AlfalfaGEDB | MS.gene61228

M. sativa cultivar XinJiangDaYe / MS.gene61228

KEGG: -
GO: -
PFAM: PF13837.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61228.t1	XP_013465529.1	97.6	253	5	1	1	252	244	496	2.70E-131	478

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61228.t1	Q9LJG8	46.2	93	46	2	31	120	84	175	4.5e-18	93.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61228.t1	A0A072VC01	97.6	253	5	1	1	252	244	496	1.9e-131	478.0

TFs/TRs:

Gene ID	Type	Classification
MS.gene61228.t1	TF	Trihelix

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene61228	0.868929	4.53E-66	-1.69E-46
MS.gene049159	MS.gene61228	0.823777	1.15E-53	-1.69E-46
MS.gene04918	MS.gene61228	0.819552	1.09E-52	-1.69E-46
MS.gene049254	MS.gene61228	0.846993	1.53E-59	-1.69E-46
MS.gene049272	MS.gene61228	0.805557	1.26E-49	-1.69E-46
MS.gene049350	MS.gene61228	0.818241	2.17E-52	-1.69E-46
MS.gene049368	MS.gene61228	0.834003	3.85E-56	-1.69E-46
MS.gene049452	MS.gene61228	0.816226	6.17E-52	-1.69E-46
MS.gene049499	MS.gene61228	0.838318	3.09E-57	-1.69E-46
MS.gene049647	MS.gene61228	0.807531	4.83E-50	-1.69E-46
MS.gene049850	MS.gene61228	0.805667	1.19E-49	-1.69E-46
MS.gene049983	MS.gene61228	0.851699	7.48E-61	-1.69E-46
MS.gene050156	MS.gene61228	0.806595	7.62E-50	-1.69E-46
MS.gene050654	MS.gene61228	0.817629	2.99E-52	-1.69E-46
MS.gene050737	MS.gene61228	0.853938	1.72E-61	-1.69E-46
MS.gene050826	MS.gene61228	0.801164	1.02E-48	-1.69E-46
MS.gene050941	MS.gene61228	0.8658	4.54E-65	-1.69E-46
MS.gene051003	MS.gene61228	0.801418	9.09E-49	-1.69E-46
MS.gene051198	MS.gene61228	0.807374	5.22E-50	-1.69E-46
MS.gene051247	MS.gene61228	0.802238	6.17E-49	-1.69E-46
MS.gene051800	MS.gene61228	0.805308	1.42E-49	-1.69E-46
MS.gene052463	MS.gene61228	0.851535	8.33E-61	-1.69E-46
MS.gene052493	MS.gene61228	0.804544	2.05E-49	-1.69E-46
MS.gene052516	MS.gene61228	0.847401	1.18E-59	-1.69E-46
MS.gene052518	MS.gene61228	0.82956	4.81E-55	-1.69E-46
MS.gene052519	MS.gene61228	0.852621	4.09E-61	-1.69E-46
MS.gene052534	MS.gene61228	0.80565	1.21E-49	-1.69E-46
MS.gene052773	MS.gene61228	0.830782	2.42E-55	-1.69E-46
MS.gene052863	MS.gene61228	0.834211	3.42E-56	-1.69E-46
MS.gene052896	MS.gene61228	0.801428	9.05E-49	-1.69E-46
MS.gene053008	MS.gene61228	0.816044	6.77E-52	-1.69E-46
MS.gene053226	MS.gene61228	0.816051	6.75E-52	-1.69E-46
MS.gene05350	MS.gene61228	0.815971	7.03E-52	-1.69E-46
MS.gene054236	MS.gene61228	0.824587	7.44E-54	-1.69E-46
MS.gene05423	MS.gene61228	0.811622	6.38E-51	-1.69E-46
MS.gene054479	MS.gene61228	0.823165	1.60E-53	-1.69E-46
MS.gene05458	MS.gene61228	0.846222	2.49E-59	-1.69E-46
MS.gene054651	MS.gene61228	0.835297	1.82E-56	-1.69E-46
MS.gene054775	MS.gene61228	0.822273	2.59E-53	-1.69E-46
MS.gene054991	MS.gene61228	0.826215	3.07E-54	-1.69E-46
MS.gene05517	MS.gene61228	0.800057	1.72E-48	-1.69E-46
MS.gene055228	MS.gene61228	0.804249	2.37E-49	-1.69E-46
MS.gene055465	MS.gene61228	0.806071	9.83E-50	-1.69E-46
MS.gene055466	MS.gene61228	0.82879	7.39E-55	-1.69E-46
MS.gene055468	MS.gene61228	0.835033	2.12E-56	-1.69E-46
MS.gene055513	MS.gene61228	0.832273	1.04E-55	-1.69E-46
MS.gene055818	MS.gene61228	0.833001	6.85E-56	-1.69E-46
MS.gene055864	MS.gene61228	0.826711	2.34E-54	-1.69E-46
MS.gene055926	MS.gene61228	0.816322	5.87E-52	-1.69E-46
MS.gene056162	MS.gene61228	0.810456	1.14E-50	-1.69E-46
MS.gene056174	MS.gene61228	0.815165	1.06E-51	-1.69E-46
MS.gene056308	MS.gene61228	0.815886	7.35E-52	-1.69E-46
MS.gene056595	MS.gene61228	0.851661	7.67E-61	-1.69E-46
MS.gene056699	MS.gene61228	0.835469	1.65E-56	-1.69E-46
MS.gene056776	MS.gene61228	0.815892	7.32E-52	-1.69E-46
MS.gene05686	MS.gene61228	0.801124	1.04E-48	-1.69E-46
MS.gene05690	MS.gene61228	0.839754	1.31E-57	-1.69E-46
MS.gene057026	MS.gene61228	0.803942	2.74E-49	-1.69E-46
MS.gene057034	MS.gene61228	0.804564	2.03E-49	-1.69E-46
MS.gene057102	MS.gene61228	0.824867	6.40E-54	-1.69E-46
MS.gene057208	MS.gene61228	0.839275	1.75E-57	-1.69E-46
MS.gene058008	MS.gene61228	0.814535	1.47E-51	-1.69E-46
MS.gene058009	MS.gene61228	0.823791	1.14E-53	-1.69E-46
MS.gene058081	MS.gene61228	0.827817	1.27E-54	-1.69E-46
MS.gene058159	MS.gene61228	0.806211	9.18E-50	-1.69E-46
MS.gene058427	MS.gene61228	0.8111	8.29E-51	-1.69E-46
MS.gene058625	MS.gene61228	0.813285	2.77E-51	-1.69E-46
MS.gene058781	MS.gene61228	0.821893	3.17E-53	-1.69E-46
MS.gene058783	MS.gene61228	0.841798	3.82E-58	-1.69E-46
MS.gene058979	MS.gene61228	0.814213	1.73E-51	-1.69E-46
MS.gene05897	MS.gene61228	0.820777	5.73E-53	-1.69E-46
MS.gene059170	MS.gene61228	0.819937	8.93E-53	-1.69E-46
MS.gene059283	MS.gene61228	0.852738	3.79E-61	-1.69E-46
MS.gene059439	MS.gene61228	0.81411	1.82E-51	-1.69E-46
MS.gene059570	MS.gene61228	0.82926	5.69E-55	-1.69E-46
MS.gene059842	MS.gene61228	0.829394	5.28E-55	-1.69E-46
MS.gene059952	MS.gene61228	0.811652	6.29E-51	-1.69E-46
MS.gene060322	MS.gene61228	0.837496	5.02E-57	-1.69E-46
MS.gene060435	MS.gene61228	0.828469	8.84E-55	-1.69E-46
MS.gene06052	MS.gene61228	0.867044	1.83E-65	-1.69E-46
MS.gene060932	MS.gene61228	0.847415	1.17E-59	-1.69E-46
MS.gene060935	MS.gene61228	0.831091	2.03E-55	-1.69E-46
MS.gene060937	MS.gene61228	0.828378	9.29E-55	-1.69E-46
MS.gene061100	MS.gene61228	0.823071	1.69E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61228.t1	MTR_2g102227	97.628	253	5	1	1	252	244	496	0.0	509
MS.gene61228.t1	MTR_6g486270	52.252	222	101	3	30	248	129	348	1.54e-62	200
MS.gene61228.t1	MTR_8g022290	28.758	306	141	10	10	247	37	333	3.44e-21	91.7
MS.gene61228.t1	MTR_4g079960	43.617	94	47	2	31	118	31	124	5.18e-18	82.0
MS.gene61228.t1	MTR_4g079960	40.541	74	44	0	176	249	220	293	4.26e-11	62.4
MS.gene61228.t1	MTR_4g079960	43.158	95	48	2	31	119	31	125	5.96e-18	81.6
MS.gene61228.t1	MTR_4g079960	40.541	74	44	0	176	249	220	293	5.30e-11	62.0
MS.gene61228.t1	MTR_4g079960	43.158	95	48	2	31	119	31	125	7.80e-18	81.6
MS.gene61228.t1	MTR_4g079960	40.541	74	44	0	176	249	220	293	5.16e-11	62.0
MS.gene61228.t1	MTR_2g016140	39.785	93	51	2	31	118	23	115	2.70e-17	80.1
MS.gene61228.t1	MTR_2g016140	39.785	93	51	2	31	118	23	115	3.05e-17	80.1
MS.gene61228.t1	MTR_2g092960	31.250	112	65	2	11	118	34	137	5.95e-12	65.9
MS.gene61228.t1	MTR_1g037650	25.850	147	100	3	30	172	37	178	1.58e-11	62.0
MS.gene61228.t1	MTR_7g081190	31.579	95	57	2	31	117	46	140	8.08e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61228.t1	AT3G24490	43.083	253	124	4	1	252	73	306	1.86e-60	194
MS.gene61228.t1	AT3G14180	42.453	106	54	3	31	133	84	185	1.64e-23	98.6
MS.gene61228.t1	AT3G11100	33.182	220	137	3	31	246	22	235	5.97e-21	89.0
MS.gene61228.t1	AT1G54060	31.439	264	137	8	31	252	94	355	5.94e-19	85.5
MS.gene61228.t1	AT5G05550	28.814	236	129	5	31	250	24	236	1.21e-17	80.1
MS.gene61228.t1	AT5G05550	28.814	236	129	5	31	250	24	236	1.60e-17	79.7
MS.gene61228.t1	AT5G05550	28.814	236	129	5	31	250	24	236	1.94e-17	79.3
MS.gene61228.t1	AT3G58630	37.255	102	50	2	31	118	26	127	1.75e-16	77.8
MS.gene61228.t1	AT3G58630	37.255	102	50	2	31	118	26	127	1.96e-16	77.8
MS.gene61228.t1	AT3G10030	34.783	92	59	1	30	120	160	251	2.32e-14	72.4
MS.gene61228.t1	AT3G10030	34.783	92	59	1	30	120	160	251	2.58e-14	72.4
MS.gene61228.t1	AT3G24860	30.400	125	77	3	16	134	50	170	4.57e-13	68.2

Find 51 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCTGATTCCATTCAGAATTT+TGG	0.118439	2.1:-3318646	MS.gene61228:CDS
CAAGATTAAGTTTCAAGATA+TGG	0.238032	2.1:-3318944	MS.gene61228:CDS
GCAGCTGCTAAACGATCTTT+TGG	0.284124	2.1:-3319180	MS.gene61228:CDS
TGGGTGGTGGAGATAGAAAA+TGG	0.290828	2.1:-3318924	MS.gene61228:CDS
CATTTGTTCTTCTTGATGCT+TGG	0.296454	2.1:-3319119	MS.gene61228:CDS
ATTTGTTCTTCTTGATGCTT+GGG	0.319429	2.1:-3319118	MS.gene61228:CDS
AGAAGATTGAAAATAATAAA+AGG	0.319723	2.1:-3318612	MS.gene61228:CDS
ACAGAATCGGTTCGTGTAGA+AGG	0.331232	2.1:-3318742	MS.gene61228:CDS
GATGGATTTCCTCAACGATT+TGG	0.369450	2.1:-3318560	MS.gene61228:CDS
TTCTTGATGCTTGGGGTGAT+CGG	0.409344	2.1:-3319110	MS.gene61228:CDS
ATCGGTTTCTGCAACATAGA+AGG	0.423435	2.1:-3319092	MS.gene61228:CDS
AAGATTAAGTTTCAAGATAT+GGG	0.423794	2.1:-3318943	MS.gene61228:CDS
AACTTATGAATTTGCAGCTC+GGG	0.427130	2.1:-3319220	MS.gene61228:CDS
ATGGCAACAAGTTGCAGAAA+AGG	0.453580	2.1:-3319049	MS.gene61228:CDS
TAATAAAAGGCAGCAGATGA+TGG	0.461717	2.1:-3318599	MS.gene61228:CDS
GTTTCAAAAGTTGAAAGAAC+GGG	0.463936	2.1:-3319018	MS.gene61228:CDS
GGGTGGTGGAGATAGAAAAT+GGG	0.465027	2.1:-3318923	MS.gene61228:CDS
CCTTCTCAGTCCATTCAGTA+AGG	0.479775	2.1:+3319145	None:intergenic
GCAGCTGCAGCTGACGGTGT+TGG	0.482446	2.1:+3319195	None:intergenic
TTAGGAATTCCCTTACTGAA+TGG	0.483595	2.1:-3319155	MS.gene61228:CDS
GGAATCAGCAAGTAATTTGA+AGG	0.488399	2.1:+3318660	None:intergenic
TATCTTACCAAAATTCTGAA+TGG	0.497261	2.1:+3318639	None:intergenic
TCCTCCTGAAAATACAGAAT+CGG	0.498451	2.1:-3318755	MS.gene61228:CDS
GCATGATTTACATAAACTCC+AGG	0.504047	2.1:+3318805	None:intergenic
CAAAGAAAAGAAGGAAAGGA+AGG	0.514012	2.1:-3318702	MS.gene61228:CDS
GGCCTTGCCCAAAGAAAAGA+AGG	0.520654	2.1:-3318711	MS.gene61228:CDS
AAGTTTCAAGATATGGGTGG+TGG	0.524195	2.1:-3318937	MS.gene61228:CDS
TCTCTTGAGTTCGAACGACA+AGG	0.531751	2.1:+3318844	None:intergenic
GGAACTAGAAAAGATGAGGA+TGG	0.544427	2.1:-3318578	MS.gene61228:CDS
GGGAGTCTTGCTTGTTGTGG+TGG	0.550724	2.1:+3318865	None:intergenic
AAAGAAAAGAAGGAAAGGAA+GGG	0.551393	2.1:-3318701	MS.gene61228:CDS
TTTGTTCTTCTTGATGCTTG+GGG	0.554775	2.1:-3319117	MS.gene61228:CDS
AAGAAAAGAAGGAAAGGAAG+GGG	0.556042	2.1:-3318700	MS.gene61228:CDS
GTTCGTGTAGAAGGTTTCGA+AGG	0.557020	2.1:-3318733	MS.gene61228:CDS
CGTTTAGCAGCTGCAGCTGA+CGG	0.562335	2.1:+3319189	None:intergenic
CTCTTGAGTTCGAACGACAA+GGG	0.566224	2.1:+3318845	None:intergenic
GGTTTCAAAAGTTGAAAGAA+CGG	0.571460	2.1:-3319019	MS.gene61228:CDS
TGTAAATCATGCAAATGAGA+TGG	0.574988	2.1:-3318794	MS.gene61228:CDS
AAGGAAGAGTCTTCGATCTG+AGG	0.584495	2.1:-3319073	MS.gene61228:CDS
TGCCCAAAGAAAAGAAGGAA+AGG	0.586775	2.1:-3318706	MS.gene61228:CDS
CAACTTATGAATTTGCAGCT+CGG	0.587886	2.1:-3319221	MS.gene61228:CDS
CAAGGGAGTCTTGCTTGTTG+TGG	0.589582	2.1:+3318862	None:intergenic
CTTCTCAGTCCATTCAGTAA+GGG	0.589672	2.1:+3319146	None:intergenic
AGAGTCTTCGATCTGAGGAA+TGG	0.593143	2.1:-3319068	MS.gene61228:CDS
AGTTGCAGAAAAGGTATCAG+TGG	0.596635	2.1:-3319040	MS.gene61228:CDS
TTCGTGTAGAAGGTTTCGAA+GGG	0.597829	2.1:-3318732	MS.gene61228:CDS
CCTTACTGAATGGACTGAGA+AGG	0.603468	2.1:-3319145	MS.gene61228:CDS
TGATGGAACTAGAAAAGATG+AGG	0.616160	2.1:-3318582	MS.gene61228:CDS
AAATGAGATGGATGACATGA+AGG	0.616691	2.1:-3318782	MS.gene61228:CDS
ATTAAGTTTCAAGATATGGG+TGG	0.645987	2.1:-3318940	MS.gene61228:CDS
TTTGTGCTTCCAAATCGTTG+AGG	0.661381	2.1:+3318551	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGAAGATTGAAAATAATAAA+AGG	-	chr2.1:3319102-3319121	MS.gene61228:CDS	15.0%
!!	ATTGAAGAAAAAATACAAAA+AGG	-	chr2.1:3318746-3318765	MS.gene61228:CDS	15.0%
!!	AAGATTAAGTTTCAAGATAT+GGG	-	chr2.1:3318771-3318790	MS.gene61228:CDS	20.0%
!	CAAGATTAAGTTTCAAGATA+TGG	-	chr2.1:3318770-3318789	MS.gene61228:CDS	25.0%
!	TATCTTACCAAAATTCTGAA+TGG	+	chr2.1:3319078-3319097	None:intergenic	25.0%
!!!	ATGGGTTTATTTTCAAAAGA+TGG	-	chr2.1:3318809-3318828	MS.gene61228:CDS	25.0%
	AAAGAAAAGAAGGAAAGGAA+GGG	-	chr2.1:3319013-3319032	MS.gene61228:CDS	30.0%
	ATTAAGTTTCAAGATATGGG+TGG	-	chr2.1:3318774-3318793	MS.gene61228:CDS	30.0%
	ATTTGTTCTTCTTGATGCTT+GGG	-	chr2.1:3318596-3318615	MS.gene61228:CDS	30.0%
	GGTTTCAAAAGTTGAAAGAA+CGG	-	chr2.1:3318695-3318714	MS.gene61228:CDS	30.0%
	GTTTCAAAAGTTGAAAGAAC+GGG	-	chr2.1:3318696-3318715	MS.gene61228:CDS	30.0%
	TGTAAATCATGCAAATGAGA+TGG	-	chr2.1:3318920-3318939	MS.gene61228:CDS	30.0%
!	TTCCTTTCCTTCTTTTCTTT+GGG	+	chr2.1:3319013-3319032	None:intergenic	30.0%
	AAATGAGATGGATGACATGA+AGG	-	chr2.1:3318932-3318951	MS.gene61228:CDS	35.0%
	AACTTATGAATTTGCAGCTC+GGG	-	chr2.1:3318494-3318513	MS.gene61228:CDS	35.0%
	AAGAAAAGAAGGAAAGGAAG+GGG	-	chr2.1:3319014-3319033	MS.gene61228:CDS	35.0%
	CAAAGAAAAGAAGGAAAGGA+AGG	-	chr2.1:3319012-3319031	MS.gene61228:CDS	35.0%
	CAACTTATGAATTTGCAGCT+CGG	-	chr2.1:3318493-3318512	MS.gene61228:CDS	35.0%
	CATTTGTTCTTCTTGATGCT+TGG	-	chr2.1:3318595-3318614	MS.gene61228:CDS	35.0%
	GCATGATTTACATAAACTCC+AGG	+	chr2.1:3318912-3318931	None:intergenic	35.0%
	GGAATCAGCAAGTAATTTGA+AGG	+	chr2.1:3319057-3319076	None:intergenic	35.0%
	TAATAAAAGGCAGCAGATGA+TGG	-	chr2.1:3319115-3319134	MS.gene61228:CDS	35.0%
	TCCTCCTGAAAATACAGAAT+CGG	-	chr2.1:3318959-3318978	MS.gene61228:CDS	35.0%
	TGATGGAACTAGAAAAGATG+AGG	-	chr2.1:3319132-3319151	MS.gene61228:CDS	35.0%
	TTAGGAATTCCCTTACTGAA+TGG	-	chr2.1:3318559-3318578	MS.gene61228:CDS	35.0%
	TTTGTTCTTCTTGATGCTTG+GGG	-	chr2.1:3318597-3318616	MS.gene61228:CDS	35.0%
!	CTTCCTTTCCTTCTTTTCTT+TGG	+	chr2.1:3319014-3319033	None:intergenic	35.0%
!!	GCTGATTCCATTCAGAATTT+TGG	-	chr2.1:3319068-3319087	MS.gene61228:CDS	35.0%
	AAGTTTCAAGATATGGGTGG+TGG	-	chr2.1:3318777-3318796	MS.gene61228:CDS	40.0%
	ATGGCAACAAGTTGCAGAAA+AGG	-	chr2.1:3318665-3318684	MS.gene61228:CDS	40.0%
	CTTCTCAGTCCATTCAGTAA+GGG	+	chr2.1:3318571-3318590	None:intergenic	40.0%
	GGAACTAGAAAAGATGAGGA+TGG	-	chr2.1:3319136-3319155	MS.gene61228:CDS	40.0%
	TGCCCAAAGAAAAGAAGGAA+AGG	-	chr2.1:3319008-3319027	MS.gene61228:CDS	40.0%
	TTCGTGTAGAAGGTTTCGAA+GGG	-	chr2.1:3318982-3319001	MS.gene61228:CDS	40.0%
	TTTGTGCTTCCAAATCGTTG+AGG	+	chr2.1:3319166-3319185	None:intergenic	40.0%
!	AGCTGCTAAACGATCTTTTG+GGG	-	chr2.1:3318536-3318555	MS.gene61228:CDS	40.0%
!	ATCGGTTTCTGCAACATAGA+AGG	-	chr2.1:3318622-3318641	MS.gene61228:CDS	40.0%
!	CAGCTGCTAAACGATCTTTT+GGG	-	chr2.1:3318535-3318554	MS.gene61228:CDS	40.0%
!	GATGGATTTCCTCAACGATT+TGG	-	chr2.1:3319154-3319173	MS.gene61228:CDS	40.0%
!	TTCCTTCTTTTCTTTGGGCA+AGG	+	chr2.1:3319008-3319027	None:intergenic	40.0%
!!	ACCGATTCTGTATTTTCAGG+AGG	+	chr2.1:3318963-3318982	None:intergenic	40.0%
!!	AGTTGCAGAAAAGGTATCAG+TGG	-	chr2.1:3318674-3318693	MS.gene61228:CDS	40.0%
!!	CGAACCGATTCTGTATTTTC+AGG	+	chr2.1:3318966-3318985	None:intergenic	40.0%
!!	GAGCGTATTTTTATGAAGCC+TGG	-	chr2.1:3318891-3318910	MS.gene61228:CDS	40.0%
!!!	CTAAACGATCTTTTGGGGTT+AGG	-	chr2.1:3318541-3318560	MS.gene61228:CDS	40.0%
	AAGGAAGAGTCTTCGATCTG+AGG	-	chr2.1:3318641-3318660	MS.gene61228:CDS	45.0%
	AGAGTCTTCGATCTGAGGAA+TGG	-	chr2.1:3318646-3318665	MS.gene61228:CDS	45.0%
	CCTTCTCAGTCCATTCAGTA+AGG	+	chr2.1:3318572-3318591	None:intergenic	45.0%
	CTCTTGAGTTCGAACGACAA+GGG	+	chr2.1:3318872-3318891	None:intergenic	45.0%
	GTTCGTGTAGAAGGTTTCGA+AGG	-	chr2.1:3318981-3319000	MS.gene61228:CDS	45.0%
	TCTCTTGAGTTCGAACGACA+AGG	+	chr2.1:3318873-3318892	None:intergenic	45.0%
	TTCTTGATGCTTGGGGTGAT+CGG	-	chr2.1:3318604-3318623	MS.gene61228:CDS	45.0%
!	GCAGCTGCTAAACGATCTTT+TGG	-	chr2.1:3318534-3318553	MS.gene61228:CDS	45.0%
!!	ACAGAATCGGTTCGTGTAGA+AGG	-	chr2.1:3318972-3318991	MS.gene61228:CDS	45.0%
!!	CCTTACTGAATGGACTGAGA+AGG	-	chr2.1:3318569-3318588	MS.gene61228:CDS	45.0%
!!	GGGTGGTGGAGATAGAAAAT+GGG	-	chr2.1:3318791-3318810	MS.gene61228:CDS	45.0%
!!	TGGGTGGTGGAGATAGAAAA+TGG	-	chr2.1:3318790-3318809	MS.gene61228:CDS	45.0%
	GGCCTTGCCCAAAGAAAAGA+AGG	-	chr2.1:3319003-3319022	MS.gene61228:CDS	50.0%
!	CAAGGGAGTCTTGCTTGTTG+TGG	+	chr2.1:3318855-3318874	None:intergenic	50.0%
	CGTTTAGCAGCTGCAGCTGA+CGG	+	chr2.1:3318528-3318547	None:intergenic	55.0%
!!	GGGAGTCTTGCTTGTTGTGG+TGG	+	chr2.1:3318852-3318871	None:intergenic	55.0%
	GCAGCTGCAGCTGACGGTGT+TGG	+	chr2.1:3318522-3318541	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	3318489	3319247	3318489	ID=MS.gene61228
chr2.1	mRNA	3318489	3319247	3318489	ID=MS.gene61228.t1;Parent=MS.gene61228
chr2.1	exon	3318489	3319247	3318489	ID=MS.gene61228.t1.exon1;Parent=MS.gene61228.t1
chr2.1	CDS	3318489	3319247	3318489	ID=cds.MS.gene61228.t1;Parent=MS.gene61228.t1

Gene Sequence

>MS.gene61228

ATGTCAACTTATGAATTTGCAGCTCGGGTGCCAACACCGTCAGCTGCAGCTGCTAAACGATCTTTTGGGGTTAGGAATTCCCTTACTGAATGGACTGAGAAGGAGACATTTGTTCTTCTTGATGCTTGGGGTGATCGGTTTCTGCAACATAGAAGGAAGAGTCTTCGATCTGAGGAATGGCAACAAGTTGCAGAAAAGGTATCAGTGGTTTCAAAAGTTGAAAGAACGGGTACTCAGTGTAGAAATCGTTTAGATACATTGAAGAAAAAATACAAAAAGGACAAGATTAAGTTTCAAGATATGGGTGGTGGAGATAGAAAATGGGTTTATTTTCAAAAGATGGATAAACTAATGTCTTCTCCACCACAACAAGCAAGACTCCCTTGTCGTTCGAACTCAAGAGAGCGTATTTTTATGAAGCCTGGAGTTTATGTAAATCATGCAAATGAGATGGATGACATGAAGGATAGTCCTCCTGAAAATACAGAATCGGTTCGTGTAGAAGGTTTCGAAGGGCCTTGCCCAAAGAAAAGAAGGAAAGGAAGGGGAAGTGATGAGTTTTCTTCCTTCAAATTACTTGCTGATTCCATTCAGAATTTTGGTAAGATATATGAGAAGATTGAAAATAATAAAAGGCAGCAGATGATGGAACTAGAAAAGATGAGGATGGATTTCCTCAACGATTTGGAAGCACAAAAGAGACAGATTTTTGAAAGATTGCAGAGTGAGATTTTAAAAATCGAGCAAAGAGATGATTAA

Protein sequence

>MS.gene61228.t1

MSTYEFAARVPTPSAAAAKRSFGVRNSLTEWTEKETFVLLDAWGDRFLQHRRKSLRSEEWQQVAEKVSVVSKVERTGTQCRNRLDTLKKKYKKDKIKFQDMGGGDRKWVYFQKMDKLMSSPPQQARLPCRSNSRERIFMKPGVYVNHANEMDDMKDSPPENTESVRVEGFEGPCPKKRRKGRGSDEFSSFKLLADSIQNFGKIYEKIENNKRQQMMELEKMRMDFLNDLEAQKRQIFERLQSEILKIEQRDD