AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69821


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69821.t1 MTR_2g083200 97.973 296 5 1 1 295 1 296 0.0 582
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69821.t1 AT4G27120 64.262 305 92 5 1 295 1 298 5.58e-97 288
MS.gene69821.t1 AT4G27120 64.262 305 92 5 1 295 1 298 5.58e-97 288
MS.gene69821.t1 AT4G27120 75.000 228 47 4 76 295 4 229 5.90e-86 257

Find 67 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTATATATTCAACAAAAT+TGG 0.202421 2.4:+16133269 None:intergenic
GGTTTGATTTACTAGCTAAA+TGG 0.210956 2.4:+16130639 None:intergenic
TTCTGCAGCAAGATCTTCTA+AGG 0.265042 2.4:+16133045 None:intergenic
AATAAACCTTGTTGCGTTGC+AGG 0.302830 2.4:+16135941 None:intergenic
TCCTCAGCATAATGAGTCTT+TGG 0.336486 2.4:+16130599 None:intergenic
GGCCAAAGCATCAAAGAAAA+AGG 0.344496 2.4:-16135086 MS.gene69821:CDS
TTCCTCCGAAGAATCTCTTC+AGG 0.362853 2.4:-16136144 MS.gene69821:intron
CTTTGACTGCCGAGCTTCTT+CGG 0.373097 2.4:+16133577 None:intergenic
GGATGAAGAGCGTGAGGCGC+AGG 0.375726 2.4:-16133522 MS.gene69821:CDS
TTTCGGGTGTCATGGATGAT+AGG 0.388749 2.4:-16130742 MS.gene69821:CDS
GTTTGATTTACTAGCTAAAT+GGG 0.400098 2.4:+16130640 None:intergenic
TATCAATCGCATCACATCTC+TGG 0.405277 2.4:-16131214 MS.gene69821:CDS
TTGGCTCTAAATCAATGAAC+TGG 0.430161 2.4:+16130618 None:intergenic
AGAGGAAGCCAAAGCTCAAA+AGG 0.449793 2.4:-16133403 MS.gene69821:CDS
CGTCGGAGAACGGTTGCGTC+TGG 0.451265 2.4:-16135986 MS.gene69821:CDS
CACTAATTCCACTCTACCTA+TGG 0.452049 2.4:-16136202 MS.gene69821:CDS
GTAGCGGTGGCACGTGCAGC+AGG 0.458752 2.4:+16136019 None:intergenic
AGGAACTCAAAAGGCAAGAG+AGG 0.466995 2.4:-16135066 MS.gene69821:CDS
GCAAACCTGAAGAGATTCTT+CGG 0.475006 2.4:+16136139 None:intergenic
TTCAGAAATGCGGAGGTTGA+AGG 0.477745 2.4:-16133543 MS.gene69821:CDS
CCGCTACTCGCCGCATGCGT+CGG 0.483491 2.4:-16136003 MS.gene69821:CDS
TCGCCGCATGCGTCGGAGAA+CGG 0.485918 2.4:-16135996 MS.gene69821:CDS
CGTGCAGCAGGTTCTCTGAC+TGG 0.487359 2.4:+16136031 None:intergenic
AGGTCGGCTTTCGGGTGTCA+TGG 0.491989 2.4:-16130750 MS.gene69821:CDS
AGCTCAAAAGGCTAGGGAAG+AGG 0.494792 2.4:-16133391 MS.gene69821:CDS
ACCTCCGCATTTCTGAATAA+CGG 0.508197 2.4:+16133549 None:intergenic
TTCGGGTGTCATGGATGATA+GGG 0.512596 2.4:-16130741 MS.gene69821:CDS
CATCACATCTCTGGAAAGCA+TGG 0.517076 2.4:-16131205 MS.gene69821:CDS
AATCGCGATGGCGTTTCCAT+AGG 0.517904 2.4:+16136186 None:intergenic
AAGCCAAAGCTCAAAAGGCT+AGG 0.524157 2.4:-16133398 MS.gene69821:CDS
AAAATTCATTTACATCTCAC+AGG 0.525131 2.4:-16130717 MS.gene69821:CDS
AGGTACACTTGAAGAGGAGC+AGG 0.538791 2.4:-16133313 MS.gene69821:CDS
TGAGGCGCAGGAGCGTAAGT+TGG 0.547553 2.4:-16133510 MS.gene69821:intron
TTTGAAAGGCCGAAGAAGCT+CGG 0.559088 2.4:-16133586 MS.gene69821:intron
AGCCAAAGCTCAAAAGGCTA+GGG 0.560451 2.4:-16133397 MS.gene69821:CDS
CCGACGCATGCGGCGAGTAG+CGG 0.568591 2.4:+16136003 None:intergenic
GCTCCGCCTGCAACGCAACA+AGG 0.578148 2.4:-16135947 MS.gene69821:intron
TTCGGAGGAAGATGAAGATG+AGG 0.579662 2.4:+16136157 None:intergenic
TTATATTAAGCGACAAGGGA+GGG 0.582545 2.4:-16130672 MS.gene69821:CDS
ACGCATGCGGCGAGTAGCGG+TGG 0.584210 2.4:+16136006 None:intergenic
AGAGAGGGAAGCTCGACGGC+AGG 0.585418 2.4:-16135050 MS.gene69821:intron
GGCAAGAGAGGGAAGCTCGA+CGG 0.594227 2.4:-16135054 MS.gene69821:CDS
TGATGAAGGTACACTTGAAG+AGG 0.595506 2.4:-16133319 MS.gene69821:CDS
GGAACTCAAAAGGCAAGAGA+GGG 0.598128 2.4:-16135065 MS.gene69821:CDS
TGCTGAGGACATTAGTAACA+TGG 0.604243 2.4:-16130585 MS.gene69821:CDS
CAACCGTTCTCCGACGCATG+CGG 0.605145 2.4:+16135993 None:intergenic
TGGCGTTTCCATAGGTAGAG+TGG 0.606502 2.4:+16136194 None:intergenic
ACCGTTATTCAGAAATGCGG+AGG 0.609223 2.4:-16133550 MS.gene69821:CDS
AGAATTTAAATTGCGCACAC+AGG 0.611949 2.4:-16133026 MS.gene69821:intron
TTAGAGTTTGACAAGTGGAA+AGG 0.613934 2.4:-16133357 MS.gene69821:CDS
ATTATATTAAGCGACAAGGG+AGG 0.616619 2.4:-16130673 MS.gene69821:CDS
GAAAGTGACAATGAAGCTGC+TGG 0.617304 2.4:-16135121 MS.gene69821:CDS
ATCACATCTCTGGAAAGCAT+GGG 0.618886 2.4:-16131204 MS.gene69821:intron
TCTGCAGCAAGATCTTCTAA+GGG 0.619289 2.4:+16133046 None:intergenic
AAACCTTGTTGCGTTGCAGG+CGG 0.623759 2.4:+16135944 None:intergenic
CTGCGTTAGAGTTTGACAAG+TGG 0.625306 2.4:-16133362 MS.gene69821:CDS
CTGATTATATTAAGCGACAA+GGG 0.630907 2.4:-16130676 MS.gene69821:CDS
CTGCAATGAGAAGTGTAGAG+AGG 0.643472 2.4:+16136225 None:intergenic
TCGGGTGTCATGGATGATAG+GGG 0.647827 2.4:-16130740 MS.gene69821:CDS
GTTGAAGGATGAAGAGCGTG+AGG 0.648299 2.4:-16133528 MS.gene69821:CDS
ATGAGGATTGAGAATCGCGA+TGG 0.648606 2.4:+16136174 None:intergenic
GCTGATTATATTAAGCGACA+AGG 0.652115 2.4:-16130677 MS.gene69821:CDS
GCCAAAGACTCATTATGCTG+AGG 0.657399 2.4:-16130600 MS.gene69821:CDS
AGCTGCTGGTGATGAGCATG+AGG 0.671214 2.4:-16135107 MS.gene69821:CDS
AAGACCGTTATTCAGAAATG+CGG 0.686615 2.4:-16133553 MS.gene69821:CDS
AACCTGAAGAGATTCTTCGG+AGG 0.717248 2.4:+16136142 None:intergenic
TGAGGACATTAGTAACATGG+AGG 0.752094 2.4:-16130582 MS.gene69821:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATATTCTATAAACTTA+AGG + chr2.4:16135063-16135082 None:intergenic 10.0%
!! TTATAGAATATTTATATACA+AGG - chr2.4:16135068-16135087 MS.gene69821:CDS 10.0%
!!! AAATAATATTTTAGATAAAG+GGG - chr2.4:16132284-16132303 MS.gene69821:intron 10.0%
!!! AGTAATATATTTTTCATTTT+CGG - chr2.4:16135538-16135557 MS.gene69821:intron 10.0%
!!! GAAATAATATTTTAGATAAA+GGG - chr2.4:16132283-16132302 MS.gene69821:intron 10.0%
!! AAGAAATATTTGACATAATT+GGG - chr2.4:16135822-16135841 MS.gene69821:intron 15.0%
!! AATAGAATATAAAAAAGAAG+AGG + chr2.4:16133867-16133886 None:intergenic 15.0%
!! ATATAAATCATTAAACATAC+TGG + chr2.4:16133976-16133995 None:intergenic 15.0%
!! CTTTATATATTCAACAAAAT+TGG + chr2.4:16133547-16133566 None:intergenic 15.0%
!! TAATTGAATTAATTCTTGTT+TGG - chr2.4:16130979-16130998 MS.gene69821:intron 15.0%
!!! AATAATATTTTAGATAAAGG+GGG - chr2.4:16132285-16132304 MS.gene69821:intron 15.0%
!!! AATGATTTATTTATTTTGTC+AGG - chr2.4:16136043-16136062 MS.gene69821:intron 15.0%
!!! AGACTTTTTTGAAAAATAAA+AGG - chr2.4:16132261-16132280 MS.gene69821:intron 15.0%
!!! CAATTTTGTTGAATATATAA+AGG - chr2.4:16133545-16133564 MS.gene69821:CDS 15.0%
!!! GATTTAATTTTATTTGTGTT+TGG - chr2.4:16130915-16130934 MS.gene69821:intron 15.0%
!!! GGAAATAATATTTTAGATAA+AGG - chr2.4:16132282-16132301 MS.gene69821:intron 15.0%
!!! GTAATATATTTTTCATTTTC+GGG - chr2.4:16135539-16135558 MS.gene69821:intron 15.0%
!!! TAATATATTTTTCATTTTCG+GGG - chr2.4:16135540-16135559 MS.gene69821:intron 15.0%
!!! TATATATTTCTTTTGATAGA+TGG + chr2.4:16135669-16135688 None:intergenic 15.0%
!!! TTTTATCTTACATTTTGTAA+TGG - chr2.4:16134406-16134425 MS.gene69821:intron 15.0%
!! AAAAGAAGTTAGATATTAGT+GGG + chr2.4:16134279-16134298 None:intergenic 20.0%
!! AAAAGTTTATTTATGTCCAT+AGG - chr2.4:16133629-16133648 MS.gene69821:intron 20.0%
!! AAAGTTTATTTATGTCCATA+GGG - chr2.4:16133630-16133649 MS.gene69821:intron 20.0%
!! AACTTCCAATTAATAATGTT+TGG + chr2.4:16134303-16134322 None:intergenic 20.0%
!! ACTTCCAATTAATAATGTTT+GGG + chr2.4:16134302-16134321 None:intergenic 20.0%
!! AGAAACAATATCTTAAAGTT+TGG - chr2.4:16135096-16135115 MS.gene69821:CDS 20.0%
!! AGATAATACAAAGGATAATT+TGG - chr2.4:16132338-16132357 MS.gene69821:intron 20.0%
!! ATAAAATTCCATTAATCAGA+TGG + chr2.4:16131281-16131300 None:intergenic 20.0%
!! ATAATCAATTGTTTAATTCG+TGG - chr2.4:16134534-16134553 MS.gene69821:intron 20.0%
!! ATCAAATAACAAGTAAGAAA+AGG + chr2.4:16132879-16132898 None:intergenic 20.0%
!! CAAACAATATAAAAAAGAAG+AGG + chr2.4:16133900-16133919 None:intergenic 20.0%
!! CATCACTCATTATTAAAAAT+GGG - chr2.4:16132719-16132738 MS.gene69821:intron 20.0%
!! GAAACAATATCTTAAAGTTT+GGG - chr2.4:16135097-16135116 MS.gene69821:CDS 20.0%
!! GAAGAAATATTTGACATAAT+TGG - chr2.4:16135821-16135840 MS.gene69821:intron 20.0%
!! TAATCAATTGTTTAATTCGT+GGG - chr2.4:16134535-16134554 MS.gene69821:intron 20.0%
!! TAGATGGTAATTTAAAAGAA+AGG + chr2.4:16135653-16135672 None:intergenic 20.0%
!! TATGATGAAAAATAAACCAA+GGG + chr2.4:16135698-16135717 None:intergenic 20.0%
!! TCATCACTCATTATTAAAAA+TGG - chr2.4:16132718-16132737 MS.gene69821:intron 20.0%
!! TGATTGTATATGAATTCAAA+AGG + chr2.4:16135749-16135768 None:intergenic 20.0%
!! TTAAATTTGACTAACCAAAA+TGG - chr2.4:16131929-16131948 MS.gene69821:intron 20.0%
!! TTACTTAGAAACATTAGAAA+AGG + chr2.4:16135453-16135472 None:intergenic 20.0%
!!! AATAGTTTAATTTTGTTCTC+AGG - chr2.4:16132695-16132714 MS.gene69821:intron 20.0%
!!! ATAATATTTTAGATAAAGGG+GGG - chr2.4:16132286-16132305 MS.gene69821:intron 20.0%
!!! ATTTATTTATTTTGTCAGGT+CGG - chr2.4:16136047-16136066 MS.gene69821:intron 20.0%
!!! GTTGTTTTTATAAGTTATCA+TGG - chr2.4:16131111-16131130 MS.gene69821:intron 20.0%
!!! TCGACTACTTTATAATTTTA+TGG - chr2.4:16135181-16135200 MS.gene69821:intron 20.0%
!!! TTTCTAATGTTTCTAAGTAA+TGG - chr2.4:16135453-16135472 MS.gene69821:intron 20.0%
!!! TTTTCCCAAACATTATTAAT+TGG - chr2.4:16134295-16134314 MS.gene69821:intron 20.0%
! AAAACAAGTGAAAAGACAAT+GGG - chr2.4:16134070-16134089 MS.gene69821:intron 25.0%
! AAAATTCATTTACATCTCAC+AGG - chr2.4:16136096-16136115 MS.gene69821:intron 25.0%
! AAACATGACTAGTATTATAC+AGG - chr2.4:16134197-16134216 MS.gene69821:intron 25.0%
! AACATGACTAGTATTATACA+GGG - chr2.4:16134198-16134217 MS.gene69821:intron 25.0%
! AACTAACTAATCATTTAACC+AGG + chr2.4:16133105-16133124 None:intergenic 25.0%
! AAGAAACAATCTCTTAAGTT+TGG - chr2.4:16135034-16135053 MS.gene69821:intron 25.0%
! AAGATGTTATGTGTATATGA+AGG - chr2.4:16131969-16131988 MS.gene69821:intron 25.0%
! AAGGTTAATTGGTTAAAAGA+AGG + chr2.4:16132427-16132446 None:intergenic 25.0%
! ACTAACTAATCATTTAACCA+GGG + chr2.4:16133104-16133123 None:intergenic 25.0%
! ACTTGAACAAAATAGTGAAA+TGG + chr2.4:16131479-16131498 None:intergenic 25.0%
! AGAAACAATCTCTTAAGTTT+GGG - chr2.4:16135035-16135054 MS.gene69821:intron 25.0%
! ATAACAGAACAATAAACAAG+TGG - chr2.4:16132640-16132659 MS.gene69821:intron 25.0%
! ATAGTGAAATGGAAAAGAAA+AGG + chr2.4:16131468-16131487 None:intergenic 25.0%
! CTACTTACATATTTAGTTGT+AGG - chr2.4:16134026-16134045 MS.gene69821:intron 25.0%
! CTATGATGAAAAATAAACCA+AGG + chr2.4:16135699-16135718 None:intergenic 25.0%
! GAAAAGAAGTTAGATATTAG+TGG + chr2.4:16134280-16134299 None:intergenic 25.0%
! GTGTATATGAAGGTTTAATA+AGG - chr2.4:16131979-16131998 MS.gene69821:intron 25.0%
! GTTAAAATGTGGTGAAATTA+GGG + chr2.4:16130716-16130735 None:intergenic 25.0%
! TAAACAACACTATATTGTTG+CGG - chr2.4:16132751-16132770 MS.gene69821:intron 25.0%
! TAACAGAACAATAAACAAGT+GGG - chr2.4:16132641-16132660 MS.gene69821:intron 25.0%
! TATCATCTATGTTGAACATT+TGG + chr2.4:16134445-16134464 None:intergenic 25.0%
! TATTGCATAAAATAGAGTCA+TGG + chr2.4:16132777-16132796 None:intergenic 25.0%
! TGTTAAAATGTGGTGAAATT+AGG + chr2.4:16130717-16130736 None:intergenic 25.0%
! TTAATTGTGAATGAATCATC+AGG - chr2.4:16130757-16130776 MS.gene69821:intron 25.0%
!! AAACTTTTGACAACTTATCA+AGG + chr2.4:16133617-16133636 None:intergenic 25.0%
!! ACTATTTTGTTCAAGTGTTT+AGG - chr2.4:16131483-16131502 MS.gene69821:intron 25.0%
!! CTATTTTGTTCAAGTGTTTA+GGG - chr2.4:16131484-16131503 MS.gene69821:intron 25.0%
!! GTTTGATTTACTAGCTAAAT+GGG + chr2.4:16136176-16136195 None:intergenic 25.0%
!! TAATTGTCCAATACAGTTTT+GGG + chr2.4:16132141-16132160 None:intergenic 25.0%
!! TGTTTGTTAATATAAACCGA+AGG + chr2.4:16134182-16134201 None:intergenic 25.0%
!! TTAATTGTCCAATACAGTTT+TGG + chr2.4:16132142-16132161 None:intergenic 25.0%
!! TTTTGGTACTTCTTTTTGAA+AGG - chr2.4:16133213-16133232 MS.gene69821:intron 25.0%
!!! ACAGATTTTGATTTATGAGA+TGG + chr2.4:16132593-16132612 None:intergenic 25.0%
!!! ACTCTCGATTTTTAAAACAT+TGG + chr2.4:16134610-16134629 None:intergenic 25.0%
!!! ATCTTGTAGACAAGTTTTAT+CGG - chr2.4:16134475-16134494 MS.gene69821:intron 25.0%
!!! CAGATTTTGATTTATGAGAT+GGG + chr2.4:16132592-16132611 None:intergenic 25.0%
!!! CGAGTTTTATTGTTAAAATG+TGG + chr2.4:16130727-16130746 None:intergenic 25.0%
!!! CTCTCGATTTTTAAAACATT+GGG + chr2.4:16134609-16134628 None:intergenic 25.0%
!!! CTTACTTGTTATTTGATTTC+TGG - chr2.4:16132882-16132901 MS.gene69821:intron 25.0%
!!! TAAAACCTAGCTATTTTTGT+AGG + chr2.4:16135936-16135955 None:intergenic 25.0%
!!! TAATATTTTAGATAAAGGGG+GGG - chr2.4:16132287-16132306 MS.gene69821:intron 25.0%
AAAAAAGAAGAGGTGATAGA+GGG + chr2.4:16133857-16133876 None:intergenic 30.0%
AAAAGACAATGGGAAAACAA+AGG - chr2.4:16134080-16134099 MS.gene69821:intron 30.0%
AAAATTGAACTGCTGTAGTT+TGG - chr2.4:16131425-16131444 MS.gene69821:intron 30.0%
AAAGACAATGGGAAAACAAA+GGG - chr2.4:16134081-16134100 MS.gene69821:intron 30.0%
AAATTCCATTAATCAGATGG+TGG + chr2.4:16131278-16131297 None:intergenic 30.0%
AAATTGAACTGCTGTAGTTT+GGG - chr2.4:16131426-16131445 MS.gene69821:intron 30.0%
AACCTAATGGAAATTAGCTA+AGG - chr2.4:16133659-16133678 MS.gene69821:intron 30.0%
AACCTGAACCATATTTCAAT+AGG - chr2.4:16135150-16135169 MS.gene69821:intron 30.0%
AAGAAAAGGCAACAAATTGA+TGG + chr2.4:16132865-16132884 None:intergenic 30.0%
ACATGCACAAAAATCTCTTA+AGG - chr2.4:16135007-16135026 MS.gene69821:intron 30.0%
ACCTAATGGAAATTAGCTAA+GGG - chr2.4:16133660-16133679 MS.gene69821:intron 30.0%
AGTTTCCTACAAAAATAGCT+AGG - chr2.4:16135928-16135947 MS.gene69821:intron 30.0%
ATCATATCACAGATTCTGAT+AGG - chr2.4:16134672-16134691 MS.gene69821:intron 30.0%
ATCCTATTGAAATATGGTTC+AGG + chr2.4:16135155-16135174 None:intergenic 30.0%
ATGAATTCAAAAGGAGTAGA+TGG + chr2.4:16135740-16135759 None:intergenic 30.0%
ATTCCACTATTTACAGAGAT+TGG - chr2.4:16134126-16134145 MS.gene69821:intron 30.0%
ATTCCATAAGCTCTTTCAAA+CGG - chr2.4:16131202-16131221 MS.gene69821:intron 30.0%
CAAAGAAAAAGGAACTCAAA+AGG - chr2.4:16131738-16131757 MS.gene69821:intron 30.0%
CAACTTATCAAGGCAAAATA+AGG + chr2.4:16133607-16133626 None:intergenic 30.0%
CACTAAGATATTCATTTGTC+TGG - chr2.4:16131855-16131874 MS.gene69821:intron 30.0%
CAGACATGATATTCAGATAT+TGG - chr2.4:16132088-16132107 MS.gene69821:intron 30.0%
CTGATTATATTAAGCGACAA+GGG - chr2.4:16136137-16136156 MS.gene69821:intron 30.0%
CTTTCTTATGGTCTATTGAT+CGG - chr2.4:16133365-16133384 MS.gene69821:CDS 30.0%
GAAAACAAGTGAAAAGACAA+TGG - chr2.4:16134069-16134088 MS.gene69821:intron 30.0%
GAAATATATACACTTTCCCT+TGG - chr2.4:16135679-16135698 MS.gene69821:intron 30.0%
GACATCATCCTATTGAAATA+TGG + chr2.4:16135161-16135180 None:intergenic 30.0%
GCATATTAGCAAATATACCT+AGG + chr2.4:16134949-16134968 None:intergenic 30.0%
TAAAAAAGAAGAGGTGATAG+AGG + chr2.4:16133858-16133877 None:intergenic 30.0%
TAAAAACATTCAATGTCCTC+AGG + chr2.4:16134361-16134380 None:intergenic 30.0%
TAAAAGAAAGGATACACGAA+AGG + chr2.4:16135641-16135660 None:intergenic 30.0%
TAAACTATTGATGTCCTCAT+AGG + chr2.4:16132684-16132703 None:intergenic 30.0%
TAACCAATCTCTGTAAATAG+TGG + chr2.4:16134132-16134151 None:intergenic 30.0%
TAGAGATAGAGAAGAGAAAA+GGG + chr2.4:16132396-16132415 None:intergenic 30.0%
TCATATCACAGATTCTGATA+GGG - chr2.4:16134673-16134692 MS.gene69821:intron 30.0%
TCTCGGATTACTAAACAATA+GGG + chr2.4:16132800-16132819 None:intergenic 30.0%
TGGTTTATGATAGAACGTTA+TGG - chr2.4:16135347-16135366 MS.gene69821:intron 30.0%
TGTTAGCAGAGAAATTCTAT+AGG + chr2.4:16132165-16132184 None:intergenic 30.0%
TTAAACTAGTACTGCTTTGT+GGG - chr2.4:16131586-16131605 MS.gene69821:intron 30.0%
TTAGAGATAGAGAAGAGAAA+AGG + chr2.4:16132397-16132416 None:intergenic 30.0%
TTCATTCTAGTGAAGATCTT+TGG + chr2.4:16132569-16132588 None:intergenic 30.0%
! AACTACTTGCCATTGTTATT+TGG - chr2.4:16131533-16131552 MS.gene69821:intron 30.0%
! AGATTGGTCAATTCAGAAAA+AGG + chr2.4:16133831-16133850 None:intergenic 30.0%
! AGTTGATATTCATAGAGATG+AGG - chr2.4:16134725-16134744 MS.gene69821:intron 30.0%
! CTAAGTGGTTGATTAGATTT+TGG - chr2.4:16133196-16133215 MS.gene69821:intron 30.0%
! GGTTTGATTTACTAGCTAAA+TGG + chr2.4:16136177-16136196 None:intergenic 30.0%
! GTATACTTTTAAACAGAGTC+TGG - chr2.4:16131665-16131684 MS.gene69821:intron 30.0%
! GTGTAGTTTTCTTCTTGAAA+GGG - chr2.4:16131390-16131409 MS.gene69821:intron 30.0%
! TGTGTAGTTTTCTTCTTGAA+AGG - chr2.4:16131389-16131408 MS.gene69821:intron 30.0%
! TTAAAGTTTGGGATTACGTA+AGG - chr2.4:16135108-16135127 MS.gene69821:CDS 30.0%
! TTCCTTTTTCTTTGATGCTT+TGG + chr2.4:16131732-16131751 None:intergenic 30.0%
!! ACATTTTGTAATGGAAGCTA+GGG - chr2.4:16134415-16134434 MS.gene69821:intron 30.0%
!! AGCATGTATGTAGGTTTTAT+AGG - chr2.4:16135966-16135985 MS.gene69821:CDS 30.0%
!! GGTTTTATAGGTGTATCAAA+TGG - chr2.4:16135978-16135997 MS.gene69821:CDS 30.0%
!! TACATTTTGTAATGGAAGCT+AGG - chr2.4:16134414-16134433 MS.gene69821:intron 30.0%
!! TCTTGTAGACAAGTTTTATC+GGG - chr2.4:16134476-16134495 MS.gene69821:intron 30.0%
!! TGATGGTGTTTTATGATTGA+TGG - chr2.4:16130945-16130964 MS.gene69821:intron 30.0%
!!! ATGGAAGTTTTTTCTCACTT+TGG - chr2.4:16135997-16136016 MS.gene69821:CDS 30.0%
!!! GAATTTTCAGTTGATGATGA+AGG - chr2.4:16133480-16133499 MS.gene69821:intron 30.0%
!!! TGAAATTAGGGTTTTGGATT+GGG + chr2.4:16130704-16130723 None:intergenic 30.0%
!!! TGGAAGTTTTTTCTCACTTT+GGG - chr2.4:16135998-16136017 MS.gene69821:CDS 30.0%
AACAAAGGGTGATGTAATAG+AGG - chr2.4:16134095-16134114 MS.gene69821:intron 35.0%
AACAACCAGTTAAAACCTGA+AGG - chr2.4:16132181-16132200 MS.gene69821:intron 35.0%
AACAGAGAGCCAAATAACAA+TGG + chr2.4:16131545-16131564 None:intergenic 35.0%
AAGACCGTTATTCAGAAATG+CGG - chr2.4:16133260-16133279 MS.gene69821:intron 35.0%
AATTGAACTGCTGTAGTTTG+GGG - chr2.4:16131427-16131446 MS.gene69821:intron 35.0%
ACATCATCCCAAAACTGTAT+TGG - chr2.4:16132131-16132150 MS.gene69821:intron 35.0%
ACATGGCATCTAATCTAACA+TGG + chr2.4:16135777-16135796 None:intergenic 35.0%
ACCCTATTGTTGCAAGTTAT+GGG - chr2.4:16135875-16135894 MS.gene69821:intron 35.0%
ACCCTTAGCTAATTTCCATT+AGG + chr2.4:16133664-16133683 None:intergenic 35.0%
AGAATTTAAATTGCGCACAC+AGG - chr2.4:16133787-16133806 MS.gene69821:intron 35.0%
ATAATGAGGCTATCATAGGA+AGG - chr2.4:16135315-16135334 MS.gene69821:intron 35.0%
ATCATTATGCTCTTAGACAC+AGG + chr2.4:16131909-16131928 None:intergenic 35.0%
ATGACACTCTCAAGGTTAAT+TGG + chr2.4:16132438-16132457 None:intergenic 35.0%
ATGACACTGTAAACTTATGC+AGG - chr2.4:16135572-16135591 MS.gene69821:intron 35.0%
ATGCATAATGAGGCTATCAT+AGG - chr2.4:16135311-16135330 MS.gene69821:intron 35.0%
ATTATATTAAGCGACAAGGG+AGG - chr2.4:16136140-16136159 MS.gene69821:intron 35.0%
CACATGATAGGATTACTTTG+AGG - chr2.4:16132056-16132075 MS.gene69821:intron 35.0%
CTTTGTGGGAATAATGTTCA+TGG - chr2.4:16131600-16131619 MS.gene69821:intron 35.0%
GAAGTTAGATATTAGTGGGA+TGG + chr2.4:16134275-16134294 None:intergenic 35.0%
GATTCAGTTAAACTAAGCCT+AGG - chr2.4:16134929-16134948 MS.gene69821:intron 35.0%
GCTGATTATATTAAGCGACA+AGG - chr2.4:16136136-16136155 MS.gene69821:intron 35.0%
GGTTATAATTGTAACCGTGT+GGG - chr2.4:16133681-16133700 MS.gene69821:intron 35.0%
GTCTCGGATTACTAAACAAT+AGG + chr2.4:16132801-16132820 None:intergenic 35.0%
GTTAAACTAGTACTGCTTTG+TGG - chr2.4:16131585-16131604 MS.gene69821:intron 35.0%
GTTATAATTGTAACCGTGTG+GGG - chr2.4:16133682-16133701 MS.gene69821:intron 35.0%
TACCCTATTGTTGCAAGTTA+TGG - chr2.4:16135874-16135893 MS.gene69821:intron 35.0%
TCAAAAGGAGTAGATGGTAA+TGG + chr2.4:16135734-16135753 None:intergenic 35.0%
TCTTATACTCCATAAGCCAT+CGG - chr2.4:16134223-16134242 MS.gene69821:intron 35.0%
TCTTGTGATTCTCAATTGCA+TGG - chr2.4:16134782-16134801 MS.gene69821:intron 35.0%
TGTTCTTGAAACTGACTGAT+CGG - chr2.4:16135425-16135444 MS.gene69821:intron 35.0%
TTAGAGTTTGACAAGTGGAA+AGG - chr2.4:16133456-16133475 MS.gene69821:intron 35.0%
TTATAATTGTAACCGTGTGG+GGG - chr2.4:16133683-16133702 MS.gene69821:intron 35.0%
TTATATTAAGCGACAAGGGA+GGG - chr2.4:16136141-16136160 MS.gene69821:intron 35.0%
TTGTGTTTGGTATTGCATGA+TGG - chr2.4:16130928-16130947 MS.gene69821:intron 35.0%
TTTCTTCTTGAAAGGGTTGA+CGG - chr2.4:16131397-16131416 MS.gene69821:intron 35.0%
! AAGTAATGGAGCCCTATTTA+CGG - chr2.4:16135467-16135486 MS.gene69821:intron 35.0%
! ATGTGGTGAAATTAGGGTTT+TGG + chr2.4:16130710-16130729 None:intergenic 35.0%
! GTTGTTGATTGAAGTCTAAG+TGG - chr2.4:16133181-16133200 MS.gene69821:intron 35.0%
! TCATAGGAAGGATTAGCATA+TGG - chr2.4:16135327-16135346 MS.gene69821:intron 35.0%
! TCTTAAACTAGTGTTTTCCC+TGG - chr2.4:16133084-16133103 MS.gene69821:intron 35.0%
! TGTTTGTTGCTGTTAGTTTG+TGG - chr2.4:16133914-16133933 MS.gene69821:intron 35.0%
! TTAGGGTGGATTTCATAATG+TGG - chr2.4:16131501-16131520 MS.gene69821:intron 35.0%
! TTTCGAGAAACTCTCCATTT+TGG + chr2.4:16131946-16131965 None:intergenic 35.0%
! TTTTATGGCGTTAACATGAC+TGG - chr2.4:16135196-16135215 MS.gene69821:intron 35.0%
! TTTTGTACACAACAGAGCAA+AGG - chr2.4:16132612-16132631 MS.gene69821:intron 35.0%
! TTTTGTTCAAGTGTTTAGGG+TGG - chr2.4:16131487-16131506 MS.gene69821:intron 35.0%
!! CTTGTAGACAAGTTTTATCG+GGG - chr2.4:16134477-16134496 MS.gene69821:intron 35.0%
!! GTTTCGACTGGGTTTTATAT+TGG - chr2.4:16135237-16135256 MS.gene69821:intron 35.0%
!! GTTTGTTGCTGTTAGTTTGT+GGG - chr2.4:16133915-16133934 MS.gene69821:intron 35.0%
!! TCTCAGGATTAGCTTTCTTA+TGG - chr2.4:16133353-16133372 MS.gene69821:CDS 35.0%
!! TTGGCTCTAAATCAATGAAC+TGG + chr2.4:16136198-16136217 None:intergenic 35.0%
!!! GCTCTCTGTTTTTTGTTATG+CGG - chr2.4:16131555-16131574 MS.gene69821:intron 35.0%
!!! GTAGGAATTTTTAGCAGTGT+TGG - chr2.4:16134044-16134063 MS.gene69821:intron 35.0%
!!! GTGAAATTAGGGTTTTGGAT+TGG + chr2.4:16130705-16130724 None:intergenic 35.0%
AAATGAACCAGTTTGCAACG+TGG + chr2.4:16131804-16131823 None:intergenic 40.0%
AACATCAAACCGTTCCAAAC+AGG + chr2.4:16132240-16132259 None:intergenic 40.0%
AAGGCAAAATAAGGAGAGCA+AGG + chr2.4:16133598-16133617 None:intergenic 40.0%
AATAAACCTTGTTGCGTTGC+AGG + chr2.4:16130875-16130894 None:intergenic 40.0%
AATACGGACATTCACCTGTT+TGG - chr2.4:16132223-16132242 MS.gene69821:intron 40.0%
ACATTCAATGTCCTCAGGAT+AGG + chr2.4:16134356-16134375 None:intergenic 40.0%
ACCTACATACATGCTAGAGT+AGG + chr2.4:16135961-16135980 None:intergenic 40.0%
ACCTCCGCATTTCTGAATAA+CGG + chr2.4:16133267-16133286 None:intergenic 40.0%
AGACCGTTTGAAAGAGCTTA+TGG + chr2.4:16131208-16131227 None:intergenic 40.0%
AGAGAAAAGGGTCTCAATCT+CGG + chr2.4:16132384-16132403 None:intergenic 40.0%
AGCACCAACAAACCGTAAAT+AGG + chr2.4:16135482-16135501 None:intergenic 40.0%
AGGTGATAGAGGGAATAGAT+TGG + chr2.4:16133847-16133866 None:intergenic 40.0%
AGTAGAAAATCCACCAAGGA+GGG + chr2.4:16132466-16132485 None:intergenic 40.0%
ATAGCCTCATTATGCATAGC+CGG + chr2.4:16135308-16135327 None:intergenic 40.0%
ATTGAACTGCTGTAGTTTGG+GGG - chr2.4:16131428-16131447 MS.gene69821:intron 40.0%
CAAACTGTCATGCACATGAT+AGG - chr2.4:16132044-16132063 MS.gene69821:intron 40.0%
CAAATCATTGTGCAGAGTCT+CGG + chr2.4:16132817-16132836 None:intergenic 40.0%
CACTAATTCCACTCTACCTA+TGG - chr2.4:16130611-16130630 MS.gene69821:CDS 40.0%
CAGTTAAAACCTGAAGGAAC+TGG - chr2.4:16132187-16132206 MS.gene69821:intron 40.0%
CATGTCATAGAGTTTCGACT+GGG - chr2.4:16135226-16135245 MS.gene69821:intron 40.0%
CTTTGGCAAACAAACAGCTT+TGG + chr2.4:16132552-16132571 None:intergenic 40.0%
GAACAGTAGAAAATCCACCA+AGG + chr2.4:16132470-16132489 None:intergenic 40.0%
GCAAACCTGAAGAGATTCTT+CGG + chr2.4:16130677-16130696 None:intergenic 40.0%
GCACCAACAAACCGTAAATA+GGG + chr2.4:16135481-16135500 None:intergenic 40.0%
GGGTAGGAGAGATAATACAA+AGG - chr2.4:16132329-16132348 MS.gene69821:intron 40.0%
GGGTTATAATTGTAACCGTG+TGG - chr2.4:16133680-16133699 MS.gene69821:intron 40.0%
TATAATTGTAACCGTGTGGG+GGG - chr2.4:16133684-16133703 MS.gene69821:intron 40.0%
TATCAATCGCATCACATCTC+TGG - chr2.4:16135599-16135618 MS.gene69821:intron 40.0%
TCAACACACGTTCACGTTAA+AGG - chr2.4:16131338-16131357 MS.gene69821:intron 40.0%
TCAACTTATACGAGCTCTCA+AGG + chr2.4:16131183-16131202 None:intergenic 40.0%
TCACACGATGAGTTATCCTT+CGG - chr2.4:16134163-16134182 MS.gene69821:intron 40.0%
TCCTCAGCATAATGAGTCTT+TGG + chr2.4:16136217-16136236 None:intergenic 40.0%
TCTGCAGCAAGATCTTCTAA+GGG + chr2.4:16133770-16133789 None:intergenic 40.0%
TGAGGACATTAGTAACATGG+AGG - chr2.4:16136231-16136250 MS.gene69821:CDS 40.0%
TGCTGAGGACATTAGTAACA+TGG - chr2.4:16136228-16136247 MS.gene69821:CDS 40.0%
TGGTCATGACCTGGTAAATA+CGG - chr2.4:16132207-16132226 MS.gene69821:intron 40.0%
TTCTGCAGCAAGATCTTCTA+AGG + chr2.4:16133771-16133790 None:intergenic 40.0%
! AGCCCATAACTTGCAACAAT+AGG + chr2.4:16135880-16135899 None:intergenic 40.0%
! ATCACATCTCTGGAAAGCAT+GGG - chr2.4:16135609-16135628 MS.gene69821:intron 40.0%
! GCCCATAACTTGCAACAATA+GGG + chr2.4:16135879-16135898 None:intergenic 40.0%
! GGAAAAGCACACGTTCATAT+AGG - chr2.4:16133386-16133405 MS.gene69821:CDS 40.0%
! GGCCAAAGCATCAAAGAAAA+AGG - chr2.4:16131727-16131746 MS.gene69821:intron 40.0%
! TGATGAAGGTACACTTGAAG+AGG - chr2.4:16133494-16133513 MS.gene69821:intron 40.0%
! TTCCATTAATCAGATGGTGG+TGG + chr2.4:16131275-16131294 None:intergenic 40.0%
!! AGACAAGTTTTATCGGGGAA+GGG - chr2.4:16134482-16134501 MS.gene69821:intron 40.0%
!! ATGCCTGCTTGTTATTCGAT+GGG - chr2.4:16133142-16133161 MS.gene69821:intron 40.0%
!! CAGTTCCTTCAGGTTTTAAC+TGG + chr2.4:16132189-16132208 None:intergenic 40.0%
!! TAGACAAGTTTTATCGGGGA+AGG - chr2.4:16134481-16134500 MS.gene69821:intron 40.0%
!! TATGCCTGCTTGTTATTCGA+TGG - chr2.4:16133141-16133160 MS.gene69821:intron 40.0%
!! TATTTTGTCAGGTCGGCTTT+CGG - chr2.4:16136054-16136073 MS.gene69821:intron 40.0%
AACCTGAAGAGATTCTTCGG+AGG + chr2.4:16130674-16130693 None:intergenic 45.0%
AAGCCAAAGCTCAAAAGGCT+AGG - chr2.4:16133415-16133434 MS.gene69821:intron 45.0%
ACCGTTATTCAGAAATGCGG+AGG - chr2.4:16133263-16133282 MS.gene69821:intron 45.0%
AGAAAGATCAGCCTATCCTG+AGG - chr2.4:16134342-16134361 MS.gene69821:intron 45.0%
AGAGGAAGCCAAAGCTCAAA+AGG - chr2.4:16133410-16133429 MS.gene69821:intron 45.0%
AGATGCCATGTCATTCGCAA+GGG - chr2.4:16135786-16135805 MS.gene69821:intron 45.0%
AGCCAAAGCTCAAAAGGCTA+GGG - chr2.4:16133416-16133435 MS.gene69821:intron 45.0%
AGGAACTCAAAAGGCAAGAG+AGG - chr2.4:16131747-16131766 MS.gene69821:intron 45.0%
AGTGTCATCAAAACCCTCCT+TGG - chr2.4:16132450-16132469 MS.gene69821:intron 45.0%
ATGAGGATTGAGAATCGCGA+TGG + chr2.4:16130642-16130661 None:intergenic 45.0%
ATGGCAGTGAGTGATGTAAG+TGG + chr2.4:16134249-16134268 None:intergenic 45.0%
CACCACCACCATCTGATTAA+TGG - chr2.4:16131270-16131289 MS.gene69821:intron 45.0%
CAGCAAGTAGTTAGACAGCT+TGG + chr2.4:16134899-16134918 None:intergenic 45.0%
CAGTAGAAAATCCACCAAGG+AGG + chr2.4:16132467-16132486 None:intergenic 45.0%
CAGTTATAAAACCCCCCACA+CGG + chr2.4:16133698-16133717 None:intergenic 45.0%
CATTAGGTTTCGATGCCCTA+TGG + chr2.4:16133648-16133667 None:intergenic 45.0%
CCAGTCGAAACTCTATGACA+TGG + chr2.4:16135228-16135247 None:intergenic 45.0%
CCATGTCATAGAGTTTCGAC+TGG - chr2.4:16135225-16135244 MS.gene69821:intron 45.0%
CCTGAGACTAAACCAGAACA+AGG + chr2.4:16133340-16133359 None:intergenic 45.0%
CTGCGTTAGAGTTTGACAAG+TGG - chr2.4:16133451-16133470 MS.gene69821:intron 45.0%
CTTACATCACTCACTGCCAT+CGG - chr2.4:16134249-16134268 MS.gene69821:intron 45.0%
GAAAGTGACAATGAAGCTGC+TGG - chr2.4:16131692-16131711 MS.gene69821:intron 45.0%
GAGCCCTATTTACGGTTTGT+TGG - chr2.4:16135475-16135494 MS.gene69821:intron 45.0%
GCACACGTTCATATAGGAAG+AGG - chr2.4:16133392-16133411 MS.gene69821:CDS 45.0%
GCCAAAGACTCATTATGCTG+AGG - chr2.4:16136213-16136232 MS.gene69821:CDS 45.0%
GCCTACTCTAGCATGTATGT+AGG - chr2.4:16135957-16135976 MS.gene69821:CDS 45.0%
GGAACTCAAAAGGCAAGAGA+GGG - chr2.4:16131748-16131767 MS.gene69821:intron 45.0%
GGACATTCACCTGTTTGGAA+CGG - chr2.4:16132228-16132247 MS.gene69821:intron 45.0%
GGTGAATGTCCGTATTTACC+AGG + chr2.4:16132219-16132238 None:intergenic 45.0%
GTGAGTCAACATCCTTGTTC+TGG - chr2.4:16133325-16133344 MS.gene69821:CDS 45.0%
TAAAAGGGGAGGGTTGTGTT+AGG + chr2.4:16135273-16135292 None:intergenic 45.0%
TAGATGCCATGTCATTCGCA+AGG - chr2.4:16135785-16135804 MS.gene69821:intron 45.0%
TTCAGAAATGCGGAGGTTGA+AGG - chr2.4:16133270-16133289 MS.gene69821:CDS 45.0%
TTCCTCCGAAGAATCTCTTC+AGG - chr2.4:16130669-16130688 MS.gene69821:CDS 45.0%
TTCGGAGGAAGATGAAGATG+AGG + chr2.4:16130659-16130678 None:intergenic 45.0%
TTCTCACTTTGGGCTGTCTA+GGG - chr2.4:16136008-16136027 MS.gene69821:CDS 45.0%
TTGTGGGAGAAACAGTGTCA+CGG - chr2.4:16133931-16133950 MS.gene69821:intron 45.0%
TTTAGATAAAGGGGGGGCAA+AGG - chr2.4:16132293-16132312 MS.gene69821:intron 45.0%
TTTCTCACTTTGGGCTGTCT+AGG - chr2.4:16136007-16136026 MS.gene69821:CDS 45.0%
TTTGAAAGGCCGAAGAAGCT+CGG - chr2.4:16133227-16133246 MS.gene69821:intron 45.0%
! ACACAACCCTCCCCTTTTAT+TGG - chr2.4:16135274-16135293 MS.gene69821:intron 45.0%
! CACAACCCTCCCCTTTTATT+GGG - chr2.4:16135275-16135294 MS.gene69821:intron 45.0%
! CATCACATCTCTGGAAAGCA+TGG - chr2.4:16135608-16135627 MS.gene69821:intron 45.0%
! CTGCAATGAGAAGTGTAGAG+AGG + chr2.4:16130591-16130610 None:intergenic 45.0%
! TTCGGGTGTCATGGATGATA+GGG - chr2.4:16136072-16136091 MS.gene69821:intron 45.0%
! TTGTTATTCGATGGGGGAGA+GGG - chr2.4:16133150-16133169 MS.gene69821:intron 45.0%
! TTTCGGGTGTCATGGATGAT+AGG - chr2.4:16136071-16136090 MS.gene69821:intron 45.0%
!! ATTTTGTCAGGTCGGCTTTC+GGG - chr2.4:16136055-16136074 MS.gene69821:intron 45.0%
!! CATAGGGCATCGAAACCTAA+TGG - chr2.4:16133646-16133665 MS.gene69821:intron 45.0%
!! CATTAATCAGATGGTGGTGG+TGG + chr2.4:16131272-16131291 None:intergenic 45.0%
!! CCTTGTTCTGGTTTAGTCTC+AGG - chr2.4:16133337-16133356 MS.gene69821:CDS 45.0%
!! GGGTTTTGATGACACTCTCA+AGG + chr2.4:16132446-16132465 None:intergenic 45.0%
!! TGCCTGCTTGTTATTCGATG+GGG - chr2.4:16133143-16133162 MS.gene69821:intron 45.0%
!! TTCCCTAGCCTTTTGAGCTT+TGG + chr2.4:16133421-16133440 None:intergenic 45.0%
!! AACAATTAAATAATATTTAA+TGG + chr2.4:16133025-16133044 None:intergenic 5.0%
AAACCTTGTTGCGTTGCAGG+CGG + chr2.4:16130872-16130891 None:intergenic 50.0%
AAGCGAGTGCAAGTCCTATG+AGG - chr2.4:16132667-16132686 MS.gene69821:intron 50.0%
AAGGTTTCTGCTGGCACTCA+TGG + chr2.4:16132503-16132522 None:intergenic 50.0%
AATCGCGATGGCGTTTCCAT+AGG + chr2.4:16130630-16130649 None:intergenic 50.0%
ACTAAGTGGGGTCGGCTATA+TGG + chr2.4:16135384-16135403 None:intergenic 50.0%
AGAGTCTACGCAAGATCAGG+AGG - chr2.4:16134625-16134644 MS.gene69821:intron 50.0%
AGCTCAAAAGGCTAGGGAAG+AGG - chr2.4:16133422-16133441 MS.gene69821:intron 50.0%
AGGTACACTTGAAGAGGAGC+AGG - chr2.4:16133500-16133519 MS.gene69821:intron 50.0%
AGGTCATGACCAGTTCCTTC+AGG + chr2.4:16132199-16132218 None:intergenic 50.0%
ATATAGCCGACCCCACTTAG+TGG - chr2.4:16135383-16135402 MS.gene69821:intron 50.0%
CCAAGCCCAATAAAAGGGGA+GGG + chr2.4:16135283-16135302 None:intergenic 50.0%
CCAGTTTGCAACGTGGAATG+AGG + chr2.4:16131797-16131816 None:intergenic 50.0%
CCTCATTCCACGTTGCAAAC+TGG - chr2.4:16131794-16131813 MS.gene69821:intron 50.0%
CGGTCCCAAGCCCAATAAAA+GGG + chr2.4:16135288-16135307 None:intergenic 50.0%
CTTTGACTGCCGAGCTTCTT+CGG + chr2.4:16133239-16133258 None:intergenic 50.0%
GAGCAGAAGAAGGTTTCTGC+TGG + chr2.4:16132512-16132531 None:intergenic 50.0%
GATATTAGTGGGATGGCCGA+TGG + chr2.4:16134268-16134287 None:intergenic 50.0%
GCAAAGGAGGAGGAAGAATG+GGG - chr2.4:16132309-16132328 MS.gene69821:intron 50.0%
GGCAAAGGAGGAGGAAGAAT+GGG - chr2.4:16132308-16132327 MS.gene69821:intron 50.0%
GGTCCCAAGCCCAATAAAAG+GGG + chr2.4:16135287-16135306 None:intergenic 50.0%
GTCATCAAAACCCTCCTTGG+TGG - chr2.4:16132453-16132472 MS.gene69821:intron 50.0%
TATAGCCGACCCCACTTAGT+GGG - chr2.4:16135384-16135403 MS.gene69821:intron 50.0%
TCAAGCCCTTGCGAATGACA+TGG + chr2.4:16135794-16135813 None:intergenic 50.0%
TCCCCCATCGAATAACAAGC+AGG + chr2.4:16133148-16133167 None:intergenic 50.0%
TCGAGAGTCTACGCAAGATC+AGG - chr2.4:16134622-16134641 MS.gene69821:intron 50.0%
TCTCACTTTGGGCTGTCTAG+GGG - chr2.4:16136009-16136028 MS.gene69821:CDS 50.0%
TGAAGGAACTGGTCATGACC+TGG - chr2.4:16132198-16132217 MS.gene69821:intron 50.0%
TGAGTGATGTAAGTGGCCGA+TGG + chr2.4:16134242-16134261 None:intergenic 50.0%
TGGCGTTTCCATAGGTAGAG+TGG + chr2.4:16130622-16130641 None:intergenic 50.0%
TGTAAGTGGCCGATGGCTTA+TGG + chr2.4:16134235-16134254 None:intergenic 50.0%
TGTGGGAGAAACAGTGTCAC+GGG - chr2.4:16133932-16133951 MS.gene69821:intron 50.0%
TGTTATTCGATGGGGGAGAG+GGG - chr2.4:16133151-16133170 MS.gene69821:intron 50.0%
! AAGCCTTGTCCCACTAAGTG+GGG + chr2.4:16135396-16135415 None:intergenic 50.0%
! CAAGCCTTGTCCCACTAAGT+GGG + chr2.4:16135397-16135416 None:intergenic 50.0%
! CCTCCCCTTTTATTGGGCTT+GGG - chr2.4:16135281-16135300 MS.gene69821:intron 50.0%
! CCTTTTATTGGGCTTGGGAC+CGG - chr2.4:16135286-16135305 MS.gene69821:intron 50.0%
! GTTGAAGGATGAAGAGCGTG+AGG - chr2.4:16133285-16133304 MS.gene69821:CDS 50.0%
! TCGGGTGTCATGGATGATAG+GGG - chr2.4:16136073-16136092 MS.gene69821:intron 50.0%
!! CTTGTTATTCGATGGGGGAG+AGG - chr2.4:16133149-16133168 MS.gene69821:intron 50.0%
!! GCCTGCTTGTTATTCGATGG+GGG - chr2.4:16133144-16133163 MS.gene69821:intron 50.0%
AGATAAAGGGGGGGCAAAGG+AGG - chr2.4:16132296-16132315 MS.gene69821:intron 55.0%
AGGAGGAGGAAGAATGGGGT+AGG - chr2.4:16132313-16132332 MS.gene69821:intron 55.0%
CCACTTAGTGGGACAAGGCT+TGG - chr2.4:16135395-16135414 MS.gene69821:intron 55.0%
CCCAAGCCCAATAAAAGGGG+AGG + chr2.4:16135284-16135303 None:intergenic 55.0%
CCGGTCCCAAGCCCAATAAA+AGG + chr2.4:16135289-16135308 None:intergenic 55.0%
CTTGTCCCACTAAGTGGGGT+CGG + chr2.4:16135392-16135411 None:intergenic 55.0%
GCTCGAGAGTGAGCAGAAGA+AGG + chr2.4:16132522-16132541 None:intergenic 55.0%
GGGACCGGCTATGCATAATG+AGG - chr2.4:16135301-16135320 MS.gene69821:intron 55.0%
GGGCAAAGGAGGAGGAAGAA+TGG - chr2.4:16132307-16132326 MS.gene69821:intron 55.0%
GTCTACGCAAGATCAGGAGG+TGG - chr2.4:16134628-16134647 MS.gene69821:intron 55.0%
GTTATTCGATGGGGGAGAGG+GGG - chr2.4:16133152-16133171 MS.gene69821:intron 55.0%
TCTCGGCTGAGAGGCTACAA+TGG + chr2.4:16132367-16132386 None:intergenic 55.0%
TTATTCGATGGGGGAGAGGG+GGG - chr2.4:16133153-16133172 MS.gene69821:intron 55.0%
! AGCTGCTGGTGATGAGCATG+AGG - chr2.4:16131706-16131725 MS.gene69821:intron 55.0%
! CCAAGCCTTGTCCCACTAAG+TGG + chr2.4:16135398-16135417 None:intergenic 55.0%
! CCCTCCCCTTTTATTGGGCT+TGG - chr2.4:16135280-16135299 MS.gene69821:intron 55.0%
CAACCGTTCTCCGACGCATG+CGG + chr2.4:16130823-16130842 None:intergenic 60.0%
CGACCCCACTTAGTGGGACA+AGG - chr2.4:16135390-16135409 MS.gene69821:intron 60.0%
CGTGCAGCAGGTTCTCTGAC+TGG + chr2.4:16130785-16130804 None:intergenic 60.0%
GGCAAGAGAGGGAAGCTCGA+CGG - chr2.4:16131759-16131778 MS.gene69821:intron 60.0%
GGGTCTCAATCTCGGCTGAG+AGG + chr2.4:16132376-16132395 None:intergenic 60.0%
TAAAGGGGGGGCAAAGGAGG+AGG - chr2.4:16132299-16132318 MS.gene69821:intron 60.0%
! AGGTCGGCTTTCGGGTGTCA+TGG - chr2.4:16136063-16136082 MS.gene69821:intron 60.0%
! TGAGGCGCAGGAGCGTAAGT+TGG - chr2.4:16133303-16133322 MS.gene69821:CDS 60.0%
AGAGAGGGAAGCTCGACGGC+AGG - chr2.4:16131763-16131782 MS.gene69821:intron 65.0%
CGTCGGAGAACGGTTGCGTC+TGG - chr2.4:16130827-16130846 MS.gene69821:intron 65.0%
GCTCCGCCTGCAACGCAACA+AGG - chr2.4:16130866-16130885 MS.gene69821:intron 65.0%
TCGCCGCATGCGTCGGAGAA+CGG - chr2.4:16130817-16130836 MS.gene69821:intron 65.0%
! GGATGAAGAGCGTGAGGCGC+AGG - chr2.4:16133291-16133310 MS.gene69821:CDS 65.0%
ACGCATGCGGCGAGTAGCGG+TGG + chr2.4:16130810-16130829 None:intergenic 70.0%
CCGACGCATGCGGCGAGTAG+CGG + chr2.4:16130813-16130832 None:intergenic 70.0%
CCGCTACTCGCCGCATGCGT+CGG - chr2.4:16130810-16130829 MS.gene69821:intron 70.0%
GTAGCGGTGGCACGTGCAGC+AGG + chr2.4:16130797-16130816 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 16130565 16136270 16130565 ID=MS.gene69821
chr2.4 mRNA 16130565 16136270 16130565 ID=MS.gene69821.t1;Parent=MS.gene69821
chr2.4 exon 16136145 16136270 16136145 ID=MS.gene69821.t1.exon1;Parent=MS.gene69821.t1
chr2.4 CDS 16136145 16136270 16136145 ID=cds.MS.gene69821.t1;Parent=MS.gene69821.t1
chr2.4 exon 16135948 16136056 16135948 ID=MS.gene69821.t1.exon2;Parent=MS.gene69821.t1
chr2.4 CDS 16135948 16136056 16135948 ID=cds.MS.gene69821.t1;Parent=MS.gene69821.t1
chr2.4 exon 16135051 16135154 16135051 ID=MS.gene69821.t1.exon3;Parent=MS.gene69821.t1
chr2.4 CDS 16135051 16135154 16135051 ID=cds.MS.gene69821.t1;Parent=MS.gene69821.t1
chr2.4 exon 16133511 16133600 16133511 ID=MS.gene69821.t1.exon4;Parent=MS.gene69821.t1
chr2.4 CDS 16133511 16133600 16133511 ID=cds.MS.gene69821.t1;Parent=MS.gene69821.t1
chr2.4 exon 16133269 16133427 16133269 ID=MS.gene69821.t1.exon5;Parent=MS.gene69821.t1
chr2.4 CDS 16133269 16133427 16133269 ID=cds.MS.gene69821.t1;Parent=MS.gene69821.t1
chr2.4 exon 16133027 16133083 16133027 ID=MS.gene69821.t1.exon6;Parent=MS.gene69821.t1
chr2.4 CDS 16133027 16133083 16133027 ID=cds.MS.gene69821.t1;Parent=MS.gene69821.t1
chr2.4 exon 16131205 16131241 16131205 ID=MS.gene69821.t1.exon7;Parent=MS.gene69821.t1
chr2.4 CDS 16131205 16131241 16131205 ID=cds.MS.gene69821.t1;Parent=MS.gene69821.t1
chr2.4 exon 16130565 16130770 16130565 ID=MS.gene69821.t1.exon8;Parent=MS.gene69821.t1
chr2.4 CDS 16130565 16130770 16130565 ID=cds.MS.gene69821.t1;Parent=MS.gene69821.t1
Gene Sequence

>MS.gene69821

ATGGATGATTTTTTCGTAGCAATCCTCTCTACACTTCTCATTGCAGCACTAATTCCACTCTACCTATGGAAACGCCATCGCGATTCTCAATCCTCATCTTCATCTTCCTCCGAAGAATCTCTTCAGGTTTGCAATTCCCAATCCAAAACCCTAATTTCACCACATTTTAACAATAAAACTCGAATTCTTAGTTTAATTGTGAATGAATCATCAGGCTCCAGTCAGAGAACCTGCTGCACGTGCCACCGCTACTCGCCGCATGCGTCGGAGAACGGTTGCGTCTGGTGCTAGCTCTTCATCAGCTCCGCCTGCAACGCAACAAGGTTTATTGATCGTTTTGATTTAATTTTGATTTAATTTTATTTGTGTTTGGTATTGCATGATGGTGTTTTATGATTGATGGATTAGAATAAATAATTGAATTAATTCTTGTTTGGATAAACAGCTTAATTAAACGATTTTCGTATAATTGTTAATGCTTATGTATACGCTATTTGCATCACAAAAGATGAAATACTGTCAAAATGTTTTTATATAAAGCTGCAAGTTGTTTTTATAAGTTATCATGGAGAGCTTGTGTAAATAAGCTAAAAATAAGTTGTTTTTATAAGCTATCCTTGAGAGCTCGTATAAGTTGATTCCATAAGCTCTTTCAAACGGTCTCACAAATGTTTATATCAGTAAATAAGATCAAGTAAGTCAATCCACCACCACCATCTGATTAATGGAATTTTATTGTGAAAATGAAGAAGCTACAATATGTAGCTTGTAACTCAACACACGTTCACGTTAAAGGCAATGTTAAAAACAAACACATACTAAGTTGTGTAGTTTTCTTCTTGAAAGGGTTGACGGACTTGAAAATTGAACTGCTGTAGTTTGGGGGATCTTTGTGATATTCCTTTTCTTTTCCATTTCACTATTTTGTTCAAGTGTTTAGGGTGGATTTCATAATGTGGAGTCAAGTCAACTACTTGCCATTGTTATTTGGCTCTCTGTTTTTTGTTATGCGGAAATATTGTTAAACTAGTACTGCTTTGTGGGAATAATGTTCATGGATTGCATCTTGAAATCGAGTTGCATTTGTGAAGTGATCAACTGTATACTTTTAAACAGAGTCTGGAGATGAAAGTGACAATGAAGCTGCTGGTGATGAGCATGAGGCCAAAGCATCAAAGAAAAAGGAACTCAAAAGGCAAGAGAGGGAAGCTCGACGGCAGGTATTCTTTCCTCATTCCACGTTGCAAACTGGTTCATTTATCTATTGTTAGTTTTATTCATTATTAAAGACACTAAGATATTCATTTGTCTGGCTTCTTGTTATTCGCAATGTGTTCAGAACCTGTGTCTAAGAGCATAATGATTTAAATTTGACTAACCAAAATGGAGAGTTTCTCGAAATGAAAGATGTTATGTGTATATGAAGGTTTAATAAGGTTACTGACATTTATACATTGTGTAAATTATCAAACTATTGTTCAAACTGTCATGCACATGATAGGATTACTTTGAGGAATACTCTACAGACATGATATTCAGATATTGGTGAAAAATATATTATTCAAGACATCATCCCAAAACTGTATTGGACAATTAACCTATAGAATTTCTCTGCTAACAACCAGTTAAAACCTGAAGGAACTGGTCATGACCTGGTAAATACGGACATTCACCTGTTTGGAACGGTTTGATGTTGAGACTTTTTTGAAAAATAAAAGGAAATAATATTTTAGATAAAGGGGGGGCAAAGGAGGAGGAAGAATGGGGTAGGAGAGATAATACAAAGGATAATTTGGCTTCCATTGTAGCCTCTCAGCCGAGATTGAGACCCTTTTCTCTTCTCTATCTCTAAAACTTGACCTTCTTTTAACCAATTAACCTTGAGAGTGTCATCAAAACCCTCCTTGGTGGATTTTCTACTGTTCTTTGCTTCAGCCATGAGTGCCAGCAGAAACCTTCTTCTGCTCACTCTCGAGCTAAACAACCAAAGCTGTTTGTTTGCCAAAGATCTTCACTAGAATGAACCCATCTCATAAATCAAAATCTGTTTTGTACACAACAGAGCAAAGGTACTGATAACAGAACAATAAACAAGTGGGAGAAAGCGAGTGCAAGTCCTATGAGGACATCAATAGTTTAATTTTGTTCTCAGGTCATCACTCATTATTAAAAATGGGTACAATGATTAAACAACACTATATTGTTGCGGCCATGACTCTATTTTATGCAATACCCTATTGTTTAGTAATCCGAGACTCTGCACAATGATTTGACAACACTAGCAGTTGATTATTATGCCATCAATTTGTTGCCTTTTCTTACTTGTTATTTGATTTCTGGTACATATATTTGTGATTTTAAAATATTACTGCATGCAATTTTTTATTCTTTAAAATTATAAATATTCTAATTCTAAATATAATTTTTTGACTAATATTTAATATATTATATAAAATTCCATTAAATATTATTTAATTGTTAACAGTTCAACATGATTTTATCGCAATTAGAGCATTAAATCTTAAACTAGTGTTTTCCCTGGTTAAATGATTAGTTAGTTTTTTATATATTGTATGTATGCCTGCTTGTTATTCGATGGGGGAGAGGGGGGTCTATGTTGTTGATTGAAGTCTAAGTGGTTGATTAGATTTTGGTACTTCTTTTTGAAAGGCCGAAGAAGCTCGGCAGTCAAAGCAAGACCGTTATTCAGAAATGCGGAGGTTGAAGGATGAAGAGCGTGAGGCGCAGGAGCGTAAGTTGGTGAGTCAACATCCTTGTTCTGGTTTAGTCTCAGGATTAGCTTTCTTATGGTCTATTGATCGGAAAAGCACACGTTCATATAGGAAGAGGAAGCCAAAGCTCAAAAGGCTAGGGAAGAGGAAGCTGCTGCGTTAGAGTTTGACAAGTGGAAAGGTGAATTTTCAGTTGATGATGAAGGTACACTTGAAGAGGAGCAGGATAAAACTGAAGATTTGCTTACCAATTTTGTTGAATATATAAAGGTTATTTTCTGTTTTGTACTTTCTATATCCTTGCTCTCCTTATTTTGCCTTGATAAGTTGTCAAAAGTTTATTTATGTCCATAGGGCATCGAAACCTAATGGAAATTAGCTAAGGGTTATAATTGTAACCGTGTGGGGGGTTTTATAACTGTTCTAATTTAGACAAATTTTGTGTAATTATTCAGAAGCACAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGCACACAGGTATTCTTTCTATTCTTTTCCTTTTTCTGAATTGACCAATCTATTCCCTCTATCACCTCTTCTTTTTTATATTCTATTCCCTCTATCACCTCTTCTTTTTTATATTGTTTGTTGCTGTTAGTTTGTGGGAGAAACAGTGTCACGGGATAACAAATTCTGCTATGCCAGTATGTTTAATGATTTATATGATAGATCTTTTGTATCTAGTTTTACTTTTCTACTTACATATTTAGTTGTAGGAATTTTTAGCAGTGTTGGCAGAAAACAAGTGAAAAGACAATGGGAAAACAAAGGGTGATGTAATAGAGGAACATAGTATTCCACTATTTACAGAGATTGGTTATATACAGTTATTCACACGATGAGTTATCCTTCGGTTTATATTAACAAACATGACTAGTATTATACAGGGACTCTTATACTCCATAAGCCATCGGCCACTTACATCACTCACTGCCATCGGCCATCCCACTAATATCTAACTTCTTTTCCCAAACATTATTAATTGGAAGTTAGTATAAAATATAAAAATTAGAAAGATCAGCCTATCCTGAGGACATTGAATGTTTTTAGTTTTTTTTTTTTTTTTTTGTGATTTTTTATCTTACATTTTGTAATGGAAGCTAGGGAGAACCAAATGTTCAACATAGATGATATCACTATGATATCTTGTAGACAAGTTTTATCGGGGAAGGGAAAAACAGAGATGCTTGACAGAAAACATAATAATCAATTGTTTAATTCGTGGGTGATCATATATTTATATTAATAATGCTGCTATACAAAGACTTGTTGTACCCAATGTTTTAAAAATCGAGAGTCTACGCAAGATCAGGAGGTGGTTGAAAGATCGTAATTCAAGAATCATATCACAGATTCTGATAGGGAATATATATACTTATTATATACTGTTAAAAGTTGATATTCATAGAGATGAGGAGAATCAGCTAGAGAGAGTGATTGTGTAACTGAATCTTGTGATTCTCAATTGCATGGAAACTGTGATGATTACAAGTATTTATACACTGTTAGAATCGTAGTGAACTCCTAGCTGAGATGTCAGCTGTCATAACTACTTGACAGCTGTCCAAGCTGTCTAACTACTTGCTGAGCAAGTTAAGATTCAGTTAAACTAAGCCTAGGTATATTTGCTAATATGCTAAGCTGTATTTCGTAATACATACATATAATTAAATACACATGCACAAAAATCTCTTAAGGATACAAGAAACAATCTCTTAAGTTTGGGATCCTTAAGTTTATAGAATATTTATATACAAGGATACAAGAAACAATATCTTAAAGTTTGGGATTACGTAAGGATAAGATACAACAGAATCAAACCTGAACCATATTTCAATAGGATGATGTCTCGACTACTTTATAATTTTATGGCGTTAACATGACTGGTCAGATCCATGTCATAGAGTTTCGACTGGGTTTTATATTGGCTGACGACTGCCTAACACAACCCTCCCCTTTTATTGGGCTTGGGACCGGCTATGCATAATGAGGCTATCATAGGAAGGATTAGCATATGGTTTATGATAGAACGTTATGGCATAATTTGATCCATATAGCCGACCCCACTTAGTGGGACAAGGCTTGGTTGTTGTTGTTCTTGAAACTGACTGATCGGATCCTTTTCTAATGTTTCTAAGTAATGGAGCCCTATTTACGGTTTGTTGGTGCTCTTTCAATTTGTTCATGAATCAATTTAATATATCTAAGTAATATATTTTTCATTTTCGGGGTTCTTTTTTATGACACTGTAAACTTATGCAGGAATGTATCAATCGCATCACATCTCTGGAAAGCATGGGTAAGAGCCTTTCGTGTATCCTTTCTTTTAAATTACCATCTATCAAAAGAAATATATACACTTTCCCTTGGTTTATTTTTCATCATAGTTCTTGTCTTCTCCATTACCATCTACTCCTTTTGAATTCATATACAATCAATTTACCATGTTAGATTAGATGCCATGTCATTCGCAAGGGCTTGAATAAGTAGAAGAAATATTTGACATAATTGGGACTGCTGATTTTTTATTTATAATGACTTATACCCTATTGTTGCAAGTTATGGGCTGTCTATACTCTTATTGATTTTACTTAGAAGTTTCCTACAAAAATAGCTAGGTTTTATGCCTACTCTAGCATGTATGTAGGTTTTATAGGTGTATCAAATGGAAGTTTTTTCTCACTTTGGGCTGTCTAGGGGCAAACATAAATAATGATTTATTTATTTTGTCAGGTCGGCTTTCGGGTGTCATGGATGATAGGGGAAAATTCATTTACATCTCACAGGAAGAGATGAAAGCTGTTGCTGATTATATTAAGCGACAAGGGAGGGTTAGCATTTCCCATTTAGCTAGTAAATCAAACCAGTTCATTGATTTAGAGCCAAAGACTCATTATGCTGAGGACATTAGTAACATGGAGGAGATAACTGTCAACTGA

Protein sequence

>MS.gene69821.t1

MDDFFVAILSTLLIAALIPLYLWKRHRDSQSSSSSSSEESLQAPVREPAARATATRRMRRRTVASGASSSSAPPATQQESGDESDNEAAGDEHEAKASKKKELKRQEREARRQAEEARQSKQDRYSEMRRLKDEEREAQERKLEEEAKAQKAREEEAAALEFDKWKGEFSVDDEGTLEEEQDKTEDLLTNFVEYIKKHKCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRGKFIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKTHYAEDISNMEEITVN