AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene77481

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77481.t1 MTR_3g083350 93.849 504 18 1 1 504 1 491 0.0 865
MS.gene77481.t1 MTR_7g117270 35.556 405 226 9 6 390 26 415 1.19e-65 225
MS.gene77481.t1 MTR_3g105530 28.281 442 268 13 32 446 7 426 3.12e-35 139
MS.gene77481.t1 MTR_7g107280 25.490 408 278 9 38 434 14 406 2.32e-29 121
MS.gene77481.t1 MTR_8g089370 27.479 353 236 8 48 393 29 368 4.10e-29 120
MS.gene77481.t1 MTR_6g033595 26.096 456 279 15 34 454 25 457 6.30e-29 120
MS.gene77481.t1 MTR_7g088530 25.065 383 265 8 22 399 12 377 7.43e-27 114
MS.gene77481.t1 MTR_1g072550 27.200 375 249 12 44 407 18 379 4.10e-26 111
MS.gene77481.t1 MTR_0153s0070 31.010 287 162 8 81 350 68 335 1.92e-25 108
MS.gene77481.t1 MTR_1g019170 27.688 372 229 9 83 447 52 390 4.76e-25 108
MS.gene77481.t1 MTR_3g074730 28.528 326 213 5 72 391 73 384 8.61e-25 107
MS.gene77481.t1 MTR_1g032040 27.123 365 247 10 50 407 27 379 1.18e-24 107
MS.gene77481.t1 MTR_1g032380 27.123 365 247 10 50 407 27 379 1.18e-24 107
MS.gene77481.t1 MTR_3g029990 27.913 369 232 9 83 447 52 390 2.87e-24 108
MS.gene77481.t1 MTR_3g029990 27.913 369 232 9 83 447 52 390 3.90e-24 107
MS.gene77481.t1 MTR_3g030020 27.697 343 222 7 106 447 30 347 1.56e-23 103
MS.gene77481.t1 MTR_1g098960 27.446 368 235 8 83 447 54 392 4.18e-21 96.7
MS.gene77481.t1 MTR_4g053720 27.829 327 211 10 52 367 20 332 5.85e-21 95.5
MS.gene77481.t1 MTR_6g043850 25.220 341 238 7 51 389 25 350 7.07e-21 97.8
MS.gene77481.t1 MTR_2g006740 93.182 44 3 0 295 338 12 55 2.81e-20 85.1
MS.gene77481.t1 MTR_7g018630 26.100 341 232 7 65 401 62 386 8.05e-20 92.8
MS.gene77481.t1 MTR_3g063230 24.658 365 223 13 57 395 53 391 1.58e-19 92.0
MS.gene77481.t1 MTR_0153s0070 25.389 386 213 11 81 446 38 368 2.82e-18 87.4
MS.gene77481.t1 MTR_2g067960 24.350 423 273 13 77 480 34 428 5.27e-18 87.4
MS.gene77481.t1 MTR_3g063230 25.287 348 218 14 57 395 53 367 2.88e-16 81.6
MS.gene77481.t1 MTR_4g009790 30.894 123 77 1 525 639 31 153 3.99e-16 76.6
MS.gene77481.t1 MTR_3g448960 28.571 252 150 6 83 331 54 278 1.05e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77481.t1 AT5G62990 60.641 437 152 4 32 468 35 451 1.30e-166 486
MS.gene77481.t1 AT4G01037 32.648 438 239 7 6 406 12 430 1.27e-63 219
MS.gene77481.t1 AT5G48040 30.848 389 242 9 54 429 37 411 7.50e-35 137
MS.gene77481.t1 AT5G45790 28.775 351 220 9 57 398 69 398 7.19e-32 129
MS.gene77481.t1 AT5G45790 30.120 332 198 9 80 398 3 313 2.57e-30 123
MS.gene77481.t1 AT3G63090 28.534 382 251 11 30 402 9 377 1.19e-29 122
MS.gene77481.t1 AT5G21970 29.282 362 223 9 52 397 44 388 2.90e-28 119
MS.gene77481.t1 AT5G21970 29.282 362 223 9 52 397 44 388 2.90e-28 119
MS.gene77481.t1 AT2G31290 28.035 346 228 8 56 401 28 352 9.05e-28 116
MS.gene77481.t1 AT2G31290 28.035 346 228 8 56 401 28 352 9.05e-28 116
MS.gene77481.t1 AT3G58520 27.049 366 242 9 54 408 33 384 1.31e-25 110
MS.gene77481.t1 AT4G33495 26.972 393 231 11 57 423 47 409 4.66e-25 108
MS.gene77481.t1 AT4G08940 28.438 320 214 5 72 390 81 386 1.06e-24 107
MS.gene77481.t1 AT1G71850 25.253 396 259 12 53 429 28 405 1.31e-24 108
MS.gene77481.t1 AT4G24320 29.781 319 185 10 112 407 79 381 6.90e-24 104
MS.gene77481.t1 AT1G79120 28.814 354 207 12 58 389 64 394 3.60e-23 103
MS.gene77481.t1 AT1G79120 28.814 354 207 12 58 389 64 394 3.60e-23 103
MS.gene77481.t1 AT1G06440 28.344 314 198 9 90 390 71 370 6.60e-23 102
MS.gene77481.t1 AT2G39120 25.849 383 250 11 54 427 29 386 3.64e-22 99.8
MS.gene77481.t1 AT3G58520 27.632 304 197 8 116 408 81 372 4.01e-22 99.8

Find 156 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTCCTCTCAATTTATT+TGG 0.066976 3.2:-72133002 None:intergenic
ACAACAAGATTGGAGAATTT+TGG 0.158344 3.2:+72133429 MS.gene77481:CDS
TGATGAGAAGGGTAACTTAT+TGG 0.227907 3.2:+72133097 MS.gene77481:CDS
GCTAGGATTGATAAAGAATT+TGG 0.238807 3.2:+72133203 MS.gene77481:CDS
CTCTCAGCAGGGTTGTTATA+AGG 0.249237 3.2:-72132852 None:intergenic
CAAACTCGTATAAAATAATT+CGG 0.271674 3.2:-72133036 None:intergenic
TTCTGCTTCAATTGATTCCT+TGG 0.285857 3.2:-72132880 None:intergenic
GTTCACCTTGCTCCTGATCT+TGG 0.289171 3.2:+72132564 MS.gene77481:CDS
GAGATAGCATAAGAAGCTTT+TGG 0.290608 3.2:-72132512 None:intergenic
TCTCTCTCTTCTCATTCTCT+TGG 0.292427 3.2:-72133174 None:intergenic
TTGTTATAAGGGCACACTTC+TGG 0.313439 3.2:-72132840 None:intergenic
TAACAACCCTGCTGAGAGTT+TGG 0.314464 3.2:+72132857 MS.gene77481:CDS
TGATGCTGCTATGGGGCATT+TGG 0.324908 3.2:+72135037 MS.gene77481:CDS
TCATTCCTCTCAATTTATTT+GGG 0.340961 3.2:-72133001 None:intergenic
ACCCATTTCAGAAAGGAGTT+TGG 0.341767 3.2:+72132975 MS.gene77481:CDS
GTCCATCCATTTATCTTGTA+AGG 0.345869 3.2:-72133138 None:intergenic
CAGAGATATTTCAATATTGC+AGG 0.351854 3.2:+72134961 MS.gene77481:CDS
TTCCGTGTGATTTGAGTATT+CGG 0.352742 3.2:+72134893 MS.gene77481:CDS
GTCCAAACTCCTTTCTGAAA+TGG 0.358720 3.2:-72132977 None:intergenic
CGGTGCTTATGTGTTCTTGA+TGG 0.364236 3.2:+72135117 MS.gene77481:CDS
CTGGATGGTCATTGCACAAC+CGG 0.365261 3.2:-72132608 None:intergenic
GCAAGAGGGCGATTGGAATA+TGG 0.366919 3.2:+72134711 MS.gene77481:CDS
CATCATGTACCTTGCCCATC+AGG 0.370150 3.2:+72134823 MS.gene77481:CDS
ATCGTCTATTTCAACAGTAT+TGG 0.374767 3.2:+72132479 MS.gene77481:CDS
TTCAAAGATGATTATGATGA+TGG 0.377284 3.2:+72133338 MS.gene77481:CDS
ACTGCAAGTGCGGCTGCAGC+TGG 0.378235 3.2:-72132438 None:intergenic
CACAACCGGGATCTAAAATT+AGG 0.378289 3.2:-72132594 None:intergenic
TTAATCGGAAGAAAATGTTT+TGG 0.380320 3.2:-72132252 None:intergenic
TTGAGAGGTGTGGGTGGCCA+TGG 0.383690 3.2:-72132375 None:intergenic
GCTGTTATAAGAGAGGTTCT+TGG 0.393796 3.2:+72132915 MS.gene77481:CDS
TCTCAGCAGGGTTGTTATAA+GGG 0.401018 3.2:-72132851 None:intergenic
TCCAAACTCCTTTCTGAAAT+GGG 0.403617 3.2:-72132976 None:intergenic
CTCGACTCATGATGCTGCTA+TGG 0.407062 3.2:+72135028 MS.gene77481:CDS
GATTTGTTTGACAACAAGAT+TGG 0.413459 3.2:+72133419 MS.gene77481:CDS
AAACTCGTATAAAATAATTC+GGG 0.414063 3.2:-72133035 None:intergenic
TCAATGATCTTGAATTTGTC+TGG 0.419429 3.2:-72132627 None:intergenic
CTCAATTGTTTGAACTTCAA+AGG 0.419774 3.2:-72132753 None:intergenic
TTAAAATTCTGTCCAAATGT+AGG 0.422916 3.2:+72132271 MS.gene77481:CDS
GGGACTGTGTCATGCTGTGC+AGG 0.426605 3.2:+72134930 MS.gene77481:CDS
CGGAGGCGGAGGAGAGCGTT+TGG 0.431313 3.2:+72134860 MS.gene77481:CDS
TCCTTGGCCAAACTCTCAGC+AGG 0.434855 3.2:-72132864 None:intergenic
TGAAAGATAAGCCCTACATT+TGG 0.441339 3.2:-72132283 None:intergenic
TGTGTCATGCTGTGCAGGGC+AGG 0.442272 3.2:+72134935 MS.gene77481:CDS
CCTTTCTTAGTCAGCAATAA+CGG 0.444662 3.2:+72132012 MS.gene77481:CDS
TCTCATCAAATCGCTCTACT+AGG 0.444788 3.2:-72133082 None:intergenic
CAACTATTAAATCAAGAGAA+TGG 0.444997 3.2:-72132725 None:intergenic
TGGGACTCACGCGGAGGTAA+AGG 0.457292 3.2:-72132705 None:intergenic
GAAGAGAGAGAAGGAAGGCT+AGG 0.457822 3.2:+72133186 MS.gene77481:CDS
AACTATTAAATCAAGAGAAT+GGG 0.459579 3.2:-72132724 None:intergenic
CCAACTTTGCCAGTAGTAAC+CGG 0.459749 3.2:-72132542 None:intergenic
TTGTCATGAGGAACAGAATC+CGG 0.464090 3.2:+72132193 MS.gene77481:CDS
TAAAATTCTGTCCAAATGTA+GGG 0.464670 3.2:+72132272 MS.gene77481:CDS
TGAGGATATATTTGAAGACT+TGG 0.466248 3.2:+72133364 MS.gene77481:CDS
TCGACTCATGATGCTGCTAT+GGG 0.466432 3.2:+72135029 MS.gene77481:CDS
CGCGTTATGCACGGAGGCGG+AGG 0.467096 3.2:+72134849 MS.gene77481:CDS
TAATTTAAAGAGGCCTCACC+GGG 0.468128 3.2:+72132791 MS.gene77481:CDS
GTGGAACTGAGGGAATTTAC+CGG 0.468878 3.2:-72132036 None:intergenic
GAAAGGGGCTTAATTTAAAG+AGG 0.470084 3.2:+72132781 MS.gene77481:CDS
GTGCATAACGCGCAACCTGA+TGG 0.471632 3.2:-72134838 None:intergenic
AAGATCATTGACACTTCCTA+TGG 0.476208 3.2:+72132639 MS.gene77481:CDS
TTCGCGACCGCACTCTTGAC+AGG 0.476319 3.2:+72132166 MS.gene77481:CDS
AGTTTCAGCAAGAGGGCGAT+TGG 0.476891 3.2:+72134704 MS.gene77481:CDS
ATAATCAATATCACTGTCAT+CGG 0.482631 3.2:-72133252 None:intergenic
TCCTCACCGCCGGTTACTAC+TGG 0.486639 3.2:+72132533 MS.gene77481:CDS
TTAATTTAAAGAGGCCTCAC+CGG 0.489651 3.2:+72132790 MS.gene77481:CDS
TATGGGGCATTTGGCACAAT+CGG 0.490523 3.2:+72135046 MS.gene77481:CDS
GATTGATGAGGAGATTTATG+TGG 0.492788 3.2:+72134671 MS.gene77481:CDS
TTTGAAAGGGCAAAGGGACT+CGG 0.493718 3.2:+72133055 MS.gene77481:CDS
TGCAGCCGCACTTGCAGTTG+AGG 0.498535 3.2:+72132443 MS.gene77481:CDS
TACGAGTTTGAAAGGGCAAA+GGG 0.499162 3.2:+72133049 MS.gene77481:CDS
TTGGAATGACAATTGAAAAG+AGG 0.501920 3.2:+72132934 MS.gene77481:CDS
CCGTTATTGCTGACTAAGAA+AGG 0.503193 3.2:-72132012 None:intergenic
AAGCTCAAGTGCACGTCCAT+AGG 0.503889 3.2:-72132655 None:intergenic
TAACTTATTGGAGAAGGATG+AGG 0.511987 3.2:+72133109 MS.gene77481:CDS
TGCATAACGCGCAACCTGAT+GGG 0.513229 3.2:-72134837 None:intergenic
CCGGTTACTACTGGCAAAGT+TGG 0.519367 3.2:+72132542 MS.gene77481:CDS
GGATTGATAAAGAATTTGGC+AGG 0.519833 3.2:+72133207 MS.gene77481:CDS
TTGAATTGTTTACTATCCCA+TGG 0.520794 3.2:+72132358 MS.gene77481:CDS
TGTCAAACAAATCGTTTCCC+AGG 0.524973 3.2:-72133409 None:intergenic
ATTGTTTGAACTTCAAAGGT+CGG 0.526316 3.2:-72132749 None:intergenic
GAAGCTGAGGATTATGACCT+GGG 0.526953 3.2:+72133392 MS.gene77481:CDS
TTAGGAGGAAGACCAAGATC+AGG 0.528609 3.2:-72132576 None:intergenic
TGAGAGGTGTGGGTGGCCAT+GGG 0.529539 3.2:-72132374 None:intergenic
TGAAGCTGAGGATTATGACC+TGG 0.537130 3.2:+72133391 MS.gene77481:CDS
AGATAGCAGTGGAATATACT+TGG 0.537923 3.2:+72134633 MS.gene77481:intron
ATCAGGTTGCGCGTTATGCA+CGG 0.540186 3.2:+72134840 MS.gene77481:CDS
ATTCGGCGTTGGCAAGAAGC+GGG 0.542612 3.2:+72134910 MS.gene77481:CDS
ACAAGATAAATGGATGGACT+TGG 0.544745 3.2:+72133142 MS.gene77481:CDS
TAATCAATATCACTGTCATC+GGG 0.545096 3.2:-72133251 None:intergenic
TGTTGTTCCACGAAGAAAAG+TGG 0.545285 3.2:-72132055 None:intergenic
ATACGAGTTTGAAAGGGCAA+AGG 0.549737 3.2:+72133048 MS.gene77481:CDS
CTTATGTGTTCTTGATGGAG+TGG 0.550807 3.2:+72135122 MS.gene77481:CDS
TGTATCGTGCGATACCAACT+TGG 0.550835 3.2:+72132677 MS.gene77481:CDS
TCGATGGATCATAGACAGTA+AGG 0.551421 3.2:-72132322 None:intergenic
AGGTAAAGGCTTTGCCAAGT+TGG 0.553621 3.2:-72132691 None:intergenic
TTGCGCGTTATGCACGGAGG+CGG 0.555190 3.2:+72134846 MS.gene77481:CDS
GAAGGGTAACTTATTGGAGA+AGG 0.555429 3.2:+72133103 MS.gene77481:CDS
TTATGCTATCTCCTCACCGC+CGG 0.555653 3.2:+72132523 MS.gene77481:CDS
GTGATTTGAGTATTCGGCGT+TGG 0.558496 3.2:+72134899 MS.gene77481:CDS
CCACTTGACCCATTTCAGAA+AGG 0.560006 3.2:+72132968 MS.gene77481:CDS
AAACAATTGAGACTTCGAAA+GGG 0.564618 3.2:+72132765 MS.gene77481:CDS
CAAACAATTGAGACTTCGAA+AGG 0.569475 3.2:+72132764 MS.gene77481:CDS
AATGAGAAGAGAGAGAAGGA+AGG 0.573040 3.2:+72133181 MS.gene77481:CDS
CTTCTCTCGAGCATATATCA+AGG 0.573261 3.2:-72134990 None:intergenic
CTTAGTTGCGTTGAGAGGTG+TGG 0.573460 3.2:-72132385 None:intergenic
CCTTTCTGAAATGGGTCAAG+TGG 0.574688 3.2:-72132968 None:intergenic
TGATCTTGAATTTGTCTGGA+TGG 0.575399 3.2:-72132623 None:intergenic
CAAACTTTAGCAAGTAATCC+CGG 0.575661 3.2:-72132809 None:intergenic
GGACTCCCAAATAAATTGAG+AGG 0.578071 3.2:+72132996 MS.gene77481:CDS
CAATTCCTCAACTGCAAGTG+CGG 0.581658 3.2:-72132448 None:intergenic
AGTAGAGCGATTTGATGAGA+AGG 0.582051 3.2:+72133085 MS.gene77481:CDS
TGAAGAGAAGTTTCAGCAAG+AGG 0.582069 3.2:+72134696 MS.gene77481:CDS
CCCTGCTGAGAGTTTGGCCA+AGG 0.582438 3.2:+72132863 MS.gene77481:CDS
AACAATTGAGACTTCGAAAG+GGG 0.584929 3.2:+72132766 MS.gene77481:CDS
TATAACTTAGTTGCGTTGAG+AGG 0.585447 3.2:-72132390 None:intergenic
CTTAGTCAGCAATAACGGAC+CGG 0.589570 3.2:+72132017 MS.gene77481:CDS
AATCTGCTGTGCATCTGTGA+TGG 0.590014 3.2:-72135089 None:intergenic
GCACAAGACGTGCATCATAG+AGG 0.593683 3.2:+72135151 MS.gene77481:CDS
ATAAATGGATGGACTTGGCG+AGG 0.596180 3.2:+72133147 MS.gene77481:CDS
TGGATGGTCATTGCACAACC+GGG 0.597590 3.2:-72132607 None:intergenic
AGCCTTACAAGATAAATGGA+TGG 0.598756 3.2:+72133136 MS.gene77481:CDS
TTAGTTGCGTTGAGAGGTGT+GGG 0.602056 3.2:-72132384 None:intergenic
GAAGAGAAGTTTCAGCAAGA+GGG 0.605360 3.2:+72134697 MS.gene77481:CDS
ACGAAGAAAAGTGGAACTGA+GGG 0.606364 3.2:-72132046 None:intergenic
TATTCGGCGTTGGCAAGAAG+CGG 0.608181 3.2:+72134909 MS.gene77481:CDS
GAAGACCAAGATCAGGAGCA+AGG 0.612166 3.2:-72132569 None:intergenic
ATGTTGTGCTGTTATAAGAG+AGG 0.617545 3.2:+72132908 MS.gene77481:CDS
AACCGGGATCTAAAATTAGG+AGG 0.618298 3.2:-72132591 None:intergenic
TATTGCTGACTAAGAAAGGA+TGG 0.618511 3.2:-72132008 None:intergenic
AATCAGCTTATAGATTGATG+AGG 0.619737 3.2:+72134659 MS.gene77481:CDS
AATTGAGAGGAATGATTGTG+AGG 0.622196 3.2:+72133009 MS.gene77481:CDS
CACGAAGAAAAGTGGAACTG+AGG 0.624701 3.2:-72132047 None:intergenic
TAAATGGATGGACTTGGCGA+GGG 0.625962 3.2:+72133148 MS.gene77481:CDS
GTAGAGCGATTTGATGAGAA+GGG 0.626749 3.2:+72133086 MS.gene77481:CDS
GCCAGTAGTAACCGGCGGTG+AGG 0.629295 3.2:-72132534 None:intergenic
GGACTGTGTCATGCTGTGCA+GGG 0.629573 3.2:+72134931 MS.gene77481:CDS
CTCGAGAGAAGTTGTTGATG+TGG 0.630742 3.2:+72135002 MS.gene77481:CDS
ATAGAGAACAGAAGCAACCC+TGG 0.633738 3.2:+72133486 MS.gene77481:CDS
GATGCACAGCAGATTTGCAT+CGG 0.637483 3.2:+72135097 MS.gene77481:CDS
GTCAAACGAACACATAGTTG+AGG 0.640241 3.2:-72132414 None:intergenic
AGAGAATGAGAAGAGAGAGA+AGG 0.640932 3.2:+72133177 MS.gene77481:CDS
CGCCGAATACTCAAATCACA+CGG 0.643936 3.2:-72134895 None:intergenic
CGACTCATGATGCTGCTATG+GGG 0.649833 3.2:+72135030 MS.gene77481:CDS
CCTTGGCCAAACTCTCAGCA+GGG 0.650031 3.2:-72132863 None:intergenic
AACTCGTATAAAATAATTCG+GGG 0.651846 3.2:-72133034 None:intergenic
AACGCGCAACCTGATGGGCA+AGG 0.657247 3.2:-72134832 None:intergenic
ACAATCGGAATGATCAAGTG+TGG 0.673503 3.2:+72135061 MS.gene77481:CDS
TTGACAGGCATGTTGTCATG+AGG 0.677083 3.2:+72132181 MS.gene77481:CDS
GTTGCGTTGAGAGGTGTGGG+TGG 0.687295 3.2:-72132381 None:intergenic
TCAAGAGAATGGGACTCACG+CGG 0.693646 3.2:-72132714 None:intergenic
CAACATGCCTGTCAAGAGTG+CGG 0.698613 3.2:-72132173 None:intergenic
AGAGAATGGGACTCACGCGG+AGG 0.722473 3.2:-72132711 None:intergenic
TTTAGCAAGTAATCCCGGTG+AGG 0.724164 3.2:-72132804 None:intergenic
ATCATAGACAGTAAGGAACG+AGG 0.740778 3.2:-72132315 None:intergenic
AGGTTGCGCGTTATGCACGG+AGG 0.766159 3.2:+72134843 MS.gene77481:CDS
ACTTTGCCAGTAGTAACCGG+CGG 0.778731 3.2:-72132539 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCAATGTATTTTTTTTA+TGG + chr3.2:72133809-72133828 MS.gene77481:intron 10.0%
!! CTGAGTTATAAATAAAAAAA+GGG - chr3.2:72134005-72134024 None:intergenic 15.0%
!! AAACTCGTATAAAATAATTC+GGG - chr3.2:72133038-72133057 None:intergenic 20.0%
!! AACTATTAAATCAAGAGAAT+GGG - chr3.2:72132727-72132746 None:intergenic 20.0%
!! ATAGAAATACACATATCAAA+AGG + chr3.2:72133877-72133896 MS.gene77481:intron 20.0%
!! ATTTCTTGATTATGAAATGA+AGG - chr3.2:72134461-72134480 None:intergenic 20.0%
!! CAAACTCGTATAAAATAATT+CGG - chr3.2:72133039-72133058 None:intergenic 20.0%
!! GATAGTAAACAATTCAAAAA+TGG - chr3.2:72132355-72132374 None:intergenic 20.0%
!! GCTGAGTTATAAATAAAAAA+AGG - chr3.2:72134006-72134025 None:intergenic 20.0%
!!! AATTTTCATACGTTAAGTAA+AGG + chr3.2:72133531-72133550 MS.gene77481:intron 20.0%
!!! ATTAGTCTCTAAAATTCTTA+AGG + chr3.2:72134338-72134357 MS.gene77481:intron 20.0%
!!! ATTTTAGAGACTAATTTATC+CGG - chr3.2:72134333-72134352 None:intergenic 20.0%
!!! TATTTTATACGAGTTTGAAA+GGG + chr3.2:72133042-72133061 MS.gene77481:CDS 20.0%
!!! TTATTTTATACGAGTTTGAA+AGG + chr3.2:72133041-72133060 MS.gene77481:CDS 20.0%
!!! TTGAAACAGATAGATTTTTA+AGG - chr3.2:72132122-72132141 None:intergenic 20.0%
!!! TTTTTAAGGTTACATGTTTT+TGG - chr3.2:72132108-72132127 None:intergenic 20.0%
! AACTCGTATAAAATAATTCG+GGG - chr3.2:72133037-72133056 None:intergenic 25.0%
! AATGCAAAATTGCTCTATTT+AGG + chr3.2:72133941-72133960 MS.gene77481:intron 25.0%
! ACCAGTAAATCAAAATCATT+AGG - chr3.2:72134604-72134623 None:intergenic 25.0%
! ATAATCAATATCACTGTCAT+CGG - chr3.2:72133255-72133274 None:intergenic 25.0%
! ATCATTCCTCTCAATTTATT+TGG - chr3.2:72133005-72133024 None:intergenic 25.0%
! ATTTATAACTCAGCATATAC+AGG + chr3.2:72134012-72134031 MS.gene77481:intron 25.0%
! CAACTATTAAATCAAGAGAA+TGG - chr3.2:72132728-72132747 None:intergenic 25.0%
! CACCAACATAGATAAATTAA+AGG - chr3.2:72134283-72134302 None:intergenic 25.0%
! CAGTAAATCAAAATCATTAG+GGG - chr3.2:72134602-72134621 None:intergenic 25.0%
! CCAGTAAATCAAAATCATTA+GGG - chr3.2:72134603-72134622 None:intergenic 25.0%
! GTAAACAATTCAAAAATGGA+TGG - chr3.2:72132351-72132370 None:intergenic 25.0%
! GTACCATATTATGATTATGA+TGG + chr3.2:72133597-72133616 MS.gene77481:intron 25.0%
! TAAAATTCTGTCCAAATGTA+GGG + chr3.2:72132272-72132291 MS.gene77481:CDS 25.0%
! TCATTCCTCTCAATTTATTT+GGG - chr3.2:72133004-72133023 None:intergenic 25.0%
! TCTCCATCATAATCATAATA+TGG - chr3.2:72133603-72133622 None:intergenic 25.0%
! TGAATAAAAAGTTGAAGTCT+TGG - chr3.2:72134210-72134229 None:intergenic 25.0%
! TTAAAATTCTGTCCAAATGT+AGG + chr3.2:72132271-72132290 MS.gene77481:CDS 25.0%
! TTCAAAGATGATTATGATGA+TGG + chr3.2:72133299-72133318 MS.gene77481:CDS 25.0%
! TTTGTACTTGTACATATTGA+AGG + chr3.2:72133725-72133744 MS.gene77481:intron 25.0%
!! AAATGTTTCTGTTTCTTCTA+TGG + chr3.2:72134239-72134258 MS.gene77481:intron 25.0%
!! AATGTTTCTGTTTCTTCTAT+GGG + chr3.2:72134240-72134259 MS.gene77481:intron 25.0%
!! AGCCTTTAATTTATCTATGT+TGG + chr3.2:72134278-72134297 MS.gene77481:intron 25.0%
!! GAAACAGAGAATAATTTTGT+TGG - chr3.2:72134537-72134556 None:intergenic 25.0%
!! GATAGCAATTAATTGTCTTT+TGG + chr3.2:72133759-72133778 MS.gene77481:intron 25.0%
!! TAAATAGAGCAATTTTGCAT+TGG - chr3.2:72133942-72133961 None:intergenic 25.0%
!! TATCTATGTTGGTGAAATAA+GGG + chr3.2:72134289-72134308 MS.gene77481:intron 25.0%
!! TCAACTTTTTATTCAAACCA+TGG + chr3.2:72134215-72134234 MS.gene77481:intron 25.0%
!! TTAATCGGAAGAAAATGTTT+TGG - chr3.2:72132255-72132274 None:intergenic 25.0%
!! TTATCTATGTTGGTGAAATA+AGG + chr3.2:72134288-72134307 MS.gene77481:intron 25.0%
!!! ATGATTTTGATTTACTGGTT+TGG + chr3.2:72134605-72134624 MS.gene77481:intron 25.0%
!!! CATTTGGACAGAATTTTAAT+CGG - chr3.2:72132270-72132289 None:intergenic 25.0%
!!! TTTTAGCCTTACAAGATAAA+TGG + chr3.2:72133132-72133151 MS.gene77481:CDS 25.0%
AAACAATTGAGACTTCGAAA+GGG + chr3.2:72132765-72132784 MS.gene77481:CDS 30.0%
AATCAGCTTATAGATTGATG+AGG + chr3.2:72134659-72134678 MS.gene77481:CDS 30.0%
AATCATAATATGGTACATGC+AGG - chr3.2:72133593-72133612 None:intergenic 30.0%
ATCGTCTATTTCAACAGTAT+TGG + chr3.2:72132479-72132498 MS.gene77481:CDS 30.0%
ATTGTTTGAACTTCAAAGGT+CGG - chr3.2:72132752-72132771 None:intergenic 30.0%
CAGAGATATTTCAATATTGC+AGG + chr3.2:72134961-72134980 MS.gene77481:CDS 30.0%
CTATTCACAGAAAAAGATGA+AGG - chr3.2:72132081-72132100 None:intergenic 30.0%
CTCAATTGTTTGAACTTCAA+AGG - chr3.2:72132756-72132775 None:intergenic 30.0%
CTTAACTTTGACAATTACCA+GGG - chr3.2:72133506-72133525 None:intergenic 30.0%
GCTAGGATTGATAAAGAATT+TGG + chr3.2:72133203-72133222 MS.gene77481:CDS 30.0%
TAATCAATATCACTGTCATC+GGG - chr3.2:72133254-72133273 None:intergenic 30.0%
TCAATGATCTTGAATTTGTC+TGG - chr3.2:72132630-72132649 None:intergenic 30.0%
TCTTAACTTTGACAATTACC+AGG - chr3.2:72133507-72133526 None:intergenic 30.0%
TGAGGATATATTTGAAGACT+TGG + chr3.2:72133364-72133383 MS.gene77481:CDS 30.0%
TTATTCTCTGTTTCATCCTT+TGG + chr3.2:72134543-72134562 MS.gene77481:intron 30.0%
TTCATACGTTAAGTAAAGGT+TGG + chr3.2:72133535-72133554 MS.gene77481:intron 30.0%
TTGAATTGTTTACTATCCCA+TGG + chr3.2:72132358-72132377 MS.gene77481:CDS 30.0%
TTGGAATGACAATTGAAAAG+AGG + chr3.2:72132934-72132953 MS.gene77481:CDS 30.0%
TTGGTTTAGAGAATTAGTAG+AGG + chr3.2:72134769-72134788 MS.gene77481:intron 30.0%
! ACAACAAGATTGGAGAATTT+TGG + chr3.2:72133429-72133448 MS.gene77481:CDS 30.0%
! CAAACTACTCATTTGTTGAA+CGG + chr3.2:72134373-72134392 MS.gene77481:intron 30.0%
! GAATTTTTGATCTGGCAAAA+GGG + chr3.2:72133561-72133580 MS.gene77481:intron 30.0%
! GATTTGTTTGACAACAAGAT+TGG + chr3.2:72133419-72133438 MS.gene77481:CDS 30.0%
! GTTGGAATGAATTTTTGATC+TGG + chr3.2:72133553-72133572 MS.gene77481:intron 30.0%
! TGAATTTTTGATCTGGCAAA+AGG + chr3.2:72133560-72133579 MS.gene77481:intron 30.0%
! TTTTCAGCTTTTGAACAAAC+CGG - chr3.2:72132215-72132234 None:intergenic 30.0%
! TTTTCCGATTCAAAATGGTT+CGG + chr3.2:72133463-72133482 MS.gene77481:CDS 30.0%
!! TCTCTAAAATTCTTAAGGCT+AGG + chr3.2:72134343-72134362 MS.gene77481:intron 30.0%
!!! AGGTACCGAATGAATATTTT+TGG - chr3.2:72134572-72134591 None:intergenic 30.0%
!!! CCCTAATGATTTTGATTTAC+TGG + chr3.2:72134600-72134619 MS.gene77481:intron 30.0%
!!! TGATTATGATGATGGTTTTG+AGG + chr3.2:72133346-72133365 MS.gene77481:CDS 30.0%
AAATCATTAGGGGATAACAG+AGG - chr3.2:72134592-72134611 None:intergenic 35.0%
AACAATTGAGACTTCGAAAG+GGG + chr3.2:72132766-72132785 MS.gene77481:CDS 35.0%
AAGATCATTGACACTTCCTA+TGG + chr3.2:72132639-72132658 MS.gene77481:CDS 35.0%
AATTAATTGCTATCGAGTGG+TGG - chr3.2:72133753-72133772 None:intergenic 35.0%
AATTGAGAGGAATGATTGTG+AGG + chr3.2:72133009-72133028 MS.gene77481:CDS 35.0%
ACCAAATTCCTAACCTTTGA+CGG - chr3.2:72134754-72134773 None:intergenic 35.0%
AGAAACAGAAACATTTGCCA+TGG - chr3.2:72134235-72134254 None:intergenic 35.0%
AGATAGCAGTGGAATATACT+TGG + chr3.2:72134633-72134652 MS.gene77481:intron 35.0%
AGCCTTACAAGATAAATGGA+TGG + chr3.2:72133136-72133155 MS.gene77481:CDS 35.0%
CAAAAATGGATGGATATCGA+TGG - chr3.2:72132341-72132360 None:intergenic 35.0%
CAAACAATTGAGACTTCGAA+AGG + chr3.2:72132764-72132783 MS.gene77481:CDS 35.0%
CAAACTTTAGCAAGTAATCC+CGG - chr3.2:72132812-72132831 None:intergenic 35.0%
CCTTTCTTAGTCAGCAATAA+CGG + chr3.2:72132012-72132031 MS.gene77481:CDS 35.0%
CGTTCAACAAATGAGTAGTT+TGG - chr3.2:72134375-72134394 None:intergenic 35.0%
GAAAGGGGCTTAATTTAAAG+AGG + chr3.2:72132781-72132800 MS.gene77481:CDS 35.0%
GACAATTAATTGCTATCGAG+TGG - chr3.2:72133756-72133775 None:intergenic 35.0%
GATTGATGAGGAGATTTATG+TGG + chr3.2:72134671-72134690 MS.gene77481:CDS 35.0%
GGATTGATAAAGAATTTGGC+AGG + chr3.2:72133207-72133226 MS.gene77481:CDS 35.0%
GGTGGCCAAAAATATTCATT+CGG + chr3.2:72134564-72134583 MS.gene77481:intron 35.0%
GTAAAAGTGAGAAAGTTCAG+AGG + chr3.2:72133700-72133719 MS.gene77481:intron 35.0%
GTCCATCCATTTATCTTGTA+AGG - chr3.2:72133141-72133160 None:intergenic 35.0%
TAACTTATTGGAGAAGGATG+AGG + chr3.2:72133109-72133128 MS.gene77481:CDS 35.0%
TAAGTTGTGACTCTTGCATT+AGG + chr3.2:72134052-72134071 MS.gene77481:intron 35.0%
TATAACTTAGTTGCGTTGAG+AGG - chr3.2:72132393-72132412 None:intergenic 35.0%
TATCTTAACATGTGCCTTGA+GGG - chr3.2:72133851-72133870 None:intergenic 35.0%
TATGAAGGATCCATGGTTAA+GGG + chr3.2:72134411-72134430 MS.gene77481:intron 35.0%
TATGCATGTGAGTGATCTAA+TGG + chr3.2:72134487-72134506 MS.gene77481:intron 35.0%
TATGTCGGTCAAAGTTATGA+AGG + chr3.2:72134396-72134415 MS.gene77481:intron 35.0%
TCAAAGTTATGAAGGATCCA+TGG + chr3.2:72134404-72134423 MS.gene77481:intron 35.0%
TCATTAAGCTTCTTCTGCAT+CGG - chr3.2:72134802-72134821 None:intergenic 35.0%
TGAAAGATAAGCCCTACATT+TGG - chr3.2:72132286-72132305 None:intergenic 35.0%
TGATCTTGAATTTGTCTGGA+TGG - chr3.2:72132626-72132645 None:intergenic 35.0%
TGATGAGAAGGGTAACTTAT+TGG + chr3.2:72133097-72133116 MS.gene77481:CDS 35.0%
TTAATTTAAAGAGGCCTCAC+CGG + chr3.2:72132790-72132809 MS.gene77481:CDS 35.0%
TTATGAAGGATCCATGGTTA+AGG + chr3.2:72134410-72134429 MS.gene77481:intron 35.0%
TTCCGTGTGATTTGAGTATT+CGG + chr3.2:72134893-72134912 MS.gene77481:CDS 35.0%
TTTATGGTCAGTCTATTCTG+TGG + chr3.2:72134138-72134157 MS.gene77481:intron 35.0%
! ACAAGATAAATGGATGGACT+TGG + chr3.2:72133142-72133161 MS.gene77481:CDS 35.0%
! ATGTTGTGCTGTTATAAGAG+AGG + chr3.2:72132908-72132927 MS.gene77481:CDS 35.0%
! CTATCCGAACCATTTTGAAT+CGG - chr3.2:72133470-72133489 None:intergenic 35.0%
! GAACCATTTTGAATCGGAAA+AGG - chr3.2:72133464-72133483 None:intergenic 35.0%
! GAGATAGCATAAGAAGCTTT+TGG - chr3.2:72132515-72132534 None:intergenic 35.0%
! TATTGCTGACTAAGAAAGGA+TGG - chr3.2:72132011-72132030 None:intergenic 35.0%
! TCATTTGTTGAACGGTATGT+CGG + chr3.2:72134381-72134400 MS.gene77481:intron 35.0%
! TTCCTCCTAATTTTAGATCC+CGG + chr3.2:72132589-72132608 MS.gene77481:CDS 35.0%
! TTCTGCTTCAATTGATTCCT+TGG - chr3.2:72132883-72132902 None:intergenic 35.0%
!! TCCAAACTCCTTTCTGAAAT+GGG - chr3.2:72132979-72132998 None:intergenic 35.0%
!!! TGAATATTTTTGGCCACCAA+AGG - chr3.2:72134562-72134581 None:intergenic 35.0%
!!! TGACTCGAACTGTTGTTTTA+TGG + chr3.2:72134122-72134141 MS.gene77481:intron 35.0%
AATGAGAAGAGAGAGAAGGA+AGG + chr3.2:72133181-72133200 MS.gene77481:CDS 40.0%
ACAATCGGAATGATCAAGTG+TGG + chr3.2:72135061-72135080 MS.gene77481:CDS 40.0%
ACCCATTTCAGAAAGGAGTT+TGG + chr3.2:72132975-72132994 MS.gene77481:CDS 40.0%
ACGAAGAAAAGTGGAACTGA+GGG - chr3.2:72132049-72132068 None:intergenic 40.0%
AGAGAATGAGAAGAGAGAGA+AGG + chr3.2:72133177-72133196 MS.gene77481:CDS 40.0%
AGTAGAGCGATTTGATGAGA+AGG + chr3.2:72133085-72133104 MS.gene77481:CDS 40.0%
ATAATATGGTACATGCAGGC+TGG - chr3.2:72133589-72133608 None:intergenic 40.0%
ATACGAGTTTGAAAGGGCAA+AGG + chr3.2:72133048-72133067 MS.gene77481:CDS 40.0%
ATCATAGACAGTAAGGAACG+AGG - chr3.2:72132318-72132337 None:intergenic 40.0%
ATCATCAAGAGGAGAAAAGG+AGG - chr3.2:72134092-72134111 None:intergenic 40.0%
ATGGAGATATTGCTCTATGC+TGG + chr3.2:72133616-72133635 MS.gene77481:intron 40.0%
CCAAATTCCTAACCTTTGAC+GGG - chr3.2:72134753-72134772 None:intergenic 40.0%
CTTATGTGTTCTTGATGGAG+TGG + chr3.2:72135122-72135141 MS.gene77481:CDS 40.0%
CTTCTCTCGAGCATATATCA+AGG - chr3.2:72134993-72135012 None:intergenic 40.0%
CTTGCATTAGGCTTATCTAC+AGG + chr3.2:72134064-72134083 MS.gene77481:intron 40.0%
GAAGAGAAGTTTCAGCAAGA+GGG + chr3.2:72134697-72134716 MS.gene77481:CDS 40.0%
GAAGGGTAACTTATTGGAGA+AGG + chr3.2:72133103-72133122 MS.gene77481:CDS 40.0%
GCTGTTATAAGAGAGGTTCT+TGG + chr3.2:72132915-72132934 MS.gene77481:CDS 40.0%
GGACTCCCAAATAAATTGAG+AGG + chr3.2:72132996-72133015 MS.gene77481:CDS 40.0%
GTAGAGCGATTTGATGAGAA+GGG + chr3.2:72133086-72133105 MS.gene77481:CDS 40.0%
GTATCTTAACATGTGCCTTG+AGG - chr3.2:72133852-72133871 None:intergenic 40.0%
GTCAAACGAACACATAGTTG+AGG - chr3.2:72132417-72132436 None:intergenic 40.0%
GTGAGTGATCTAATGGTTCA+AGG + chr3.2:72134494-72134513 MS.gene77481:intron 40.0%
TAATTTAAAGAGGCCTCACC+GGG + chr3.2:72132791-72132810 MS.gene77481:CDS 40.0%
TACGAGTTTGAAAGGGCAAA+GGG + chr3.2:72133049-72133068 MS.gene77481:CDS 40.0%
TCGATGGATCATAGACAGTA+AGG - chr3.2:72132325-72132344 None:intergenic 40.0%
TCTCAGCAGGGTTGTTATAA+GGG - chr3.2:72132854-72132873 None:intergenic 40.0%
TCTCATCAAATCGCTCTACT+AGG - chr3.2:72133085-72133104 None:intergenic 40.0%
TCTCTCTCTTCTCATTCTCT+TGG - chr3.2:72133177-72133196 None:intergenic 40.0%
TGAAGAGAAGTTTCAGCAAG+AGG + chr3.2:72134696-72134715 MS.gene77481:CDS 40.0%
TGCATCATCAAGAGGAGAAA+AGG - chr3.2:72134095-72134114 None:intergenic 40.0%
TGTCAAACAAATCGTTTCCC+AGG - chr3.2:72133412-72133431 None:intergenic 40.0%
TGTTGTTCCACGAAGAAAAG+TGG - chr3.2:72132058-72132077 None:intergenic 40.0%
TTCTCTGTTTCATCCTTTGG+TGG + chr3.2:72134546-72134565 MS.gene77481:intron 40.0%
TTGCTTAACATGTGCCCTAA+GGG + chr3.2:72133964-72133983 MS.gene77481:intron 40.0%
TTGTCATGAGGAACAGAATC+CGG + chr3.2:72132193-72132212 MS.gene77481:CDS 40.0%
! AACCGGGATCTAAAATTAGG+AGG - chr3.2:72132594-72132613 None:intergenic 40.0%
! ATTGGAGAATTTTGGACTGC+AGG + chr3.2:72133437-72133456 MS.gene77481:CDS 40.0%
! CACAACCGGGATCTAAAATT+AGG - chr3.2:72132597-72132616 None:intergenic 40.0%
! CCGTTATTGCTGACTAAGAA+AGG - chr3.2:72132015-72132034 None:intergenic 40.0%
! CTATGTTGGTGAAATAAGGG+TGG + chr3.2:72134292-72134311 MS.gene77481:intron 40.0%
! GGACCTTTTCCGATTCAAAA+TGG + chr3.2:72133458-72133477 MS.gene77481:CDS 40.0%
! GTCCAAACTCCTTTCTGAAA+TGG - chr3.2:72132980-72132999 None:intergenic 40.0%
! GTTTGGAATGAAGATAGCAG+TGG + chr3.2:72134622-72134641 MS.gene77481:intron 40.0%
! TTGTTATAAGGGCACACTTC+TGG - chr3.2:72132843-72132862 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr3.2:72133834-72133853 MS.gene77481:intron 40.0%
!! AGAAGCATTGCATCATCAAG+AGG - chr3.2:72134103-72134122 None:intergenic 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - chr3.2:72133981-72134000 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - chr3.2:72133982-72134001 None:intergenic 40.0%
!!! AGACTTGGATTTTGAAGCTG+AGG + chr3.2:72133379-72133398 MS.gene77481:CDS 40.0%
AATCTGCTGTGCATCTGTGA+TGG - chr3.2:72135092-72135111 None:intergenic 45.0%
AGGTAAAGGCTTTGCCAAGT+TGG - chr3.2:72132694-72132713 None:intergenic 45.0%
ATAGAGAACAGAAGCAACCC+TGG + chr3.2:72133486-72133505 MS.gene77481:CDS 45.0%
CAATTCCTCAACTGCAAGTG+CGG - chr3.2:72132451-72132470 None:intergenic 45.0%
CACGAAGAAAAGTGGAACTG+AGG - chr3.2:72132050-72132069 None:intergenic 45.0%
CCAACTTTGCCAGTAGTAAC+CGG - chr3.2:72132545-72132564 None:intergenic 45.0%
CCACTTGACCCATTTCAGAA+AGG + chr3.2:72132968-72132987 MS.gene77481:CDS 45.0%
CCCGTCAAAGGTTAGGAATT+TGG + chr3.2:72134750-72134769 MS.gene77481:intron 45.0%
CGCCGAATACTCAAATCACA+CGG - chr3.2:72134898-72134917 None:intergenic 45.0%
CGGTGCTTATGTGTTCTTGA+TGG + chr3.2:72135117-72135136 MS.gene77481:CDS 45.0%
CTCGAGAGAAGTTGTTGATG+TGG + chr3.2:72135002-72135021 MS.gene77481:CDS 45.0%
CTCTCAGCAGGGTTGTTATA+AGG - chr3.2:72132855-72132874 None:intergenic 45.0%
GAAGCTGAGGATTATGACCT+GGG + chr3.2:72133392-72133411 MS.gene77481:CDS 45.0%
GAATGTGAATGTCCCGTCAA+AGG + chr3.2:72134738-72134757 MS.gene77481:intron 45.0%
GATCTAATGGTTCAAGGCCA+AGG + chr3.2:72134500-72134519 MS.gene77481:intron 45.0%
GATGCACAGCAGATTTGCAT+CGG + chr3.2:72135097-72135116 MS.gene77481:CDS 45.0%
GTGATTTGAGTATTCGGCGT+TGG + chr3.2:72134899-72134918 MS.gene77481:CDS 45.0%
GTGGAACTGAGGGAATTTAC+CGG - chr3.2:72132039-72132058 None:intergenic 45.0%
GTGGAATATCATGAGCAAGC+CGG + chr3.2:72134311-72134330 MS.gene77481:intron 45.0%
GTTGCTTAACATGTGCCCTA+AGG + chr3.2:72133963-72133982 MS.gene77481:intron 45.0%
TAACAACCCTGCTGAGAGTT+TGG + chr3.2:72132857-72132876 MS.gene77481:CDS 45.0%
TCGACTCATGATGCTGCTAT+GGG + chr3.2:72135029-72135048 MS.gene77481:CDS 45.0%
TGAAGCTGAGGATTATGACC+TGG + chr3.2:72133391-72133410 MS.gene77481:CDS 45.0%
TGAATGTCCCGTCAAAGGTT+AGG + chr3.2:72134743-72134762 MS.gene77481:intron 45.0%
TGTATCGTGCGATACCAACT+TGG + chr3.2:72132677-72132696 MS.gene77481:CDS 45.0%
TTAGGAGGAAGACCAAGATC+AGG - chr3.2:72132579-72132598 None:intergenic 45.0%
TTGACAGGCATGTTGTCATG+AGG + chr3.2:72132181-72132200 MS.gene77481:CDS 45.0%
TTTAGCAAGTAATCCCGGTG+AGG - chr3.2:72132807-72132826 None:intergenic 45.0%
TTTGAAAGGGCAAAGGGACT+CGG + chr3.2:72133055-72133074 MS.gene77481:CDS 45.0%
! ATAAATGGATGGACTTGGCG+AGG + chr3.2:72133147-72133166 MS.gene77481:CDS 45.0%
! TAAATGGATGGACTTGGCGA+GGG + chr3.2:72133148-72133167 MS.gene77481:CDS 45.0%
! TATGGGGCATTTGGCACAAT+CGG + chr3.2:72135046-72135065 MS.gene77481:CDS 45.0%
! TTAGTTGCGTTGAGAGGTGT+GGG - chr3.2:72132387-72132406 None:intergenic 45.0%
!! CCTTTCTGAAATGGGTCAAG+TGG - chr3.2:72132971-72132990 None:intergenic 45.0%
!! CTCAGTTCCACTTTTCTTCG+TGG + chr3.2:72132048-72132067 MS.gene77481:CDS 45.0%
!! CTTAGTCAGCAATAACGGAC+CGG + chr3.2:72132017-72132036 MS.gene77481:CDS 45.0%
AAGCTCAAGTGCACGTCCAT+AGG - chr3.2:72132658-72132677 None:intergenic 50.0%
ACTTTGCCAGTAGTAACCGG+CGG - chr3.2:72132542-72132561 None:intergenic 50.0%
AGGGCGATTGGAATATGGTG+TGG + chr3.2:72134716-72134735 MS.gene77481:intron 50.0%
AGTTTCAGCAAGAGGGCGAT+TGG + chr3.2:72134704-72134723 MS.gene77481:CDS 50.0%
CAACATGCCTGTCAAGAGTG+CGG - chr3.2:72132176-72132195 None:intergenic 50.0%
CATCATGTACCTTGCCCATC+AGG + chr3.2:72134823-72134842 MS.gene77481:CDS 50.0%
CCGGTTACTACTGGCAAAGT+TGG + chr3.2:72132542-72132561 MS.gene77481:CDS 50.0%
CGACTCATGATGCTGCTATG+GGG + chr3.2:72135030-72135049 MS.gene77481:CDS 50.0%
CTCGACTCATGATGCTGCTA+TGG + chr3.2:72135028-72135047 MS.gene77481:CDS 50.0%
CTCTCATGCACCCTTAACCA+TGG - chr3.2:72134424-72134443 None:intergenic 50.0%
CTGGATGGTCATTGCACAAC+CGG - chr3.2:72132611-72132630 None:intergenic 50.0%
CTTAGTTGCGTTGAGAGGTG+TGG - chr3.2:72132388-72132407 None:intergenic 50.0%
GAAGACCAAGATCAGGAGCA+AGG - chr3.2:72132572-72132591 None:intergenic 50.0%
GAAGAGAGAGAAGGAAGGCT+AGG + chr3.2:72133186-72133205 MS.gene77481:CDS 50.0%
GCAAGAGGGCGATTGGAATA+TGG + chr3.2:72134711-72134730 MS.gene77481:CDS 50.0%
GGTGCATGAGAGTAGGTAGT+TGG + chr3.2:72134432-72134451 MS.gene77481:intron 50.0%
GTTCACCTTGCTCCTGATCT+TGG + chr3.2:72132564-72132583 MS.gene77481:CDS 50.0%
TCAAGAGAATGGGACTCACG+CGG - chr3.2:72132717-72132736 None:intergenic 50.0%
TGCATAACGCGCAACCTGAT+GGG - chr3.2:72134840-72134859 None:intergenic 50.0%
TGGATGGTCATTGCACAACC+GGG - chr3.2:72132610-72132629 None:intergenic 50.0%
TGTTGGCAACCCAAACACCT+TGG - chr3.2:72134520-72134539 None:intergenic 50.0%
TTATGCTATCTCCTCACCGC+CGG + chr3.2:72132523-72132542 MS.gene77481:CDS 50.0%
! ATCAGGTTGCGCGTTATGCA+CGG + chr3.2:72134840-72134859 MS.gene77481:CDS 50.0%
! GGTTAAGGGTGCATGAGAGT+AGG + chr3.2:72134425-72134444 MS.gene77481:intron 50.0%
! GGTTCAAGGCCAAGGTGTTT+GGG + chr3.2:72134508-72134527 MS.gene77481:intron 50.0%
! TGATGCTGCTATGGGGCATT+TGG + chr3.2:72135037-72135056 MS.gene77481:CDS 50.0%
! TGGTTCAAGGCCAAGGTGTT+TGG + chr3.2:72134507-72134526 MS.gene77481:intron 50.0%
!! TATTCGGCGTTGGCAAGAAG+CGG + chr3.2:72134909-72134928 MS.gene77481:CDS 50.0%
CCTTGGCCAAACTCTCAGCA+GGG - chr3.2:72132866-72132885 None:intergenic 55.0%
GGACTGTGTCATGCTGTGCA+GGG + chr3.2:72134931-72134950 MS.gene77481:CDS 55.0%
GTGCATAACGCGCAACCTGA+TGG - chr3.2:72134841-72134860 None:intergenic 55.0%
TCCTTGGCCAAACTCTCAGC+AGG - chr3.2:72132867-72132886 None:intergenic 55.0%
!! ATTCGGCGTTGGCAAGAAGC+GGG + chr3.2:72134910-72134929 MS.gene77481:CDS 55.0%
AGAGAATGGGACTCACGCGG+AGG - chr3.2:72132714-72132733 None:intergenic 60.0%
AGGTTGCGCGTTATGCACGG+AGG + chr3.2:72134843-72134862 MS.gene77481:CDS 60.0%
CCCTGCTGAGAGTTTGGCCA+AGG + chr3.2:72132863-72132882 MS.gene77481:CDS 60.0%
GGGACTGTGTCATGCTGTGC+AGG + chr3.2:72134930-72134949 MS.gene77481:CDS 60.0%
TGCAGCCGCACTTGCAGTTG+AGG + chr3.2:72132443-72132462 MS.gene77481:CDS 60.0%
TGGGACTCACGCGGAGGTAA+AGG - chr3.2:72132708-72132727 None:intergenic 60.0%
TGTGTCATGCTGTGCAGGGC+AGG + chr3.2:72134935-72134954 MS.gene77481:CDS 60.0%
TTCGCGACCGCACTCTTGAC+AGG + chr3.2:72132166-72132185 MS.gene77481:CDS 60.0%
TTGCGCGTTATGCACGGAGG+CGG + chr3.2:72134846-72134865 MS.gene77481:CDS 60.0%
! AACGCGCAACCTGATGGGCA+AGG - chr3.2:72134835-72134854 None:intergenic 60.0%
! GTTGCGTTGAGAGGTGTGGG+TGG - chr3.2:72132384-72132403 None:intergenic 60.0%
! TCCTCACCGCCGGTTACTAC+TGG + chr3.2:72132533-72132552 MS.gene77481:CDS 60.0%
! TGAGAGGTGTGGGTGGCCAT+GGG - chr3.2:72132377-72132396 None:intergenic 60.0%
! TTGAGAGGTGTGGGTGGCCA+TGG - chr3.2:72132378-72132397 None:intergenic 60.0%
ACTGCAAGTGCGGCTGCAGC+TGG - chr3.2:72132441-72132460 None:intergenic 65.0%
GCCAGTAGTAACCGGCGGTG+AGG - chr3.2:72132537-72132556 None:intergenic 65.0%
CGCGTTATGCACGGAGGCGG+AGG + chr3.2:72134849-72134868 MS.gene77481:CDS 70.0%
!! CGGAGGCGGAGGAGAGCGTT+TGG + chr3.2:72134860-72134879 MS.gene77481:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 72131997 72135170 72131997 ID=MS.gene77481
chr3.2 mRNA 72131997 72135170 72131997 ID=MS.gene77481.t1;Parent=MS.gene77481
chr3.2 exon 72131997 72133507 72131997 ID=MS.gene77481.t1.exon1;Parent=MS.gene77481.t1
chr3.2 CDS 72131997 72133507 72131997 ID=cds.MS.gene77481.t1;Parent=MS.gene77481.t1
chr3.2 exon 72134639 72134732 72134639 ID=MS.gene77481.t1.exon2;Parent=MS.gene77481.t1
chr3.2 CDS 72134639 72134732 72134639 ID=cds.MS.gene77481.t1;Parent=MS.gene77481.t1
chr3.2 exon 72134808 72135170 72134808 ID=MS.gene77481.t1.exon3;Parent=MS.gene77481.t1
chr3.2 CDS 72134808 72135170 72134808 ID=cds.MS.gene77481.t1;Parent=MS.gene77481.t1
Gene Sequence

>MS.gene77481

ATGGCATTGTGCCATCCTTTCTTAGTCAGCAATAACGGACCGGTAAATTCCCTCAGTTCCACTTTTCTTCGTGGAACAACACCTTCATCTTTTTCTGTGAATAGAAAACCAAAAACATGTAACCTTAAAAATCTATCTGTTTCAATTAGTTGTTCGTCTCTTAAAACTGTTCGCGACCGCACTCTTGACAGGCATGTTGTCATGAGGAACAGAATCCGGTTTGTTCAAAAGCTGAAAACTTTGCTTCTTTCTAAACCAAAACATTTTCTTCCGATTAAAATTCTGTCCAAATGTAGGGCTTATCTTTCACTTCATAAGCCTCGTTCCTTACTGTCTATGATCCATCGATATCCATCCATTTTTGAATTGTTTACTATCCCATGGCCACCCACACCTCTCAACGCAACTAAGTTATATCCTCAACTATGTGTTCGTTTGACTCCAGCTGCAGCCGCACTTGCAGTTGAGGAATTGAATCTTAAATCGTCTATTTCAACAGTATTGGCAAACAAACTCCAAAAGCTTCTTATGCTATCTCCTCACCGCCGGTTACTACTGGCAAAGTTGGTTCACCTTGCTCCTGATCTTGGTCTTCCTCCTAATTTTAGATCCCGGTTGTGCAATGACCATCCAGACAAATTCAAGATCATTGACACTTCCTATGGACGTGCACTTGAGCTTGTATCGTGCGATACCAACTTGGCAAAGCCTTTACCTCCGCGTGAGTCCCATTCTCTTGATTTAATAGTTGACCGACCTTTGAAGTTCAAACAATTGAGACTTCGAAAGGGGCTTAATTTAAAGAGGCCTCACCGGGATTACTTGCTAAAGTTTGAAGAAGTGCCAGAAGTGTGCCCTTATAACAACCCTGCTGAGAGTTTGGCCAAGGAATCAATTGAAGCAGAAAAGAGATGTTGTGCTGTTATAAGAGAGGTTCTTGGAATGACAATTGAAAAGAGGACATTAATAGACCACTTGACCCATTTCAGAAAGGAGTTTGGACTCCCAAATAAATTGAGAGGAATGATTGTGAGGCACCCCGAATTATTTTATACGAGTTTGAAAGGGCAAAGGGACTCGGTTTTCCTAGTAGAGCGATTTGATGAGAAGGGTAACTTATTGGAGAAGGATGAGGTTTTAGCCTTACAAGATAAATGGATGGACTTGGCGAGGGAGTCCAAGAGAATGAGAAGAGAGAGAAGGAAGGCTAGGATTGATAAAGAATTTGGCAGGTTGAGTGATGTAAATCAAAATCCCGATGACAGTGATATTGATTATGATGATGATATTGAGATTGATAATTTCAAAGATGATTATGATGATGATATTGAGATTGATAATTTCAAAGATGATTATGATGATGGTTTTGAGGATATATTTGAAGACTTGGATTTTGAAGCTGAGGATTATGACCTGGGAAACGATTTGTTTGACAACAAGATTGGAGAATTTTGGACTGCAGGACCTTTTCCGATTCAAAATGGTTCGGATAGAGAACAGAAGCAACCCTGGTAATTGTCAAAGTTAAGAATGCAATTTTCATACGTTAAGTAAAGGTTGGAATGAATTTTTGATCTGGCAAAAGGGAACCAGCCTGCATGTACCATATTATGATTATGATGGAGATATTGCTCTATGCTGGACTGTTGACTATAGTCTATAGATCATTCAAAGTAAAATTGTGTGTTTATAATAAGATTTGAGTAAAAGTGAGAAAGTTCAGAGGCATTTGTACTTGTACATATTGAAGGTTCCACCACTCGATAGCAATTAATTGTCTTTTGGACGTTAGCTAGCATTAATTTTTATTTTTTTTCAATGTATTTTTTTTATGGCTAATGTTAACTTGTGCCCTCAAGGCACATGTTAAGATACTCATTATAGAAATACACATATCAAAAGGCGTGCATTCAACTTCTTAAAAGTTGTTATATTGTGTTTTCCAATGCAAAATTGCTCTATTTAGGTTGCTTAACATGTGCCCTAAGGGCACAAGTTAACATGACCCTTTTTTTATTTATAACTCAGCATATACAGGAATAGTGATTTTGTAAATAAGTTGTGACTCTTGCATTAGGCTTATCTACAGGATCCTCCTTTTCTCCTCTTGATGATGCAATGCTTCTGACTCGAACTGTTGTTTTATGGTCAGTCTATTCTGTGGTAAGAATGATCTTTAGTAACAAAAACTTGAAGTTTTCGAAATTAAGCCAAGACTTCAACTTTTTATTCAAACCATGGCAAATGTTTCTGTTTCTTCTATGGGATTTACAGACTTGAGAGCCTTTAATTTATCTATGTTGGTGAAATAAGGGTGGAATATCATGAGCAAGCCGGATAAATTAGTCTCTAAAATTCTTAAGGCTAGGTATTTTCCAAACTACTCATTTGTTGAACGGTATGTCGGTCAAAGTTATGAAGGATCCATGGTTAAGGGTGCATGAGAGTAGGTAGTTGGATGCCTTCATTTCATAATCAAGAAATTCATAATATGCATGTGAGTGATCTAATGGTTCAAGGCCAAGGTGTTTGGGTTGCCAACAAAATTATTCTCTGTTTCATCCTTTGGTGGCCAAAAATATTCATTCGGTACCTCTGTTATCCCCTAATGATTTTGATTTACTGGTTTGGAATGAAGATAGCAGTGGAATATACTTGGTTAAATCAGCTTATAGATTGATGAGGAGATTTATGTGGAATGAAGAGAAGTTTCAGCAAGAGGGCGATTGGAATATGGTGTGGAATGTGAATGTCCCGTCAAAGGTTAGGAATTTGGTTTAGAGAATTAGTAGAGGTTGTTTACCGATGCAGAAGAAGCTTAATGAGCATCATGTACCTTGCCCATCAGGTTGCGCGTTATGCACGGAGGCGGAGGAGAGCGTTTGGCATTTGTTTCTTCCGTGTGATTTGAGTATTCGGCGTTGGCAAGAAGCGGGACTGTGTCATGCTGTGCAGGGCAGGATGCAGAGATATTTCAATATTGCAGGTGCGATCCTTGATATATGCTCGAGAGAAGTTGTTGATGTGGTTGCTCGACTCATGATGCTGCTATGGGGCATTTGGCACAATCGGAATGATCAAGTGTGGAATCACCATCACAGATGCACAGCAGATTTGCATCGGTGCTTATGTGTTCTTGATGGAGTGGATAGCTGCACAAGACGTGCATCATAG
Protein sequence

>MS.gene77481.t1

MALCHPFLVSNNGPVNSLSSTFLRGTTPSSFSVNRKPKTCNLKNLSVSISCSSLKTVRDRTLDRHVVMRNRIRFVQKLKTLLLSKPKHFLPIKILSKCRAYLSLHKPRSLLSMIHRYPSIFELFTIPWPPTPLNATKLYPQLCVRLTPAAAALAVEELNLKSSISTVLANKLQKLLMLSPHRRLLLAKLVHLAPDLGLPPNFRSRLCNDHPDKFKIIDTSYGRALELVSCDTNLAKPLPPRESHSLDLIVDRPLKFKQLRLRKGLNLKRPHRDYLLKFEEVPEVCPYNNPAESLAKESIEAEKRCCAVIREVLGMTIEKRTLIDHLTHFRKEFGLPNKLRGMIVRHPELFYTSLKGQRDSVFLVERFDEKGNLLEKDEVLALQDKWMDLARESKRMRRERRKARIDKEFGRLSDVNQNPDDSDIDYDDDIEIDNFKDDYDDDIEIDNFKDDYDDGFEDIFEDLDFEAEDYDLGNDLFDNKIGEFWTAGPFPIQNGSDREQKQPCSGIYLVKSAYRLMRRFMWNEEKFQQEGDWNMKKLNEHHVPCPSGCALCTEAEESVWHLFLPCDLSIRRWQEAGLCHAVQGRMQRYFNIAGAILDICSREVVDVVARLMMLLWGIWHNRNDQVWNHHHRCTADLHRCLCVLDGVDSCTRRAS