Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85133.t1 | XP_003597715.1 | 94.8 | 310 | 14 | 2 | 1 | 309 | 18 | 326 | 1.10E-163 | 585.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85133.t1 | Q38826 | 51.5 | 307 | 112 | 6 | 6 | 308 | 45 | 318 | 1.1e-74 | 281.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85133.t1 | G7IUP2 | 94.8 | 310 | 14 | 2 | 1 | 309 | 18 | 326 | 8.0e-164 | 585.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene85133.t1 | TR | AUX/IAA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene85133 | 0.829193 | 5.90E-55 | -1.69E-46 |
| MS.gene049227 | MS.gene85133 | 0.820067 | 8.34E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene85133 | 0.806041 | 9.97E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene85133 | 0.857439 | 1.63E-62 | -1.69E-46 |
| MS.gene049418 | MS.gene85133 | 0.815071 | 1.12E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene85133 | 0.874206 | 8.09E-68 | -1.69E-46 |
| MS.gene049807 | MS.gene85133 | 0.835991 | 1.22E-56 | -1.69E-46 |
| MS.gene049824 | MS.gene85133 | 0.810721 | 1.00E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene85133 | 0.814867 | 1.24E-51 | -1.69E-46 |
| MS.gene05045 | MS.gene85133 | 0.80481 | 1.81E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene85133 | 0.814698 | 1.35E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene85133 | 0.810683 | 1.02E-50 | -1.69E-46 |
| MS.gene050562 | MS.gene85133 | 0.809008 | 2.34E-50 | -1.69E-46 |
| MS.gene050901 | MS.gene85133 | 0.81463 | 1.40E-51 | -1.69E-46 |
| MS.gene051018 | MS.gene85133 | 0.856461 | 3.17E-62 | -1.69E-46 |
| MS.gene051021 | MS.gene85133 | 0.820313 | 7.33E-53 | -1.69E-46 |
| MS.gene051201 | MS.gene85133 | 0.806498 | 7.99E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene85133 | 0.819515 | 1.12E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene85133 | 0.860772 | 1.64E-63 | -1.69E-46 |
| MS.gene051648 | MS.gene85133 | 0.840587 | 7.95E-58 | -1.69E-46 |
| MS.gene051664 | MS.gene85133 | 0.851132 | 1.08E-60 | -1.69E-46 |
| MS.gene051700 | MS.gene85133 | 0.806522 | 7.90E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene85133 | 0.848135 | 7.43E-60 | -1.69E-46 |
| MS.gene051720 | MS.gene85133 | 0.891508 | 3.73E-74 | -1.69E-46 |
| MS.gene051744 | MS.gene85133 | 0.837258 | 5.78E-57 | -1.69E-46 |
| MS.gene052000 | MS.gene85133 | 0.818546 | 1.85E-52 | -1.69E-46 |
| MS.gene052150 | MS.gene85133 | 0.813908 | 2.02E-51 | -1.69E-46 |
| MS.gene052151 | MS.gene85133 | 0.811879 | 5.61E-51 | -1.69E-46 |
| MS.gene052239 | MS.gene85133 | -0.805672 | 1.19E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene85133 | 0.810807 | 9.59E-51 | -1.69E-46 |
| MS.gene052514 | MS.gene85133 | 0.806301 | 8.79E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene85133 | 0.834651 | 2.65E-56 | -1.69E-46 |
| MS.gene052628 | MS.gene85133 | 0.815982 | 6.99E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene85133 | 0.806776 | 6.98E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene85133 | 0.805101 | 1.57E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene85133 | 0.880499 | 5.22E-70 | -1.69E-46 |
| MS.gene053226 | MS.gene85133 | 0.838515 | 2.75E-57 | -1.69E-46 |
| MS.gene053536 | MS.gene85133 | 0.85369 | 2.02E-61 | -1.69E-46 |
| MS.gene053538 | MS.gene85133 | 0.848274 | 6.81E-60 | -1.69E-46 |
| MS.gene053581 | MS.gene85133 | 0.837748 | 4.33E-57 | -1.69E-46 |
| MS.gene053599 | MS.gene85133 | 0.807057 | 6.09E-50 | -1.69E-46 |
| MS.gene054142 | MS.gene85133 | 0.818916 | 1.53E-52 | -1.69E-46 |
| MS.gene05423 | MS.gene85133 | 0.810874 | 9.28E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene85133 | 0.876985 | 9.03E-69 | -1.69E-46 |
| MS.gene05458 | MS.gene85133 | 0.80445 | 2.15E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene85133 | 0.820032 | 8.50E-53 | -1.69E-46 |
| MS.gene055083 | MS.gene85133 | 0.842354 | 2.72E-58 | -1.69E-46 |
| MS.gene055144 | MS.gene85133 | 0.823234 | 1.55E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene85133 | 0.845376 | 4.22E-59 | -1.69E-46 |
| MS.gene055466 | MS.gene85133 | 0.850624 | 1.51E-60 | -1.69E-46 |
| MS.gene055468 | MS.gene85133 | 0.82063 | 6.20E-53 | -1.69E-46 |
| MS.gene055469 | MS.gene85133 | 0.806644 | 7.44E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene85133 | 0.892866 | 1.07E-74 | -1.69E-46 |
| MS.gene055580 | MS.gene85133 | -0.836523 | 8.90E-57 | -1.69E-46 |
| MS.gene055890 | MS.gene85133 | 0.807949 | 3.94E-50 | -1.69E-46 |
| MS.gene055891 | MS.gene85133 | 0.817823 | 2.70E-52 | -1.69E-46 |
| MS.gene056005 | MS.gene85133 | 0.8233 | 1.49E-53 | -1.69E-46 |
| MS.gene056043 | MS.gene85133 | -0.807462 | 5.00E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene85133 | 0.816615 | 5.05E-52 | -1.69E-46 |
| MS.gene056169 | MS.gene85133 | 0.824893 | 6.30E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene85133 | 0.832597 | 8.63E-56 | -1.69E-46 |
| MS.gene056595 | MS.gene85133 | 0.813804 | 2.13E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene85133 | 0.82342 | 1.40E-53 | -1.69E-46 |
| MS.gene057082 | MS.gene85133 | 0.854007 | 1.64E-61 | -1.69E-46 |
| MS.gene057132 | MS.gene85133 | 0.83257 | 8.77E-56 | -1.69E-46 |
| MS.gene057294 | MS.gene85133 | 0.804537 | 2.06E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene85133 | 0.815242 | 1.02E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene85133 | 0.807515 | 4.87E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene85133 | 0.807788 | 4.26E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene85133 | 0.842943 | 1.90E-58 | -1.69E-46 |
| MS.gene05894 | MS.gene85133 | 0.881195 | 2.94E-70 | -1.69E-46 |
| MS.gene059015 | MS.gene85133 | 0.826601 | 2.48E-54 | -1.69E-46 |
| MS.gene059424 | MS.gene85133 | 0.849868 | 2.45E-60 | -1.69E-46 |
| MS.gene059426 | MS.gene85133 | 0.800525 | 1.38E-48 | -1.69E-46 |
| MS.gene059625 | MS.gene85133 | 0.804586 | 2.01E-49 | -1.69E-46 |
| MS.gene060519 | MS.gene85133 | 0.851256 | 9.99E-61 | -1.69E-46 |
| MS.gene060587 | MS.gene85133 | 0.802999 | 4.30E-49 | -1.69E-46 |
| MS.gene060962 | MS.gene85133 | 0.811666 | 6.25E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene85133 | 0.808081 | 3.69E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene85133 | 0.801748 | 7.78E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85133.t1 | MTR_2g101500 | 94.839 | 310 | 14 | 2 | 1 | 309 | 18 | 326 | 0.0 | 602 |
| MS.gene85133.t1 | MTR_8g103030 | 56.090 | 312 | 85 | 10 | 8 | 309 | 24 | 293 | 2.52e-101 | 299 |
| MS.gene85133.t1 | MTR_5g030710 | 53.459 | 318 | 111 | 8 | 2 | 309 | 45 | 335 | 3.88e-101 | 300 |
| MS.gene85133.t1 | MTR_8g067530 | 52.681 | 317 | 112 | 8 | 2 | 309 | 69 | 356 | 6.36e-100 | 298 |
| MS.gene85133.t1 | MTR_6g488150 | 53.398 | 309 | 78 | 9 | 3 | 309 | 10 | 254 | 9.31e-92 | 273 |
| MS.gene85133.t1 | MTR_5g067350 | 51.887 | 318 | 114 | 10 | 2 | 309 | 59 | 347 | 8.66e-90 | 271 |
| MS.gene85133.t1 | MTR_1g080860 | 44.300 | 307 | 100 | 8 | 6 | 308 | 13 | 252 | 1.25e-65 | 206 |
| MS.gene85133.t1 | MTR_1g070520 | 64.024 | 164 | 53 | 3 | 150 | 309 | 84 | 245 | 1.40e-65 | 206 |
| MS.gene85133.t1 | MTR_7g096090 | 62.733 | 161 | 55 | 3 | 150 | 309 | 94 | 250 | 1.26e-64 | 204 |
| MS.gene85133.t1 | MTR_1g093240 | 62.112 | 161 | 58 | 2 | 150 | 309 | 78 | 236 | 1.59e-63 | 201 |
| MS.gene85133.t1 | MTR_1g080860 | 44.108 | 297 | 95 | 8 | 6 | 298 | 13 | 242 | 1.26e-61 | 196 |
| MS.gene85133.t1 | MTR_1g093240 | 63.087 | 149 | 52 | 2 | 150 | 297 | 78 | 224 | 1.42e-58 | 188 |
| MS.gene85133.t1 | MTR_1g040675 | 49.741 | 193 | 64 | 6 | 111 | 297 | 17 | 182 | 3.80e-51 | 167 |
| MS.gene85133.t1 | MTR_1g070830 | 44.248 | 226 | 100 | 5 | 73 | 297 | 1 | 201 | 2.92e-50 | 166 |
| MS.gene85133.t1 | MTR_1g076270 | 54.362 | 149 | 41 | 5 | 149 | 297 | 57 | 178 | 5.90e-46 | 154 |
| MS.gene85133.t1 | MTR_1g093350 | 54.362 | 149 | 41 | 5 | 149 | 297 | 57 | 178 | 5.90e-46 | 154 |
| MS.gene85133.t1 | MTR_1g093240 | 60.156 | 128 | 48 | 2 | 150 | 276 | 78 | 203 | 9.69e-46 | 154 |
| MS.gene85133.t1 | MTR_6g488150 | 45.887 | 231 | 59 | 9 | 3 | 231 | 10 | 176 | 1.52e-45 | 153 |
| MS.gene85133.t1 | MTR_5g067350 | 44.583 | 240 | 97 | 9 | 2 | 231 | 59 | 272 | 7.02e-44 | 151 |
| MS.gene85133.t1 | MTR_1g040675 | 47.093 | 172 | 58 | 6 | 111 | 276 | 17 | 161 | 2.51e-39 | 136 |
| MS.gene85133.t1 | MTR_1g069495 | 45.213 | 188 | 69 | 7 | 154 | 308 | 81 | 267 | 2.66e-36 | 131 |
| MS.gene85133.t1 | MTR_4g011880 | 49.669 | 151 | 44 | 5 | 153 | 301 | 52 | 172 | 4.30e-32 | 117 |
| MS.gene85133.t1 | MTR_2g100780 | 40.113 | 177 | 86 | 4 | 137 | 293 | 78 | 254 | 1.58e-31 | 119 |
| MS.gene85133.t1 | MTR_2g100780 | 40.113 | 177 | 86 | 4 | 137 | 293 | 78 | 254 | 2.25e-31 | 118 |
| MS.gene85133.t1 | MTR_8g014520 | 41.401 | 157 | 77 | 3 | 152 | 293 | 104 | 260 | 2.04e-29 | 113 |
| MS.gene85133.t1 | MTR_2g102490 | 52.336 | 107 | 39 | 3 | 189 | 292 | 86 | 183 | 2.05e-29 | 111 |
| MS.gene85133.t1 | MTR_8g014520 | 41.401 | 157 | 77 | 3 | 152 | 293 | 104 | 260 | 2.17e-29 | 113 |
| MS.gene85133.t1 | MTR_4g124300 | 34.899 | 149 | 64 | 7 | 149 | 291 | 60 | 181 | 1.43e-17 | 79.3 |
| MS.gene85133.t1 | MTR_3g106850 | 30.323 | 155 | 77 | 6 | 146 | 293 | 79 | 209 | 1.24e-16 | 77.4 |
| MS.gene85133.t1 | MTR_7g110790 | 39.423 | 104 | 49 | 3 | 187 | 290 | 66 | 155 | 2.97e-15 | 72.4 |
| MS.gene85133.t1 | MTR_1g085750 | 39.216 | 102 | 48 | 2 | 189 | 290 | 83 | 170 | 3.66e-15 | 72.8 |
| MS.gene85133.t1 | MTR_1g109510 | 30.137 | 146 | 80 | 4 | 146 | 290 | 44 | 168 | 6.76e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85133.t1 | AT2G22670 | 51.466 | 307 | 112 | 6 | 6 | 308 | 45 | 318 | 1.23e-95 | 286 |
| MS.gene85133.t1 | AT2G22670 | 51.466 | 307 | 112 | 6 | 6 | 308 | 45 | 318 | 1.23e-95 | 286 |
| MS.gene85133.t1 | AT2G22670 | 51.466 | 307 | 112 | 6 | 6 | 308 | 62 | 335 | 1.39e-95 | 286 |
| MS.gene85133.t1 | AT4G29080 | 55.161 | 310 | 89 | 11 | 8 | 309 | 38 | 305 | 8.12e-95 | 283 |
| MS.gene85133.t1 | AT2G22670 | 50.814 | 307 | 112 | 7 | 6 | 308 | 45 | 316 | 2.64e-92 | 277 |
| MS.gene85133.t1 | AT2G22670 | 50.814 | 307 | 112 | 7 | 6 | 308 | 45 | 316 | 2.64e-92 | 277 |
| MS.gene85133.t1 | AT5G65670 | 50.327 | 306 | 116 | 8 | 6 | 306 | 59 | 333 | 2.03e-87 | 265 |
| MS.gene85133.t1 | AT5G65670 | 50.000 | 308 | 116 | 9 | 6 | 306 | 59 | 335 | 1.34e-85 | 261 |
| MS.gene85133.t1 | AT4G14550 | 42.951 | 305 | 94 | 6 | 8 | 309 | 1 | 228 | 1.68e-68 | 213 |
| MS.gene85133.t1 | AT3G04730 | 50.877 | 228 | 90 | 4 | 98 | 309 | 15 | 236 | 2.79e-66 | 207 |
| MS.gene85133.t1 | AT4G14550 | 42.662 | 293 | 88 | 6 | 8 | 297 | 1 | 216 | 8.17e-64 | 201 |
| MS.gene85133.t1 | AT3G23050 | 41.311 | 305 | 98 | 7 | 8 | 304 | 6 | 237 | 3.16e-61 | 195 |
| MS.gene85133.t1 | AT1G04250 | 51.232 | 203 | 86 | 5 | 110 | 308 | 35 | 228 | 1.31e-58 | 188 |
| MS.gene85133.t1 | AT4G14550 | 39.706 | 272 | 84 | 6 | 8 | 276 | 1 | 195 | 2.37e-50 | 166 |
| MS.gene85133.t1 | AT1G04240 | 56.000 | 150 | 45 | 4 | 149 | 298 | 58 | 186 | 2.58e-48 | 160 |
| MS.gene85133.t1 | AT5G43700 | 51.136 | 176 | 60 | 6 | 123 | 298 | 33 | 182 | 1.03e-47 | 158 |
| MS.gene85133.t1 | AT1G04240 | 56.000 | 150 | 45 | 4 | 148 | 297 | 157 | 285 | 1.97e-47 | 161 |
| MS.gene85133.t1 | AT3G23030 | 49.162 | 179 | 56 | 5 | 122 | 297 | 24 | 170 | 7.71e-45 | 150 |
| MS.gene85133.t1 | AT3G23030 | 49.162 | 179 | 56 | 5 | 122 | 297 | 111 | 257 | 4.30e-44 | 151 |
| MS.gene85133.t1 | AT3G23050 | 37.545 | 277 | 92 | 7 | 8 | 276 | 6 | 209 | 1.52e-43 | 148 |
| MS.gene85133.t1 | AT4G14560 | 54.545 | 154 | 40 | 3 | 141 | 294 | 41 | 164 | 5.30e-41 | 140 |
| MS.gene85133.t1 | AT1G52830 | 44.785 | 163 | 62 | 4 | 135 | 297 | 50 | 184 | 2.87e-40 | 139 |
| MS.gene85133.t1 | AT3G15540 | 49.390 | 164 | 56 | 6 | 142 | 302 | 56 | 195 | 5.15e-39 | 136 |
| MS.gene85133.t1 | AT4G28640 | 44.571 | 175 | 77 | 5 | 140 | 298 | 72 | 242 | 3.00e-36 | 130 |
| MS.gene85133.t1 | AT4G28640 | 44.509 | 173 | 76 | 5 | 140 | 296 | 72 | 240 | 4.47e-36 | 130 |
| MS.gene85133.t1 | AT4G28640 | 44.509 | 173 | 76 | 5 | 140 | 296 | 72 | 240 | 3.36e-35 | 129 |
| MS.gene85133.t1 | AT2G33310 | 39.894 | 188 | 88 | 2 | 132 | 300 | 53 | 234 | 4.61e-35 | 127 |
| MS.gene85133.t1 | AT2G33310 | 42.286 | 175 | 75 | 3 | 146 | 300 | 65 | 233 | 5.50e-35 | 127 |
| MS.gene85133.t1 | AT2G33310 | 42.286 | 175 | 75 | 3 | 146 | 300 | 65 | 233 | 5.50e-35 | 127 |
| MS.gene85133.t1 | AT1G15580 | 46.528 | 144 | 44 | 3 | 150 | 292 | 48 | 159 | 2.33e-34 | 123 |
| MS.gene85133.t1 | AT1G04550 | 40.741 | 189 | 81 | 5 | 143 | 309 | 57 | 236 | 5.52e-34 | 124 |
| MS.gene85133.t1 | AT3G16500 | 37.198 | 207 | 104 | 5 | 109 | 293 | 50 | 252 | 6.97e-32 | 120 |
| MS.gene85133.t1 | AT3G16500 | 37.198 | 207 | 104 | 5 | 109 | 293 | 50 | 252 | 7.87e-32 | 119 |
| MS.gene85133.t1 | AT4G14550 | 35.841 | 226 | 67 | 5 | 8 | 230 | 1 | 151 | 2.19e-29 | 110 |
| MS.gene85133.t1 | AT5G25890 | 41.060 | 151 | 66 | 4 | 154 | 304 | 47 | 174 | 2.25e-29 | 110 |
| MS.gene85133.t1 | AT1G51950 | 38.012 | 171 | 82 | 3 | 143 | 293 | 84 | 250 | 2.63e-28 | 110 |
| MS.gene85133.t1 | AT1G04100 | 38.922 | 167 | 74 | 4 | 157 | 297 | 95 | 259 | 3.81e-28 | 109 |
| MS.gene85133.t1 | AT3G23050 | 32.900 | 231 | 76 | 6 | 8 | 230 | 6 | 165 | 3.19e-24 | 97.1 |
| MS.gene85133.t1 | AT3G17600 | 37.241 | 145 | 63 | 6 | 147 | 290 | 37 | 154 | 4.41e-21 | 88.2 |
| MS.gene85133.t1 | AT3G62100 | 42.574 | 101 | 43 | 2 | 190 | 290 | 83 | 168 | 2.22e-18 | 81.3 |
| MS.gene85133.t1 | AT2G46990 | 41.584 | 101 | 44 | 2 | 190 | 290 | 85 | 170 | 7.82e-18 | 80.1 |
| MS.gene85133.t1 | AT4G32280 | 35.644 | 101 | 45 | 2 | 190 | 290 | 118 | 198 | 2.03e-14 | 71.2 |
| MS.gene85133.t1 | AT4G32280 | 28.571 | 168 | 69 | 4 | 154 | 290 | 93 | 240 | 2.94e-14 | 71.6 |
| MS.gene85133.t1 | AT3G62100 | 41.379 | 87 | 36 | 2 | 190 | 276 | 83 | 154 | 1.34e-13 | 67.8 |
| MS.gene85133.t1 | AT2G46990 | 41.379 | 87 | 36 | 2 | 190 | 276 | 85 | 156 | 1.83e-13 | 67.4 |
| MS.gene85133.t1 | AT1G15050 | 36.190 | 105 | 51 | 1 | 191 | 295 | 62 | 150 | 7.99e-12 | 62.8 |
| MS.gene85133.t1 | AT1G15050 | 36.190 | 105 | 51 | 1 | 191 | 295 | 94 | 182 | 1.59e-11 | 62.8 |
| MS.gene85133.t1 | AT2G01200 | 34.127 | 126 | 63 | 2 | 170 | 295 | 83 | 188 | 2.03e-11 | 62.4 |
| MS.gene85133.t1 | AT2G01200 | 34.127 | 126 | 63 | 2 | 170 | 295 | 83 | 188 | 2.03e-11 | 62.4 |
Find 71 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTCTCCTGGACTTCC+TGG | 0.219552 | 2.4:+3318842 | MS.gene85133:CDS |
| TGCTTGTAGGTGATGTTCCT+TGG | 0.297899 | 2.4:+3318954 | MS.gene85133:CDS |
| GATGCCATTGATGAGTCTTC+TGG | 0.307952 | 2.4:+3317689 | MS.gene85133:CDS |
| GAAAAGAATAAACAGGTTAA+TGG | 0.313899 | 2.4:+3317881 | MS.gene85133:CDS |
| CTGTAATAGGGCACAGGTTG+TGG | 0.328430 | 2.4:+3318336 | MS.gene85133:intron |
| GCTTGTAGGTGATGTTCCTT+GGG | 0.334696 | 2.4:+3318955 | MS.gene85133:CDS |
| CAAGACCTACAACAACTATA+TGG | 0.360524 | 2.4:+3318507 | MS.gene85133:CDS |
| ATGAAAGGCTCCGAGGCAAT+TGG | 0.372758 | 2.4:+3319258 | MS.gene85133:CDS |
| AATGTTCTTCAAATCCTTGT+TGG | 0.373464 | 2.4:-3317603 | None:intergenic |
| TCTTTGAGGGATCTTCTTCA+TGG | 0.378941 | 2.4:+3318887 | MS.gene85133:CDS |
| ATCTTCTTCTCTCAACTTCA+AGG | 0.387877 | 2.4:+3317490 | MS.gene85133:CDS |
| TCTCTATGTAAAAGTCAGTA+TGG | 0.396729 | 2.4:+3318453 | MS.gene85133:CDS |
| AAGTTCCATATAGTTGTTGT+AGG | 0.402215 | 2.4:-3318512 | None:intergenic |
| TTGATGAGTCTTCTGGGAAA+TGG | 0.428366 | 2.4:+3317696 | MS.gene85133:CDS |
| AGATCAACCTTTCTGAGATA+AGG | 0.437164 | 2.4:-3318484 | None:intergenic |
| TTTCCAACATTCCCTCCTCT+TGG | 0.438896 | 2.4:-3317764 | None:intergenic |
| ATGAAGATAAAGATGGAGAT+TGG | 0.439416 | 2.4:+3318930 | MS.gene85133:CDS |
| CCTGGACTTCCTGGGAAAGA+TGG | 0.446287 | 2.4:+3318851 | MS.gene85133:CDS |
| ATGCCATTGATGAGTCTTCT+GGG | 0.457749 | 2.4:+3317690 | MS.gene85133:CDS |
| TGTACATGAAAAGAATAAAC+AGG | 0.460606 | 2.4:+3317874 | MS.gene85133:CDS |
| TGTAATAGGGCACAGGTTGT+GGG | 0.465911 | 2.4:+3318337 | MS.gene85133:intron |
| GACTAAGTGAGAGCTCTTTG+AGG | 0.466933 | 2.4:+3318873 | MS.gene85133:CDS |
| TCAGGTCAATGCAATTCTCC+TGG | 0.470704 | 2.4:+3318833 | MS.gene85133:intron |
| CAAGAGCCATGGGAAAATCT+AGG | 0.474403 | 2.4:+3319561 | MS.gene85133:CDS |
| CCATCTTTCCCAGGAAGTCC+AGG | 0.476059 | 2.4:-3318851 | None:intergenic |
| AAGAACCTTGTAGCTAGTGT+TGG | 0.483602 | 2.4:+3317647 | MS.gene85133:CDS |
| TGAAAGGCTCCGAGGCAATT+GGG | 0.483983 | 2.4:+3319259 | MS.gene85133:CDS |
| CCGACTCGTGTAGGAGACTA+AGG | 0.487592 | 2.4:+3319232 | MS.gene85133:CDS |
| TTTCGAAACGATCGAATTGG+TGG | 0.491043 | 2.4:-3318364 | None:intergenic |
| ACATAGAGACAGTCAAATCC+TGG | 0.496327 | 2.4:-3318439 | None:intergenic |
| GTTAGTACCAATGGTAAAGC+AGG | 0.504295 | 2.4:-3318560 | None:intergenic |
| TCAGTTGCTACTGCTGCTGC+TGG | 0.505717 | 2.4:+3317563 | MS.gene85133:CDS |
| GATGGAGATTGGATGCTTGT+AGG | 0.506785 | 2.4:+3318941 | MS.gene85133:CDS |
| CTATCAGGAGATTCACAACC+AGG | 0.513603 | 2.4:-3317536 | None:intergenic |
| GAGCTCAGACTAGGCTTACC+TGG | 0.513881 | 2.4:+3317518 | MS.gene85133:CDS |
| TGGAGTTTCTCTATGAATGA+TGG | 0.515427 | 2.4:+3317716 | MS.gene85133:CDS |
| GCTAGTGTTGGAGCTAAAAG+AGG | 0.516388 | 2.4:+3317659 | MS.gene85133:CDS |
| GTTGCTACTGCTGCTGCTGG+TGG | 0.518150 | 2.4:+3317566 | MS.gene85133:CDS |
| TAGCTCCAACACTAGCTACA+AGG | 0.519601 | 2.4:-3317652 | None:intergenic |
| GGCTCCGAGGCAATTGGGCT+AGG | 0.521923 | 2.4:+3319264 | MS.gene85133:CDS |
| GATGAAGCTGAGGGAAAACC+AGG | 0.522587 | 2.4:+3318421 | MS.gene85133:CDS |
| ATGTTCACCTGCTTTACCAT+TGG | 0.525163 | 2.4:+3318553 | MS.gene85133:CDS |
| TCTCCAAGAGGAGGGAATGT+TGG | 0.528075 | 2.4:+3317761 | MS.gene85133:CDS |
| TCACTTAGTCCATCTTTCCC+AGG | 0.528669 | 2.4:-3318860 | None:intergenic |
| ACTAAGTGAGAGCTCTTTGA+GGG | 0.537995 | 2.4:+3318874 | MS.gene85133:CDS |
| GCAATTCTCCTGGACTTCCT+GGG | 0.538453 | 2.4:+3318843 | MS.gene85133:CDS |
| CTTACATATGAAGATAAAGA+TGG | 0.540325 | 2.4:+3318923 | MS.gene85133:CDS |
| CATACCTAGCCCAATTGCCT+CGG | 0.543011 | 2.4:-3319268 | None:intergenic |
| GTTTGCAGCTCCAAGAGCCA+TGG | 0.546429 | 2.4:+3319550 | MS.gene85133:intron |
| TATGTAAAAGTCAGTATGGA+TGG | 0.548265 | 2.4:+3318457 | MS.gene85133:CDS |
| AGTCTCTTTCTTTGCCAACA+AGG | 0.555451 | 2.4:+3317589 | MS.gene85133:CDS |
| AAAGAAACATACTTTGCAGC+AGG | 0.558479 | 2.4:-3317926 | None:intergenic |
| TTTGCAGCTCCAAGAGCCAT+GGG | 0.568102 | 2.4:+3319551 | MS.gene85133:intron |
| TCTATGAATGATGGATCTGA+AGG | 0.572939 | 2.4:+3317725 | MS.gene85133:CDS |
| AAGGAAACTGAGCTCAGACT+AGG | 0.575995 | 2.4:+3317509 | MS.gene85133:CDS |
| AAACTTCTGTAATAGGGCAC+AGG | 0.579506 | 2.4:+3318330 | MS.gene85133:intron |
| TGGTGCTCCTTATCTCAGAA+AGG | 0.583817 | 2.4:+3318477 | MS.gene85133:CDS |
| TTTCCCAGAAGACTCATCAA+TGG | 0.587418 | 2.4:-3317693 | None:intergenic |
| CTTTGTTCTCTCCAAGAGGA+GGG | 0.588412 | 2.4:+3317753 | MS.gene85133:CDS |
| AAAGAACAATGATGAAGCTG+AGG | 0.598000 | 2.4:+3318411 | MS.gene85133:CDS |
| GCTTTGTTCTCTCCAAGAGG+AGG | 0.598726 | 2.4:+3317752 | MS.gene85133:CDS |
| GGATGTTCGCCGACTCGTGT+AGG | 0.604960 | 2.4:+3319223 | MS.gene85133:intron |
| CTAGCTACAAGGTTCTTCAA+AGG | 0.626425 | 2.4:-3317641 | None:intergenic |
| ATAGGGCACAGGTTGTGGGA+TGG | 0.638025 | 2.4:+3318341 | MS.gene85133:intron |
| AAGAACAATGATGAAGCTGA+GGG | 0.641734 | 2.4:+3318412 | MS.gene85133:CDS |
| GCTGCTTTGTTCTCTCCAAG+AGG | 0.650123 | 2.4:+3317749 | MS.gene85133:CDS |
| CCTTAGTCTCCTACACGAGT+CGG | 0.654169 | 2.4:-3319232 | None:intergenic |
| AGGAGACTAAGGATCATGAA+AGG | 0.655773 | 2.4:+3319243 | MS.gene85133:CDS |
| CTTGTAGGTGATGTTCCTTG+GGG | 0.665765 | 2.4:+3318956 | MS.gene85133:CDS |
| TTGTAGGTGATGTTCCTTGG+GGG | 0.698490 | 2.4:+3318957 | MS.gene85133:CDS |
| AAGGATCATGAAAGGCTCCG+AGG | 0.730710 | 2.4:+3319251 | MS.gene85133:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGTTTGTTTTTTTAT+GGG | + | chr2.4:3318103-3318122 | MS.gene85133:intron | 10.0% |
| !!! | AAATTATTTACATGTGTTTT+AGG | + | chr2.4:3318654-3318673 | MS.gene85133:intron | 15.0% |
| !!! | GTTTTTTGTTTGTTTTTTTA+TGG | + | chr2.4:3318102-3318121 | MS.gene85133:intron | 15.0% |
| !! | AAAAAAATCATGTCTATTCA+AGG | - | chr2.4:3318150-3318169 | None:intergenic | 20.0% |
| !! | AAAAAATCATGTCTATTCAA+GGG | - | chr2.4:3318149-3318168 | None:intergenic | 20.0% |
| !! | AATAGTGGTTAATGAATATT+TGG | + | chr2.4:3318246-3318265 | MS.gene85133:intron | 20.0% |
| !! | ATAGTGGTTAATGAATATTT+GGG | + | chr2.4:3318247-3318266 | MS.gene85133:intron | 20.0% |
| !! | ATATCTTGTAATCTTTGATA+TGG | + | chr2.4:3319470-3319489 | MS.gene85133:intron | 20.0% |
| !! | CATGTATAATTCAAAAATAG+TGG | + | chr2.4:3318231-3318250 | MS.gene85133:intron | 20.0% |
| !! | GTGTGTAAAAAATCAAAATA+AGG | - | chr2.4:3318616-3318635 | None:intergenic | 20.0% |
| !! | TAAAATAAACAACAAAAGTC+TGG | - | chr2.4:3319377-3319396 | None:intergenic | 20.0% |
| !!! | ATTTTACAGCAAGTAAAAAA+AGG | - | chr2.4:3318638-3318657 | None:intergenic | 20.0% |
| !!! | CACTATTTTTGAATTATACA+TGG | - | chr2.4:3318233-3318252 | None:intergenic | 20.0% |
| ! | AAAATCAAAATAAGGAGCTA+AGG | - | chr2.4:3318608-3318627 | None:intergenic | 25.0% |
| ! | ACAATCTAATAATTGTAGTG+CGG | - | chr2.4:3319448-3319467 | None:intergenic | 25.0% |
| ! | ATATTCGTATTCCTAAAATC+AGG | + | chr2.4:3318815-3318834 | MS.gene85133:intron | 25.0% |
| ! | CAAAAAAAAGTAAACAGAAC+AGG | - | chr2.4:3317997-3318016 | None:intergenic | 25.0% |
| ! | CTTACATATGAAGATAAAGA+TGG | + | chr2.4:3318923-3318942 | MS.gene85133:CDS | 25.0% |
| ! | GAAAAGAATAAACAGGTTAA+TGG | + | chr2.4:3317881-3317900 | MS.gene85133:CDS | 25.0% |
| ! | TGTACATGAAAAGAATAAAC+AGG | + | chr2.4:3317874-3317893 | MS.gene85133:CDS | 25.0% |
| ! | TGTATCAAACTTCTGTAATA+GGG | + | chr2.4:3318324-3318343 | MS.gene85133:intron | 25.0% |
| ! | TTGTATCAAACTTCTGTAAT+AGG | + | chr2.4:3318323-3318342 | MS.gene85133:intron | 25.0% |
| !! | ATTTCTTTTTATTCGCTGTT+TGG | + | chr2.4:3318986-3319005 | MS.gene85133:intron | 25.0% |
| !! | TTACACTCTAGATTTGTTTA+AGG | + | chr2.4:3319296-3319315 | MS.gene85133:intron | 25.0% |
| !!! | AAGTTGACTTATTTTGTCTT+TGG | - | chr2.4:3319086-3319105 | None:intergenic | 25.0% |
| !!! | ACATGATTTTTTTCTCTCTT+TGG | + | chr2.4:3318157-3318176 | MS.gene85133:intron | 25.0% |
| AAGTTCCATATAGTTGTTGT+AGG | - | chr2.4:3318515-3318534 | None:intergenic | 30.0% | |
| AATGTTCTTCAAATCCTTGT+TGG | - | chr2.4:3317606-3317625 | None:intergenic | 30.0% | |
| AATGTTGGAAAAACTCTTGT+TGG | + | chr2.4:3317776-3317795 | MS.gene85133:CDS | 30.0% | |
| AATTAACTGTGTAACCAAAC+AGG | - | chr2.4:3318747-3318766 | None:intergenic | 30.0% | |
| ATGAAGATAAAGATGGAGAT+TGG | + | chr2.4:3318930-3318949 | MS.gene85133:CDS | 30.0% | |
| CAATCTAATAATTGTAGTGC+GGG | - | chr2.4:3319447-3319466 | None:intergenic | 30.0% | |
| CAGCTTAATTAAGCACTTAT+AGG | + | chr2.4:3319014-3319033 | MS.gene85133:intron | 30.0% | |
| TAAGGTAAGTAATCTGAAGA+AGG | - | chr2.4:3318590-3318609 | None:intergenic | 30.0% | |
| TAATCTTTGATATGGATCAC+TGG | + | chr2.4:3319478-3319497 | MS.gene85133:intron | 30.0% | |
| TATCTTATCTAGATCCTGTT+TGG | + | chr2.4:3318730-3318749 | MS.gene85133:intron | 30.0% | |
| TATGTAAAAGTCAGTATGGA+TGG | + | chr2.4:3318457-3318476 | MS.gene85133:CDS | 30.0% | |
| TCTCTATGTAAAAGTCAGTA+TGG | + | chr2.4:3318453-3318472 | MS.gene85133:CDS | 30.0% | |
| TGCAACAAAAAACATCAAAG+AGG | + | chr2.4:3317838-3317857 | MS.gene85133:CDS | 30.0% | |
| ! | AATCGGCTTAACTAAATTGT+TGG | + | chr2.4:3319192-3319211 | MS.gene85133:intron | 30.0% |
| ! | CTTTTGTTCATGTCATGTTT+TGG | + | chr2.4:3318023-3318042 | MS.gene85133:intron | 30.0% |
| !! | AATTGCATTGACCTGATTTT+AGG | - | chr2.4:3318829-3318848 | None:intergenic | 30.0% |
| !! | AGCTTCAATATGAAAGTGTT+TGG | - | chr2.4:3319143-3319162 | None:intergenic | 30.0% |
| !! | GCTTCAATATGAAAGTGTTT+GGG | - | chr2.4:3319142-3319161 | None:intergenic | 30.0% |
| !!! | ATGGATCACTGGTTTTATAT+TGG | + | chr2.4:3319489-3319508 | MS.gene85133:intron | 30.0% |
| !!! | ATTTGGGTTGTTTTCAGAAA+AGG | + | chr2.4:3318263-3318282 | MS.gene85133:intron | 30.0% |
| !!! | TTTTTTCGAAACGATCGAAT+TGG | - | chr2.4:3318370-3318389 | None:intergenic | 30.0% |
| AAAGAAACATACTTTGCAGC+AGG | - | chr2.4:3317929-3317948 | None:intergenic | 35.0% | |
| AAAGAAATAACTTACCCCCA+AGG | - | chr2.4:3318974-3318993 | None:intergenic | 35.0% | |
| AAAGAACAATGATGAAGCTG+AGG | + | chr2.4:3318411-3318430 | MS.gene85133:CDS | 35.0% | |
| AAGAACAATGATGAAGCTGA+GGG | + | chr2.4:3318412-3318431 | MS.gene85133:CDS | 35.0% | |
| ATCGTTTCGAAAAAACACGA+TGG | + | chr2.4:3318375-3318394 | MS.gene85133:CDS | 35.0% | |
| ATCTTCTTCTCTCAACTTCA+AGG | + | chr2.4:3317490-3317509 | MS.gene85133:CDS | 35.0% | |
| CAAGACCTACAACAACTATA+TGG | + | chr2.4:3318507-3318526 | MS.gene85133:CDS | 35.0% | |
| CTTTCACCTTTGTCTAATCT+AGG | - | chr2.4:3318052-3318071 | None:intergenic | 35.0% | |
| GAAGGTAAAGTTAGTACCAA+TGG | - | chr2.4:3318572-3318591 | None:intergenic | 35.0% | |
| GTTAAATCGTGATAGTCCAA+TGG | + | chr2.4:3319166-3319185 | MS.gene85133:intron | 35.0% | |
| TGATAGTCCAATGGTTGAAT+CGG | + | chr2.4:3319175-3319194 | MS.gene85133:intron | 35.0% | |
| TGGAGTTTCTCTATGAATGA+TGG | + | chr2.4:3317716-3317735 | MS.gene85133:CDS | 35.0% | |
| TGGTTACCTAGATTAGACAA+AGG | + | chr2.4:3318043-3318062 | MS.gene85133:intron | 35.0% | |
| TTACATGAGAAAGTCAAGCT+AGG | - | chr2.4:3318689-3318708 | None:intergenic | 35.0% | |
| ! | ACTAAATTGTTGGTTGATGC+AGG | + | chr2.4:3319202-3319221 | MS.gene85133:intron | 35.0% |
| !! | AGATCAACCTTTCTGAGATA+AGG | - | chr2.4:3318487-3318506 | None:intergenic | 35.0% |
| !! | GTAGCAACTGATTTTCTATC+AGG | - | chr2.4:3317554-3317573 | None:intergenic | 35.0% |
| !! | TCTATGAATGATGGATCTGA+AGG | + | chr2.4:3317725-3317744 | MS.gene85133:CDS | 35.0% |
| AAACTTCTGTAATAGGGCAC+AGG | + | chr2.4:3318330-3318349 | MS.gene85133:intron | 40.0% | |
| AAGAACCTTGTAGCTAGTGT+TGG | + | chr2.4:3317647-3317666 | MS.gene85133:CDS | 40.0% | |
| ACATAGAGACAGTCAAATCC+TGG | - | chr2.4:3318442-3318461 | None:intergenic | 40.0% | |
| ACTAAGTGAGAGCTCTTTGA+GGG | + | chr2.4:3318874-3318893 | MS.gene85133:CDS | 40.0% | |
| AGGAGACTAAGGATCATGAA+AGG | + | chr2.4:3319243-3319262 | MS.gene85133:CDS | 40.0% | |
| AGTCTCTTTCTTTGCCAACA+AGG | + | chr2.4:3317589-3317608 | MS.gene85133:CDS | 40.0% | |
| ATGCCATTGATGAGTCTTCT+GGG | + | chr2.4:3317690-3317709 | MS.gene85133:CDS | 40.0% | |
| ATGTTCACCTGCTTTACCAT+TGG | + | chr2.4:3318553-3318572 | MS.gene85133:CDS | 40.0% | |
| CTAGCTACAAGGTTCTTCAA+AGG | - | chr2.4:3317644-3317663 | None:intergenic | 40.0% | |
| GTTAGTACCAATGGTAAAGC+AGG | - | chr2.4:3318563-3318582 | None:intergenic | 40.0% | |
| TTTCCCAGAAGACTCATCAA+TGG | - | chr2.4:3317696-3317715 | None:intergenic | 40.0% | |
| TTTCGAAACGATCGAATTGG+TGG | - | chr2.4:3318367-3318386 | None:intergenic | 40.0% | |
| ! | AGTTAAGCCGATTCAACCAT+TGG | - | chr2.4:3319185-3319204 | None:intergenic | 40.0% |
| ! | TCTTTGAGGGATCTTCTTCA+TGG | + | chr2.4:3318887-3318906 | MS.gene85133:CDS | 40.0% |
| ! | TTGATGAGTCTTCTGGGAAA+TGG | + | chr2.4:3317696-3317715 | MS.gene85133:CDS | 40.0% |
| AAGGAAACTGAGCTCAGACT+AGG | + | chr2.4:3317509-3317528 | MS.gene85133:CDS | 45.0% | |
| CAAGAGCCATGGGAAAATCT+AGG | + | chr2.4:3319561-3319580 | MS.gene85133:CDS | 45.0% | |
| CTATCAGGAGATTCACAACC+AGG | - | chr2.4:3317539-3317558 | None:intergenic | 45.0% | |
| CTTGTAGGTGATGTTCCTTG+GGG | + | chr2.4:3318956-3318975 | MS.gene85133:CDS | 45.0% | |
| CTTTGTTCTCTCCAAGAGGA+GGG | + | chr2.4:3317753-3317772 | MS.gene85133:CDS | 45.0% | |
| GACTAAGTGAGAGCTCTTTG+AGG | + | chr2.4:3318873-3318892 | MS.gene85133:CDS | 45.0% | |
| GATGCCATTGATGAGTCTTC+TGG | + | chr2.4:3317689-3317708 | MS.gene85133:CDS | 45.0% | |
| GATGGAGATTGGATGCTTGT+AGG | + | chr2.4:3318941-3318960 | MS.gene85133:CDS | 45.0% | |
| GCTTGTAGGTGATGTTCCTT+GGG | + | chr2.4:3318955-3318974 | MS.gene85133:CDS | 45.0% | |
| TAGCTCCAACACTAGCTACA+AGG | - | chr2.4:3317655-3317674 | None:intergenic | 45.0% | |
| TCACTTAGTCCATCTTTCCC+AGG | - | chr2.4:3318863-3318882 | None:intergenic | 45.0% | |
| TCAGGTCAATGCAATTCTCC+TGG | + | chr2.4:3318833-3318852 | MS.gene85133:intron | 45.0% | |
| TGCTTGTAGGTGATGTTCCT+TGG | + | chr2.4:3318954-3318973 | MS.gene85133:CDS | 45.0% | |
| TGGTGCTCCTTATCTCAGAA+AGG | + | chr2.4:3318477-3318496 | MS.gene85133:CDS | 45.0% | |
| TGTAATAGGGCACAGGTTGT+GGG | + | chr2.4:3318337-3318356 | MS.gene85133:intron | 45.0% | |
| TTGTAGGTGATGTTCCTTGG+GGG | + | chr2.4:3318957-3318976 | MS.gene85133:CDS | 45.0% | |
| TTTCCAACATTCCCTCCTCT+TGG | - | chr2.4:3317767-3317786 | None:intergenic | 45.0% | |
| ! | CTAGATTTTCCCATGGCTCT+TGG | - | chr2.4:3319563-3319582 | None:intergenic | 45.0% |
| ! | GCTAGTGTTGGAGCTAAAAG+AGG | + | chr2.4:3317659-3317678 | MS.gene85133:CDS | 45.0% |
| ! | TTGGCTCCTAGATTTTCCCA+TGG | - | chr2.4:3319570-3319589 | None:intergenic | 45.0% |
| AAGGATCATGAAAGGCTCCG+AGG | + | chr2.4:3319251-3319270 | MS.gene85133:CDS | 50.0% | |
| ATGAAAGGCTCCGAGGCAAT+TGG | + | chr2.4:3319258-3319277 | MS.gene85133:CDS | 50.0% | |
| CATACCTAGCCCAATTGCCT+CGG | - | chr2.4:3319271-3319290 | None:intergenic | 50.0% | |
| CCTTAGTCTCCTACACGAGT+CGG | - | chr2.4:3319235-3319254 | None:intergenic | 50.0% | |
| CTGTAATAGGGCACAGGTTG+TGG | + | chr2.4:3318336-3318355 | MS.gene85133:intron | 50.0% | |
| GATGAAGCTGAGGGAAAACC+AGG | + | chr2.4:3318421-3318440 | MS.gene85133:CDS | 50.0% | |
| GCAATTCTCCTGGACTTCCT+GGG | + | chr2.4:3318843-3318862 | MS.gene85133:CDS | 50.0% | |
| TCTCCAAGAGGAGGGAATGT+TGG | + | chr2.4:3317761-3317780 | MS.gene85133:CDS | 50.0% | |
| TGAAAGGCTCCGAGGCAATT+GGG | + | chr2.4:3319259-3319278 | MS.gene85133:CDS | 50.0% | |
| TGCAATTCTCCTGGACTTCC+TGG | + | chr2.4:3318842-3318861 | MS.gene85133:CDS | 50.0% | |
| TTTGCAGCTCCAAGAGCCAT+GGG | + | chr2.4:3319551-3319570 | MS.gene85133:intron | 50.0% | |
| ! | GCTGCTTTGTTCTCTCCAAG+AGG | + | chr2.4:3317749-3317768 | MS.gene85133:CDS | 50.0% |
| ! | GCTTTGTTCTCTCCAAGAGG+AGG | + | chr2.4:3317752-3317771 | MS.gene85133:CDS | 50.0% |
| ATAGGGCACAGGTTGTGGGA+TGG | + | chr2.4:3318341-3318360 | MS.gene85133:intron | 55.0% | |
| CCATCTTTCCCAGGAAGTCC+AGG | - | chr2.4:3318854-3318873 | None:intergenic | 55.0% | |
| CCTGGACTTCCTGGGAAAGA+TGG | + | chr2.4:3318851-3318870 | MS.gene85133:CDS | 55.0% | |
| GAGCTCAGACTAGGCTTACC+TGG | + | chr2.4:3317518-3317537 | MS.gene85133:CDS | 55.0% | |
| GTTTGCAGCTCCAAGAGCCA+TGG | + | chr2.4:3319550-3319569 | MS.gene85133:intron | 55.0% | |
| TCAGTTGCTACTGCTGCTGC+TGG | + | chr2.4:3317563-3317582 | MS.gene85133:CDS | 55.0% | |
| ! | CCGACTCGTGTAGGAGACTA+AGG | + | chr2.4:3319232-3319251 | MS.gene85133:CDS | 55.0% |
| GTTGCTACTGCTGCTGCTGG+TGG | + | chr2.4:3317566-3317585 | MS.gene85133:CDS | 60.0% | |
| !! | GGATGTTCGCCGACTCGTGT+AGG | + | chr2.4:3319223-3319242 | MS.gene85133:intron | 60.0% |
| GGCTCCGAGGCAATTGGGCT+AGG | + | chr2.4:3319264-3319283 | MS.gene85133:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 3317479 | 3319595 | 3317479 | ID=MS.gene85133 |
| chr2.4 | mRNA | 3317479 | 3319595 | 3317479 | ID=MS.gene85133.t1;Parent=MS.gene85133 |
| chr2.4 | exon | 3317479 | 3317936 | 3317479 | ID=MS.gene85133.t1.exon1;Parent=MS.gene85133.t1 |
| chr2.4 | CDS | 3317479 | 3317936 | 3317479 | ID=cds.MS.gene85133.t1;Parent=MS.gene85133.t1 |
| chr2.4 | exon | 3318345 | 3318574 | 3318345 | ID=MS.gene85133.t1.exon2;Parent=MS.gene85133.t1 |
| chr2.4 | CDS | 3318345 | 3318574 | 3318345 | ID=cds.MS.gene85133.t1;Parent=MS.gene85133.t1 |
| chr2.4 | exon | 3318837 | 3318978 | 3318837 | ID=MS.gene85133.t1.exon3;Parent=MS.gene85133.t1 |
| chr2.4 | CDS | 3318837 | 3318978 | 3318837 | ID=cds.MS.gene85133.t1;Parent=MS.gene85133.t1 |
| chr2.4 | exon | 3319224 | 3319285 | 3319224 | ID=MS.gene85133.t1.exon4;Parent=MS.gene85133.t1 |
| chr2.4 | CDS | 3319224 | 3319285 | 3319224 | ID=cds.MS.gene85133.t1;Parent=MS.gene85133.t1 |
| chr2.4 | exon | 3319558 | 3319595 | 3319558 | ID=MS.gene85133.t1.exon5;Parent=MS.gene85133.t1 |
| chr2.4 | CDS | 3319558 | 3319595 | 3319558 | ID=cds.MS.gene85133.t1;Parent=MS.gene85133.t1 |
| Gene Sequence |
| Protein sequence |
