:38027604-38027623 | None:intergenic | 15.0% |
| !! | AGAATAAATAAGATAAGGAA+AGG | + | chr4.3:38027599-38027618 | None:intergenic | 20.0% |
| !! | AGATAATAAACATCATCATT+AGG | + | chr4.3:38027743-38027762 | None:intergenic | 20.0% |
| !! | ATCAAGAAAAACAAAATTCA+AGG | + | chr4.3:38027317-38027336 | None:intergenic | 20.0% |
| !! | ATGAAACTACTAAACAAAAA+AGG | + | chr4.3:38027661-38027680 | None:intergenic | 20.0% |
| !! | TTTCTAAACATGAGAATTAT+TGG | - | chr4.3:38028071-38028090 | MS.gene54606:CDS | 20.0% |
| !!! | TAAAAAGATTAATTTTGGAG+TGG | + | chr4.3:38028021-38028040 | None:intergenic | 20.0% |
| !!! | TTTATTCCTTGTTTATTGTT+TGG | - | chr4.3:38027525-38027544 | MS.gene54606:CDS | 20.0% |
| !!! | TTTCTTCAATGTTGTTTATA+AGG | + | chr4.3:38029018-38029037 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTCTTGATGAAAA+GGG | - | chr4.3:38027322-38027341 | MS.gene54606:CDS | 20.0% |
| !!! | TTTTGTTTTTCTTGATGAAA+AGG | - | chr4.3:38027321-38027340 | MS.gene54606:CDS | 20.0% |
| ! | AAAACTTTAACTCTCATTCT+AGG | + | chr4.3:38027635-38027654 | None:intergenic | 25.0% |
| ! | AAATACAATTCTCAAAGTCT+TGG | + | chr4.3:38029162-38029181 | None:intergenic | 25.0% |
| ! | AATTCACTAGTTATAATTGC+AGG | + | chr4.3:38028446-38028465 | None:intergenic | 25.0% |
| ! | ATAAACCAAGTTCAAGAAAA+GGG | - | chr4.3:38028228-38028247 | MS.gene54606:CDS | 25.0% |
| ! | ATATTGATACAAATCTTCTG+AGG | + | chr4.3:38027807-38027826 | None:intergenic | 25.0% |
| ! | ATTCACTAGTTATAATTGCA+GGG | + | chr4.3:38028445-38028464 | None:intergenic | 25.0% |
| ! | GAATTTAGAGACAGTTTATA+CGG | + | chr4.3:38029082-38029101 | None:intergenic | 25.0% |
| ! | GATTTATGAAAGCTTCAAAA+TGG | + | chr4.3:38029129-38029148 | None:intergenic | 25.0% |
| ! | TGCAATTATAACTAGTGAAT+TGG | - | chr4.3:38028445-38028464 | MS.gene54606:CDS | 25.0% |
| ! | TGTTACTGTTATCATTGATA+GGG | - | chr4.3:38027435-38027454 | MS.gene54606:CDS | 25.0% |
| ! | TTGTTACTGTTATCATTGAT+AGG | - | chr4.3:38027434-38027453 | MS.gene54606:CDS | 25.0% |
| ! | TTTAATCTGTTCACAAAGTT+GGG | + | chr4.3:38028855-38028874 | None:intergenic | 25.0% |
| !! | AGTTCAAATTTTCTGTCAAT+GGG | + | chr4.3:38029048-38029067 | None:intergenic | 25.0% |
| !! | ATGTTAAAGATAGGGTATTA+AGG | - | chr4.3:38029581-38029600 | MS.gene54606:CDS | 25.0% |
| !! | TTTTCATCATTTCCATCAAT+TGG | + | chr4.3:38028905-38028924 | None:intergenic | 25.0% |
| !!! | AGGGTTTTATGTTAAAGATA+GGG | - | chr4.3:38029573-38029592 | MS.gene54606:CDS | 25.0% |
| !!! | TTTTGAAGCTTTCATAAATC+AGG | - | chr4.3:38029129-38029148 | MS.gene54606:intron | 25.0% |
| AAACTGGTGTACAAGATTAT+AGG | - | chr4.3:38028204-38028223 | MS.gene54606:CDS | 30.0% | |
| AAAGAAAGAAATTCTCACAG+GGG | + | chr4.3:38027294-38027313 | None:intergenic | 30.0% | |
| AACTACAAGACAGGAAATTA+AGG | - | chr4.3:38027124-38027143 | MS.gene54606:CDS | 30.0% | |
| AACTGGTGTACAAGATTATA+GGG | - | chr4.3:38028205-38028224 | MS.gene54606:CDS | 30.0% | |
| AATGAGGAAGTAATGATAGA+GGG | - | chr4.3:38028938-38028957 | MS.gene54606:intron | 30.0% | |
| CATAGGAATAATGTCAATTG+AGG | - | chr4.3:38028655-38028674 | MS.gene54606:intron | 30.0% | |
| CCTAACAATATCTGAAAGTT+GGG | - | chr4.3:38028147-38028166 | MS.gene54606:CDS | 30.0% | |
| CTATCTTTAACATAAAACCC+TGG | + | chr4.3:38029574-38029593 | None:intergenic | 30.0% | |
| CTGAGGACAATTATAAAGTT+GGG | + | chr4.3:38027790-38027809 | None:intergenic | 30.0% | |
| GAAAGAAAGAAATTCTCACA+GGG | + | chr4.3:38027295-38027314 | None:intergenic | 30.0% | |
| GATAAACCAAGTTCAAGAAA+AGG | - | chr4.3:38028227-38028246 | MS.gene54606:CDS | 30.0% | |
| GTATTACCACTACTCTAAAT+TGG | - | chr4.3:38029347-38029366 | MS.gene54606:intron | 30.0% | |
| GTTTAATCTGTTCACAAAGT+TGG | + | chr4.3:38028856-38028875 | None:intergenic | 30.0% | |
| GTTTAGTAGTTTCATTGTCA+TGG | - | chr4.3:38027666-38027685 | MS.gene54606:CDS | 30.0% | |
| TAAACCAAGTTCAAGAAAAG+GGG | - | chr4.3:38028229-38028248 | MS.gene54606:CDS | 30.0% | |
| TAAGAGAAGAAACAGTTTAG+AGG | - | chr4.3:38028385-38028404 | MS.gene54606:CDS | 30.0% | |
| TACCAACCAAACAATAAACA+AGG | + | chr4.3:38027534-38027553 | None:intergenic | 30.0% | |
| TCTAAATTCCAAGTACTCAA+AGG | - | chr4.3:38029093-38029112 | MS.gene54606:intron | 30.0% | |
| TCTGAGGACAATTATAAAGT+TGG | + | chr4.3:38027791-38027810 | None:intergenic | 30.0% | |
| TTAAATGTAACCATGTGTGT+TGG | - | chr4.3:38027913-38027932 | MS.gene54606:CDS | 30.0% | |
| TTAAGATCATGGTTAATCCA+GGG | - | chr4.3:38029554-38029573 | MS.gene54606:CDS | 30.0% | |
| ! | GAGTTCAAATTTTCTGTCAA+TGG | + | chr4.3:38029049-38029068 | None:intergenic | 30.0% |
| ! | TCATTGTCATGGAACTTTTA+AGG | - | chr4.3:38027677-38027696 | MS.gene54606:CDS | 30.0% |
| ! | TTCCTTGTTTATTGTTTGGT+TGG | - | chr4.3:38027529-38027548 | MS.gene54606:CDS | 30.0% |
| !! | CAGGGTTTTATGTTAAAGAT+AGG | - | chr4.3:38029572-38029591 | MS.gene54606:CDS | 30.0% |
| !!! | ATTAATTTTGGAGTGGAAGT+TGG | + | chr4.3:38028014-38028033 | None:intergenic | 30.0% |
| !!! | TTAATTTTGGAGTGGAAGTT+GGG | + | chr4.3:38028013-38028032 | None:intergenic | 30.0% |
| AAACTCAGAAACTACAAGAC+AGG | - | chr4.3:38027115-38027134 | MS.gene54606:CDS | 35.0% | |
| AAATTCAATGCCTGTGAATG+AGG | - | chr4.3:38028922-38028941 | MS.gene54606:intron | 35.0% | |
| AACCTTTGATCATCGCTATA+TGG | - | chr4.3:38029495-38029514 | MS.gene54606:CDS | 35.0% | |
| ACATATGTGAGATTCTAGGT+TGG | + | chr4.3:38028276-38028295 | None:intergenic | 35.0% | |
| ACCATGATCTTAACTTTGCT+TGG | + | chr4.3:38029547-38029566 | None:intergenic | 35.0% | |
| ATATCTGAAAGTTGGGATGA+AGG | - | chr4.3:38028154-38028173 | MS.gene54606:CDS | 35.0% | |
| ATATGGAAGATATGAGTCCT+AGG | - | chr4.3:38029512-38029531 | MS.gene54606:CDS | 35.0% | |
| ATATTGTTAGGCATTTCGTG+TGG | + | chr4.3:38028138-38028157 | None:intergenic | 35.0% | |
| ATCATTACTTCCTCATTCAC+AGG | + | chr4.3:38028935-38028954 | None:intergenic | 35.0% | |
| CAGAACATATGTGAGATTCT+AGG | + | chr4.3:38028280-38028299 | None:intergenic | 35.0% | |
| CCCAACTTTCAGATATTGTT+AGG | + | chr4.3:38028150-38028169 | None:intergenic | 35.0% | |
| CTTGCATATTCCATGAATTC+AGG | + | chr4.3:38027477-38027496 | None:intergenic | 35.0% | |
| CTTTAACTCTCATTCTAGGT+TGG | + | chr4.3:38027631-38027650 | None:intergenic | 35.0% | |
| GAATGAGGAAGTAATGATAG+AGG | - | chr4.3:38028937-38028956 | MS.gene54606:intron | 35.0% | |
| GCCTAACAATATCTGAAAGT+TGG | - | chr4.3:38028146-38028165 | MS.gene54606:CDS | 35.0% | |
| GGAAAGAAAGAAATTCTCAC+AGG | + | chr4.3:38027296-38027315 | None:intergenic | 35.0% | |
| GTTAAGATCATGGTTAATCC+AGG | - | chr4.3:38029553-38029572 | MS.gene54606:CDS | 35.0% | |
| TCCAAGCAAAGTTAAGATCA+TGG | - | chr4.3:38029543-38029562 | MS.gene54606:CDS | 35.0% | |
| TTAGTAATCTTCCTCAGAGA+GGG | - | chr4.3:38028876-38028895 | MS.gene54606:intron | 35.0% | |
| TTATGCTTCTTCTTTAACCG+AGG | + | chr4.3:38028578-38028597 | None:intergenic | 35.0% | |
| TTCCATATAGCGATGATCAA+AGG | + | chr4.3:38029500-38029519 | None:intergenic | 35.0% | |
| TTCCATGAATTCAGGTACTT+TGG | + | chr4.3:38027469-38027488 | None:intergenic | 35.0% | |
| ! | ACACCTTCAATCTAAAGTGT+CGG | - | chr4.3:38027973-38027992 | MS.gene54606:CDS | 35.0% |
| ! | AGATAGGGTATTAAGGTGTA+AGG | - | chr4.3:38029588-38029607 | MS.gene54606:CDS | 35.0% |
| ! | AGTCTGAAACGAAAAGCAAA+GGG | - | chr4.3:38028534-38028553 | MS.gene54606:intron | 35.0% |
| ! | ATCCAAAGTACCTGAATTCA+TGG | - | chr4.3:38027464-38027483 | MS.gene54606:CDS | 35.0% |
| ! | CATGACGGTCTATGAATTTT+GGG | + | chr4.3:38029201-38029220 | None:intergenic | 35.0% |
| ! | GTTTTCAAAGACAACAACAG+TGG | - | chr4.3:38027092-38027111 | MS.gene54606:CDS | 35.0% |
| ! | TATATGATTTGCACAAGAGC+CGG | + | chr4.3:38028324-38028343 | None:intergenic | 35.0% |
| ! | TCATGACGGTCTATGAATTT+TGG | + | chr4.3:38029202-38029221 | None:intergenic | 35.0% |
| ! | TTTTCTTTCAACCCACCATT+GGG | - | chr4.3:38029448-38029467 | MS.gene54606:CDS | 35.0% |
| !!! | TAATTTTGGAGTGGAAGTTG+GGG | + | chr4.3:38028012-38028031 | None:intergenic | 35.0% |
| AGAATCTGAGGATGTTTCTC+AGG | - | chr4.3:38028622-38028641 | MS.gene54606:intron | 40.0% | |
| AGACCGACACTTTAGATTGA+AGG | + | chr4.3:38027979-38027998 | None:intergenic | 40.0% | |
| AGGAGATAGAAACTTTGCGT+TGG | + | chr4.3:38027216-38027235 | None:intergenic | 40.0% | |
| AGTGGAAACAGCATAGAAAC+TGG | - | chr4.3:38028188-38028207 | MS.gene54606:CDS | 40.0% | |
| ATGAAGGAGAATCAGGAAAG+TGG | - | chr4.3:38028170-38028189 | MS.gene54606:CDS | 40.0% | |
| CAGCTACAAAGAAAGCTTGA+AGG | + | chr4.3:38029396-38029415 | None:intergenic | 40.0% | |
| CATCATTAGGAATTTGCCAC+AGG | + | chr4.3:38027730-38027749 | None:intergenic | 40.0% | |
| CCACTACTCTAAATTGGATC+AGG | - | chr4.3:38029353-38029372 | MS.gene54606:intron | 40.0% | |
| CTTACTCCTGTAGCTTTCAT+TGG | + | chr4.3:38028369-38028388 | None:intergenic | 40.0% | |
| CTTAGTAATCTTCCTCAGAG+AGG | - | chr4.3:38028875-38028894 | MS.gene54606:intron | 40.0% | |
| GAATTCTGAACTGAATCCTG+TGG | - | chr4.3:38027711-38027730 | MS.gene54606:CDS | 40.0% | |
| TAAGGAAAGGAGAACAACGA+TGG | + | chr4.3:38027586-38027605 | None:intergenic | 40.0% | |
| TCAACCCTTAAAACTCCCAA+TGG | + | chr4.3:38029466-38029485 | None:intergenic | 40.0% | |
| TCTGGTTGTACGATACAAGT+GGG | + | chr4.3:38028114-38028133 | None:intergenic | 40.0% | |
| TGCAGGGTTACATTTATTGC+AGG | + | chr4.3:38028429-38028448 | None:intergenic | 40.0% | |
| TTGTAGCTGCAAAATGCATG+TGG | - | chr4.3:38029407-38029426 | MS.gene54606:intron | 40.0% | |
| ! | AGTACCCCTTTTCTTGAACT+TGG | + | chr4.3:38028236-38028255 | None:intergenic | 40.0% |
| ! | CAATATTGTTGTTCCTGCCA+CGG | - | chr4.3:38028493-38028512 | MS.gene54606:CDS | 40.0% |
| ! | CAGTCTGAAACGAAAAGCAA+AGG | - | chr4.3:38028533-38028552 | MS.gene54606:intron | 40.0% |
| ! | CCTGATCCAATTTAGAGTAG+TGG | + | chr4.3:38029356-38029375 | None:intergenic | 40.0% |
| ! | CTTTTCTTTCAACCCACCAT+TGG | - | chr4.3:38029447-38029466 | MS.gene54606:CDS | 40.0% |
| ! | GTCTGAAACGAAAAGCAAAG+GGG | - | chr4.3:38028535-38028554 | MS.gene54606:intron | 40.0% |
| ! | TCTGAGATGCGATGTTCATT+GGG | - | chr4.3:38028737-38028756 | MS.gene54606:intron | 40.0% |
| ! | TGATTTCGTGGTTGTTTCCT+CGG | - | chr4.3:38028558-38028577 | MS.gene54606:intron | 40.0% |
| ! | TTCTGGTTGTACGATACAAG+TGG | + | chr4.3:38028115-38028134 | None:intergenic | 40.0% |
| !! | CAATGGTGGGTTGAAAGAAA+AGG | + | chr4.3:38029449-38029468 | None:intergenic | 40.0% |
| !! | TCTAGGTTGGTAAAACCACA+AGG | + | chr4.3:38028263-38028282 | None:intergenic | 40.0% |
| !! | TGGAATGAGGTACTGAGAAA+GGG | - | chr4.3:38029271-38029290 | MS.gene54606:intron | 40.0% |
| !! | TTCTGAGATGCGATGTTCAT+TGG | - | chr4.3:38028736-38028755 | MS.gene54606:intron | 40.0% |
| AAAGCAAAGGGGTGATTTCG+TGG | - | chr4.3:38028546-38028565 | MS.gene54606:intron | 45.0% | |
| ACCCTTAAAACTCCCAATGG+TGG | + | chr4.3:38029463-38029482 | None:intergenic | 45.0% | |
| AGAAACAGAGCGAGAAACAG+GGG | + | chr4.3:38027240-38027259 | None:intergenic | 45.0% | |
| AGACACAACACCAACACACA+TGG | + | chr4.3:38027926-38027945 | None:intergenic | 45.0% | |
| AGATATGAGTCCTAGGTCAC+AGG | - | chr4.3:38029519-38029538 | MS.gene54606:CDS | 45.0% | |
| AGCTCTTAGTTCCACAGCTT+TGG | + | chr4.3:38027159-38027178 | None:intergenic | 45.0% | |
| AGTGGAAGTTGGGGAATTAC+AGG | + | chr4.3:38028003-38028022 | None:intergenic | 45.0% | |
| AGTTGGGATGAAGGAGAATC+AGG | - | chr4.3:38028163-38028182 | MS.gene54606:CDS | 45.0% | |
| ATGACGAGAATTTCGCTTGG+CGG | + | chr4.3:38029228-38029247 | None:intergenic | 45.0% | |
| ATTCTCACAGGGGTGAAAAC+AGG | + | chr4.3:38027284-38027303 | None:intergenic | 45.0% | |
| ATTTGCACAAGAGCCGGTTA+CGG | + | chr4.3:38028318-38028337 | None:intergenic | 45.0% | |
| CACCTACCAATGAAAGCTAC+AGG | - | chr4.3:38028360-38028379 | MS.gene54606:CDS | 45.0% | |
| CAGAACTGCCTTTGAGTACT+TGG | + | chr4.3:38029104-38029123 | None:intergenic | 45.0% | |
| CAGAGAGGGAAACCAATTGA+TGG | - | chr4.3:38028890-38028909 | MS.gene54606:intron | 45.0% | |
| CCCTTAAAACTCCCAATGGT+GGG | + | chr4.3:38029462-38029481 | None:intergenic | 45.0% | |
| CGAATGACGAGAATTTCGCT+TGG | + | chr4.3:38029231-38029250 | None:intergenic | 45.0% | |
| CGTGGCAGGAACAACAATAT+TGG | + | chr4.3:38028495-38028514 | None:intergenic | 45.0% | |
| CTCCTGTAGCTTTCATTGGT+AGG | + | chr4.3:38028365-38028384 | None:intergenic | 45.0% | |
| CTCTAAATTGGATCAGGCCT+TGG | - | chr4.3:38029359-38029378 | MS.gene54606:intron | 45.0% | |
| CTGTGGATTTGTACCTGCAA+AGG | + | chr4.3:38029615-38029634 | None:intergenic | 45.0% | |
| GAAGAGCAGACACAAAACAC+CGG | - | chr4.3:38027839-38027858 | MS.gene54606:CDS | 45.0% | |
| GAGAAACAGAGCGAGAAACA+GGG | + | chr4.3:38027241-38027260 | None:intergenic | 45.0% | |
| GATATGAGTCCTAGGTCACA+GGG | - | chr4.3:38029520-38029539 | MS.gene54606:CDS | 45.0% | |
| GATGACACCAAATCCGTAAC+CGG | - | chr4.3:38028302-38028321 | MS.gene54606:CDS | 45.0% | |
| GGATGTTTCTCAGGTTCTCA+AGG | - | chr4.3:38028631-38028650 | MS.gene54606:intron | 45.0% | |
| TAAGGTGTAAGGTCCTTTGC+AGG | - | chr4.3:38029599-38029618 | MS.gene54606:CDS | 45.0% | |
| TAGGAACTTGAGCTGGAATG+AGG | - | chr4.3:38029258-38029277 | MS.gene54606:intron | 45.0% | |
| TCCAAGTAGAGCAGAATCTG+AGG | - | chr4.3:38028610-38028629 | MS.gene54606:intron | 45.0% | |
| TCCTCAGATTCTGCTCTACT+TGG | + | chr4.3:38028614-38028633 | None:intergenic | 45.0% | |
| TCTCAGGTTCTCAAGGACAT+AGG | - | chr4.3:38028638-38028657 | MS.gene54606:intron | 45.0% | |
| TCTCGTCATTCGTTGCTCTT+AGG | - | chr4.3:38029239-38029258 | MS.gene54606:intron | 45.0% | |
| TGACGAGTCAGTATTGTGTC+CGG | + | chr4.3:38027861-38027880 | None:intergenic | 45.0% | |
| TGAGAAACAGAGCGAGAAAC+AGG | + | chr4.3:38027242-38027261 | None:intergenic | 45.0% | |
| TTAGGCATTTCGTGTGGTTC+TGG | + | chr4.3:38028132-38028151 | None:intergenic | 45.0% | |
| TTCAGACTGAAACGACGAGT+GGG | + | chr4.3:38028522-38028541 | None:intergenic | 45.0% | |
| TTCTCACAGGGGTGAAAACA+GGG | + | chr4.3:38027283-38027302 | None:intergenic | 45.0% | |
| TTGCTCTTAGGAACTTGAGC+TGG | - | chr4.3:38029251-38029270 | MS.gene54606:intron | 45.0% | |
| TTTCAGACTGAAACGACGAG+TGG | + | chr4.3:38028523-38028542 | None:intergenic | 45.0% | |
| ! | ACCCACCATTGGGAGTTTTA+AGG | - | chr4.3:38029458-38029477 | MS.gene54606:CDS | 45.0% |
| ! | CTAGTGAATTGGAGAGTGCA+AGG | - | chr4.3:38028456-38028475 | MS.gene54606:CDS | 45.0% |
| ! | GAGACAGAAGATGGAGTACT+TGG | - | chr4.3:38028766-38028785 | MS.gene54606:intron | 45.0% |
| ! | TAGTTCCACAGCTTTGGCTA+TGG | + | chr4.3:38027153-38027172 | None:intergenic | 45.0% |
| ! | TCAATTGGTTTCCCTCTCTG+AGG | + | chr4.3:38028890-38028909 | None:intergenic | 45.0% |
| !! | AAAGGGGTACTACTACCTTG+TGG | - | chr4.3:38028245-38028264 | MS.gene54606:CDS | 45.0% |
| !! | CCCACCATTGGGAGTTTTAA+GGG | - | chr4.3:38029459-38029478 | MS.gene54606:CDS | 45.0% |
| !! | CTGGAATGAGGTACTGAGAA+AGG | - | chr4.3:38029270-38029289 | MS.gene54606:intron | 45.0% |
| !! | CTTCATGCTGCTTTAATGCG+AGG | - | chr4.3:38027179-38027198 | MS.gene54606:CDS | 45.0% |
| !!! | AAAATTAAAAAGATTAATTT+TGG | + | chr4.3:38028026-38028045 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTTTTATTTTGA+TGG | - | chr4.3:38028040-38028059 | MS.gene54606:CDS | 5.0% |
| AAAGCTTGAAGGAGCTGCTC+AGG | + | chr4.3:38029385-38029404 | None:intergenic | 50.0% | |
| ACAAGAGCCGGTTACGGATT+TGG | + | chr4.3:38028312-38028331 | None:intergenic | 50.0% | |
| AGCGAACGAGAATAGAGACG+TGG | - | chr4.3:38028700-38028719 | MS.gene54606:intron | 50.0% | |
| GGGAGAGTTGAGACAGAAGA+TGG | - | chr4.3:38028757-38028776 | MS.gene54606:intron | 50.0% | |
| AAACGACGAGTGGGAATCCG+TGG | + | chr4.3:38028513-38028532 | None:intergenic | 55.0% | |
| AATCCATGCAGACGCAGGCA+AGG | - | chr4.3:38028825-38028844 | MS.gene54606:intron | 55.0% | |
| ACAGAGCGAGAAACAGGGGA+AGG | + | chr4.3:38027236-38027255 | None:intergenic | 55.0% | |
| ATCCATGCAGACGCAGGCAA+GGG | - | chr4.3:38028826-38028845 | MS.gene54606:intron | 55.0% | |
| CGAGAATAGAGACGTGGCGT+TGG | - | chr4.3:38028706-38028725 | MS.gene54606:intron | 55.0% | |
| GAAGCAATCCATGCAGACGC+AGG | - | chr4.3:38028820-38028839 | MS.gene54606:intron | 55.0% | |
| GGTTGCCATAGCCAAAGCTG+TGG | - | chr4.3:38027145-38027164 | MS.gene54606:CDS | 55.0% | |
| TCGCTTGGCGGTCTTCATGA+CGG | + | chr4.3:38029216-38029235 | None:intergenic | 55.0% | |
| TTGCTTGGACCCTGTGACCT+AGG | + | chr4.3:38029532-38029551 | None:intergenic | 55.0% | |
| ! | GAATAGAGACGTGGCGTTGG+TGG | - | chr4.3:38028709-38028728 | MS.gene54606:intron | 55.0% |
| ATCCCTTGCCTGCGTCTGCA+TGG | + | chr4.3:38028831-38028850 | None:intergenic | 60.0% | |
| GCCTCACACACGTCAGACGT+CGG | - | chr4.3:38027948-38027967 | MS.gene54606:CDS | 60.0% | |
| TCCGACGTCTGACGTGTGTG+AGG | + | chr4.3:38027952-38027971 | None:intergenic | 60.0% | |
| TGAAGGAGCTGCTCAGGCCA+AGG | + | chr4.3:38029379-38029398 | None:intergenic | 60.0% | |
| GACGAGTGGGAATCCGTGGC+AGG | + | chr4.3:38028509-38028528 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 38027065 | 38029639 | 38027065 | ID=MS.gene54606 |
| chr4.3 | mRNA | 38027065 | 38029639 | 38027065 | ID=MS.gene54606.t1;Parent=MS.gene54606 |
| chr4.3 | exon | 38029409 | 38029639 | 38029409 | ID=MS.gene54606.t1.exon1;Parent=MS.gene54606.t1 |
| chr4.3 | CDS | 38029409 | 38029639 | 38029409 | ID=cds.MS.gene54606.t1;Parent=MS.gene54606.t1 |
| chr4.3 | exon | 38027065 | 38028528 | 38027065 | ID=MS.gene54606.t1.exon2;Parent=MS.gene54606.t1 |
| chr4.3 | CDS | 38027065 | 38028528 | 38027065 | ID=cds.MS.gene54606.t1;Parent=MS.gene54606.t1 |
| Gene Sequence |
| Protein sequence |
