AlfalfaGEDB | MS.gene56509

M. sativa cultivar XinJiangDaYe / MS.gene56509

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56509.t1	XP_013456775.1	86.7	285	38	0	1	285	1	285	1.70E-105	392.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56509.t1	A0A072UN60	86.7	285	38	0	1	285	1	285	1.2e-105	392.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049549	MS.gene56509	0.851288	9.79E-61	-1.69E-46
MS.gene049634	MS.gene56509	0.839954	1.16E-57	-1.69E-46
MS.gene050095	MS.gene56509	0.824218	9.09E-54	-1.69E-46
MS.gene050096	MS.gene56509	0.829639	4.60E-55	-1.69E-46
MS.gene050381	MS.gene56509	0.820044	8.45E-53	-1.69E-46
MS.gene051044	MS.gene56509	0.801433	9.03E-49	-1.69E-46
MS.gene05104	MS.gene56509	0.802245	6.15E-49	-1.69E-46
MS.gene051127	MS.gene56509	0.841432	4.77E-58	-1.69E-46
MS.gene051138	MS.gene56509	0.837425	5.24E-57	-1.69E-46
MS.gene051632	MS.gene56509	0.804535	2.06E-49	-1.69E-46
MS.gene052211	MS.gene56509	0.878062	3.81E-69	-1.69E-46
MS.gene052212	MS.gene56509	0.82876	7.52E-55	-1.69E-46
MS.gene05240	MS.gene56509	0.835278	1.84E-56	-1.69E-46
MS.gene05244	MS.gene56509	0.813091	3.05E-51	-1.69E-46
MS.gene053031	MS.gene56509	0.812675	3.76E-51	-1.69E-46
MS.gene053033	MS.gene56509	0.806955	6.40E-50	-1.69E-46
MS.gene053403	MS.gene56509	0.811899	5.56E-51	-1.69E-46
MS.gene053406	MS.gene56509	0.860828	1.57E-63	-1.69E-46
MS.gene053420	MS.gene56509	0.836908	7.10E-57	-1.69E-46
MS.gene053488	MS.gene56509	0.871362	7.24E-67	-1.69E-46
MS.gene053561	MS.gene56509	0.813386	2.63E-51	-1.69E-46
MS.gene053887	MS.gene56509	0.835962	1.24E-56	-1.69E-46
MS.gene054146	MS.gene56509	0.851523	8.40E-61	-1.69E-46
MS.gene054147	MS.gene56509	0.812002	5.28E-51	-1.69E-46
MS.gene054421	MS.gene56509	0.813604	2.35E-51	-1.69E-46
MS.gene054707	MS.gene56509	0.800526	1.38E-48	-1.69E-46
MS.gene054708	MS.gene56509	0.80406	2.59E-49	-1.69E-46
MS.gene054742	MS.gene56509	0.82287	1.88E-53	-1.69E-46
MS.gene055124	MS.gene56509	0.834337	3.18E-56	-1.69E-46
MS.gene055154	MS.gene56509	0.855616	5.60E-62	-1.69E-46
MS.gene055202	MS.gene56509	0.802707	4.94E-49	-1.69E-46
MS.gene055240	MS.gene56509	0.835533	1.59E-56	-1.69E-46
MS.gene05589	MS.gene56509	-0.809158	2.17E-50	-1.69E-46
MS.gene056076	MS.gene56509	0.805081	1.59E-49	-1.69E-46
MS.gene056218	MS.gene56509	0.810854	9.37E-51	-1.69E-46
MS.gene056224	MS.gene56509	0.838201	3.31E-57	-1.69E-46
MS.gene056856	MS.gene56509	0.804275	2.34E-49	-1.69E-46
MS.gene056920	MS.gene56509	0.821393	4.14E-53	-1.69E-46
MS.gene057261	MS.gene56509	0.802167	6.38E-49	-1.69E-46
MS.gene057547	MS.gene56509	0.806135	9.53E-50	-1.69E-46
MS.gene057550	MS.gene56509	0.82186	3.23E-53	-1.69E-46
MS.gene058099	MS.gene56509	0.827559	1.46E-54	-1.69E-46
MS.gene058171	MS.gene56509	0.820126	8.09E-53	-1.69E-46
MS.gene058173	MS.gene56509	0.816117	6.52E-52	-1.69E-46
MS.gene058175	MS.gene56509	0.823208	1.57E-53	-1.69E-46
MS.gene058341	MS.gene56509	0.806476	8.08E-50	-1.69E-46
MS.gene05837	MS.gene56509	-0.807275	5.47E-50	-1.69E-46
MS.gene058603	MS.gene56509	0.863827	1.88E-64	-1.69E-46
MS.gene058840	MS.gene56509	0.824702	7.00E-54	-1.69E-46
MS.gene059037	MS.gene56509	0.813519	2.46E-51	-1.69E-46
MS.gene059038	MS.gene56509	0.800673	1.29E-48	-1.69E-46
MS.gene059691	MS.gene56509	0.804333	2.27E-49	-1.69E-46
MS.gene059694	MS.gene56509	0.809946	1.47E-50	-1.69E-46
MS.gene059697	MS.gene56509	0.816935	4.28E-52	-1.69E-46
MS.gene059865	MS.gene56509	-0.804329	2.28E-49	-1.69E-46
MS.gene059916	MS.gene56509	0.808457	3.07E-50	-1.69E-46
MS.gene059953	MS.gene56509	0.820661	6.10E-53	-1.69E-46
MS.gene059955	MS.gene56509	0.83927	1.75E-57	-1.69E-46
MS.gene060087	MS.gene56509	0.824963	6.07E-54	-1.69E-46
MS.gene060205	MS.gene56509	0.800915	1.15E-48	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56509.t1	MTR_4g082355	92.982	285	20	0	1	285	1	285	9.90e-164	456
MS.gene56509.t1	MTR_4g082360	57.093	289	112	4	1	285	1	281	1.36e-96	286
MS.gene56509.t1	MTR_4g082365	58.397	262	86	3	1	262	1	239	5.98e-91	270
MS.gene56509.t1	MTR_4g082550	32.911	316	145	5	4	268	11	310	1.81e-30	117

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56509.t1	AT3G11810	34.385	317	158	7	4	274	14	326	7.00e-41	145

Find 73 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAACTTGCAGATGTGGAATT+TGG	0.213824	4.2:-27366565	MS.gene56509:CDS
CCATTTCTATACTGGAATTA+AGG	0.233291	4.2:+27366516	None:intergenic
CTTGGTTATGTTATGTTTCA+TGG	0.273202	4.2:-27366902	MS.gene56509:CDS
AAACATAACATAACCAAGTT+AGG	0.281828	4.2:+27366907	None:intergenic
CTCTCTTGCATCATCGCCTT+TGG	0.286792	4.2:-27367153	MS.gene56509:CDS
TGTGGTGGTGGAATCAAGTT+GGG	0.290700	4.2:-27366809	MS.gene56509:CDS
ATCATCAACCATTTCTATAC+TGG	0.301377	4.2:+27366508	None:intergenic
TTTCTATTTGGACTTCTCAT+TGG	0.321017	4.2:-27366982	MS.gene56509:CDS
CAAGAACCCAAACAATAAAA+AGG	0.329416	4.2:+27366723	None:intergenic
GTTGAGGAGAAGTTGGAAAT+TGG	0.356766	4.2:-27366776	MS.gene56509:CDS
GATGATTGTGGTGGGGTTTG+TGG	0.365382	4.2:+27367200	None:intergenic
CCTCAAAACTAACCCTAACT+TGG	0.411518	4.2:-27366920	MS.gene56509:CDS
TTACAATATTGTGGTTAATA+CGG	0.418130	4.2:-27366620	MS.gene56509:CDS
AACTTGCAGATGTGGAATTT+GGG	0.422001	4.2:-27366564	MS.gene56509:CDS
CGGTTGCGGTGGCGAGGAGG+GGG	0.427134	4.2:+27367034	None:intergenic
AGGGCTTCTTTGAGTTTGAC+TGG	0.436290	4.2:+27367081	None:intergenic
TCGTTTCTCATCATTTACTT+AGG	0.441069	4.2:-27366952	MS.gene56509:CDS
GAGAGGAAGGAGGAAGATGA+GGG	0.451247	4.2:+27367278	None:intergenic
GGGGAAGAAGGAAGTGATGA+TGG	0.452153	4.2:+27367053	None:intergenic
TTGTGGTGGTGGAATCAAGT+TGG	0.455015	4.2:-27366810	MS.gene56509:CDS
GGGATAAGAAAGAGAGAGGA+AGG	0.458026	4.2:+27367265	None:intergenic
AGAGAGGAAGGAGGAAGATG+AGG	0.461957	4.2:+27367277	None:intergenic
AAGTGGTTACAGTTTGGTAC+TGG	0.462095	4.2:-27366680	MS.gene56509:CDS
AACGGTTGCGGTGGCGAGGA+GGG	0.464493	4.2:+27367032	None:intergenic
GCAGCTAAGTGGTTACAGTT+TGG	0.469085	4.2:-27366686	MS.gene56509:CDS
GATAGAACATTCCACATGTT+CGG	0.469357	4.2:+27367351	None:intergenic
GGAAGTGATGATGGATTTGA+GGG	0.470132	4.2:+27367062	None:intergenic
GGAAGATGAGGGAGAGAGTG+AGG	0.472871	4.2:+27367289	None:intergenic
AGGAAGTGATGATGGATTTG+AGG	0.474323	4.2:+27367061	None:intergenic
TTGAACCGTTGAGGAGAAGT+TGG	0.487160	4.2:-27366783	MS.gene56509:CDS
CTTCTTTGAGTTTGACTGGT+CGG	0.508967	4.2:+27367085	None:intergenic
TATTATGCTTTACAATATTG+TGG	0.510311	4.2:-27366629	MS.gene56509:CDS
TTTGCTAGTTAACTTGAGCT+TGG	0.511596	4.2:-27366842	MS.gene56509:CDS
AGGAGGGATAAGAAAGAGAG+AGG	0.513309	4.2:+27367261	None:intergenic
ACGGTTGCGGTGGCGAGGAG+GGG	0.520202	4.2:+27367033	None:intergenic
TGCAAGAGAGAATGATGAAG+AGG	0.520202	4.2:+27367166	None:intergenic
CAACGGTTGCGGTGGCGAGG+AGG	0.521164	4.2:+27367031	None:intergenic
AACATAACATAACCAAGTTA+GGG	0.521608	4.2:+27366908	None:intergenic
ATTCCACATGTTCGGAGCCA+TGG	0.524054	4.2:+27367359	None:intergenic
GGAAAAGTATTGGAAGAGGA+GGG	0.524529	4.2:+27367245	None:intergenic
TACAAGGAGATGATTGTGGT+GGG	0.527480	4.2:+27367192	None:intergenic
GACGACAAATGCAACGGTTG+CGG	0.532651	4.2:+27367020	None:intergenic
AGAAGTTGGAAATTGGTGAA+TGG	0.532752	4.2:-27366769	MS.gene56509:CDS
GGTGAAAATTATTGTGGTGG+TGG	0.541805	4.2:-27366821	MS.gene56509:CDS
TGGAAAAGTATTGGAAGAGG+AGG	0.541994	4.2:+27367244	None:intergenic
GATGGTGATGACAGCGCCAA+AGG	0.545392	4.2:+27367137	None:intergenic
ATGCAACGGTTGCGGTGGCG+AGG	0.548909	4.2:+27367028	None:intergenic
GGTGAATGGAATGAAAAGGT+TGG	0.549410	4.2:-27366755	MS.gene56509:CDS
GCATGGTGAACTTGCAGATG+TGG	0.558840	4.2:-27366572	MS.gene56509:CDS
GAGATACAAGGAGATGATTG+TGG	0.560857	4.2:+27367188	None:intergenic
AGCATAATAATAGCAAGTAT+AGG	0.563540	4.2:+27366643	None:intergenic
TGCAGATGTGGAATTTGGGA+AGG	0.563619	4.2:-27366560	MS.gene56509:CDS
GTGGTGGTGGAATCAAGTTG+GGG	0.564765	4.2:-27366808	MS.gene56509:CDS
ATAAGAAAGAGAGAGGAAGG+AGG	0.577919	4.2:+27367268	None:intergenic
AATTGGTGAATGGAATGAAA+AGG	0.585430	4.2:-27366759	MS.gene56509:CDS
AATGATGAAGAGGAGATACA+AGG	0.585911	4.2:+27367176	None:intergenic
ACAAGGAGATGATTGTGGTG+GGG	0.587087	4.2:+27367193	None:intergenic
GACAAATGCAACGGTTGCGG+TGG	0.587419	4.2:+27367023	None:intergenic
GTGATATTGCTGCAGCTAAG+TGG	0.587532	4.2:-27366697	MS.gene56509:CDS
GAGCTTGGTGAAAATTATTG+TGG	0.588574	4.2:-27366827	MS.gene56509:CDS
ATACCATGGCTCCGAACATG+TGG	0.598547	4.2:-27367362	None:intergenic
AATTTCCAACTTCTCCTCAA+CGG	0.599074	4.2:+27366778	None:intergenic
ACTAGCAAATACGTCACAAG+AGG	0.615825	4.2:+27366856	None:intergenic
CTGGTCGGTTAAAGAAGTCG+TGG	0.626383	4.2:+27367100	None:intergenic
CTTGGTGAAAATTATTGTGG+TGG	0.626462	4.2:-27366824	MS.gene56509:CDS
GAGAGAGTGAGGTAGTGACG+AGG	0.630169	4.2:+27367300	None:intergenic
ATACAAGGAGATGATTGTGG+TGG	0.648255	4.2:+27367191	None:intergenic
GTGGAAGACGCTGTAGGTGA+TGG	0.650170	4.2:+27367119	None:intergenic
GAAGTCGTGGAAGACGCTGT+AGG	0.656732	4.2:+27367113	None:intergenic
GAAGAAGACGACAAATGCAA+CGG	0.671477	4.2:+27367014	None:intergenic
CTAGCAAATACGTCACAAGA+GGG	0.673611	4.2:+27366857	None:intergenic
GGTGTTGTACATACACTGCA+AGG	0.675211	4.2:-27366599	MS.gene56509:CDS
ATACACTGCAAGGAGAAGCA+TGG	0.683446	4.2:-27366589	MS.gene56509:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATTATGCTTTACAATATTG+TGG	-	chr4.2:27367250-27367269	MS.gene56509:CDS	20.0%
!!	TTACAATATTGTGGTTAATA+CGG	-	chr4.2:27367259-27367278	MS.gene56509:CDS	20.0%
!!!	TTCTTCATCTTTTTTCTATT+TGG	-	chr4.2:27366885-27366904	MS.gene56509:CDS	20.0%
!	AAACATAACATAACCAAGTT+AGG	+	chr4.2:27366975-27366994	None:intergenic	25.0%
!	AACATAACATAACCAAGTTA+GGG	+	chr4.2:27366974-27366993	None:intergenic	25.0%
!	AGCATAATAATAGCAAGTAT+AGG	+	chr4.2:27367239-27367258	None:intergenic	25.0%
!!	TGTCAACCTTTTTATTGTTT+GGG	-	chr4.2:27367150-27367169	MS.gene56509:CDS	25.0%
!!	TTGTCAACCTTTTTATTGTT+TGG	-	chr4.2:27367149-27367168	MS.gene56509:CDS	25.0%
!!!	GAAAGTTTTTGGAAAAGTAT+TGG	+	chr4.2:27366647-27366666	None:intergenic	25.0%
	AATTGGTGAATGGAATGAAA+AGG	-	chr4.2:27367120-27367139	MS.gene56509:CDS	30.0%
	AATTTGGGAAGGAAAAAGAT+GGG	-	chr4.2:27367330-27367349	MS.gene56509:CDS	30.0%
	CAAGAACCCAAACAATAAAA+AGG	+	chr4.2:27367159-27367178	None:intergenic	30.0%
	CTTGGTTATGTTATGTTTCA+TGG	-	chr4.2:27366977-27366996	MS.gene56509:CDS	30.0%
	TCGTTTCTCATCATTTACTT+AGG	-	chr4.2:27366927-27366946	MS.gene56509:CDS	30.0%
	TTTCTATTTGGACTTCTCAT+TGG	-	chr4.2:27366897-27366916	MS.gene56509:CDS	30.0%
!!	CTTTTTATTGTTTGGGTTCT+TGG	-	chr4.2:27367157-27367176	MS.gene56509:CDS	30.0%
!!!	TTTTGGAAAAGTATTGGAAG+AGG	+	chr4.2:27366641-27366660	None:intergenic	30.0%
	AACTTGCAGATGTGGAATTT+GGG	-	chr4.2:27367315-27367334	MS.gene56509:CDS	35.0%
	AATGATGAAGAGGAGATACA+AGG	+	chr4.2:27366706-27366725	None:intergenic	35.0%
	AATTTCCAACTTCTCCTCAA+CGG	+	chr4.2:27367104-27367123	None:intergenic	35.0%
	AGAAGTTGGAAATTGGTGAA+TGG	-	chr4.2:27367110-27367129	MS.gene56509:CDS	35.0%
	ATTTGGGAAGGAAAAAGATG+GGG	-	chr4.2:27367331-27367350	MS.gene56509:CDS	35.0%
	CTTGGTGAAAATTATTGTGG+TGG	-	chr4.2:27367055-27367074	MS.gene56509:CDS	35.0%
	GAATTTGGGAAGGAAAAAGA+TGG	-	chr4.2:27367329-27367348	MS.gene56509:CDS	35.0%
	GATAGAACATTCCACATGTT+CGG	+	chr4.2:27366531-27366550	None:intergenic	35.0%
!	GAGCTTGGTGAAAATTATTG+TGG	-	chr4.2:27367052-27367071	MS.gene56509:CDS	35.0%
!	TTTGCTAGTTAACTTGAGCT+TGG	-	chr4.2:27367037-27367056	MS.gene56509:CDS	35.0%
!!	GAGTTGCTGTTGAAAGTTTT+TGG	+	chr4.2:27366658-27366677	None:intergenic	35.0%
	AAGTGGTTACAGTTTGGTAC+TGG	-	chr4.2:27367199-27367218	MS.gene56509:CDS	40.0%
	ACTAGCAAATACGTCACAAG+AGG	+	chr4.2:27367026-27367045	None:intergenic	40.0%
	ATAAGAAAGAGAGAGGAAGG+AGG	+	chr4.2:27366614-27366633	None:intergenic	40.0%
	ATACAAGGAGATGATTGTGG+TGG	+	chr4.2:27366691-27366710	None:intergenic	40.0%
	CCTCAAAACTAACCCTAACT+TGG	-	chr4.2:27366959-27366978	MS.gene56509:CDS	40.0%
	CTAGCAAATACGTCACAAGA+GGG	+	chr4.2:27367025-27367044	None:intergenic	40.0%
	GAACTTGCAGATGTGGAATT+TGG	-	chr4.2:27367314-27367333	MS.gene56509:CDS	40.0%
	GAAGAAGACGACAAATGCAA+CGG	+	chr4.2:27366868-27366887	None:intergenic	40.0%
	GAGATACAAGGAGATGATTG+TGG	+	chr4.2:27366694-27366713	None:intergenic	40.0%
	GGTGAAAATTATTGTGGTGG+TGG	-	chr4.2:27367058-27367077	MS.gene56509:CDS	40.0%
	GGTGAATGGAATGAAAAGGT+TGG	-	chr4.2:27367124-27367143	MS.gene56509:CDS	40.0%
	GTTGAGGAGAAGTTGGAAAT+TGG	-	chr4.2:27367103-27367122	MS.gene56509:CDS	40.0%
	TACAAGGAGATGATTGTGGT+GGG	+	chr4.2:27366690-27366709	None:intergenic	40.0%
	TGCAAGAGAGAATGATGAAG+AGG	+	chr4.2:27366716-27366735	None:intergenic	40.0%
!	CTTCTTTGAGTTTGACTGGT+CGG	+	chr4.2:27366797-27366816	None:intergenic	40.0%
!!	AGGAAGTGATGATGGATTTG+AGG	+	chr4.2:27366821-27366840	None:intergenic	40.0%
!!	GGAAAAGTATTGGAAGAGGA+GGG	+	chr4.2:27366637-27366656	None:intergenic	40.0%
!!	GGAAGTGATGATGGATTTGA+GGG	+	chr4.2:27366820-27366839	None:intergenic	40.0%
!!	TGGAAAAGTATTGGAAGAGG+AGG	+	chr4.2:27366638-27366657	None:intergenic	40.0%
!!!	CCAAGTTAGGGTTAGTTTTG+AGG	+	chr4.2:27366962-27366981	None:intergenic	40.0%
!!!	GGTTAGTTTTGAGGTCAACA+TGG	+	chr4.2:27366953-27366972	None:intergenic	40.0%
	ACAAGGAGATGATTGTGGTG+GGG	+	chr4.2:27366689-27366708	None:intergenic	45.0%
	AGGAGGGATAAGAAAGAGAG+AGG	+	chr4.2:27366621-27366640	None:intergenic	45.0%
	ATACACTGCAAGGAGAAGCA+TGG	-	chr4.2:27367290-27367309	MS.gene56509:CDS	45.0%
	GCAGCTAAGTGGTTACAGTT+TGG	-	chr4.2:27367193-27367212	MS.gene56509:CDS	45.0%
	GGGATAAGAAAGAGAGAGGA+AGG	+	chr4.2:27366617-27366636	None:intergenic	45.0%
	GTGATATTGCTGCAGCTAAG+TGG	-	chr4.2:27367182-27367201	MS.gene56509:CDS	45.0%
	TGCAGATGTGGAATTTGGGA+AGG	-	chr4.2:27367319-27367338	MS.gene56509:CDS	45.0%
	TTGAACCGTTGAGGAGAAGT+TGG	-	chr4.2:27367096-27367115	MS.gene56509:CDS	45.0%
!	AGGGCTTCTTTGAGTTTGAC+TGG	+	chr4.2:27366801-27366820	None:intergenic	45.0%
!	GGTGTTGTACATACACTGCA+AGG	-	chr4.2:27367280-27367299	MS.gene56509:CDS	45.0%
!!	TGTGGTGGTGGAATCAAGTT+GGG	-	chr4.2:27367070-27367089	MS.gene56509:CDS	45.0%
!!	TTGTGGTGGTGGAATCAAGT+TGG	-	chr4.2:27367069-27367088	MS.gene56509:CDS	45.0%
	AGAGAGGAAGGAGGAAGATG+AGG	+	chr4.2:27366605-27366624	None:intergenic	50.0%
	CTCTCTTGCATCATCGCCTT+TGG	-	chr4.2:27366726-27366745	MS.gene56509:CDS	50.0%
	CTGGTCGGTTAAAGAAGTCG+TGG	+	chr4.2:27366782-27366801	None:intergenic	50.0%
	GACGACAAATGCAACGGTTG+CGG	+	chr4.2:27366862-27366881	None:intergenic	50.0%
	GAGAGGAAGGAGGAAGATGA+GGG	+	chr4.2:27366604-27366623	None:intergenic	50.0%
	GCATGGTGAACTTGCAGATG+TGG	-	chr4.2:27367307-27367326	MS.gene56509:CDS	50.0%
	GGGGAAGAAGGAAGTGATGA+TGG	+	chr4.2:27366829-27366848	None:intergenic	50.0%
!	GATGATTGTGGTGGGGTTTG+TGG	+	chr4.2:27366682-27366701	None:intergenic	50.0%
!!	GTGGTGGTGGAATCAAGTTG+GGG	-	chr4.2:27367071-27367090	MS.gene56509:CDS	50.0%
!!!	GTTGGGGTTTTGAACCGTTG+AGG	-	chr4.2:27367087-27367106	MS.gene56509:CDS	50.0%
	GAAGTCGTGGAAGACGCTGT+AGG	+	chr4.2:27366769-27366788	None:intergenic	55.0%
	GACAAATGCAACGGTTGCGG+TGG	+	chr4.2:27366859-27366878	None:intergenic	55.0%
	GAGAGAGTGAGGTAGTGACG+AGG	+	chr4.2:27366582-27366601	None:intergenic	55.0%
	GGAAGATGAGGGAGAGAGTG+AGG	+	chr4.2:27366593-27366612	None:intergenic	55.0%
	GTGGAAGACGCTGTAGGTGA+TGG	+	chr4.2:27366763-27366782	None:intergenic	55.0%
!	GATGGTGATGACAGCGCCAA+AGG	+	chr4.2:27366745-27366764	None:intergenic	55.0%
	AACGGTTGCGGTGGCGAGGA+GGG	+	chr4.2:27366850-27366869	None:intergenic	65.0%
	ATGCAACGGTTGCGGTGGCG+AGG	+	chr4.2:27366854-27366873	None:intergenic	65.0%
	ACGGTTGCGGTGGCGAGGAG+GGG	+	chr4.2:27366849-27366868	None:intergenic	70.0%
	CAACGGTTGCGGTGGCGAGG+AGG	+	chr4.2:27366851-27366870	None:intergenic	70.0%
	GGTGGCGAGGAGGGGGAAGA+AGG	+	chr4.2:27366841-27366860	None:intergenic	70.0%
	CGGTTGCGGTGGCGAGGAGG+GGG	+	chr4.2:27366848-27366867	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	27366522	27367379	27366522	ID=MS.gene56509
chr4.2	mRNA	27366522	27367379	27366522	ID=MS.gene56509.t1;Parent=MS.gene56509
chr4.2	exon	27366522	27367379	27366522	ID=MS.gene56509.t1.exon1;Parent=MS.gene56509.t1
chr4.2	CDS	27366522	27367379	27366522	ID=cds.MS.gene56509.t1;Parent=MS.gene56509.t1

Gene Sequence

>MS.gene56509

ATGGCTCCGAACATGTGGAATGTTCTATCAGAATCTAAAAGCATAGTAAATGCTCAACCTCGTCACTACCTCACTCTCTCCCTCATCTTCCTCCTTCCTCTCTCTTTCTTATCCCTCCTCTTCCAATACTTTTCCAAAAACTTTCAACAGCAACTCTCCACAAACCCCACCACAATCATCTCCTTGTATCTCCTCTTCATCATTCTCTCTTGCATCATCGCCTTTGGCGCTGTCATCACCATCACCTACAGCGTCTTCCACGACTTCTTTAACCGACCAGTCAAACTCAAAGAAGCCCTCAAATCCATCATCACTTCCTTCTTCCCCCTCCTCGCCACCGCAACCGTTGCATTTGTCGTCTTCTTCTTCATCTTTTTTCTATTTGGACTTCTCATTGGACTTGTATCGTTTCTCATCATTTACTTAGGCCATGTTGACCTCAAAACTAACCCTAACTTGGTTATGTTATGTTTCATGGTACTTTTCATGATTGTTTTACTCCCTCTTGTGACGTATTTGCTAGTTAACTTGAGCTTGGTGAAAATTATTGTGGTGGTGGAATCAAGTTGGGGTTTTGAACCGTTGAGGAGAAGTTGGAAATTGGTGAATGGAATGAAAAGGTTGGTTTTGTCAACCTTTTTATTGTTTGGGTTCTTGGAAGTGATATTGCTGCAGCTAAGTGGTTACAGTTTGGTACTGGTTTTAGTGATTACTCCTATACTTGCTATTATTATGCTTTACAATATTGTGGTTAATACGGTGTTGTACATACACTGCAAGGAGAAGCATGGTGAACTTGCAGATGTGGAATTTGGGAAGGAAAAAGATGGGGCTAACTTGTCCTTAATTCCAGTATAG

Protein sequence

>MS.gene56509.t1

MAPNMWNVLSESKSIVNAQPRHYLTLSLIFLLPLSFLSLLFQYFSKNFQQQLSTNPTTIISLYLLFIILSCIIAFGAVITITYSVFHDFFNRPVKLKEALKSIITSFFPLLATATVAFVVFFFIFFLFGLLIGLVSFLIIYLGHVDLKTNPNLVMLCFMVLFMIVLLPLVTYLLVNLSLVKIIVVVESSWGFEPLRRSWKLVNGMKRLVLSTFLLFGFLEVILLQLSGYSLVLVLVITPILAIIMLYNIVVNTVLYIHCKEKHGELADVEFGKEKDGANLSLIPV