Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60871.t1 | XP_003591834.1 | 96.8 | 312 | 10 | 0 | 1 | 312 | 1 | 312 | 1.20E-165 | 592.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60871.t1 | P13994 | 48.3 | 261 | 126 | 5 | 11 | 263 | 8 | 267 | 3.9e-56 | 219.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60871.t1 | G7I4X2 | 96.8 | 312 | 10 | 0 | 1 | 312 | 1 | 312 | 8.7e-166 | 592.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene60871 | 0.809899 | 1.51E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene60871 | 0.806692 | 7.27E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene60871 | 0.829572 | 4.78E-55 | -1.69E-46 |
| MS.gene049378 | MS.gene60871 | 0.802699 | 4.96E-49 | -1.69E-46 |
| MS.gene049419 | MS.gene60871 | -0.840893 | 6.61E-58 | -1.69E-46 |
| MS.gene049499 | MS.gene60871 | 0.802322 | 5.93E-49 | -1.69E-46 |
| MS.gene049669 | MS.gene60871 | 0.80203 | 6.81E-49 | -1.69E-46 |
| MS.gene04991 | MS.gene60871 | -0.812201 | 4.78E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene60871 | 0.849665 | 2.80E-60 | -1.69E-46 |
| MS.gene050105 | MS.gene60871 | 0.836028 | 1.19E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene60871 | 0.816001 | 6.93E-52 | -1.69E-46 |
| MS.gene051122 | MS.gene60871 | 0.869928 | 2.14E-66 | -1.69E-46 |
| MS.gene051184 | MS.gene60871 | 0.817008 | 4.12E-52 | -1.69E-46 |
| MS.gene051368 | MS.gene60871 | 0.816092 | 6.61E-52 | -1.69E-46 |
| MS.gene051452 | MS.gene60871 | 0.801609 | 8.31E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene60871 | 0.806632 | 7.49E-50 | -1.69E-46 |
| MS.gene051655 | MS.gene60871 | 0.842863 | 1.99E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene60871 | 0.81308 | 3.07E-51 | -1.69E-46 |
| MS.gene05216 | MS.gene60871 | 0.801051 | 1.08E-48 | -1.69E-46 |
| MS.gene052586 | MS.gene60871 | 0.824403 | 8.22E-54 | -1.69E-46 |
| MS.gene052674 | MS.gene60871 | 0.831755 | 1.39E-55 | -1.69E-46 |
| MS.gene052675 | MS.gene60871 | 0.826462 | 2.68E-54 | -1.69E-46 |
| MS.gene052677 | MS.gene60871 | 0.834708 | 2.56E-56 | -1.69E-46 |
| MS.gene052954 | MS.gene60871 | 0.833357 | 5.59E-56 | -1.69E-46 |
| MS.gene053006 | MS.gene60871 | 0.808517 | 2.98E-50 | -1.69E-46 |
| MS.gene053094 | MS.gene60871 | 0.805122 | 1.55E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene60871 | 0.803201 | 3.90E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene60871 | 0.837294 | 5.66E-57 | -1.69E-46 |
| MS.gene053340 | MS.gene60871 | 0.823936 | 1.06E-53 | -1.69E-46 |
| MS.gene053963 | MS.gene60871 | 0.863179 | 2.99E-64 | -1.69E-46 |
| MS.gene054222 | MS.gene60871 | 0.805586 | 1.24E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene60871 | 0.864407 | 1.24E-64 | -1.69E-46 |
| MS.gene054892 | MS.gene60871 | 0.811823 | 5.77E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene60871 | 0.819254 | 1.28E-52 | -1.69E-46 |
| MS.gene055147 | MS.gene60871 | 0.814261 | 1.69E-51 | -1.69E-46 |
| MS.gene055225 | MS.gene60871 | 0.823486 | 1.35E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene60871 | 0.845752 | 3.34E-59 | -1.69E-46 |
| MS.gene056506 | MS.gene60871 | 0.806209 | 9.19E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene60871 | 0.802375 | 5.78E-49 | -1.69E-46 |
| MS.gene056779 | MS.gene60871 | 0.807511 | 4.88E-50 | -1.69E-46 |
| MS.gene056849 | MS.gene60871 | 0.825517 | 4.49E-54 | -1.69E-46 |
| MS.gene056986 | MS.gene60871 | 0.832077 | 1.16E-55 | -1.69E-46 |
| MS.gene057155 | MS.gene60871 | 0.824388 | 8.29E-54 | -1.69E-46 |
| MS.gene057208 | MS.gene60871 | 0.82355 | 1.30E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene60871 | 0.808566 | 2.91E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene60871 | 0.801975 | 6.99E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene60871 | 0.825168 | 5.43E-54 | -1.69E-46 |
| MS.gene058159 | MS.gene60871 | 0.811243 | 7.72E-51 | -1.69E-46 |
| MS.gene058223 | MS.gene60871 | -0.831395 | 1.71E-55 | -1.69E-46 |
| MS.gene058279 | MS.gene60871 | 0.811585 | 6.51E-51 | -1.69E-46 |
| MS.gene058429 | MS.gene60871 | 0.821128 | 4.76E-53 | -1.69E-46 |
| MS.gene058595 | MS.gene60871 | 0.800484 | 1.41E-48 | -1.69E-46 |
| MS.gene05952 | MS.gene60871 | 0.816384 | 5.69E-52 | -1.69E-46 |
| MS.gene059952 | MS.gene60871 | 0.840269 | 9.62E-58 | -1.69E-46 |
| MS.gene060259 | MS.gene60871 | 0.810453 | 1.14E-50 | -1.69E-46 |
| MS.gene060520 | MS.gene60871 | 0.81534 | 9.72E-52 | -1.69E-46 |
| MS.gene060527 | MS.gene60871 | 0.816123 | 6.50E-52 | -1.69E-46 |
| MS.gene060840 | MS.gene60871 | 0.842957 | 1.88E-58 | -1.69E-46 |
| MS.gene060850 | MS.gene60871 | 0.84204 | 3.30E-58 | -1.69E-46 |
| MS.gene060851 | MS.gene60871 | 0.860982 | 1.41E-63 | -1.69E-46 |
| MS.gene060852 | MS.gene60871 | 0.860731 | 1.68E-63 | -1.69E-46 |
| MS.gene060879 | MS.gene60871 | 0.828001 | 1.15E-54 | -1.69E-46 |
| MS.gene060933 | MS.gene60871 | 0.804467 | 2.13E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene60871 | 0.822665 | 2.10E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene60871 | 0.834904 | 2.29E-56 | -1.69E-46 |
| MS.gene06121 | MS.gene60871 | 0.802209 | 6.25E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60871.t1 | MTR_1g093770 | 96.795 | 312 | 10 | 0 | 1 | 312 | 1 | 312 | 0.0 | 626 |
| MS.gene60871.t1 | MTR_2g070740 | 30.000 | 200 | 121 | 5 | 11 | 205 | 8 | 193 | 5.32e-21 | 91.7 |
| MS.gene60871.t1 | MTR_8g008730 | 30.000 | 200 | 121 | 5 | 11 | 205 | 8 | 193 | 9.64e-21 | 89.7 |
| MS.gene60871.t1 | MTR_8g008730 | 30.000 | 200 | 121 | 5 | 11 | 205 | 8 | 193 | 1.55e-20 | 90.5 |
| MS.gene60871.t1 | MTR_3g101280 | 70.370 | 54 | 11 | 1 | 32 | 85 | 51 | 99 | 5.09e-20 | 86.7 |
| MS.gene60871.t1 | MTR_1g073720 | 29.000 | 200 | 121 | 6 | 11 | 205 | 8 | 191 | 1.24e-17 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60871.t1 | AT1G25682 | 72.669 | 311 | 82 | 2 | 1 | 311 | 1 | 308 | 3.36e-169 | 472 |
| MS.gene60871.t1 | AT1G25682 | 72.669 | 311 | 82 | 2 | 1 | 311 | 1 | 308 | 3.36e-169 | 472 |
| MS.gene60871.t1 | AT1G25988 | 74.359 | 78 | 20 | 0 | 103 | 180 | 27 | 104 | 1.47e-35 | 127 |
| MS.gene60871.t1 | AT1G17130 | 28.502 | 207 | 129 | 5 | 11 | 212 | 8 | 200 | 5.80e-19 | 86.3 |
| MS.gene60871.t1 | AT1G17130 | 27.570 | 214 | 129 | 5 | 11 | 212 | 8 | 207 | 4.70e-18 | 83.6 |
| MS.gene60871.t1 | AT3G43250 | 33.945 | 109 | 58 | 3 | 11 | 117 | 8 | 104 | 1.91e-13 | 69.3 |
Find 73 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGGGTATCTTGATTATA+AGG | 0.255625 | 1.3:-65181491 | MS.gene60871:intron |
| GACGGGCAATCCAGGGAATA+TGG | 0.258001 | 1.3:+65179532 | None:intergenic |
| ATCACATACTCACAGTTCTT+TGG | 0.264942 | 1.3:+65180332 | None:intergenic |
| TGGTGTTCAAGGCGGTAAAA+TGG | 0.307792 | 1.3:+65179933 | None:intergenic |
| ACCTGGCTTGGATCCCATTC+TGG | 0.311079 | 1.3:+65181653 | None:intergenic |
| TTGAGATGCCTTATAATATA+TGG | 0.313340 | 1.3:-65181017 | MS.gene60871:CDS |
| CCTCCGCACCATATATTATA+AGG | 0.317386 | 1.3:+65181009 | None:intergenic |
| TTTCTAGTGTCTTGCATTCA+TGG | 0.318374 | 1.3:+65179361 | None:intergenic |
| GAGAGCAAGGAAGTTAGATC+AGG | 0.349867 | 1.3:-65181508 | MS.gene60871:CDS |
| TCTACAGCATGCAGCTTTCA+TGG | 0.350388 | 1.3:+65180379 | None:intergenic |
| AAGCGCAGCATCTAGCCTTT+TGG | 0.353767 | 1.3:-65179450 | MS.gene60871:CDS |
| CAAGTAACATACTCTAAGTT+TGG | 0.373219 | 1.3:+65179800 | None:intergenic |
| AATCTTCCTCCTGGTGTTCA+AGG | 0.398061 | 1.3:+65179922 | None:intergenic |
| GCATCTAGGAAAAGGGGCCT+TGG | 0.407781 | 1.3:-65179668 | MS.gene60871:CDS |
| GGCATAGTCTTCCGAATGTC+TGG | 0.414464 | 1.3:+65179842 | None:intergenic |
| ATGGATGAGACGGGCAATCC+AGG | 0.417753 | 1.3:+65179524 | None:intergenic |
| GGTTCTCTGAACAAGTTTCA+TGG | 0.426891 | 1.3:-65181549 | MS.gene60871:CDS |
| GCTTCTTCTCTGCATTGAAC+CGG | 0.428388 | 1.3:+65180959 | None:intergenic |
| GTTCTTTGGATCAGTTTGAA+TGG | 0.451321 | 1.3:+65180346 | None:intergenic |
| CATCTAGGAAAAGGGGCCTT+GGG | 0.455684 | 1.3:-65179667 | MS.gene60871:CDS |
| TGTTCTGTCAAGCAGGCAAA+AGG | 0.461856 | 1.3:-65179390 | MS.gene60871:CDS |
| CGCTGGAGACGCACAAGCAC+TGG | 0.464581 | 1.3:+65179876 | None:intergenic |
| AAGAAGCTGCATCTAGGAAA+AGG | 0.464590 | 1.3:-65179676 | MS.gene60871:CDS |
| AGAAGCTGCATCTAGGAAAA+GGG | 0.469824 | 1.3:-65179675 | MS.gene60871:CDS |
| CTATGATTGCAAAGGGTGTC+CGG | 0.472676 | 1.3:-65180978 | MS.gene60871:CDS |
| ATGCAGAGAAGAAGCAAGTT+GGG | 0.475460 | 1.3:-65180951 | MS.gene60871:CDS |
| GCACGCAAATATACCTGGCT+TGG | 0.482555 | 1.3:+65181641 | None:intergenic |
| AATGTCTGATGCCAGACATT+CGG | 0.487929 | 1.3:-65179853 | MS.gene60871:CDS |
| GTCTGGCATCAGACATTCGC+TGG | 0.492170 | 1.3:+65179859 | None:intergenic |
| ACGGGCAATCCAGGGAATAT+GGG | 0.497967 | 1.3:+65179533 | None:intergenic |
| GCAGCATCTTGTTCTGAAGC+TGG | 0.501516 | 1.3:+65179632 | None:intergenic |
| GAAAGCTGCATGCTGTAGAC+AGG | 0.504885 | 1.3:-65180375 | MS.gene60871:CDS |
| AATGCTGCTCCCATATTCCC+TGG | 0.508968 | 1.3:-65179542 | MS.gene60871:CDS |
| CTGAAGAAGAAGCTGCATCT+AGG | 0.513065 | 1.3:-65179682 | MS.gene60871:CDS |
| TCCAGAATGGGATCCAAGCC+AGG | 0.514395 | 1.3:-65181654 | MS.gene60871:intron |
| CAGCCTTCTCTTACCAGACA+TGG | 0.522667 | 1.3:+65179505 | None:intergenic |
| GTTTATACCCTCCAGCCAAA+AGG | 0.523272 | 1.3:+65179435 | None:intergenic |
| TTGCCCGTCTCATCCATGTC+TGG | 0.524578 | 1.3:-65179518 | MS.gene60871:CDS |
| GAGGGTATAAACCGTCATCT+TGG | 0.526453 | 1.3:-65179424 | MS.gene60871:CDS |
| TGCAATTCTATGATTGCAAA+GGG | 0.527726 | 1.3:-65180985 | MS.gene60871:CDS |
| TTCGAGTTACCTGCTGATGA+AGG | 0.528478 | 1.3:-65180254 | MS.gene60871:intron |
| AATGCAGAGAAGAAGCAAGT+TGG | 0.531409 | 1.3:-65180952 | MS.gene60871:CDS |
| TAAACCGTCATCTTGGTCAC+AGG | 0.534179 | 1.3:-65179417 | MS.gene60871:CDS |
| AGGGAGCTGTTCTGTCAAGC+AGG | 0.536545 | 1.3:-65179397 | MS.gene60871:CDS |
| CTTCCTTGCTCTCTCTCTCA+AGG | 0.536908 | 1.3:+65181518 | None:intergenic |
| TCATGCACACCTTCATCAGC+AGG | 0.543966 | 1.3:+65180245 | None:intergenic |
| AAATTTGTGTTACAGAGAGA+GGG | 0.546667 | 1.3:-65179968 | MS.gene60871:intron |
| AACATACTCTAAGTTTGGCC+CGG | 0.552541 | 1.3:+65179805 | None:intergenic |
| CATGTCTGGTAAGAGAAGGC+TGG | 0.552595 | 1.3:-65179504 | MS.gene60871:CDS |
| TGGATGAGACGGGCAATCCA+GGG | 0.561142 | 1.3:+65179525 | None:intergenic |
| GAACTTCACTTTCGCTGCTG+CGG | 0.562222 | 1.3:+65179610 | None:intergenic |
| GTTCTGTCAAGCAGGCAAAA+GGG | 0.575210 | 1.3:-65179389 | MS.gene60871:CDS |
| ATGCCTTGAGAGAGAGAGCA+AGG | 0.581873 | 1.3:-65181521 | MS.gene60871:CDS |
| ATGCAATTCTATGATTGCAA+AGG | 0.583657 | 1.3:-65180986 | MS.gene60871:CDS |
| ATCTGCTCTAGCAGCTGCAA+GGG | 0.592187 | 1.3:+65181691 | None:intergenic |
| TATCTGCTCTAGCAGCTGCA+AGG | 0.592633 | 1.3:+65181690 | None:intergenic |
| CTTACCAGACATGGATGAGA+CGG | 0.598118 | 1.3:+65179514 | None:intergenic |
| CATCCATGTCTGGTAAGAGA+AGG | 0.598795 | 1.3:-65179508 | MS.gene60871:CDS |
| TTACCAGACATGGATGAGAC+GGG | 0.611020 | 1.3:+65179515 | None:intergenic |
| AGAGCAAGGAAGTTAGATCA+GGG | 0.613858 | 1.3:-65181507 | MS.gene60871:CDS |
| GAAGCTGCATCTAGGAAAAG+GGG | 0.615335 | 1.3:-65179674 | MS.gene60871:CDS |
| GTGAGTATGTGATCATCAGT+GGG | 0.620162 | 1.3:-65180322 | MS.gene60871:CDS |
| CCTTATAATATATGGTGCGG+AGG | 0.625854 | 1.3:-65181009 | MS.gene60871:CDS |
| GCTCCCTGTGACCAAGATGA+CGG | 0.632091 | 1.3:+65179413 | None:intergenic |
| ATGCCTTATAATATATGGTG+CGG | 0.650909 | 1.3:-65181012 | MS.gene60871:CDS |
| CTGGAAGCAGTCGAATCCCA+AGG | 0.652032 | 1.3:+65179651 | None:intergenic |
| AAACCGTCATCTTGGTCACA+GGG | 0.655559 | 1.3:-65179416 | MS.gene60871:CDS |
| TGTGAGTATGTGATCATCAG+TGG | 0.657354 | 1.3:-65180323 | MS.gene60871:CDS |
| TGGCTTGGATCCCATTCTGG+AGG | 0.660594 | 1.3:+65181656 | None:intergenic |
| CTTCCTCCTGGTGTTCAAGG+CGG | 0.672392 | 1.3:+65179925 | None:intergenic |
| TTACCGCCTTGAACACCAGG+AGG | 0.712713 | 1.3:-65179928 | MS.gene60871:CDS |
| TGGGAATTACTACTCTACGA+AGG | 0.715974 | 1.3:-65180932 | MS.gene60871:intron |
| TGAGTATGTGATCATCAGTG+GGG | 0.814262 | 1.3:-65180321 | MS.gene60871:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCATTTTTTTAAACAA+AGG | - | chr1.3:65180979-65180998 | MS.gene60871:CDS | 10.0% |
| !! | ATTAGATAATATGGAATAAA+AGG | + | chr1.3:65180777-65180796 | None:intergenic | 15.0% |
| !!! | TATATGTACATATATTGATT+TGG | - | chr1.3:65181636-65181655 | MS.gene60871:intron | 15.0% |
| !! | AATACGTAGAATTAGAATAT+GGG | - | chr1.3:65179631-65179650 | MS.gene60871:CDS | 20.0% |
| !! | ACACTTGAAAATAATATGTA+AGG | + | chr1.3:65181209-65181228 | None:intergenic | 20.0% |
| !! | AGATTTGAAAAAAAAGAAAC+AGG | - | chr1.3:65181926-65181945 | MS.gene60871:intron | 20.0% |
| !! | CATCAAATTTATCAGAATTA+GGG | - | chr1.3:65179410-65179429 | MS.gene60871:CDS | 20.0% |
| !!! | AAAAGCATTAAACTTGTTAA+AGG | + | chr1.3:65181765-65181784 | None:intergenic | 20.0% |
| !!! | AAAGCATTAAACTTGTTAAA+GGG | + | chr1.3:65181764-65181783 | None:intergenic | 20.0% |
| !!! | AAGTGTTTAATTTCTATTGT+CGG | - | chr1.3:65179988-65180007 | MS.gene60871:intron | 20.0% |
| !!! | AGTTACATTTTTTTTTCTTG+TGG | + | chr1.3:65180041-65180060 | None:intergenic | 20.0% |
| !!! | ATCATAATGGATCATTAAAT+TGG | + | chr1.3:65180598-65180617 | None:intergenic | 20.0% |
| !!! | ATCTTTTAAAACCATGTATT+GGG | + | chr1.3:65179759-65179778 | None:intergenic | 20.0% |
| !!! | ATTTTATAAGTTATACGACA+TGG | - | chr1.3:65179657-65179676 | MS.gene60871:CDS | 20.0% |
| !!! | GTAAATTCTAGTTTTGATTA+TGG | - | chr1.3:65179486-65179505 | MS.gene60871:CDS | 20.0% |
| !!! | TATCTTTTAAAACCATGTAT+TGG | + | chr1.3:65179760-65179779 | None:intergenic | 20.0% |
| ! | AAGTTGAAAAAAGTTTGTCA+TGG | + | chr1.3:65181113-65181132 | None:intergenic | 25.0% |
| ! | AATCACTATTAGACTATAAC+TGG | + | chr1.3:65181176-65181195 | None:intergenic | 25.0% |
| ! | ACATGTAATATGAGTACTTA+TGG | - | chr1.3:65179953-65179972 | MS.gene60871:CDS | 25.0% |
| ! | AGAATGGTCATTAGATAATA+TGG | + | chr1.3:65180786-65180805 | None:intergenic | 25.0% |
| ! | ATACGTAGAATTAGAATATG+GGG | - | chr1.3:65179632-65179651 | MS.gene60871:CDS | 25.0% |
| ! | ATATGCTAAATGAAACAATG+TGG | - | chr1.3:65180476-65180495 | MS.gene60871:intron | 25.0% |
| ! | ATTTATCAGAATTAGGGTTA+AGG | - | chr1.3:65179416-65179435 | MS.gene60871:CDS | 25.0% |
| ! | CAAATGCAAGTTAAGTTTAT+TGG | + | chr1.3:65180101-65180120 | None:intergenic | 25.0% |
| ! | CTAGTAAGTTTGACAAAAAT+AGG | - | chr1.3:65182244-65182263 | MS.gene60871:intron | 25.0% |
| ! | GAATACGTAGAATTAGAATA+TGG | - | chr1.3:65179630-65179649 | MS.gene60871:CDS | 25.0% |
| ! | GATGATATATTCTTCATGAA+TGG | - | chr1.3:65179451-65179470 | MS.gene60871:CDS | 25.0% |
| ! | GCATCAAATTTATCAGAATT+AGG | - | chr1.3:65179409-65179428 | MS.gene60871:CDS | 25.0% |
| ! | TAAAATAAAATAGCCCAGAT+TGG | + | chr1.3:65180751-65180770 | None:intergenic | 25.0% |
| ! | TAAGTTTGACAAAAATAGGA+AGG | - | chr1.3:65182248-65182267 | MS.gene60871:intron | 25.0% |
| ! | TAATCATTAACGTGTTTATC+TGG | - | chr1.3:65181405-65181424 | MS.gene60871:intron | 25.0% |
| ! | TAATGAGTTATGAAGACAAA+TGG | + | chr1.3:65180415-65180434 | None:intergenic | 25.0% |
| ! | TACAGAGAATAAAGGATTTA+CGG | + | chr1.3:65180456-65180475 | None:intergenic | 25.0% |
| ! | TAGCATATTACAGAGAATAA+AGG | + | chr1.3:65180464-65180483 | None:intergenic | 25.0% |
| ! | TTGAGATGCCTTATAATATA+TGG | - | chr1.3:65180813-65180832 | MS.gene60871:intron | 25.0% |
| !! | AGATTATGTTGCTTGATTAT+GGG | - | chr1.3:65179779-65179798 | MS.gene60871:intron | 25.0% |
| !! | TAACTTGTATGTATTTGATG+TGG | - | chr1.3:65180056-65180075 | MS.gene60871:intron | 25.0% |
| !! | TAGATTATGTTGCTTGATTA+TGG | - | chr1.3:65179778-65179797 | MS.gene60871:intron | 25.0% |
| !!! | CTTTTGACTCTAAGAAAATA+GGG | + | chr1.3:65182118-65182137 | None:intergenic | 25.0% |
| !!! | GAAGCATCTAATGTTTATTT+TGG | - | chr1.3:65180939-65180958 | MS.gene60871:CDS | 25.0% |
| !!! | TACATTTTTTTTTCTTGTGG+TGG | + | chr1.3:65180038-65180057 | None:intergenic | 25.0% |
| !!! | TAGTTTTGATTATGGTTTGA+TGG | - | chr1.3:65179494-65179513 | MS.gene60871:CDS | 25.0% |
| !!! | TATGAAGACAAATGGATTAA+TGG | + | chr1.3:65180407-65180426 | None:intergenic | 25.0% |
| !!! | TCATTTTTTTAAACAAAGGC+AGG | - | chr1.3:65180983-65181002 | MS.gene60871:CDS | 25.0% |
| !!! | TCTTTTAAAACCATGTATTG+GGG | + | chr1.3:65179758-65179777 | None:intergenic | 25.0% |
| !!! | TCTTTTGACTCTAAGAAAAT+AGG | + | chr1.3:65182119-65182138 | None:intergenic | 25.0% |
| AAAATTTGTGTTACAGAGAG+AGG | - | chr1.3:65181861-65181880 | MS.gene60871:intron | 30.0% | |
| AAATTTGTGTTACAGAGAGA+GGG | - | chr1.3:65181862-65181881 | MS.gene60871:intron | 30.0% | |
| AACTCATTTCTGACTATTCT+AGG | + | chr1.3:65180519-65180538 | None:intergenic | 30.0% | |
| AATGATCCATTATGATCGAA+AGG | - | chr1.3:65180602-65180621 | MS.gene60871:intron | 30.0% | |
| ATGAGTACTTATGGATATCT+TGG | - | chr1.3:65179962-65179981 | MS.gene60871:intron | 30.0% | |
| ATGATCCATTATGATCGAAA+GGG | - | chr1.3:65180603-65180622 | MS.gene60871:intron | 30.0% | |
| ATGCAATTCTATGATTGCAA+AGG | - | chr1.3:65180844-65180863 | MS.gene60871:intron | 30.0% | |
| ATGCCCTAAATAAAAATCTC+CGG | - | chr1.3:65182006-65182025 | MS.gene60871:intron | 30.0% | |
| ATGCCTTATAATATATGGTG+CGG | - | chr1.3:65180818-65180837 | MS.gene60871:intron | 30.0% | |
| ATGCTATTGCATCTTTCAAT+TGG | - | chr1.3:65181686-65181705 | MS.gene60871:CDS | 30.0% | |
| CAAGTAACATACTCTAAGTT+TGG | + | chr1.3:65182033-65182052 | None:intergenic | 30.0% | |
| TATCTAATGACCATTCTTTC+AGG | - | chr1.3:65180789-65180808 | MS.gene60871:intron | 30.0% | |
| TCACAACAACAAAGAATTCA+TGG | - | chr1.3:65179698-65179717 | MS.gene60871:CDS | 30.0% | |
| TCTAAGAAAATAGGGAAAAG+GGG | + | chr1.3:65182110-65182129 | None:intergenic | 30.0% | |
| TGCAATTCTATGATTGCAAA+GGG | - | chr1.3:65180845-65180864 | MS.gene60871:intron | 30.0% | |
| TTAATGCACTGCATTATCTT+GGG | - | chr1.3:65181344-65181363 | MS.gene60871:intron | 30.0% | |
| TTGAACCACACTATTTAGAT+TGG | + | chr1.3:65181371-65181390 | None:intergenic | 30.0% | |
| ! | ACTCTAAGAAAATAGGGAAA+AGG | + | chr1.3:65182112-65182131 | None:intergenic | 30.0% |
| ! | ATCAGGGTATCTTGATTATA+AGG | - | chr1.3:65180339-65180358 | MS.gene60871:CDS | 30.0% |
| ! | ATTGAAGGAAAGAGCTTTTA+TGG | + | chr1.3:65179734-65179753 | None:intergenic | 30.0% |
| ! | CTAGTAGATTTTAAATGCCT+GGG | - | chr1.3:65179875-65179894 | MS.gene60871:CDS | 30.0% |
| ! | CTCTAAGAAAATAGGGAAAA+GGG | + | chr1.3:65182111-65182130 | None:intergenic | 30.0% |
| ! | GATTATGTTGCTTGATTATG+GGG | - | chr1.3:65179780-65179799 | MS.gene60871:intron | 30.0% |
| ! | TCATGAATGGACTCAATTAA+TGG | - | chr1.3:65179464-65179483 | MS.gene60871:CDS | 30.0% |
| ! | TCTAGTAGATTTTAAATGCC+TGG | - | chr1.3:65179874-65179893 | MS.gene60871:CDS | 30.0% |
| ! | TTGAAGGAAAGAGCTTTTAT+GGG | + | chr1.3:65179733-65179752 | None:intergenic | 30.0% |
| ! | TTGATGGATGATCAAATTGA+TGG | - | chr1.3:65179510-65179529 | MS.gene60871:CDS | 30.0% |
| !! | ATGTTTTATGTTGATTGTGG+AGG | - | chr1.3:65179533-65179552 | MS.gene60871:CDS | 30.0% |
| !! | TGGATGTTTTATGTTGATTG+TGG | - | chr1.3:65179530-65179549 | MS.gene60871:CDS | 30.0% |
| !!! | TTTTTTTCAAATCTTCCTCC+TGG | + | chr1.3:65181920-65181939 | None:intergenic | 30.0% |
| AAAATAGCCCAGATTGGAAA+AGG | + | chr1.3:65180745-65180764 | None:intergenic | 35.0% | |
| AAGTTTGCCTTTGAACCTTT+GGG | - | chr1.3:65181710-65181729 | MS.gene60871:intron | 35.0% | |
| AATAGCATGTCTCAAACTAC+TGG | + | chr1.3:65181674-65181693 | None:intergenic | 35.0% | |
| AATCCATAGAAAACAGCTGT+TGG | + | chr1.3:65181737-65181756 | None:intergenic | 35.0% | |
| ACAAAAATAGGAAGGACAAG+CGG | - | chr1.3:65182256-65182275 | MS.gene60871:intron | 35.0% | |
| ACACTATATTTCCTCCTTTC+AGG | - | chr1.3:65180259-65180278 | MS.gene60871:CDS | 35.0% | |
| ACTATCCCTTTCGATCATAA+TGG | + | chr1.3:65180611-65180630 | None:intergenic | 35.0% | |
| AGGGATAGTCTACTTTATGT+AGG | - | chr1.3:65180622-65180641 | MS.gene60871:intron | 35.0% | |
| AGGGTTAAGGATCAAATTGA+TGG | - | chr1.3:65179429-65179448 | MS.gene60871:CDS | 35.0% | |
| ATAGCATGTCTCAAACTACT+GGG | + | chr1.3:65181673-65181692 | None:intergenic | 35.0% | |
| ATCACATACTCACAGTTCTT+TGG | + | chr1.3:65181501-65181520 | None:intergenic | 35.0% | |
| ATTTGTGGGATGTGTAATTC+AGG | - | chr1.3:65179568-65179587 | MS.gene60871:CDS | 35.0% | |
| CACTATATTTCCTCCTTTCA+GGG | - | chr1.3:65180260-65180279 | MS.gene60871:CDS | 35.0% | |
| CTAAGAAAATAGGGAAAAGG+GGG | + | chr1.3:65182109-65182128 | None:intergenic | 35.0% | |
| GAGAATAAAGGATTTACGGT+AGG | + | chr1.3:65180452-65180471 | None:intergenic | 35.0% | |
| GGATAGTCTACTTTATGTAG+GGG | - | chr1.3:65180624-65180643 | MS.gene60871:intron | 35.0% | |
| GGGATAGTCTACTTTATGTA+GGG | - | chr1.3:65180623-65180642 | MS.gene60871:intron | 35.0% | |
| GTTAATGCACTGCATTATCT+TGG | - | chr1.3:65181343-65181362 | MS.gene60871:intron | 35.0% | |
| GTTCTTTGGATCAGTTTGAA+TGG | + | chr1.3:65181487-65181506 | None:intergenic | 35.0% | |
| TATCTGGATACATGCAGATA+TGG | - | chr1.3:65181421-65181440 | MS.gene60871:intron | 35.0% | |
| TGCCCTAAATAAAAATCTCC+GGG | - | chr1.3:65182007-65182026 | MS.gene60871:intron | 35.0% | |
| ! | ACTTTTACTTTCCTCCAGAA+TGG | - | chr1.3:65180163-65180182 | MS.gene60871:intron | 35.0% |
| ! | CTTTTACTTTCCTCCAGAAT+GGG | - | chr1.3:65180164-65180183 | MS.gene60871:intron | 35.0% |
| ! | TAGATTTTAAATGCCTGGGT+GGG | - | chr1.3:65179879-65179898 | MS.gene60871:CDS | 35.0% |
| ! | TAGTAACTGATTCACTATCG+TGG | - | chr1.3:65181814-65181833 | MS.gene60871:intron | 35.0% |
| !! | AACTGAGGATTTTGATGTTG+AGG | - | chr1.3:65181542-65181561 | MS.gene60871:CDS | 35.0% |
| !! | GAGAGTGTTGAAGAATTTGA+CGG | - | chr1.3:65179816-65179835 | MS.gene60871:CDS | 35.0% |
| AACATACTCTAAGTTTGGCC+CGG | + | chr1.3:65182028-65182047 | None:intergenic | 40.0% | |
| AAGAAGCTGCATCTAGGAAA+AGG | - | chr1.3:65182154-65182173 | MS.gene60871:intron | 40.0% | |
| AATGCAGAGAAGAAGCAAGT+TGG | - | chr1.3:65180878-65180897 | MS.gene60871:intron | 40.0% | |
| AATGTCTGATGCCAGACATT+CGG | - | chr1.3:65181977-65181996 | MS.gene60871:intron | 40.0% | |
| AGAAGCTGCATCTAGGAAAA+GGG | - | chr1.3:65182155-65182174 | MS.gene60871:intron | 40.0% | |
| AGAGCAAGGAAGTTAGATCA+GGG | - | chr1.3:65180323-65180342 | MS.gene60871:CDS | 40.0% | |
| AGGAGCTTGGAGTAAATTTG+TGG | - | chr1.3:65179553-65179572 | MS.gene60871:CDS | 40.0% | |
| ATGCAGAGAAGAAGCAAGTT+GGG | - | chr1.3:65180879-65180898 | MS.gene60871:intron | 40.0% | |
| CAAAAATAGGAAGGACAAGC+GGG | - | chr1.3:65182257-65182276 | MS.gene60871:intron | 40.0% | |
| CAAGTTTGCCTTTGAACCTT+TGG | - | chr1.3:65181709-65181728 | MS.gene60871:intron | 40.0% | |
| CCACATAGAGACAAAGATCA+GGG | + | chr1.3:65180015-65180034 | None:intergenic | 40.0% | |
| CCTCCGCACCATATATTATA+AGG | + | chr1.3:65180824-65180843 | None:intergenic | 40.0% | |
| CCTTATAATATATGGTGCGG+AGG | - | chr1.3:65180821-65180840 | MS.gene60871:intron | 40.0% | |
| CTACTTACTGGCGTGTTATA+TGG | - | chr1.3:65180649-65180668 | MS.gene60871:intron | 40.0% | |
| GCATCTCAAACCTGAAAGAA+TGG | + | chr1.3:65180802-65180821 | None:intergenic | 40.0% | |
| GGAGCTTGGAGTAAATTTGT+GGG | - | chr1.3:65179554-65179573 | MS.gene60871:CDS | 40.0% | |
| GGTAGTAATACACACACTCA+CGG | - | chr1.3:65179837-65179856 | MS.gene60871:CDS | 40.0% | |
| GGTTCTCTGAACAAGTTTCA+TGG | - | chr1.3:65180281-65180300 | MS.gene60871:CDS | 40.0% | |
| GTGAGTATGTGATCATCAGT+GGG | - | chr1.3:65181508-65181527 | MS.gene60871:CDS | 40.0% | |
| TAGCATGTCTCAAACTACTG+GGG | + | chr1.3:65181672-65181691 | None:intergenic | 40.0% | |
| TGAGTATGTGATCATCAGTG+GGG | - | chr1.3:65181509-65181528 | MS.gene60871:CDS | 40.0% | |
| TGGGAATTACTACTCTACGA+AGG | - | chr1.3:65180898-65180917 | MS.gene60871:intron | 40.0% | |
| TGGGACCAATCTAAATAGTG+TGG | - | chr1.3:65181363-65181382 | MS.gene60871:intron | 40.0% | |
| TGTGAGTATGTGATCATCAG+TGG | - | chr1.3:65181507-65181526 | MS.gene60871:CDS | 40.0% | |
| TTAAGCACAGTTGCAATGCT+AGG | + | chr1.3:65181791-65181810 | None:intergenic | 40.0% | |
| TTGTTGCACGCAAATATACC+TGG | + | chr1.3:65180197-65180216 | None:intergenic | 40.0% | |
| ! | ACAAGTTTGTTCACATGAGC+AGG | + | chr1.3:65181019-65181038 | None:intergenic | 40.0% |
| ! | AGATTTTAAATGCCTGGGTG+GGG | - | chr1.3:65179880-65179899 | MS.gene60871:CDS | 40.0% |
| ! | GTAGATTTTAAATGCCTGGG+TGG | - | chr1.3:65179878-65179897 | MS.gene60871:CDS | 40.0% |
| !! | AGAGCTTTTATGGGTTGTGA+TGG | + | chr1.3:65179724-65179743 | None:intergenic | 40.0% |
| !! | GGCCCGGAGATTTTTATTTA+GGG | + | chr1.3:65182012-65182031 | None:intergenic | 40.0% |
| !! | TGGCCCGGAGATTTTTATTT+AGG | + | chr1.3:65182013-65182032 | None:intergenic | 40.0% |
| AAAACAGCTGTTGGACCCAA+AGG | + | chr1.3:65181728-65181747 | None:intergenic | 45.0% | |
| AAACCGTCATCTTGGTCACA+GGG | - | chr1.3:65182414-65182433 | MS.gene60871:intron | 45.0% | |
| AATCTTCCTCCTGGTGTTCA+AGG | + | chr1.3:65181911-65181930 | None:intergenic | 45.0% | |
| ATAGCCCAGATTGGAAAAGG+AGG | + | chr1.3:65180742-65180761 | None:intergenic | 45.0% | |
| CATCCATGTCTGGTAAGAGA+AGG | - | chr1.3:65182322-65182341 | MS.gene60871:intron | 45.0% | |
| CCCTGATCTTTGTCTCTATG+TGG | - | chr1.3:65180012-65180031 | MS.gene60871:intron | 45.0% | |
| CTGAAGAAGAAGCTGCATCT+AGG | - | chr1.3:65182148-65182167 | MS.gene60871:intron | 45.0% | |
| CTTACCAGACATGGATGAGA+CGG | + | chr1.3:65182319-65182338 | None:intergenic | 45.0% | |
| CTTGTTCAGAGAACCCTGAA+AGG | + | chr1.3:65180276-65180295 | None:intergenic | 45.0% | |
| GAAGCTGCATCTAGGAAAAG+GGG | - | chr1.3:65182156-65182175 | MS.gene60871:intron | 45.0% | |
| GAGAGCAAGGAAGTTAGATC+AGG | - | chr1.3:65180322-65180341 | MS.gene60871:CDS | 45.0% | |
| GCCACATAGAGACAAAGATC+AGG | + | chr1.3:65180016-65180035 | None:intergenic | 45.0% | |
| GCTTCTTCTCTGCATTGAAC+CGG | + | chr1.3:65180874-65180893 | None:intergenic | 45.0% | |
| GTTCTGTCAAGCAGGCAAAA+GGG | - | chr1.3:65182441-65182460 | MS.gene60871:intron | 45.0% | |
| GTTTATACCCTCCAGCCAAA+AGG | + | chr1.3:65182398-65182417 | None:intergenic | 45.0% | |
| TAAACCGTCATCTTGGTCAC+AGG | - | chr1.3:65182413-65182432 | MS.gene60871:intron | 45.0% | |
| TCCTTCAATGCCCCAATACA+TGG | - | chr1.3:65179745-65179764 | MS.gene60871:intron | 45.0% | |
| TCTACAGCATGCAGCTTTCA+TGG | + | chr1.3:65181454-65181473 | None:intergenic | 45.0% | |
| TGGGGCTCAGAAAAAAACTG+AGG | - | chr1.3:65181527-65181546 | MS.gene60871:CDS | 45.0% | |
| TGGTGTTCAAGGCGGTAAAA+TGG | + | chr1.3:65181900-65181919 | None:intergenic | 45.0% | |
| TGTTCTGTCAAGCAGGCAAA+AGG | - | chr1.3:65182440-65182459 | MS.gene60871:intron | 45.0% | |
| TGTTGGACCCAAAGGTTCAA+AGG | + | chr1.3:65181720-65181739 | None:intergenic | 45.0% | |
| TTACCAGACATGGATGAGAC+GGG | + | chr1.3:65182318-65182337 | None:intergenic | 45.0% | |
| TTGCTTGATTATGGGGTGAG+TGG | - | chr1.3:65179787-65179806 | MS.gene60871:intron | 45.0% | |
| ! | ATGTTGATTGTGGAGGAGCT+TGG | - | chr1.3:65179540-65179559 | MS.gene60871:CDS | 45.0% |
| ! | ATTTTACCGCCTTGAACACC+AGG | - | chr1.3:65181899-65181918 | MS.gene60871:intron | 45.0% |
| ! | GAGGGTATAAACCGTCATCT+TGG | - | chr1.3:65182406-65182425 | MS.gene60871:intron | 45.0% |
| ! | TTCGAGTTACCTGCTGATGA+AGG | - | chr1.3:65181576-65181595 | MS.gene60871:intron | 45.0% |
| !! | ACCATGTATTGGGGCATTGA+AGG | + | chr1.3:65179749-65179768 | None:intergenic | 45.0% |
| !! | CTATGATTGCAAAGGGTGTC+CGG | - | chr1.3:65180852-65180871 | MS.gene60871:intron | 45.0% |
| !! | GGTCCAACAGCTGTTTTCTA+TGG | - | chr1.3:65181731-65181750 | MS.gene60871:intron | 45.0% |
| !! | TATGTAGGGGTGCTACTTAC+TGG | - | chr1.3:65180637-65180656 | MS.gene60871:intron | 45.0% |
| AATGCTGCTCCCATATTCCC+TGG | - | chr1.3:65182288-65182307 | MS.gene60871:intron | 50.0% | |
| ACGGGCAATCCAGGGAATAT+GGG | + | chr1.3:65182300-65182319 | None:intergenic | 50.0% | |
| ATCTGCTCTAGCAGCTGCAA+GGG | + | chr1.3:65180142-65180161 | None:intergenic | 50.0% | |
| ATGCCTTGAGAGAGAGAGCA+AGG | - | chr1.3:65180309-65180328 | MS.gene60871:CDS | 50.0% | |
| CAGCCTTCTCTTACCAGACA+TGG | + | chr1.3:65182328-65182347 | None:intergenic | 50.0% | |
| CATCTAGGAAAAGGGGCCTT+GGG | - | chr1.3:65182163-65182182 | MS.gene60871:intron | 50.0% | |
| CATGTCTGGTAAGAGAAGGC+TGG | - | chr1.3:65182326-65182345 | MS.gene60871:intron | 50.0% | |
| CTTCCTTGCTCTCTCTCTCA+AGG | + | chr1.3:65180315-65180334 | None:intergenic | 50.0% | |
| CTTGAAAGAGCTGAACCAGC+TGG | - | chr1.3:65180716-65180735 | MS.gene60871:intron | 50.0% | |
| GAAAGCTGCATGCTGTAGAC+AGG | - | chr1.3:65181455-65181474 | MS.gene60871:intron | 50.0% | |
| GAACTTCACTTTCGCTGCTG+CGG | + | chr1.3:65182223-65182242 | None:intergenic | 50.0% | |
| GCACGCAAATATACCTGGCT+TGG | + | chr1.3:65180192-65180211 | None:intergenic | 50.0% | |
| GGCATAGTCTTCCGAATGTC+TGG | + | chr1.3:65181991-65182010 | None:intergenic | 50.0% | |
| GTTCAGAGAACCCTGAAAGG+AGG | + | chr1.3:65180273-65180292 | None:intergenic | 50.0% | |
| TATCTGCTCTAGCAGCTGCA+AGG | + | chr1.3:65180143-65180162 | None:intergenic | 50.0% | |
| TCATGCACACCTTCATCAGC+AGG | + | chr1.3:65181588-65181607 | None:intergenic | 50.0% | |
| TTTAAATGCCTGGGTGGGGA+GGG | - | chr1.3:65179884-65179903 | MS.gene60871:CDS | 50.0% | |
| ! | CTGGCCTCCTTTTCCAATCT+GGG | - | chr1.3:65180735-65180754 | MS.gene60871:intron | 50.0% |
| ! | TTTTAAATGCCTGGGTGGGG+AGG | - | chr1.3:65179883-65179902 | MS.gene60871:CDS | 50.0% |
| !! | AAGCGCAGCATCTAGCCTTT+TGG | - | chr1.3:65182380-65182399 | MS.gene60871:intron | 50.0% |
| !! | CATCTAGCCTTTTGGCTGGA+GGG | - | chr1.3:65182388-65182407 | MS.gene60871:intron | 50.0% |
| !! | GCAGCATCTTGTTCTGAAGC+TGG | + | chr1.3:65182201-65182220 | None:intergenic | 50.0% |
| AGGGAGCTGTTCTGTCAAGC+AGG | - | chr1.3:65182433-65182452 | MS.gene60871:intron | 55.0% | |
| ATGGATGAGACGGGCAATCC+AGG | + | chr1.3:65182309-65182328 | None:intergenic | 55.0% | |
| ATTATGGGGTGAGTGGCGCT+AGG | - | chr1.3:65179794-65179813 | MS.gene60871:intron | 55.0% | |
| CTGGAAGCAGTCGAATCCCA+AGG | + | chr1.3:65182182-65182201 | None:intergenic | 55.0% | |
| CTTCCTCCTGGTGTTCAAGG+CGG | + | chr1.3:65181908-65181927 | None:intergenic | 55.0% | |
| GACGGGCAATCCAGGGAATA+TGG | + | chr1.3:65182301-65182320 | None:intergenic | 55.0% | |
| GATTGGAAAAGGAGGCCAGC+TGG | + | chr1.3:65180734-65180753 | None:intergenic | 55.0% | |
| GCAGCTACTAAGCGACAGTG+TGG | - | chr1.3:65180381-65180400 | MS.gene60871:CDS | 55.0% | |
| GCATCTAGGAAAAGGGGCCT+TGG | - | chr1.3:65182162-65182181 | MS.gene60871:intron | 55.0% | |
| GCTCCCTGTGACCAAGATGA+CGG | + | chr1.3:65182420-65182439 | None:intergenic | 55.0% | |
| GTCTGGCATCAGACATTCGC+TGG | + | chr1.3:65181974-65181993 | None:intergenic | 55.0% | |
| TCCAGAATGGGATCCAAGCC+AGG | - | chr1.3:65180176-65180195 | MS.gene60871:intron | 55.0% | |
| TGGATGAGACGGGCAATCCA+GGG | + | chr1.3:65182308-65182327 | None:intergenic | 55.0% | |
| TTACCGCCTTGAACACCAGG+AGG | - | chr1.3:65181902-65181921 | MS.gene60871:intron | 55.0% | |
| TTGCCCGTCTCATCCATGTC+TGG | - | chr1.3:65182312-65182331 | MS.gene60871:intron | 55.0% | |
| ! | TGGCTTGGATCCCATTCTGG+AGG | + | chr1.3:65180177-65180196 | None:intergenic | 55.0% |
| !! | ACCTGGCTTGGATCCCATTC+TGG | + | chr1.3:65180180-65180199 | None:intergenic | 55.0% |
| !! | GCAGCATCTAGCCTTTTGGC+TGG | - | chr1.3:65182384-65182403 | MS.gene60871:intron | 55.0% |
| !! | GCATCTAGCCTTTTGGCTGG+AGG | - | chr1.3:65182387-65182406 | MS.gene60871:intron | 55.0% |
| !! | GCTGGCCTCCTTTTCCAATC+TGG | - | chr1.3:65180734-65180753 | MS.gene60871:intron | 55.0% |
| CGCTGGAGACGCACAAGCAC+TGG | + | chr1.3:65181957-65181976 | None:intergenic | 65.0% | |
| GCCTGGGTGGGGAGGGAGTA+GGG | - | chr1.3:65179891-65179910 | MS.gene60871:CDS | 70.0% | |
| TCCCTACTCCCTCCCCACCC+AGG | + | chr1.3:65179895-65179914 | None:intergenic | 70.0% | |
| TGCCTGGGTGGGGAGGGAGT+AGG | - | chr1.3:65179890-65179909 | MS.gene60871:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 65179364 | 65182488 | 65179364 | ID=MS.gene60871 |
| chr1.3 | mRNA | 65179364 | 65182488 | 65179364 | ID=MS.gene60871.t1;Parent=MS.gene60871 |
| chr1.3 | exon | 65182486 | 65182488 | 65182486 | ID=MS.gene60871.t1.exon1;Parent=MS.gene60871.t1 |
| chr1.3 | CDS | 65182486 | 65182488 | 65182486 | ID=cds.MS.gene60871.t1;Parent=MS.gene60871.t1 |
| chr1.3 | exon | 65181655 | 65181717 | 65181655 | ID=MS.gene60871.t1.exon2;Parent=MS.gene60871.t1 |
| chr1.3 | CDS | 65181655 | 65181717 | 65181655 | ID=cds.MS.gene60871.t1;Parent=MS.gene60871.t1 |
| chr1.3 | exon | 65181492 | 65181571 | 65181492 | ID=MS.gene60871.t1.exon3;Parent=MS.gene60871.t1 |
| chr1.3 | CDS | 65181492 | 65181571 | 65181492 | ID=cds.MS.gene60871.t1;Parent=MS.gene60871.t1 |
| chr1.3 | exon | 65180933 | 65181041 | 65180933 | ID=MS.gene60871.t1.exon4;Parent=MS.gene60871.t1 |
| chr1.3 | CDS | 65180933 | 65181041 | 65180933 | ID=cds.MS.gene60871.t1;Parent=MS.gene60871.t1 |
| chr1.3 | exon | 65180255 | 65180414 | 65180255 | ID=MS.gene60871.t1.exon5;Parent=MS.gene60871.t1 |
| chr1.3 | CDS | 65180255 | 65180414 | 65180255 | ID=cds.MS.gene60871.t1;Parent=MS.gene60871.t1 |
| chr1.3 | exon | 65179812 | 65179975 | 65179812 | ID=MS.gene60871.t1.exon6;Parent=MS.gene60871.t1 |
| chr1.3 | CDS | 65179812 | 65179975 | 65179812 | ID=cds.MS.gene60871.t1;Parent=MS.gene60871.t1 |
| chr1.3 | exon | 65179364 | 65179723 | 65179364 | ID=MS.gene60871.t1.exon7;Parent=MS.gene60871.t1 |
| chr1.3 | CDS | 65179364 | 65179723 | 65179364 | ID=cds.MS.gene60871.t1;Parent=MS.gene60871.t1 |
| Gene Sequence |
| Protein sequence |
