Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89096.t1 | XP_024631393.1 | 88.8 | 365 | 30 | 1 | 1 | 354 | 1 | 365 | 1.10E-180 | 642.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89096.t1 | Q24JK4 | 50.9 | 369 | 140 | 9 | 1 | 348 | 1 | 349 | 5.4e-86 | 319.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89096.t1 | A0A396JJC2 | 88.8 | 365 | 30 | 1 | 1 | 354 | 1 | 365 | 8.3e-181 | 642.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene89096 | 0.802792 | 4.74E-49 | -1.69E-46 |
| MS.gene049341 | MS.gene89096 | 0.810303 | 1.23E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene89096 | 0.834184 | 3.47E-56 | -1.69E-46 |
| MS.gene049825 | MS.gene89096 | 0.815349 | 9.68E-52 | -1.69E-46 |
| MS.gene049873 | MS.gene89096 | 0.802732 | 4.88E-49 | -1.69E-46 |
| MS.gene049979 | MS.gene89096 | 0.804402 | 2.20E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene89096 | 0.803268 | 3.78E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene89096 | 0.810371 | 1.19E-50 | -1.69E-46 |
| MS.gene050438 | MS.gene89096 | 0.832903 | 7.25E-56 | -1.69E-46 |
| MS.gene05045 | MS.gene89096 | 0.807743 | 4.35E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene89096 | 0.845805 | 3.23E-59 | -1.69E-46 |
| MS.gene050721 | MS.gene89096 | 0.846262 | 2.43E-59 | -1.69E-46 |
| MS.gene050724 | MS.gene89096 | 0.841067 | 5.95E-58 | -1.69E-46 |
| MS.gene050807 | MS.gene89096 | 0.827617 | 1.42E-54 | -1.69E-46 |
| MS.gene050815 | MS.gene89096 | 0.81103 | 8.59E-51 | -1.69E-46 |
| MS.gene050844 | MS.gene89096 | 0.821882 | 3.19E-53 | -1.69E-46 |
| MS.gene050959 | MS.gene89096 | 0.809274 | 2.05E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene89096 | 0.838077 | 3.56E-57 | -1.69E-46 |
| MS.gene051328 | MS.gene89096 | 0.826771 | 2.26E-54 | -1.69E-46 |
| MS.gene051388 | MS.gene89096 | 0.821439 | 4.04E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene89096 | 0.828675 | 7.88E-55 | -1.69E-46 |
| MS.gene051719 | MS.gene89096 | 0.824932 | 6.17E-54 | -1.69E-46 |
| MS.gene051720 | MS.gene89096 | 0.805076 | 1.59E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene89096 | 0.803855 | 2.86E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene89096 | 0.827772 | 1.30E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene89096 | 0.810295 | 1.24E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene89096 | 0.815576 | 8.61E-52 | -1.69E-46 |
| MS.gene052561 | MS.gene89096 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene89096 | 0.822768 | 1.99E-53 | -1.69E-46 |
| MS.gene052613 | MS.gene89096 | 0.828937 | 6.81E-55 | -1.69E-46 |
| MS.gene052665 | MS.gene89096 | 0.829114 | 6.17E-55 | -1.69E-46 |
| MS.gene052773 | MS.gene89096 | 0.81009 | 1.37E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene89096 | 0.835963 | 1.24E-56 | -1.69E-46 |
| MS.gene052896 | MS.gene89096 | 0.826547 | 2.56E-54 | -1.69E-46 |
| MS.gene053008 | MS.gene89096 | 0.80326 | 3.79E-49 | -1.69E-46 |
| MS.gene053054 | MS.gene89096 | -0.812035 | 5.19E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene89096 | 0.82966 | 4.55E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene89096 | 0.829446 | 5.12E-55 | -1.69E-46 |
| MS.gene053599 | MS.gene89096 | 0.820443 | 6.84E-53 | -1.69E-46 |
| MS.gene054472 | MS.gene89096 | 0.81227 | 4.61E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene89096 | 0.800233 | 1.59E-48 | -1.69E-46 |
| MS.gene055363 | MS.gene89096 | 0.800703 | 1.27E-48 | -1.69E-46 |
| MS.gene055465 | MS.gene89096 | 0.809044 | 2.30E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene89096 | 0.846074 | 2.73E-59 | -1.69E-46 |
| MS.gene055468 | MS.gene89096 | 0.833742 | 4.48E-56 | -1.69E-46 |
| MS.gene055512 | MS.gene89096 | 0.825952 | 3.54E-54 | -1.69E-46 |
| MS.gene055580 | MS.gene89096 | -0.804931 | 1.70E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene89096 | 0.815459 | 9.14E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene89096 | 0.810608 | 1.06E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene89096 | 0.819325 | 1.23E-52 | -1.69E-46 |
| MS.gene055890 | MS.gene89096 | 0.808271 | 3.36E-50 | -1.69E-46 |
| MS.gene055891 | MS.gene89096 | 0.811674 | 6.22E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene89096 | 0.807435 | 5.06E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene89096 | 0.81532 | 9.82E-52 | -1.69E-46 |
| MS.gene056553 | MS.gene89096 | 0.803013 | 4.27E-49 | -1.69E-46 |
| MS.gene056760 | MS.gene89096 | 0.80416 | 2.47E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene89096 | 0.81599 | 6.96E-52 | -1.69E-46 |
| MS.gene057140 | MS.gene89096 | 0.810099 | 1.36E-50 | -1.69E-46 |
| MS.gene057414 | MS.gene89096 | 0.815317 | 9.83E-52 | -1.69E-46 |
| MS.gene057980 | MS.gene89096 | 0.800776 | 1.23E-48 | -1.69E-46 |
| MS.gene058084 | MS.gene89096 | 0.813296 | 2.75E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene89096 | 0.818992 | 1.47E-52 | -1.69E-46 |
| MS.gene058636 | MS.gene89096 | 0.846966 | 1.56E-59 | -1.69E-46 |
| MS.gene058829 | MS.gene89096 | 0.801651 | 8.14E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene89096 | 0.841277 | 5.24E-58 | -1.69E-46 |
| MS.gene05954 | MS.gene89096 | 0.81708 | 3.97E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene89096 | 0.821385 | 4.15E-53 | -1.69E-46 |
| MS.gene059725 | MS.gene89096 | 0.809982 | 1.45E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene89096 | 0.803914 | 2.78E-49 | -1.69E-46 |
| MS.gene059937 | MS.gene89096 | 0.821244 | 4.48E-53 | -1.69E-46 |
| MS.gene06001 | MS.gene89096 | 0.800222 | 1.59E-48 | -1.69E-46 |
| MS.gene060101 | MS.gene89096 | 0.800612 | 1.33E-48 | -1.69E-46 |
| MS.gene060312 | MS.gene89096 | 0.800382 | 1.48E-48 | -1.69E-46 |
| MS.gene060429 | MS.gene89096 | 0.843293 | 1.53E-58 | -1.69E-46 |
| MS.gene060572 | MS.gene89096 | 0.816986 | 4.17E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene89096 | 0.828426 | 9.05E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene89096 | 0.802132 | 6.49E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89096.t1 | MTR_2g102430 | 89.197 | 361 | 28 | 1 | 1 | 350 | 1 | 361 | 0.0 | 657 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89096.t1 | AT1G80420 | 51.075 | 372 | 135 | 10 | 1 | 348 | 1 | 349 | 2.15e-111 | 328 |
| MS.gene89096.t1 | AT1G80420 | 51.075 | 372 | 135 | 10 | 1 | 348 | 1 | 349 | 2.15e-111 | 328 |
| MS.gene89096.t1 | AT1G80420 | 51.075 | 372 | 135 | 10 | 1 | 348 | 1 | 349 | 2.15e-111 | 328 |
| MS.gene89096.t1 | AT1G80420 | 51.075 | 372 | 135 | 10 | 1 | 348 | 1 | 349 | 2.15e-111 | 328 |
| MS.gene89096.t1 | AT1G80420 | 50.136 | 367 | 134 | 9 | 1 | 348 | 1 | 337 | 4.98e-105 | 312 |
Find 72 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGATGGTCACGGAAATTT+TGG | 0.168059 | 2.4:-2650397 | MS.gene89096:CDS |
| TGTCGAAACTTGGGAGTATT+TGG | 0.171012 | 2.4:+2649684 | None:intergenic |
| TGTTGAGGAGCTTGCAAAAT+TGG | 0.254184 | 2.4:-2646533 | MS.gene89096:CDS |
| GGTGAGAAATCCAGTGAAAT+TGG | 0.267428 | 2.4:-2650349 | MS.gene89096:CDS |
| TTTACGAGGAAGAACTAAAT+AGG | 0.286647 | 2.4:-2646438 | MS.gene89096:CDS |
| GAACTCTAATTGCACTCTTT+TGG | 0.288941 | 2.4:-2649718 | MS.gene89096:CDS |
| AGCTTCAACTTGTCGAAACT+TGG | 0.336320 | 2.4:+2649674 | None:intergenic |
| TTGAACTTTGGTCTTCTTGT+TGG | 0.338177 | 2.4:+2650321 | None:intergenic |
| ACAAATGCTGCATCTTCTTC+TGG | 0.343819 | 2.4:-2646352 | MS.gene89096:CDS |
| TTTGTTATCTCACTTGGATC+TGG | 0.354921 | 2.4:+2647483 | None:intergenic |
| ATATCTTCCTTTGACATTGA+AGG | 0.399325 | 2.4:+2646490 | None:intergenic |
| TGCAGTCCAGTGCTAGTTTG+TGG | 0.400514 | 2.4:+2646467 | None:intergenic |
| ATGGAAGTAGTCTCCTTTGA+AGG | 0.419702 | 2.4:+2648008 | None:intergenic |
| GAGGTCGCGTGCTATGGAAA+TGG | 0.420876 | 2.4:-2649763 | MS.gene89096:CDS |
| GTTGGAAAGTCAAGAAGAAA+AGG | 0.430535 | 2.4:-2647787 | MS.gene89096:intron |
| TTAAATTTAACCAGGACATT+GGG | 0.434931 | 2.4:-2646591 | MS.gene89096:intron |
| CCATGATGGAAGGTTTCTCT+TGG | 0.438435 | 2.4:+2650435 | None:intergenic |
| CAATTTCAACGAGTTTCCTC+TGG | 0.440206 | 2.4:+2648700 | None:intergenic |
| GAATAAAACAATTCAGTGGT+TGG | 0.443870 | 2.4:-2647805 | MS.gene89096:CDS |
| CATCTTGAGGTCGCGTGCTA+TGG | 0.453790 | 2.4:-2649769 | MS.gene89096:CDS |
| GTTAAATTTAACCAGGACAT+TGG | 0.458466 | 2.4:-2646592 | MS.gene89096:intron |
| TGGGTGTTAGGATTGGATGC+AGG | 0.459523 | 2.4:-2648733 | MS.gene89096:intron |
| CGACAAGTTGAAGCTGATTG+TGG | 0.469462 | 2.4:-2649666 | MS.gene89096:CDS |
| TCACAGGTGACACATCTTAG+AGG | 0.470456 | 2.4:+2646255 | None:intergenic |
| TCACCACCTTCATCCAAAGT+TGG | 0.472003 | 2.4:+2650367 | None:intergenic |
| GATAGTTACCTTATGCATGC+TGG | 0.472246 | 2.4:-2648678 | MS.gene89096:CDS |
| GAAGGCTCAAAGCATTTCCT+AGG | 0.473486 | 2.4:+2647858 | None:intergenic |
| AGGTCGCGTGCTATGGAAAT+GGG | 0.481408 | 2.4:-2649762 | MS.gene89096:CDS |
| GTGAGAAATCCAGTGAAATT+GGG | 0.485864 | 2.4:-2650348 | MS.gene89096:CDS |
| GTTGGAAGACCCAATTTCAC+TGG | 0.493771 | 2.4:+2650339 | None:intergenic |
| ATGGTTTCCCAGCATGCATA+AGG | 0.493889 | 2.4:+2648670 | None:intergenic |
| TTGTGGAACCATTGTATCAA+AGG | 0.498296 | 2.4:-2649649 | MS.gene89096:intron |
| TGTGGTTTGTGGGGTACAGA+TGG | 0.499919 | 2.4:+2648050 | None:intergenic |
| GAAAAGACATTGACGATCCT+AGG | 0.500018 | 2.4:-2647875 | MS.gene89096:CDS |
| AAACCACAAAAGCATGTTGA+AGG | 0.502946 | 2.4:-2648035 | MS.gene89096:CDS |
| GCCCACTTCTTCACTTCAGA+AGG | 0.503953 | 2.4:+2647840 | None:intergenic |
| ATAGTTACCTTATGCATGCT+GGG | 0.506945 | 2.4:-2648677 | MS.gene89096:CDS |
| GACCTCAAGATGCCACGCTC+CGG | 0.520624 | 2.4:+2649780 | None:intergenic |
| AGATATCCACAAACTAGCAC+TGG | 0.527248 | 2.4:-2646473 | MS.gene89096:CDS |
| ATTCTTACCTCGAGTTGTTG+AGG | 0.540660 | 2.4:-2646548 | MS.gene89096:CDS |
| ATCCGGAGCGTGGCATCTTG+AGG | 0.545472 | 2.4:-2649782 | MS.gene89096:CDS |
| CAAAGATAAATGAAGAACAT+AGG | 0.545893 | 2.4:-2646390 | MS.gene89096:CDS |
| GAGCAGAGTATAAGCAGGAC+TGG | 0.547595 | 2.4:-2649740 | MS.gene89096:CDS |
| GCTGGGAAACCATGGCGTAA+AGG | 0.547805 | 2.4:-2648660 | MS.gene89096:CDS |
| TTGAAGTCATCCATGATGGA+AGG | 0.549060 | 2.4:+2650425 | None:intergenic |
| GCTTCAACTTGTCGAAACTT+GGG | 0.550803 | 2.4:+2649675 | None:intergenic |
| CCAAGAGAAACCTTCCATCA+TGG | 0.554767 | 2.4:-2650435 | MS.gene89096:CDS |
| AAGAGACCAACTTTGGATGA+AGG | 0.555473 | 2.4:-2650373 | MS.gene89096:CDS |
| AGCCTTCTGAAGTGAAGAAG+TGG | 0.556085 | 2.4:-2647842 | MS.gene89096:CDS |
| GATCTACCTCCTTTACGCCA+TGG | 0.556671 | 2.4:+2648651 | None:intergenic |
| CAATAAACCTTCAATGTCAA+AGG | 0.558692 | 2.4:-2646497 | MS.gene89096:CDS |
| CTTGCAAAATTGGATGTTGT+GGG | 0.560366 | 2.4:-2646523 | MS.gene89096:CDS |
| GCTTGCAAAATTGGATGTTG+TGG | 0.569859 | 2.4:-2646524 | MS.gene89096:CDS |
| TTGGGAGAGTAACTGAGGAC+TGG | 0.572129 | 2.4:-2646573 | MS.gene89096:CDS |
| AGGATAAAGTCTTATATGCA+AGG | 0.572773 | 2.4:+2646275 | None:intergenic |
| TGTTGAAGGAGAGCCTTCAA+AGG | 0.574537 | 2.4:-2648021 | MS.gene89096:CDS |
| GACTACTTCCATAAAATCAA+AGG | 0.576252 | 2.4:-2647997 | MS.gene89096:intron |
| ATGACTTCAAAAGAAGATGA+TGG | 0.581741 | 2.4:-2650412 | MS.gene89096:CDS |
| TGATGATACAATCGAGATGA+CGG | 0.585128 | 2.4:-2646311 | MS.gene89096:CDS |
| ATTTGAATAAAACAATTCAG+TGG | 0.592039 | 2.4:-2647809 | MS.gene89096:CDS |
| GCCTTCTGAAGTGAAGAAGT+GGG | 0.595508 | 2.4:-2647841 | MS.gene89096:CDS |
| AGATCACATGAAGTCAATGA+AGG | 0.603097 | 2.4:-2648633 | MS.gene89096:intron |
| AATGGGAGCAGAGTATAAGC+AGG | 0.603134 | 2.4:-2649745 | MS.gene89096:CDS |
| TGCAGGAGTGTTACAGCCAG+AGG | 0.610409 | 2.4:-2648716 | MS.gene89096:CDS |
| GCAAGCTCCTCAACAACTCG+AGG | 0.615189 | 2.4:+2646541 | None:intergenic |
| TTATGCATGCTGGGAAACCA+TGG | 0.623179 | 2.4:-2648668 | MS.gene89096:CDS |
| TCAAAAGAAGATGATGGTCA+CGG | 0.624811 | 2.4:-2650406 | MS.gene89096:CDS |
| GGGAAACCATGGCGTAAAGG+AGG | 0.628797 | 2.4:-2648657 | MS.gene89096:CDS |
| AGATGCCATATGTTCTCTCG+AGG | 0.652619 | 2.4:-2647427 | MS.gene89096:CDS |
| AGACCAACTTTGGATGAAGG+TGG | 0.656003 | 2.4:-2650370 | MS.gene89096:CDS |
| GGACATTGGGAGAGTAACTG+AGG | 0.703411 | 2.4:-2646578 | MS.gene89096:CDS |
| GGACTGCAAATGTATTTACG+AGG | 0.711362 | 2.4:-2646452 | MS.gene89096:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATATAATTTGAGAAAAA+TGG | - | chr2.4:2648749-2648768 | MS.gene89096:intron | 10.0% |
| !!! | ATTTTTTTAACAAATGAATT+TGG | + | chr2.4:2649059-2649078 | None:intergenic | 10.0% |
| !! | CACTTATTTATATATATCTT+TGG | + | chr2.4:2648486-2648505 | None:intergenic | 15.0% |
| !! | TAATTGATTAAGTTTATGTT+TGG | - | chr2.4:2646442-2646461 | MS.gene89096:CDS | 15.0% |
| !!! | AAAGAAAAAAATGTTGTTTT+TGG | - | chr2.4:2648321-2648340 | MS.gene89096:intron | 15.0% |
| !!! | TAGTTTCAATTTTAATTCTA+CGG | + | chr2.4:2647358-2647377 | None:intergenic | 15.0% |
| !! | AAATAAGTGCAAAATTGTAA+GGG | - | chr2.4:2648497-2648516 | MS.gene89096:intron | 20.0% |
| !! | AATGTACAATAACTTAAACT+AGG | + | chr2.4:2648124-2648143 | None:intergenic | 20.0% |
| !! | ACAATCGACAAATAAAATAA+AGG | + | chr2.4:2648785-2648804 | None:intergenic | 20.0% |
| !! | AGGTTATTAATTCATTAAAC+TGG | - | chr2.4:2646847-2646866 | MS.gene89096:intron | 20.0% |
| !! | ATAAAATCAAAGGTAAAAGT+TGG | - | chr2.4:2648710-2648729 | MS.gene89096:CDS | 20.0% |
| !! | ATTTGAATAAAACAATTCAG+TGG | - | chr2.4:2648888-2648907 | MS.gene89096:intron | 20.0% |
| !! | TAAATAAGTGCAAAATTGTA+AGG | - | chr2.4:2648496-2648515 | MS.gene89096:intron | 20.0% |
| !!! | AAAGGTCTTTAAGTAATTTT+AGG | + | chr2.4:2648424-2648443 | None:intergenic | 20.0% |
| !!! | AACTTTTACCTTTGATTTTA+TGG | + | chr2.4:2648711-2648730 | None:intergenic | 20.0% |
| !!! | AAGTTTTAAACACACAAAAA+AGG | + | chr2.4:2648442-2648461 | None:intergenic | 20.0% |
| !!! | AATATAAGCAGTACTTTTAA+AGG | + | chr2.4:2647124-2647143 | None:intergenic | 20.0% |
| !!! | AGTTTCAATTTTAATTCTAC+GGG | + | chr2.4:2647357-2647376 | None:intergenic | 20.0% |
| !!! | ATTTAATCATTTTCTTTTCC+TGG | - | chr2.4:2649354-2649373 | MS.gene89096:intron | 20.0% |
| !!! | GTATCCTTTATTTTGTTTTT+GGG | - | chr2.4:2647945-2647964 | MS.gene89096:intron | 20.0% |
| !!! | GTTTTTGTTGACAAAATATA+TGG | + | chr2.4:2647915-2647934 | None:intergenic | 20.0% |
| !!! | TAAAAGTACTGCTTATATTT+TGG | - | chr2.4:2647125-2647144 | MS.gene89096:intron | 20.0% |
| !!! | TAATTCATTAAACTGGTTTA+TGG | - | chr2.4:2646854-2646873 | MS.gene89096:intron | 20.0% |
| !!! | TATAATCTCATTTTTCTTTG+TGG | - | chr2.4:2647433-2647452 | MS.gene89096:CDS | 20.0% |
| !!! | TATTTTACTTGAATGAGAAT+TGG | - | chr2.4:2649817-2649836 | MS.gene89096:CDS | 20.0% |
| !!! | TCAATATATTTTGCAGATAA+TGG | + | chr2.4:2648380-2648399 | None:intergenic | 20.0% |
| !!! | TGCTGTTTTTTTACTAATAT+TGG | - | chr2.4:2647783-2647802 | MS.gene89096:intron | 20.0% |
| !!! | TGTATCCTTTATTTTGTTTT+TGG | - | chr2.4:2647944-2647963 | MS.gene89096:intron | 20.0% |
| !!! | TGTTTTTTTACTAATATTGG+TGG | - | chr2.4:2647786-2647805 | MS.gene89096:intron | 20.0% |
| !!! | TTGAGAATTTAGTTTTACAT+AGG | + | chr2.4:2649181-2649200 | None:intergenic | 20.0% |
| !!! | TTTAATCATTTTCTTTTCCT+GGG | - | chr2.4:2649355-2649374 | MS.gene89096:intron | 20.0% |
| ! | AAAACTAAAATCTACATGCA+AGG | + | chr2.4:2649404-2649423 | None:intergenic | 25.0% |
| ! | AAAGTTCAAAATGAAAATGC+TGG | - | chr2.4:2646390-2646409 | MS.gene89096:CDS | 25.0% |
| ! | AACACCCAAAAACAAAATAA+AGG | + | chr2.4:2647952-2647971 | None:intergenic | 25.0% |
| ! | ACAAAATAAAGGATACATCA+TGG | + | chr2.4:2647941-2647960 | None:intergenic | 25.0% |
| ! | AGAATAACAAACCATACAAT+AGG | + | chr2.4:2647212-2647231 | None:intergenic | 25.0% |
| ! | ATCTATGTCTTATACTTCTT+AGG | - | chr2.4:2647182-2647201 | MS.gene89096:intron | 25.0% |
| ! | CAAAGATAAATGAAGAACAT+AGG | - | chr2.4:2650307-2650326 | MS.gene89096:intron | 25.0% |
| ! | CATGTAACAAGTTAAAAGAA+AGG | + | chr2.4:2647080-2647099 | None:intergenic | 25.0% |
| ! | CTGTTATATCAAGGATTAAA+TGG | - | chr2.4:2650048-2650067 | MS.gene89096:intron | 25.0% |
| ! | GAATAACAAACCATACAATA+GGG | + | chr2.4:2647211-2647230 | None:intergenic | 25.0% |
| ! | GTTAGAAAAGAAAAGAACAA+CGG | + | chr2.4:2647685-2647704 | None:intergenic | 25.0% |
| ! | GTTGTAAAAATTAAGTGCAA+AGG | + | chr2.4:2649720-2649739 | None:intergenic | 25.0% |
| ! | TAAGTTTATGTTTGGTATCA+CGG | - | chr2.4:2646450-2646469 | MS.gene89096:CDS | 25.0% |
| ! | TGTGTAAAGCCAAATATAAA+TGG | + | chr2.4:2649976-2649995 | None:intergenic | 25.0% |
| ! | TGTTATATACGAAATGATTG+AGG | + | chr2.4:2648168-2648187 | None:intergenic | 25.0% |
| ! | TTAAAGTAAGAATACCAAGA+TGG | + | chr2.4:2650014-2650033 | None:intergenic | 25.0% |
| ! | TTAAATTTAACCAGGACATT+GGG | - | chr2.4:2650106-2650125 | MS.gene89096:intron | 25.0% |
| ! | TTCAAGTAAAATATCCAGTA+TGG | + | chr2.4:2649810-2649829 | None:intergenic | 25.0% |
| ! | TTGTACAGTCCATTTATATT+TGG | - | chr2.4:2649964-2649983 | MS.gene89096:intron | 25.0% |
| ! | TTGTATGCTAGTAAATTGAT+AGG | - | chr2.4:2648097-2648116 | MS.gene89096:intron | 25.0% |
| !! | AAATTAGGGATATTTTGTCT+TGG | - | chr2.4:2647608-2647627 | MS.gene89096:intron | 25.0% |
| !! | ACTTAATTTTTACAACAGGA+TGG | - | chr2.4:2649724-2649743 | MS.gene89096:CDS | 25.0% |
| !! | AGCATTTTCATTTTGAACTT+TGG | + | chr2.4:2646391-2646410 | None:intergenic | 25.0% |
| !! | CTTACTTTAAGTTTCAATGT+GGG | - | chr2.4:2650024-2650043 | MS.gene89096:intron | 25.0% |
| !! | TATATCTTTGGTGATAAAGA+TGG | + | chr2.4:2648474-2648493 | None:intergenic | 25.0% |
| !! | TCTTACTTTAAGTTTCAATG+TGG | - | chr2.4:2650023-2650042 | MS.gene89096:intron | 25.0% |
| !! | TTACTTTAAGTTTCAATGTG+GGG | - | chr2.4:2650025-2650044 | MS.gene89096:intron | 25.0% |
| !! | TTCTAACTTCATTTTGTTCA+AGG | - | chr2.4:2649142-2649161 | MS.gene89096:intron | 25.0% |
| !! | TTGCACTTAATTTTTACAAC+AGG | - | chr2.4:2649720-2649739 | MS.gene89096:CDS | 25.0% |
| !! | TTGTAGCTTTTACAAAATCA+CGG | + | chr2.4:2646574-2646593 | None:intergenic | 25.0% |
| !! | TTGTCTTGTTAAATTTAACC+AGG | - | chr2.4:2650098-2650117 | MS.gene89096:intron | 25.0% |
| !!! | GTCATTTTATTAATGTCTCA+TGG | - | chr2.4:2647270-2647289 | MS.gene89096:intron | 25.0% |
| !!! | TCTTTTCTCTCTTATTTTTC+TGG | - | chr2.4:2648279-2648298 | MS.gene89096:intron | 25.0% |
| !!! | TTATTTTGTTTTTGGGTGTT+AGG | - | chr2.4:2647952-2647971 | MS.gene89096:intron | 25.0% |
| !!! | TTTAACTTGTTACATGTGAA+TGG | - | chr2.4:2647084-2647103 | MS.gene89096:intron | 25.0% |
| AAAATTAAGTGCAAAGGTTC+TGG | + | chr2.4:2649714-2649733 | None:intergenic | 30.0% | |
| AATACATTCCCAAGAAAGAT+AGG | + | chr2.4:2649548-2649567 | None:intergenic | 30.0% | |
| ATAACAAAAATAGCTGCAGA+AGG | - | chr2.4:2649229-2649248 | MS.gene89096:intron | 30.0% | |
| ATATCTTCCTTTGACATTGA+AGG | + | chr2.4:2650210-2650229 | None:intergenic | 30.0% | |
| ATCAGACTAATAATAGATGC+AGG | - | chr2.4:2649460-2649479 | MS.gene89096:intron | 30.0% | |
| ATGACTTCAAAAGAAGATGA+TGG | - | chr2.4:2646285-2646304 | MS.gene89096:CDS | 30.0% | |
| ATGAGAATTGGCAAATCATT+TGG | - | chr2.4:2649829-2649848 | MS.gene89096:intron | 30.0% | |
| CAATAAACCTTCAATGTCAA+AGG | - | chr2.4:2650200-2650219 | MS.gene89096:intron | 30.0% | |
| GAATAAAACAATTCAGTGGT+TGG | - | chr2.4:2648892-2648911 | MS.gene89096:intron | 30.0% | |
| GACATTGAAGGATATCTTAA+TGG | + | chr2.4:2649885-2649904 | None:intergenic | 30.0% | |
| GACTACTTCCATAAAATCAA+AGG | - | chr2.4:2648700-2648719 | MS.gene89096:CDS | 30.0% | |
| GGAAAAAACCTTTGATACAA+TGG | + | chr2.4:2647059-2647078 | None:intergenic | 30.0% | |
| GGAAATATTAGATGTGAAAC+TGG | + | chr2.4:2648594-2648613 | None:intergenic | 30.0% | |
| GTATAAGACATAGATTCTTG+AGG | + | chr2.4:2647177-2647196 | None:intergenic | 30.0% | |
| GTCTGGATTATGTAACAAAT+AGG | + | chr2.4:2647761-2647780 | None:intergenic | 30.0% | |
| GTTAAATTTAACCAGGACAT+TGG | - | chr2.4:2650105-2650124 | MS.gene89096:intron | 30.0% | |
| GTTTCTTATTAGTGCATGTT+TGG | + | chr2.4:2646776-2646795 | None:intergenic | 30.0% | |
| TAACAAAAATAGCTGCAGAA+GGG | - | chr2.4:2649230-2649249 | MS.gene89096:intron | 30.0% | |
| TATAATTAGTCGGCATCATT+AGG | + | chr2.4:2649771-2649790 | None:intergenic | 30.0% | |
| TCAGACTAATAATAGATGCA+GGG | - | chr2.4:2649461-2649480 | MS.gene89096:intron | 30.0% | |
| TTCCTCAATGAAGGAAATTA+GGG | - | chr2.4:2647594-2647613 | MS.gene89096:intron | 30.0% | |
| TTTACGAGGAAGAACTAAAT+AGG | - | chr2.4:2650259-2650278 | MS.gene89096:intron | 30.0% | |
| TTTCCTCAATGAAGGAAATT+AGG | - | chr2.4:2647593-2647612 | MS.gene89096:intron | 30.0% | |
| ! | AAACTGATTGTGACTTGTAT+TGG | - | chr2.4:2649317-2649336 | MS.gene89096:intron | 30.0% |
| ! | AATGATGCCGACTAATTATA+AGG | - | chr2.4:2649771-2649790 | MS.gene89096:CDS | 30.0% |
| ! | AATGTTTCTGTTCATTCTAG+AGG | - | chr2.4:2648960-2648979 | MS.gene89096:intron | 30.0% |
| ! | AGACATTAAGTTTTTGCTTG+AGG | - | chr2.4:2647640-2647659 | MS.gene89096:intron | 30.0% |
| ! | AGAGATTAGTTGAGACATAA+TGG | - | chr2.4:2647565-2647584 | MS.gene89096:intron | 30.0% |
| ! | AGGATAAAGTCTTATATGCA+AGG | + | chr2.4:2650425-2650444 | None:intergenic | 30.0% |
| ! | ATTGTTTGCTACATATTCCA+GGG | - | chr2.4:2648800-2648819 | MS.gene89096:intron | 30.0% |
| ! | CTGTACCTTTTACAAAATCA+CGG | + | chr2.4:2646629-2646648 | None:intergenic | 30.0% |
| ! | TTAAGTTTTTGCTTGAGGAA+AGG | - | chr2.4:2647645-2647664 | MS.gene89096:intron | 30.0% |
| ! | TTCTGGAGAAAACTATGTTA+GGG | + | chr2.4:2649697-2649716 | None:intergenic | 30.0% |
| !! | GTACTGCTTATATTTTGGAA+AGG | - | chr2.4:2647130-2647149 | MS.gene89096:intron | 30.0% |
| !! | GTTTGCATTGTTGTTTAATG+AGG | - | chr2.4:2646827-2646846 | MS.gene89096:intron | 30.0% |
| !! | TATTTTGGAAAGGATAGAAG+TGG | - | chr2.4:2647140-2647159 | MS.gene89096:intron | 30.0% |
| !! | TGATAAATGCTTTAGAAGCA+AGG | - | chr2.4:2649108-2649127 | MS.gene89096:intron | 30.0% |
| !! | TGCTTCTAAAGCATTTATCA+CGG | + | chr2.4:2649108-2649127 | None:intergenic | 30.0% |
| !! | TTTGTTATTCTCACTACTTG+TGG | - | chr2.4:2647221-2647240 | MS.gene89096:intron | 30.0% |
| !!! | ACCACTTTTTAGATTTTGGT+GGG | - | chr2.4:2647847-2647866 | MS.gene89096:CDS | 30.0% |
| !!! | GCTATTTTTGTTATCTCACT+TGG | + | chr2.4:2649223-2649242 | None:intergenic | 30.0% |
| !!! | GCTTACCACTTTTTAGATTT+TGG | - | chr2.4:2647843-2647862 | MS.gene89096:CDS | 30.0% |
| !!! | TACCACTTTTTAGATTTTGG+TGG | - | chr2.4:2647846-2647865 | MS.gene89096:CDS | 30.0% |
| !!! | TAGTAACGTTACACTGATTT+TGG | - | chr2.4:2647877-2647896 | MS.gene89096:CDS | 30.0% |
| AAGCAGCTTTCGAAAAATCA+CGG | + | chr2.4:2646503-2646522 | None:intergenic | 35.0% | |
| ACTCACGCATAAATTTCATG+AGG | + | chr2.4:2648615-2648634 | None:intergenic | 35.0% | |
| AGAAGCCAATTAAGATTGCA+TGG | - | chr2.4:2648205-2648224 | MS.gene89096:intron | 35.0% | |
| AGATCACATGAAGTCAATGA+AGG | - | chr2.4:2648064-2648083 | MS.gene89096:intron | 35.0% | |
| AGCAATTTGCCTATCTTTCT+TGG | - | chr2.4:2649536-2649555 | MS.gene89096:intron | 35.0% | |
| AGTAAAAAAACAGCATCGTC+TGG | + | chr2.4:2647778-2647797 | None:intergenic | 35.0% | |
| ATAGTTACCTTATGCATGCT+GGG | - | chr2.4:2648020-2648039 | MS.gene89096:CDS | 35.0% | |
| ATCCAAGTAGTAAGCAATAC+TGG | + | chr2.4:2649634-2649653 | None:intergenic | 35.0% | |
| ATCCCTAATTTCCTTCATTG+AGG | + | chr2.4:2647599-2647618 | None:intergenic | 35.0% | |
| CTTGCAAAATTGGATGTTGT+GGG | - | chr2.4:2650174-2650193 | MS.gene89096:intron | 35.0% | |
| GAAGAACATAGGAGCAAAAA+TGG | - | chr2.4:2650318-2650337 | MS.gene89096:intron | 35.0% | |
| GCAATTTGCCTATCTTTCTT+GGG | - | chr2.4:2649537-2649556 | MS.gene89096:intron | 35.0% | |
| GTGAGAAATCCAGTGAAATT+GGG | - | chr2.4:2646349-2646368 | MS.gene89096:CDS | 35.0% | |
| GTTGGAAAGTCAAGAAGAAA+AGG | - | chr2.4:2648910-2648929 | MS.gene89096:intron | 35.0% | |
| TAAAAGCTACAATGCCAAAG+TGG | - | chr2.4:2646582-2646601 | MS.gene89096:intron | 35.0% | |
| TAAGCTTTCAGAACTTGCAT+AGG | - | chr2.4:2648996-2649015 | MS.gene89096:intron | 35.0% | |
| TCCCACCAAAATCTAAAAAG+TGG | + | chr2.4:2647851-2647870 | None:intergenic | 35.0% | |
| TCTTAGGAATCCCTATTGTA+TGG | - | chr2.4:2647198-2647217 | MS.gene89096:intron | 35.0% | |
| TGATGATACAATCGAGATGA+CGG | - | chr2.4:2650386-2650405 | MS.gene89096:CDS | 35.0% | |
| TGTTAGGGACAAAAAAAGCT+AGG | + | chr2.4:2649682-2649701 | None:intergenic | 35.0% | |
| TTCTGACTTCAACAAGCTTA+TGG | - | chr2.4:2646419-2646438 | MS.gene89096:CDS | 35.0% | |
| TTGTGGAACCATTGTATCAA+AGG | - | chr2.4:2647048-2647067 | MS.gene89096:intron | 35.0% | |
| ! | AAACCACAAAAGCATGTTGA+AGG | - | chr2.4:2648662-2648681 | MS.gene89096:CDS | 35.0% |
| ! | AAGTAGCAGTTGTGTGTTTT+TGG | - | chr2.4:2646800-2646819 | MS.gene89096:intron | 35.0% |
| ! | ACGGAGCTTTTGTAAAATCA+GGG | - | chr2.4:2646715-2646734 | MS.gene89096:intron | 35.0% |
| ! | ACTCAGGCCTTATAATTAGT+CGG | + | chr2.4:2649781-2649800 | None:intergenic | 35.0% |
| ! | AGTAGCAGTTGTGTGTTTTT+GGG | - | chr2.4:2646801-2646820 | MS.gene89096:intron | 35.0% |
| ! | ATCTAAGATGCAAGTCACAA+AGG | + | chr2.4:2648240-2648259 | None:intergenic | 35.0% |
| ! | CATTAAACTGGTTTATGGAC+AGG | - | chr2.4:2646859-2646878 | MS.gene89096:intron | 35.0% |
| ! | GAACTCTAATTGCACTCTTT+TGG | - | chr2.4:2646979-2646998 | MS.gene89096:intron | 35.0% |
| ! | GATTGTTTGCTACATATTCC+AGG | - | chr2.4:2648799-2648818 | MS.gene89096:intron | 35.0% |
| ! | TAGCTTTTACAAAATCACGG+TGG | + | chr2.4:2646571-2646590 | None:intergenic | 35.0% |
| ! | TATTAGCTGGTTCAAGTTTG+AGG | + | chr2.4:2647385-2647404 | None:intergenic | 35.0% |
| ! | TCAAAAGAAGATGATGGTCA+CGG | - | chr2.4:2646291-2646310 | MS.gene89096:CDS | 35.0% |
| ! | TGGTTTTCTTTCCTCAATGA+AGG | - | chr2.4:2647585-2647604 | MS.gene89096:intron | 35.0% |
| ! | TGTCACCGTGATTTTGTAAA+AGG | - | chr2.4:2646621-2646640 | MS.gene89096:intron | 35.0% |
| ! | TTGAACTTTGGTCTTCTTGT+TGG | + | chr2.4:2646379-2646398 | None:intergenic | 35.0% |
| ! | TTTGTTATCTCACTTGGATC+TGG | + | chr2.4:2649217-2649236 | None:intergenic | 35.0% |
| ! | TTTTTCCTCGAGAGAACATA+TGG | + | chr2.4:2649278-2649297 | None:intergenic | 35.0% |
| !! | AACATGCTTTTGTGGTTTGT+GGG | + | chr2.4:2648660-2648679 | None:intergenic | 35.0% |
| !! | GTTCTGGAGAAAACTATGTT+AGG | + | chr2.4:2649698-2649717 | None:intergenic | 35.0% |
| !! | TAATAGCCAAGAAGGTACTA+GGG | - | chr2.4:2647400-2647419 | MS.gene89096:intron | 35.0% |
| !! | TTTTGGAAAGAGACCAACTT+TGG | - | chr2.4:2646317-2646336 | MS.gene89096:CDS | 35.0% |
| !!! | TCTTTTGAAGTCATCCATGA+TGG | + | chr2.4:2646279-2646298 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGGGTGTTAGGAT+TGG | - | chr2.4:2647957-2647976 | MS.gene89096:intron | 35.0% |
| AAAGTGGCTATGCGAAATCA+CGG | - | chr2.4:2646598-2646617 | MS.gene89096:intron | 40.0% | |
| AAGAGACCAACTTTGGATGA+AGG | - | chr2.4:2646324-2646343 | MS.gene89096:CDS | 40.0% | |
| AAGCTAGGATGGCAATGATT+AGG | + | chr2.4:2649667-2649686 | None:intergenic | 40.0% | |
| AATGTGGGGCTGTTATATCA+AGG | - | chr2.4:2650039-2650058 | MS.gene89096:intron | 40.0% | |
| ACAAATGCTGCATCTTCTTC+TGG | - | chr2.4:2650345-2650364 | MS.gene89096:CDS | 40.0% | |
| AGATATCCACAAACTAGCAC+TGG | - | chr2.4:2650224-2650243 | MS.gene89096:intron | 40.0% | |
| AGCTTCAACTTGTCGAAACT+TGG | + | chr2.4:2647026-2647045 | None:intergenic | 40.0% | |
| AGGGACAAAAAAAGCTAGGA+TGG | + | chr2.4:2649678-2649697 | None:intergenic | 40.0% | |
| ATGGAAGTAGTCTCCTTTGA+AGG | + | chr2.4:2648692-2648711 | None:intergenic | 40.0% | |
| ATGTTCTCTCGAGGAAAAAC+AGG | - | chr2.4:2649279-2649298 | MS.gene89096:intron | 40.0% | |
| CAATTTCAACGAGTTTCCTC+TGG | + | chr2.4:2648000-2648019 | None:intergenic | 40.0% | |
| CACCAGTATTGCTTACTACT+TGG | - | chr2.4:2649629-2649648 | MS.gene89096:intron | 40.0% | |
| CAGCTCCATGCAATCTTAAT+TGG | + | chr2.4:2648213-2648232 | None:intergenic | 40.0% | |
| CCAATTGTCAACGACATTGA+AGG | + | chr2.4:2649897-2649916 | None:intergenic | 40.0% | |
| CCTTCAATGTCGTTGACAAT+TGG | - | chr2.4:2649894-2649913 | MS.gene89096:intron | 40.0% | |
| GAAAAGACATTGACGATCCT+AGG | - | chr2.4:2648822-2648841 | MS.gene89096:intron | 40.0% | |
| GATAGTTACCTTATGCATGC+TGG | - | chr2.4:2648019-2648038 | MS.gene89096:CDS | 40.0% | |
| GCTTCAACTTGTCGAAACTT+GGG | + | chr2.4:2647025-2647044 | None:intergenic | 40.0% | |
| GCTTGCAAAATTGGATGTTG+TGG | - | chr2.4:2650173-2650192 | MS.gene89096:intron | 40.0% | |
| GGTGAGAAATCCAGTGAAAT+TGG | - | chr2.4:2646348-2646367 | MS.gene89096:CDS | 40.0% | |
| GTAAGAATACCAAGATGGCA+CGG | + | chr2.4:2650009-2650028 | None:intergenic | 40.0% | |
| TAATCCAAGCCTTTCACTGA+GGG | - | chr2.4:2647731-2647750 | MS.gene89096:intron | 40.0% | |
| TCCAGTATGGCTATATACTC+AGG | + | chr2.4:2649797-2649816 | None:intergenic | 40.0% | |
| TGTCATTCAGTGTGATGACT+CGG | + | chr2.4:2649855-2649874 | None:intergenic | 40.0% | |
| TGTTGAGGAGCTTGCAAAAT+TGG | - | chr2.4:2650164-2650183 | MS.gene89096:intron | 40.0% | |
| TTACTTATATTGCCACTCCC+AGG | + | chr2.4:2649375-2649394 | None:intergenic | 40.0% | |
| TTAGTGCGTGTTTGGTATCA+TGG | - | chr2.4:2646521-2646540 | MS.gene89096:CDS | 40.0% | |
| TTGGAAAGGATAGAAGTGGA+AGG | - | chr2.4:2647144-2647163 | MS.gene89096:intron | 40.0% | |
| TTTACAAAAGCTCCGTGCAT+TGG | + | chr2.4:2646711-2646730 | None:intergenic | 40.0% | |
| ! | AAACTGGTTTATGGACAGGA+AGG | - | chr2.4:2646863-2646882 | MS.gene89096:intron | 40.0% |
| ! | AGGTGTAGTTTTTGTGCTGT+CGG | - | chr2.4:2646883-2646902 | MS.gene89096:intron | 40.0% |
| ! | ATTCTTACCTCGAGTTGTTG+AGG | - | chr2.4:2650149-2650168 | MS.gene89096:intron | 40.0% |
| ! | CAACATGCTTTTGTGGTTTG+TGG | + | chr2.4:2648661-2648680 | None:intergenic | 40.0% |
| ! | CACGGAGCTTTTGTAAAATC+AGG | - | chr2.4:2646714-2646733 | MS.gene89096:intron | 40.0% |
| ! | GAGCTTTTGTAAAATCAGGG+TGG | - | chr2.4:2646718-2646737 | MS.gene89096:intron | 40.0% |
| ! | TAGCGTCAATTACTGACTGT+AGG | - | chr2.4:2647507-2647526 | MS.gene89096:intron | 40.0% |
| ! | TCATTTTCTTTTCCTGGGAG+TGG | - | chr2.4:2649360-2649379 | MS.gene89096:intron | 40.0% |
| ! | TCTCCTTCAACATGCTTTTG+TGG | + | chr2.4:2648668-2648687 | None:intergenic | 40.0% |
| ! | TGCTGTAGTGTCTTAGTTTG+CGG | - | chr2.4:2647534-2647553 | MS.gene89096:intron | 40.0% |
| ! | TTGAAGTCATCCATGATGGA+AGG | + | chr2.4:2646275-2646294 | None:intergenic | 40.0% |
| !! | ACATGCTTTTGTGGTTTGTG+GGG | + | chr2.4:2648659-2648678 | None:intergenic | 40.0% |
| !! | CTAATAGCCAAGAAGGTACT+AGG | - | chr2.4:2647399-2647418 | MS.gene89096:intron | 40.0% |
| !! | GATGATGGTCACGGAAATTT+TGG | - | chr2.4:2646300-2646319 | MS.gene89096:CDS | 40.0% |
| !! | TGTCGAAACTTGGGAGTATT+TGG | + | chr2.4:2647016-2647035 | None:intergenic | 40.0% |
| !!! | TGTTTTTGGAGCAGAATCAC+TGG | - | chr2.4:2648335-2648354 | MS.gene89096:intron | 40.0% |
| AAAGCTGCTTAGTGCGTGTT+TGG | - | chr2.4:2646513-2646532 | MS.gene89096:CDS | 45.0% | |
| AATCCAAGCCTTTCACTGAG+GGG | - | chr2.4:2647732-2647751 | MS.gene89096:intron | 45.0% | |
| AATGGGAGCAGAGTATAAGC+AGG | - | chr2.4:2646952-2646971 | MS.gene89096:intron | 45.0% | |
| ACGGTGGCTCAATGTGATTA+TGG | + | chr2.4:2646484-2646503 | None:intergenic | 45.0% | |
| AGACCAACTTTGGATGAAGG+TGG | - | chr2.4:2646327-2646346 | MS.gene89096:CDS | 45.0% | |
| AGATGCCATATGTTCTCTCG+AGG | - | chr2.4:2649270-2649289 | MS.gene89096:intron | 45.0% | |
| ATAGGATTCCCCTCAGTGAA+AGG | + | chr2.4:2647743-2647762 | None:intergenic | 45.0% | |
| ATGGTTTCCCAGCATGCATA+AGG | + | chr2.4:2648030-2648049 | None:intergenic | 45.0% | |
| ATTCTCACTACTTGTGGCGT+GGG | - | chr2.4:2647227-2647246 | MS.gene89096:intron | 45.0% | |
| CAGCTTTCGAAAAATCACGG+TGG | + | chr2.4:2646500-2646519 | None:intergenic | 45.0% | |
| CCAAGAGAAACCTTCCATCA+TGG | - | chr2.4:2646262-2646281 | MS.gene89096:CDS | 45.0% | |
| CTAATCCAAGCCTTTCACTG+AGG | - | chr2.4:2647730-2647749 | MS.gene89096:intron | 45.0% | |
| GAACCAGCTAATAGCCAAGA+AGG | - | chr2.4:2647392-2647411 | MS.gene89096:intron | 45.0% | |
| GCCTGAGTATATAGCCATAC+TGG | - | chr2.4:2649793-2649812 | MS.gene89096:CDS | 45.0% | |
| GTACCTTCTTGGCTATTAGC+TGG | + | chr2.4:2647398-2647417 | None:intergenic | 45.0% | |
| GTGATTTCGCATAGCCACTT+TGG | + | chr2.4:2646599-2646618 | None:intergenic | 45.0% | |
| GTTGGAAGACCCAATTTCAC+TGG | + | chr2.4:2646361-2646380 | None:intergenic | 45.0% | |
| TATTCTCACTACTTGTGGCG+TGG | - | chr2.4:2647226-2647245 | MS.gene89096:intron | 45.0% | |
| TCACAGGTGACACATCTTAG+AGG | + | chr2.4:2650445-2650464 | None:intergenic | 45.0% | |
| TCACCACCTTCATCCAAAGT+TGG | + | chr2.4:2646333-2646352 | None:intergenic | 45.0% | |
| TGTAAAATCAGGGTGGTTCG+CGG | - | chr2.4:2646725-2646744 | MS.gene89096:intron | 45.0% | |
| TGTTGAAGGAGAGCCTTCAA+AGG | - | chr2.4:2648676-2648695 | MS.gene89096:CDS | 45.0% | |
| TTATGCATGCTGGGAAACCA+TGG | - | chr2.4:2648029-2648048 | MS.gene89096:CDS | 45.0% | |
| ! | CCATGATGGAAGGTTTCTCT+TGG | + | chr2.4:2646265-2646284 | None:intergenic | 45.0% |
| ! | CGACAAGTTGAAGCTGATTG+TGG | - | chr2.4:2647031-2647050 | MS.gene89096:intron | 45.0% |
| ! | GAAGGCTCAAAGCATTTCCT+AGG | + | chr2.4:2648842-2648861 | None:intergenic | 45.0% |
| ! | GATCGTCAATGTCTTTTCCC+TGG | + | chr2.4:2648820-2648839 | None:intergenic | 45.0% |
| ! | GGTGTAGTTTTTGTGCTGTC+GGG | - | chr2.4:2646884-2646903 | MS.gene89096:intron | 45.0% |
| !! | AGCCTTCTGAAGTGAAGAAG+TGG | - | chr2.4:2648855-2648874 | MS.gene89096:intron | 45.0% |
| !! | GCCTTCTGAAGTGAAGAAGT+GGG | - | chr2.4:2648856-2648875 | MS.gene89096:intron | 45.0% |
| !! | TGTAGTGTCTTAGTTTGCGG+TGG | - | chr2.4:2647537-2647556 | MS.gene89096:intron | 45.0% |
| !!! | ATTTTTCAAATATTATTTAT+TGG | - | chr2.4:2647814-2647833 | MS.gene89096:CDS | 5.0% |
| AGGTCGCGTGCTATGGAAAT+GGG | - | chr2.4:2646935-2646954 | MS.gene89096:intron | 50.0% | |
| ATTCCCCTCAGTGAAAGGCT+TGG | + | chr2.4:2647738-2647757 | None:intergenic | 50.0% | |
| CAGTTACTCTCCCAATGTCC+TGG | + | chr2.4:2650119-2650138 | None:intergenic | 50.0% | |
| CCCACCATGATACCAATGCA+CGG | - | chr2.4:2646696-2646715 | MS.gene89096:intron | 50.0% | |
| CTCACTTGGATCTGGCTGAA+AGG | + | chr2.4:2649209-2649228 | None:intergenic | 50.0% | |
| GAGATGCCCTAGTACCTTCT+TGG | + | chr2.4:2647409-2647428 | None:intergenic | 50.0% | |
| GAGCAGAGTATAAGCAGGAC+TGG | - | chr2.4:2646957-2646976 | MS.gene89096:intron | 50.0% | |
| GAGGTTGGCAAACATGCATG+TGG | + | chr2.4:2648542-2648561 | None:intergenic | 50.0% | |
| GATCTACCTCCTTTACGCCA+TGG | + | chr2.4:2648049-2648068 | None:intergenic | 50.0% | |
| GCCCACTTCTTCACTTCAGA+AGG | + | chr2.4:2648860-2648879 | None:intergenic | 50.0% | |
| GGACATTGGGAGAGTAACTG+AGG | - | chr2.4:2650119-2650138 | MS.gene89096:intron | 50.0% | |
| GTCTGAATTCCGTGCCATCT+TGG | - | chr2.4:2649997-2650016 | MS.gene89096:intron | 50.0% | |
| GTGAAACTGGACCGAGACAA+CGG | + | chr2.4:2648581-2648600 | None:intergenic | 50.0% | |
| TGGGTGTTAGGATTGGATGC+AGG | - | chr2.4:2647964-2647983 | MS.gene89096:intron | 50.0% | |
| TTGGGAGAGTAACTGAGGAC+TGG | - | chr2.4:2650124-2650143 | MS.gene89096:intron | 50.0% | |
| ! | AGCTCCGTGCATTGGTATCA+TGG | + | chr2.4:2646703-2646722 | None:intergenic | 50.0% |
| ! | CCGTGCATTGGTATCATGGT+GGG | + | chr2.4:2646699-2646718 | None:intergenic | 50.0% |
| ! | TCCGTGCATTGGTATCATGG+TGG | + | chr2.4:2646700-2646719 | None:intergenic | 50.0% |
| ! | TGCAGTCCAGTGCTAGTTTG+TGG | + | chr2.4:2650233-2650252 | None:intergenic | 50.0% |
| ! | TGTGGTTTGTGGGGTACAGA+TGG | + | chr2.4:2648650-2648669 | None:intergenic | 50.0% |
| !! | GCTGTCGGGTTTTGTGAATC+CGG | - | chr2.4:2646898-2646917 | MS.gene89096:intron | 50.0% |
| AGGGTGGTTCGCGGTGATTT+GGG | - | chr2.4:2646734-2646753 | MS.gene89096:intron | 55.0% | |
| CAAGTCCCACACCGTTGTCT+CGG | - | chr2.4:2648567-2648586 | MS.gene89096:intron | 55.0% | |
| CATCTTGAGGTCGCGTGCTA+TGG | - | chr2.4:2646928-2646947 | MS.gene89096:intron | 55.0% | |
| GAGACAACGGTGTGGGACTT+GGG | + | chr2.4:2648568-2648587 | None:intergenic | 55.0% | |
| GAGGTCGCGTGCTATGGAAA+TGG | - | chr2.4:2646934-2646953 | MS.gene89096:intron | 55.0% | |
| GCAAGCTCCTCAACAACTCG+AGG | + | chr2.4:2650159-2650178 | None:intergenic | 55.0% | |
| GCTGGGAAACCATGGCGTAA+AGG | - | chr2.4:2648037-2648056 | MS.gene89096:CDS | 55.0% | |
| GGGAAACCATGGCGTAAAGG+AGG | - | chr2.4:2648040-2648059 | MS.gene89096:CDS | 55.0% | |
| !! | GGTTTTGTGAATCCGGAGCG+TGG | - | chr2.4:2646905-2646924 | MS.gene89096:intron | 55.0% |
| !! | TGCAGGAGTGTTACAGCCAG+AGG | - | chr2.4:2647981-2648000 | MS.gene89096:intron | 55.0% |
| ACTGGACCGAGACAACGGTG+TGG | + | chr2.4:2648576-2648595 | None:intergenic | 60.0% | |
| ATCCGGAGCGTGGCATCTTG+AGG | - | chr2.4:2646915-2646934 | MS.gene89096:intron | 60.0% | |
| CAACGGTGTGGGACTTGGGT+AGG | + | chr2.4:2648564-2648583 | None:intergenic | 60.0% | |
| CAGGGTGGTTCGCGGTGATT+TGG | - | chr2.4:2646733-2646752 | MS.gene89096:intron | 60.0% | |
| CGAGACAACGGTGTGGGACT+TGG | + | chr2.4:2648569-2648588 | None:intergenic | 60.0% | |
| CTGGACCGAGACAACGGTGT+GGG | + | chr2.4:2648575-2648594 | None:intergenic | 60.0% | |
| GACCTCAAGATGCCACGCTC+CGG | + | chr2.4:2646920-2646939 | None:intergenic | 60.0% | |
| GTGGGACTTGGGTAGGAGGT+TGG | + | chr2.4:2648557-2648576 | None:intergenic | 60.0% | |
| CGGTGTGGGACTTGGGTAGG+AGG | + | chr2.4:2648561-2648580 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 2646255 | 2650464 | 2646255 | ID=MS.gene89096 |
| chr2.4 | mRNA | 2646255 | 2650464 | 2646255 | ID=MS.gene89096.t1;Parent=MS.gene89096 |
| chr2.4 | exon | 2650327 | 2650464 | 2650327 | ID=MS.gene89096.t1.exon1;Parent=MS.gene89096.t1 |
| chr2.4 | CDS | 2650327 | 2650464 | 2650327 | ID=cds.MS.gene89096.t1;Parent=MS.gene89096.t1 |
| chr2.4 | exon | 2649650 | 2649838 | 2649650 | ID=MS.gene89096.t1.exon2;Parent=MS.gene89096.t1 |
| chr2.4 | CDS | 2649650 | 2649838 | 2649650 | ID=cds.MS.gene89096.t1;Parent=MS.gene89096.t1 |
| chr2.4 | exon | 2648634 | 2648745 | 2648634 | ID=MS.gene89096.t1.exon3;Parent=MS.gene89096.t1 |
| chr2.4 | CDS | 2648634 | 2648745 | 2648634 | ID=cds.MS.gene89096.t1;Parent=MS.gene89096.t1 |
| chr2.4 | exon | 2647998 | 2648080 | 2647998 | ID=MS.gene89096.t1.exon4;Parent=MS.gene89096.t1 |
| chr2.4 | CDS | 2647998 | 2648080 | 2647998 | ID=cds.MS.gene89096.t1;Parent=MS.gene89096.t1 |
| chr2.4 | exon | 2647788 | 2647898 | 2647788 | ID=MS.gene89096.t1.exon5;Parent=MS.gene89096.t1 |
| chr2.4 | CDS | 2647788 | 2647898 | 2647788 | ID=cds.MS.gene89096.t1;Parent=MS.gene89096.t1 |
| chr2.4 | exon | 2647419 | 2647505 | 2647419 | ID=MS.gene89096.t1.exon6;Parent=MS.gene89096.t1 |
| chr2.4 | CDS | 2647419 | 2647505 | 2647419 | ID=cds.MS.gene89096.t1;Parent=MS.gene89096.t1 |
| chr2.4 | exon | 2646255 | 2646599 | 2646255 | ID=MS.gene89096.t1.exon7;Parent=MS.gene89096.t1 |
| chr2.4 | CDS | 2646255 | 2646599 | 2646255 | ID=cds.MS.gene89096.t1;Parent=MS.gene89096.t1 |
| Gene Sequence |
| Protein sequence |
