AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001930.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001930.01.T01 MTR_1g046740 98.214 168 3 0 82 249 272 439 4.29e-120 350
MsG0180001930.01.T01 MTR_1g046740 95.122 41 2 0 41 81 167 207 4.30e-18 83.2
MsG0180001930.01.T01 MTR_6g011080 46.784 171 88 2 82 249 263 433 1.20e-47 163
MsG0180001930.01.T01 MTR_4g022240 43.529 170 93 2 82 248 249 418 9.85e-44 152
MsG0180001930.01.T01 MTR_1g108280 42.623 183 97 5 71 248 217 396 1.78e-43 151
MsG0180001930.01.T01 MTR_2g085300 45.238 168 88 2 82 248 259 423 8.25e-42 147
MsG0180001930.01.T01 MTR_0072s0020 42.690 171 93 4 82 249 265 433 8.86e-41 145
MsG0180001930.01.T01 MTR_4g008010 38.235 170 102 1 82 248 237 406 1.35e-36 134
MsG0180001930.01.T01 MTR_7g086720 40.000 170 99 2 82 248 229 398 1.93e-36 133
MsG0180001930.01.T01 MTR_6g027550 38.150 173 101 2 82 248 144 316 3.80e-35 128
MsG0180001930.01.T01 MTR_0662s0030 40.000 130 75 2 74 202 146 273 4.96e-26 103
MsG0180001930.01.T01 MTR_4g114140 40.000 130 75 2 74 202 245 372 1.41e-25 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001930.01.T01 AT3G24040 58.480 171 68 2 82 249 245 415 1.60e-66 212
MsG0180001930.01.T01 AT3G24040 71.795 39 11 0 43 81 142 180 3.71e-11 62.8
MsG0180001930.01.T01 AT5G39990 48.824 170 84 2 82 248 277 446 8.12e-51 172
MsG0180001930.01.T01 AT5G15050 47.647 170 86 2 82 248 264 433 2.28e-48 165
MsG0180001930.01.T01 AT1G03520 47.059 170 85 4 82 248 190 357 7.09e-48 162
MsG0180001930.01.T01 AT1G03520 47.059 170 85 4 82 248 279 446 6.30e-47 162
MsG0180001930.01.T01 AT4G27480 42.857 168 92 2 82 248 256 420 7.72e-43 150
MsG0180001930.01.T01 AT4G27480 42.857 168 92 2 82 248 256 420 7.72e-43 150
MsG0180001930.01.T01 AT4G27480 42.857 168 92 2 82 248 256 420 7.72e-43 150
MsG0180001930.01.T01 AT1G71070 41.758 182 99 4 71 248 216 394 8.54e-43 150
MsG0180001930.01.T01 AT4G03340 43.353 173 87 5 82 248 257 424 2.86e-40 144
MsG0180001930.01.T01 AT4G03340 43.353 173 87 5 82 248 280 447 4.47e-40 144
MsG0180001930.01.T01 AT1G53100 39.645 169 97 3 83 249 258 423 5.39e-35 129
MsG0180001930.01.T01 AT3G15350 41.765 170 93 3 82 248 257 423 5.58e-35 129
MsG0180001930.01.T01 AT3G15350 41.765 170 93 3 82 248 257 423 5.58e-35 129
MsG0180001930.01.T01 AT1G53100 41.558 154 85 3 83 234 258 408 2.48e-32 122
MsG0180001930.01.T01 AT2G37585 37.725 167 88 1 82 248 233 383 3.40e-31 119
MsG0180001930.01.T01 AT3G03690 42.424 132 70 3 66 193 212 341 2.77e-26 105

Find 61 sgRNAs with CRISPR-Local

Find 531 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTTGTGTGACAGCATTTA+AGG 0.154032 1:+29510262 None:intergenic
TTATGACTGTCTTGTTAAAT+TGG 0.240979 1:+29510866 None:intergenic
TAGAATTTAATGTGGCTATA+TGG 0.290946 1:-29510316 MsG0180001930.01.T01:three_prime_UTR
ATCGTTCTTATCGATCCTTT+TGG 0.304556 1:+29510450 None:intergenic
AACAAACATATCATGCTATA+TGG 0.323133 1:+29510289 None:intergenic
GAGAACTGTAGGGAAATAAT+TGG 0.325793 1:+29510900 None:intergenic
GTTCCTGGTGGATGGTGTTT+AGG 0.351881 1:-29510664 MsG0180001930.01.T01:CDS
GGATGGTGTTTAGGTGAGCC+TGG 0.369627 1:-29510655 MsG0180001930.01.T01:CDS
TTTGATAACATGATTAATAG+TGG 0.383556 1:-29510775 MsG0180001930.01.T01:CDS
AAGTCGTTTAGAGCCTTTAC+CGG 0.384864 1:+29510588 None:intergenic
TACCCTCTTGTTACTCAAGA+TGG 0.419058 1:-29515058 MsG0180001930.01.T01:intron
CCGATCTCGACAATGTATAT+AGG 0.421011 1:-29510527 MsG0180001930.01.T01:exon
TGGTCCTTAGTTTATCTAGT+GGG 0.421403 1:-29510413 MsG0180001930.01.T01:three_prime_UTR
AGTCCTGGATCAATTGTTCC+TGG 0.425422 1:-29510679 MsG0180001930.01.T01:CDS
GTGGTCGAAGATTGTTTCTA+TGG 0.431015 1:+29510812 None:intergenic
GCATGAAGAGTAAACGAAAC+AGG 0.439879 1:+29515145 None:intergenic
GATTCGTTTGTCTTTGAGAT+GGG 0.442677 1:-29515110 MsG0180001930.01.T01:CDS
AGATCGAGAACAGGATCATC+TGG 0.449079 1:+29510727 None:intergenic
TGGTCGATGAGATCGAGAAC+AGG 0.459004 1:+29510718 None:intergenic
TAACAAGACAGTCATAAATC+AGG 0.472591 1:-29510860 MsG0180001930.01.T01:CDS
TGATTCGTTTGTCTTTGAGA+TGG 0.472897 1:-29515111 MsG0180001930.01.T01:CDS
CTGTAGGGAAATAATTGGAC+AGG 0.475869 1:+29510905 None:intergenic
GTTTGTCTTTGAGATGGGAT+TGG 0.482757 1:-29515105 MsG0180001930.01.T01:CDS
AAATAATTGGACAGGGATGA+TGG 0.483720 1:+29510913 None:intergenic
TTTACCGGGTCTCAAGATAC+TGG 0.484406 1:+29510603 None:intergenic
GTTAAGCATGTGCTGTTCCC+AGG 0.487262 1:+29510637 None:intergenic
TACATTATGTGACATGAGGC+TGG 0.504536 1:+29510492 None:intergenic
ATTGTTGAATTGCTGTCAAA+TGG 0.507843 1:-29510556 MsG0180001930.01.T01:CDS
CGAGAGTTGCAGAGAACTGT+AGG 0.509069 1:+29510889 None:intergenic
TATATTATGCTTATAAGATA+AGG 0.509604 1:+29517929 None:intergenic
CCTATATACATTGTCGAGAT+CGG 0.513723 1:+29510527 None:intergenic
AGTCGTTTAGAGCCTTTACC+GGG 0.527374 1:+29510589 None:intergenic
GATGGTGTTTAGGTGAGCCT+GGG 0.527992 1:-29510654 MsG0180001930.01.T01:CDS
CTACCCCACTAGATAAACTA+AGG 0.528361 1:+29510409 None:intergenic
AAATGCTGTCACACAAACTC+TGG 0.531352 1:-29510258 MsG0180001930.01.T01:three_prime_UTR
CGAGAACAGGATCATCTGGC+TGG 0.531647 1:+29510731 None:intergenic
GATCAATTGTTCCTGGTGGA+TGG 0.536959 1:-29510672 MsG0180001930.01.T01:CDS
GGAACAGCACATGCTTAACA+TGG 0.539344 1:-29510633 MsG0180001930.01.T01:CDS
AACGATATGAATCAACTGCT+TGG 0.546257 1:-29510433 MsG0180001930.01.T01:three_prime_UTR
TAGGAGTAGACAACCTCCCT+CGG 0.548900 1:-29510963 MsG0180001930.01.T01:CDS
TCAAAATCTGTTGAATTGAG+TGG 0.549042 1:+29510793 None:intergenic
AGTATCTTGAGACCCGGTAA+AGG 0.556734 1:-29510601 MsG0180001930.01.T01:CDS
TCTTATAAGCATAATATACA+TGG 0.568003 1:-29517924 MsG0180001930.01.T01:intron
CCACCAGGAACAATTGATCC+AGG 0.574115 1:+29510676 None:intergenic
GGTCCTTAGTTTATCTAGTG+GGG 0.576866 1:-29510412 MsG0180001930.01.T01:three_prime_UTR
GAACAATTGATCCAGGACTT+CGG 0.576978 1:+29510683 None:intergenic
TTGGTCCTTAGTTTATCTAG+TGG 0.580049 1:-29510414 MsG0180001930.01.T01:three_prime_UTR
TCACCTAAACACCATCCACC+AGG 0.596045 1:+29510661 None:intergenic
TCTCGACAATGTATATAGGA+AGG 0.601551 1:-29510523 MsG0180001930.01.T01:exon
AAATACATCAGTAGAATCCG+AGG 0.616512 1:+29510946 None:intergenic
GAGAGTTGCAGAGAACTGTA+GGG 0.628955 1:+29510890 None:intergenic
GAACAGCACATGCTTAACAT+GGG 0.638793 1:-29510632 MsG0180001930.01.T01:CDS
TTGTTACATTATGTGACATG+AGG 0.642877 1:+29510488 None:intergenic
ATACCATCTTGAGTAACAAG+AGG 0.652464 1:+29515055 None:intergenic
TACCATCTTGAGTAACAAGA+GGG 0.659131 1:+29515056 None:intergenic
GATGCCAGTATCTTGAGACC+CGG 0.661948 1:-29510607 MsG0180001930.01.T01:CDS
CCTGGATCAATTGTTCCTGG+TGG 0.664798 1:-29510676 MsG0180001930.01.T01:CDS
TGTAGGGAAATAATTGGACA+GGG 0.678502 1:+29510906 None:intergenic
AACAGCACATGCTTAACATG+GGG 0.679953 1:-29510631 MsG0180001930.01.T01:CDS
AATACATCAGTAGAATCCGA+GGG 0.684730 1:+29510947 None:intergenic
ACATCAGTAGAATCCGAGGG+AGG 0.714847 1:+29510950 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATGAATTAAAAATCTTA+AGG - Chr1:29511201-29511220 MsG0180001930.01.T01:intron 10.0%
!! ATATGAATTAAAAATCTTAA+GGG - Chr1:29511202-29511221 MsG0180001930.01.T01:intron 10.0%
!!! AGAATTACAAAATTTTAATT+AGG + Chr1:29517898-29517917 None:intergenic 10.0%
!!! ATCAATTAATTCTTTTTTTA+GGG + Chr1:29510569-29510588 None:intergenic 10.0%
!!! TTGTTTTTAATAGAATATTA+TGG - Chr1:29513587-29513606 MsG0180001930.01.T01:intron 10.0%
!!! TTTTATTTTAGAATTTAATG+TGG - Chr1:29517923-29517942 MsG0180001930.01.T01:intron 10.0%
!! AAATTATCCTTATTAACTAT+TGG - Chr1:29512245-29512264 MsG0180001930.01.T01:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG + Chr1:29512246-29512265 None:intergenic 15.0%
!! ATTAATTCACACTAAATAAA+AGG + Chr1:29514504-29514523 None:intergenic 15.0%
!! ATTATAAGTTAATTACTTAG+GGG - Chr1:29511709-29511728 MsG0180001930.01.T01:intron 15.0%
!! GATTATAAGTTAATTACTTA+GGG - Chr1:29511708-29511727 MsG0180001930.01.T01:intron 15.0%
!! TATATTATGCTTATAAGATA+AGG + Chr1:29510321-29510340 None:intergenic 15.0%
!! TGATTATAAGTTAATTACTT+AGG - Chr1:29511707-29511726 MsG0180001930.01.T01:intron 15.0%
!! TTATGCATAATTAAAAAATG+CGG - Chr1:29514314-29514333 MsG0180001930.01.T01:intron 15.0%
!!! ATGATTTTATGATAATAGTT+TGG - Chr1:29515995-29516014 MsG0180001930.01.T01:intron 15.0%
!!! ATTTTATTTTATTCTTTTGG+AGG - Chr1:29515372-29515391 MsG0180001930.01.T01:intron 15.0%
!!! ATTTTTCTTAATTTTTCATG+TGG - Chr1:29513417-29513436 MsG0180001930.01.T01:intron 15.0%
!!! CATCAATTAATTCTTTTTTT+AGG + Chr1:29510570-29510589 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - Chr1:29512269-29512288 MsG0180001930.01.T01:intron 15.0%
!!! TATTTTAAGTCGTAATTTTA+TGG - Chr1:29517249-29517268 MsG0180001930.01.T01:intron 15.0%
!!! TCAATTAATTCTTTTTTTAG+GGG + Chr1:29510568-29510587 None:intergenic 15.0%
!!! TTTTATTTTATTCTTTTGGA+GGG - Chr1:29515373-29515392 MsG0180001930.01.T01:intron 15.0%
!! AAACTAACCAATAGTTAATA+AGG + Chr1:29512255-29512274 None:intergenic 20.0%
!! AAATATTTATCATGCATCTT+AGG - Chr1:29516494-29516513 MsG0180001930.01.T01:intron 20.0%
!! AAATTATAAGAGAAACTATC+AGG - Chr1:29513530-29513549 MsG0180001930.01.T01:intron 20.0%
!! AATATTTATCATGCATCTTA+GGG - Chr1:29516495-29516514 MsG0180001930.01.T01:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - Chr1:29512212-29512231 MsG0180001930.01.T01:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - Chr1:29512332-29512351 MsG0180001930.01.T01:intron 20.0%
!! AGACTATTAATAAGAGTTAA+AGG + Chr1:29516206-29516225 None:intergenic 20.0%
!! ATAAGTTCAAAATCTACTAA+TGG - Chr1:29514656-29514675 MsG0180001930.01.T01:intron 20.0%
!! ATAATCAATCATTGTATAAC+TGG - Chr1:29513884-29513903 MsG0180001930.01.T01:intron 20.0%
!! ATATGGTATAATCAATACAA+TGG + Chr1:29516158-29516177 None:intergenic 20.0%
!! ATTAGACAAAAACAAGATAA+AGG + Chr1:29516624-29516643 None:intergenic 20.0%
!! ATTTACAAAGTCATATCTTT+AGG + Chr1:29513336-29513355 None:intergenic 20.0%
!! CTAATATAGAAATAAACCAA+AGG + Chr1:29514738-29514757 None:intergenic 20.0%
!! GAAAAAATTTATAGTCTGTT+AGG - Chr1:29516861-29516880 MsG0180001930.01.T01:intron 20.0%
!! GACAAAATAGAAAATAGAAA+AGG - Chr1:29511274-29511293 MsG0180001930.01.T01:intron 20.0%
!! TAAATCATTCAAGCTATATT+GGG - Chr1:29513351-29513370 MsG0180001930.01.T01:intron 20.0%
!! TAATTAATCCATGAAATACT+GGG + Chr1:29515020-29515039 None:intergenic 20.0%
!! TCAATTACTGAAAAACTATA+GGG + Chr1:29511043-29511062 None:intergenic 20.0%
!! TCTTATAAGCATAATATACA+TGG - Chr1:29510323-29510342 MsG0180001930.01.T01:three_prime_UTR 20.0%
!! TTATAAGTTAATTACTTAGG+GGG - Chr1:29511710-29511729 MsG0180001930.01.T01:intron 20.0%
!! TTGTTAAAAAGTTCACAAAA+TGG + Chr1:29510387-29510406 None:intergenic 20.0%
!! TTTCACTTTAAATAACAAAC+AGG + Chr1:29515293-29515312 None:intergenic 20.0%
!!! AAATTGTACTCAATACTTTT+AGG - Chr1:29515164-29515183 MsG0180001930.01.T01:intron 20.0%
!!! ATTTAAGTGTTTATTGACTA+TGG - Chr1:29514035-29514054 MsG0180001930.01.T01:intron 20.0%
!!! CAATTAATTCTTTTTTTAGG+GGG + Chr1:29510567-29510586 None:intergenic 20.0%
!!! CAGAATCTAATTTTAACTTA+CGG - Chr1:29516824-29516843 MsG0180001930.01.T01:intron 20.0%
!!! GTATTTATATTGACTTTTAC+AGG - Chr1:29515757-29515776 MsG0180001930.01.T01:intron 20.0%
!!! TAATTGACTAGATTTTGAAT+TGG - Chr1:29515691-29515710 MsG0180001930.01.T01:intron 20.0%
!!! TGCATGATAAATATTTTATG+TGG + Chr1:29516490-29516509 None:intergenic 20.0%
!!! TTTATCATCTTTTTCATTGA+TGG + Chr1:29510240-29510259 None:intergenic 20.0%
!!! TTTGATAACATGATTAATAG+TGG - Chr1:29517472-29517491 MsG0180001930.01.T01:intron 20.0%
! AAAACAATGGAAAGAGAAAA+AGG + Chr1:29510452-29510471 None:intergenic 25.0%
! AAATCTACTAATGGTTTGAT+TGG - Chr1:29514665-29514684 MsG0180001930.01.T01:intron 25.0%
! AACAAAACAAAAAAACAAGG+TGG - Chr1:29511139-29511158 MsG0180001930.01.T01:intron 25.0%
! AACAAACATATCATGCTATA+TGG + Chr1:29517961-29517980 None:intergenic 25.0%
! AAGATTACATAAGATGGTTT+GGG + Chr1:29516329-29516348 None:intergenic 25.0%
! AAGTTAAATATTCCAATGCA+CGG + Chr1:29511096-29511115 None:intergenic 25.0%
! AATAGAAAAAGAAACCCAAA+AGG - Chr1:29517782-29517801 MsG0180001930.01.T01:intron 25.0%
! AATCAAAAAGAAATCTCAAG+AGG + Chr1:29515851-29515870 None:intergenic 25.0%
! AATCTTTCAATGACTATGAT+TGG + Chr1:29517166-29517185 None:intergenic 25.0%
! AATTACTGAAAAACTATAGG+GGG + Chr1:29511041-29511060 None:intergenic 25.0%
! ACAATGGCAAACTAAAATTA+AGG + Chr1:29516142-29516161 None:intergenic 25.0%
! ACCATTATTGATAAACTACA+GGG + Chr1:29511012-29511031 None:intergenic 25.0%
! AGGAACAAAACAAAAAAACA+AGG - Chr1:29511136-29511155 MsG0180001930.01.T01:intron 25.0%
! ATGGTGTAAATTCTTAAGTT+TGG - Chr1:29516043-29516062 MsG0180001930.01.T01:intron 25.0%
! ATTATTCACCCATCAATAAA+AGG + Chr1:29510620-29510639 None:intergenic 25.0%
! ATTTATAGTCTGTTAGGTAT+CGG - Chr1:29516867-29516886 MsG0180001930.01.T01:intron 25.0%
! CAATTACTGAAAAACTATAG+GGG + Chr1:29511042-29511061 None:intergenic 25.0%
! CATAAATAGCAACTACTTTA+CGG + Chr1:29516574-29516593 None:intergenic 25.0%
! CCTTTAACATAAACAAAATC+AGG + Chr1:29513075-29513094 None:intergenic 25.0%
! CGCAAATTTATAGTATGATT+TGG - Chr1:29514575-29514594 MsG0180001930.01.T01:intron 25.0%
! CTAATTAATCCATGAAATAC+TGG + Chr1:29515021-29515040 None:intergenic 25.0%
! GAAAATGACTCTTACAAATA+TGG - Chr1:29512109-29512128 MsG0180001930.01.T01:intron 25.0%
! GATTGGATAAAAATGAACTT+AGG - Chr1:29514682-29514701 MsG0180001930.01.T01:intron 25.0%
! GTAAATCATTCAAGCTATAT+TGG - Chr1:29513350-29513369 MsG0180001930.01.T01:intron 25.0%
! GTAACAGGATATATAAGTTT+AGG + Chr1:29516405-29516424 None:intergenic 25.0%
! GTCAATTACTGAAAAACTAT+AGG + Chr1:29511044-29511063 None:intergenic 25.0%
! GTCATGATAGTTATCAAAAA+TGG - Chr1:29510502-29510521 MsG0180001930.01.T01:three_prime_UTR 25.0%
! GTCTTTCTTCATAAGAAAAT+TGG + Chr1:29514907-29514926 None:intergenic 25.0%
! GTTGAAAATACTAAAGAACA+GGG + Chr1:29515792-29515811 None:intergenic 25.0%
! TAAATAAATCACTCTAGACA+TGG + Chr1:29515460-29515479 None:intergenic 25.0%
! TAAATTTCCATATGCTTTGA+TGG - Chr1:29514067-29514086 MsG0180001930.01.T01:intron 25.0%
! TACTATAACGACAAAACAAA+GGG - Chr1:29516090-29516109 MsG0180001930.01.T01:intron 25.0%
! TAGAATTTAATGTGGCTATA+TGG - Chr1:29517931-29517950 MsG0180001930.01.T01:CDS 25.0%
! TATAAGTTAATTACTTAGGG+GGG - Chr1:29511711-29511730 MsG0180001930.01.T01:intron 25.0%
! TATGATTGAGAACAAGAATT+AGG - Chr1:29511116-29511135 MsG0180001930.01.T01:intron 25.0%
! TATTCAGTATCTATTCTGTT+AGG - Chr1:29517008-29517027 MsG0180001930.01.T01:intron 25.0%
! TGACAAAAGTTACAATTTCA+GGG - Chr1:29512063-29512082 MsG0180001930.01.T01:intron 25.0%
! TGTATATTCATATCTCAATC+AGG - Chr1:29516281-29516300 MsG0180001930.01.T01:intron 25.0%
! TGTTGAAAATACTAAAGAAC+AGG + Chr1:29515793-29515812 None:intergenic 25.0%
! TTGAAAATACTAAAGAACAG+GGG + Chr1:29515791-29515810 None:intergenic 25.0%
! TTGACAAAAGTTACAATTTC+AGG - Chr1:29512062-29512081 MsG0180001930.01.T01:intron 25.0%
! TTTCTATTGGTCAAAAACAA+TGG + Chr1:29510465-29510484 None:intergenic 25.0%
!! AACCTCTAATACTTCTAAAA+GGG + Chr1:29515249-29515268 None:intergenic 25.0%
!! ACCATTATTGATAACTACAA+GGG - Chr1:29511741-29511760 MsG0180001930.01.T01:intron 25.0%
!! ATTTTCTTATGAAGAAAGAC+TGG - Chr1:29514907-29514926 MsG0180001930.01.T01:intron 25.0%
!! GTTATTGATGGTTTGTAAAT+CGG - Chr1:29511453-29511472 MsG0180001930.01.T01:intron 25.0%
!! TAAGACTCCAAAAAATTTTC+AGG + Chr1:29514972-29514991 None:intergenic 25.0%
!! TCACTGCATTAGAATATTTT+AGG + Chr1:29511668-29511687 None:intergenic 25.0%
!! TCTTAATTTTTCATGTGGTT+TGG - Chr1:29513422-29513441 MsG0180001930.01.T01:intron 25.0%
!! TTAGTATTTTCAACAGTACT+TGG - Chr1:29515798-29515817 MsG0180001930.01.T01:intron 25.0%
!! TTATGACTGTCTTGTTAAAT+TGG + Chr1:29517384-29517403 None:intergenic 25.0%
!! TTCCAATTTCATTTTGAACA+GGG + Chr1:29511342-29511361 None:intergenic 25.0%
!! TTGTCTAATTTTCATAACCA+CGG + Chr1:29515083-29515102 None:intergenic 25.0%
!! TTTAAAATTGTGATGTCTGT+CGG - Chr1:29515510-29515529 MsG0180001930.01.T01:intron 25.0%
!! TTTAAAGTGAAATCTATGCT+AGG - Chr1:29515301-29515320 MsG0180001930.01.T01:intron 25.0%
!! TTTATCCACCTTTTATTGAT+GGG - Chr1:29510609-29510628 MsG0180001930.01.T01:CDS 25.0%
!! TTTATGGAGTTTTGCATTTT+AGG - Chr1:29517265-29517284 MsG0180001930.01.T01:intron 25.0%
!! TTTTATCCACCTTTTATTGA+TGG - Chr1:29510608-29510627 MsG0180001930.01.T01:CDS 25.0%
!!! AGTTTGTTAGATACATTACA+AGG + Chr1:29514227-29514246 None:intergenic 25.0%
!!! CCTGATTTTGTTTATGTTAA+AGG - Chr1:29513072-29513091 MsG0180001930.01.T01:intron 25.0%
!!! CTGATGTTGAAATCTTTTTT+GGG - Chr1:29513276-29513295 MsG0180001930.01.T01:intron 25.0%
!!! GACAAATGAATGATTTTGAT+TGG + Chr1:29510284-29510303 None:intergenic 25.0%
!!! TCTGATGTTGAAATCTTTTT+TGG - Chr1:29513275-29513294 MsG0180001930.01.T01:intron 25.0%
!!! TGGAATGATTTTTTAACACA+TGG - Chr1:29516015-29516034 MsG0180001930.01.T01:intron 25.0%
!!! TGTTATTTTCGTAGAGTTTT+AGG - Chr1:29511313-29511332 MsG0180001930.01.T01:intron 25.0%
AAAAGTCATGTCATGTCATA+GGG - Chr1:29510856-29510875 MsG0180001930.01.T01:CDS 30.0%
AAACCAGGATCAACAATAAT+GGG + Chr1:29514114-29514133 None:intergenic 30.0%
AAACTATTGTCAACCAAAAG+AGG + Chr1:29514942-29514961 None:intergenic 30.0%
AACATTCTTTGTCTAGTTGT+TGG - Chr1:29515120-29515139 MsG0180001930.01.T01:CDS 30.0%
AACCCTGTTCAAAATGAAAT+TGG - Chr1:29511337-29511356 MsG0180001930.01.T01:intron 30.0%
AACTCAGCATATCCTATATA+GGG + Chr1:29514811-29514830 None:intergenic 30.0%
ACCTTACAAATGTGTTGAAT+AGG - Chr1:29516902-29516921 MsG0180001930.01.T01:intron 30.0%
ACTAAGTATGTGTTTGAAAG+CGG - Chr1:29515205-29515224 MsG0180001930.01.T01:intron 30.0%
ACTATCAGTAAACAAGAAAG+TGG - Chr1:29515969-29515988 MsG0180001930.01.T01:intron 30.0%
ACTTTAAGTAGTCAATCACA+AGG - Chr1:29513991-29514010 MsG0180001930.01.T01:intron 30.0%
AGAGATGAAACTGTTATTGA+TGG - Chr1:29511441-29511460 MsG0180001930.01.T01:intron 30.0%
AGGAAATGACAGAGAAATTA+TGG - Chr1:29511577-29511596 MsG0180001930.01.T01:intron 30.0%
AGTTAAATATTCCAATGCAC+GGG + Chr1:29511095-29511114 None:intergenic 30.0%
ATAAGAAAATTGGAAAGCTC+AGG + Chr1:29514897-29514916 None:intergenic 30.0%
ATCATCTTCTGTAATAGTTC+TGG - Chr1:29517097-29517116 MsG0180001930.01.T01:intron 30.0%
ATCGTTAATGATAACTACAG+GGG - Chr1:29511772-29511791 MsG0180001930.01.T01:intron 30.0%
ATCGTTACTGATAAACTACA+GGG + Chr1:29510980-29510999 None:intergenic 30.0%
ATGTACAAAAATGATATCCG+TGG - Chr1:29515063-29515082 MsG0180001930.01.T01:CDS 30.0%
ATTATTGATAAACTACAGGG+GGG + Chr1:29511009-29511028 None:intergenic 30.0%
ATTGTTGAATTGCTGTCAAA+TGG - Chr1:29517691-29517710 MsG0180001930.01.T01:intron 30.0%
CAACACATTTGTAAGGTTTA+GGG + Chr1:29516899-29516918 None:intergenic 30.0%
CAATGGAAGATTACATAAGA+TGG + Chr1:29516335-29516354 None:intergenic 30.0%
CAGTAATTGAAAGATGGTAA+GGG - Chr1:29511247-29511266 MsG0180001930.01.T01:intron 30.0%
CATTATTGATAAACTACAGG+GGG + Chr1:29511010-29511029 None:intergenic 30.0%
CCATTATTGATAAACTACAG+GGG + Chr1:29511011-29511030 None:intergenic 30.0%
CTACTATAACGACAAAACAA+AGG - Chr1:29516089-29516108 MsG0180001930.01.T01:intron 30.0%
CTGTTCAAAATGAAATTGGA+AGG - Chr1:29511341-29511360 MsG0180001930.01.T01:intron 30.0%
CTTTATGAAGAAGGTTAGAA+TGG + Chr1:29516374-29516393 None:intergenic 30.0%
GAACCTCTAATACTTCTAAA+AGG + Chr1:29515250-29515269 None:intergenic 30.0%
GAAGATTACATAAGATGGTT+TGG + Chr1:29516330-29516349 None:intergenic 30.0%
GAATAGGAAACACAGATATA+AGG - Chr1:29516962-29516981 MsG0180001930.01.T01:intron 30.0%
GACAAAAGTTACAATTTCAG+GGG - Chr1:29512064-29512083 MsG0180001930.01.T01:intron 30.0%
GACCATTATTGATAAACTAC+AGG + Chr1:29511013-29511032 None:intergenic 30.0%
GATCGTTAATGATAACTACA+GGG - Chr1:29511771-29511790 MsG0180001930.01.T01:intron 30.0%
GCTAAGAATGTTCATGTTAT+GGG - Chr1:29513046-29513065 MsG0180001930.01.T01:intron 30.0%
GTTCTTATAGAGTGAAACAA+TGG + Chr1:29516352-29516371 None:intergenic 30.0%
TAACAAGACAGTCATAAATC+AGG - Chr1:29517387-29517406 MsG0180001930.01.T01:intron 30.0%
TATAAGAGAAACTATCAGGA+AGG - Chr1:29513534-29513553 MsG0180001930.01.T01:intron 30.0%
TATACCATATCGTAGATTCA+AGG - Chr1:29516168-29516187 MsG0180001930.01.T01:intron 30.0%
TCAAAATCTGTTGAATTGAG+TGG + Chr1:29517457-29517476 None:intergenic 30.0%
TCAACACATTTGTAAGGTTT+AGG + Chr1:29516900-29516919 None:intergenic 30.0%
TCATAGAATACCTACAAAAC+TGG + Chr1:29516467-29516486 None:intergenic 30.0%
TCCTATTCAACACATTTGTA+AGG + Chr1:29516906-29516925 None:intergenic 30.0%
TGACGAAAGTTACAATTTCA+GGG + Chr1:29510698-29510717 None:intergenic 30.0%
TGATCGTTAATGATAACTAC+AGG - Chr1:29511770-29511789 MsG0180001930.01.T01:intron 30.0%
TGCTAAGAATGTTCATGTTA+TGG - Chr1:29513045-29513064 MsG0180001930.01.T01:intron 30.0%
TGTACATGCTTAACTATTTC+TGG - Chr1:29513918-29513937 MsG0180001930.01.T01:intron 30.0%
TTATGTGTTAGTGTTGTATC+CGG - Chr1:29513818-29513837 MsG0180001930.01.T01:intron 30.0%
TTCCACACTTAAAACAAGAA+AGG - Chr1:29511557-29511576 MsG0180001930.01.T01:intron 30.0%
TTGACGAAAGTTACAATTTC+AGG + Chr1:29510699-29510718 None:intergenic 30.0%
TTGTTACATTATGTGACATG+AGG + Chr1:29517762-29517781 None:intergenic 30.0%
TTTATAGTCTGTTAGGTATC+GGG - Chr1:29516868-29516887 MsG0180001930.01.T01:intron 30.0%
! AAGATCTGCTTAACGTTTTT+AGG + Chr1:29516725-29516744 None:intergenic 30.0%
! ATCAGATGCAGAACAATTTT+GGG - Chr1:29514378-29514397 MsG0180001930.01.T01:intron 30.0%
! ATTATTGATAACTACAAGGG+GGG - Chr1:29511744-29511763 MsG0180001930.01.T01:intron 30.0%
! CATTATTGATAACTACAAGG+GGG - Chr1:29511743-29511762 MsG0180001930.01.T01:intron 30.0%
! CCATTATTGATAACTACAAG+GGG - Chr1:29511742-29511761 MsG0180001930.01.T01:intron 30.0%
! CCATTTTCTCAAATTACTAC+CGG - Chr1:29513792-29513811 MsG0180001930.01.T01:intron 30.0%
! CTTCCAATTTCATTTTGAAC+AGG + Chr1:29511343-29511362 None:intergenic 30.0%
! GACCATTATTGATAACTACA+AGG - Chr1:29511740-29511759 MsG0180001930.01.T01:intron 30.0%
! GACTAGATTTTGAATTGGAA+GGG - Chr1:29515696-29515715 MsG0180001930.01.T01:intron 30.0%
! GTACATGCTTAACTATTTCT+GGG - Chr1:29513919-29513938 MsG0180001930.01.T01:intron 30.0%
! GTAGTGTTCAGAGTATTAAT+TGG - Chr1:29512294-29512313 MsG0180001930.01.T01:intron 30.0%
! TACTTCTAAAAGGGAAAATC+AGG + Chr1:29515240-29515259 None:intergenic 30.0%
! TATCAGATGCAGAACAATTT+TGG - Chr1:29514377-29514396 MsG0180001930.01.T01:intron 30.0%
! TGACTAGATTTTGAATTGGA+AGG - Chr1:29515695-29515714 MsG0180001930.01.T01:intron 30.0%
! TGTTCAGAGTATTAATTGGA+GGG - Chr1:29512298-29512317 MsG0180001930.01.T01:intron 30.0%
! TTCTAGTAGTCATAAGCTTT+TGG - Chr1:29513674-29513693 MsG0180001930.01.T01:intron 30.0%
! TTGACGTTTTGCAAAATTCA+GGG + Chr1:29510727-29510746 None:intergenic 30.0%
! TTGCTCAACTCAGAAAATTT+TGG - Chr1:29515869-29515888 MsG0180001930.01.T01:intron 30.0%
! TTTGACGTTTTGCAAAATTC+AGG + Chr1:29510728-29510747 None:intergenic 30.0%
! TTTTTAACACATGGCACAAA+TGG - Chr1:29516024-29516043 MsG0180001930.01.T01:intron 30.0%
! TTTTTGACCAATAGAAAGAG+AGG - Chr1:29510468-29510487 MsG0180001930.01.T01:three_prime_UTR 30.0%
!! AAACGACACTCATTTTGAAA+CGG + Chr1:29512163-29512182 None:intergenic 30.0%
!! AAAGAAAAGCATCATCACAA+TGG - Chr1:29512575-29512594 MsG0180001930.01.T01:intron 30.0%
!! AAGCGACACTCATTTTAAAA+CGG - Chr1:29512397-29512416 MsG0180001930.01.T01:intron 30.0%
!! ACTCAATACTTTTAGGTGAA+TGG - Chr1:29515171-29515190 MsG0180001930.01.T01:intron 30.0%
!! GATTTGTTCTTTTCTTTTGC+AGG - Chr1:29517214-29517233 MsG0180001930.01.T01:intron 30.0%
!! TATTTTGTGTCCAGTTTTGT+AGG - Chr1:29516454-29516473 MsG0180001930.01.T01:intron 30.0%
!!! GACTTCGGTTCAAAATTTTT+TGG + Chr1:29517552-29517571 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - Chr1:29512164-29512183 MsG0180001930.01.T01:intron 30.0%
!!! TTCCCTTTTAGAAGTATTAG+AGG - Chr1:29515244-29515263 MsG0180001930.01.T01:intron 30.0%
!!! TTCCTTTCTTGTTTTAAGTG+TGG + Chr1:29511562-29511581 None:intergenic 30.0%
AAACCCATTATTGTTGATCC+TGG - Chr1:29514108-29514127 MsG0180001930.01.T01:intron 35.0%
AAAGTCATGTCATGTCATAG+GGG - Chr1:29510857-29510876 MsG0180001930.01.T01:CDS 35.0%
AAATAATTGGACAGGGATGA+TGG + Chr1:29517337-29517356 None:intergenic 35.0%
AAATACATCAGTAGAATCCG+AGG + Chr1:29517304-29517323 None:intergenic 35.0%
AAATGATGCAATAGACGAGT+AGG + Chr1:29516433-29516452 None:intergenic 35.0%
AACATGTGGGTTCTATAGTA+AGG - Chr1:29513458-29513477 MsG0180001930.01.T01:intron 35.0%
AACGATATGAATCAACTGCT+TGG - Chr1:29517814-29517833 MsG0180001930.01.T01:intron 35.0%
AATACATCAGTAGAATCCGA+GGG + Chr1:29517303-29517322 None:intergenic 35.0%
AATAGAACTATGACAACGTC+AGG + Chr1:29516674-29516693 None:intergenic 35.0%
AATGAACTTAGGCATGACAA+TGG - Chr1:29514693-29514712 MsG0180001930.01.T01:intron 35.0%
AATGTGTTGAATAGGAGAGT+TGG - Chr1:29516910-29516929 MsG0180001930.01.T01:intron 35.0%
ACAACACAACATGAGATCAA+AGG - Chr1:29512523-29512542 MsG0180001930.01.T01:intron 35.0%
ACATGTAGAGAGAAACATGT+GGG - Chr1:29513445-29513464 MsG0180001930.01.T01:intron 35.0%
ACCAATAGAAAGAGAGGAAA+AGG - Chr1:29510474-29510493 MsG0180001930.01.T01:three_prime_UTR 35.0%
ACGAAAGTTACAATTTCAGG+GGG + Chr1:29510696-29510715 None:intergenic 35.0%
ACTCAGCATATCCTATATAG+GGG + Chr1:29514810-29514829 None:intergenic 35.0%
AGAGAGTTATCTCTTCTTTG+AGG - Chr1:29517050-29517069 MsG0180001930.01.T01:intron 35.0%
AGGTAATTAACTCCACTTGA+TGG + Chr1:29516122-29516141 None:intergenic 35.0%
AGTAAGGAGAGTAGATCATA+TGG - Chr1:29513474-29513493 MsG0180001930.01.T01:intron 35.0%
AGTGTGTTTGGGAAGTAAAT+TGG - Chr1:29515624-29515643 MsG0180001930.01.T01:intron 35.0%
AGTTTGTGTGACAGCATTTA+AGG + Chr1:29517988-29518007 None:intergenic 35.0%
ATACCATCTTGAGTAACAAG+AGG + Chr1:29513195-29513214 None:intergenic 35.0%
ATCATTCAAGCTATATTGGG+TGG - Chr1:29513354-29513373 MsG0180001930.01.T01:intron 35.0%
ATGAAACACAAACACCAACA+CGG + Chr1:29513847-29513866 None:intergenic 35.0%
ATGAAATTGGAAGGTTGAGA+TGG - Chr1:29511350-29511369 MsG0180001930.01.T01:intron 35.0%
ATGAACTTAGGCATGACAAT+GGG - Chr1:29514694-29514713 MsG0180001930.01.T01:intron 35.0%
ATTCACCCATCAATAAAAGG+TGG + Chr1:29510617-29510636 None:intergenic 35.0%
ATTGTTCTGCATCTGATATC+AGG + Chr1:29514375-29514394 None:intergenic 35.0%
CAAACCAGGATCAACAATAA+TGG + Chr1:29514115-29514134 None:intergenic 35.0%
CAAAGGAACAATCATCATAG+AGG - Chr1:29512540-29512559 MsG0180001930.01.T01:intron 35.0%
CAACACTAACACATAAACAC+CGG + Chr1:29513814-29513833 None:intergenic 35.0%
CATCAAGTAATACAGCTTTG+TGG - Chr1:29518031-29518050 MsG0180001930.01.T01:CDS 35.0%
CCAGTAATTGAAAGATGGTA+AGG - Chr1:29511246-29511265 MsG0180001930.01.T01:intron 35.0%
CCATTACATAGTTGACCAAA+TGG - Chr1:29515575-29515594 MsG0180001930.01.T01:intron 35.0%
CCATTTGGTCAACTATGTAA+TGG + Chr1:29515578-29515597 None:intergenic 35.0%
CCCCTGTAGTTTATCAATAA+TGG - Chr1:29511008-29511027 MsG0180001930.01.T01:CDS 35.0%
CCCCTTGTAGTTATCAATAA+TGG + Chr1:29511745-29511764 None:intergenic 35.0%
CCGGTAGTAATTTGAGAAAA+TGG + Chr1:29513795-29513814 None:intergenic 35.0%
CCTATATACATTGTCGAGAT+CGG + Chr1:29517723-29517742 None:intergenic 35.0%
CCTTACCATCTTTCAATTAC+TGG + Chr1:29511249-29511268 None:intergenic 35.0%
GAAAAGTCATGTCATGTCAT+AGG - Chr1:29510855-29510874 MsG0180001930.01.T01:CDS 35.0%
GAAAGTGAAGAAGAACATTG+TGG + Chr1:29512641-29512660 None:intergenic 35.0%
GAACTCAGCATATCCTATAT+AGG + Chr1:29514812-29514831 None:intergenic 35.0%
GAACTCCAGTAATTGAAAGA+TGG - Chr1:29511241-29511260 MsG0180001930.01.T01:intron 35.0%
GACGAAAGTTACAATTTCAG+GGG + Chr1:29510697-29510716 None:intergenic 35.0%
GAGAACTGTAGGGAAATAAT+TGG + Chr1:29517350-29517369 None:intergenic 35.0%
GATCGTTACTGATAAACTAC+AGG + Chr1:29510981-29511000 None:intergenic 35.0%
GGAAAATTTCCTTCCTTCAT+TGG - Chr1:29511496-29511515 MsG0180001930.01.T01:intron 35.0%
GGATAGTGAAAATAGTGTCT+TGG - Chr1:29514399-29514418 MsG0180001930.01.T01:intron 35.0%
GGTAATTAACTCCACTTGAT+GGG + Chr1:29516121-29516140 None:intergenic 35.0%
TAAAAGGGAAAATCAGGAAG+AGG + Chr1:29515234-29515253 None:intergenic 35.0%
TACCATCTTGAGTAACAAGA+GGG + Chr1:29513194-29513213 None:intergenic 35.0%
TATAAGGAGAGAACATGACA+AGG - Chr1:29516978-29516997 MsG0180001930.01.T01:intron 35.0%
TATGTATCTGTGACCAATGA+AGG + Chr1:29511512-29511531 None:intergenic 35.0%
TCAATCAGATCGTGAAAAGT+TGG - Chr1:29512988-29513007 MsG0180001930.01.T01:intron 35.0%
TCGTTAATGATAACTACAGG+GGG - Chr1:29511773-29511792 MsG0180001930.01.T01:intron 35.0%
TCGTTACTGATAAACTACAG+GGG + Chr1:29510979-29510998 None:intergenic 35.0%
TCTCGACAATGTATATAGGA+AGG - Chr1:29517724-29517743 MsG0180001930.01.T01:intron 35.0%
TCTTGTTACTCAAGATGGTA+TGG - Chr1:29513194-29513213 MsG0180001930.01.T01:intron 35.0%
TGAATTGGAAGGGAATTGAT+GGG - Chr1:29515706-29515725 MsG0180001930.01.T01:intron 35.0%
TGGTCCTTAGTTTATCTAGT+GGG - Chr1:29517834-29517853 MsG0180001930.01.T01:intron 35.0%
TGTAGGGAAATAATTGGACA+GGG + Chr1:29517344-29517363 None:intergenic 35.0%
TGTAGTCGACCAAACTTAAT+CGG - Chr1:29513627-29513646 MsG0180001930.01.T01:intron 35.0%
TGTGAAAAGACTGAAAGAAG+TGG - Chr1:29512436-29512455 MsG0180001930.01.T01:intron 35.0%
TGTTGGATGGAGGAAATTAA+CGG - Chr1:29511970-29511989 MsG0180001930.01.T01:intron 35.0%
TGTTGGATGGAGGAAATTAA+CGG + Chr1:29511989-29511970 None:intergenic 35.0%
TTACTCAAGATGGTATGGTA+TGG - Chr1:29513199-29513218 MsG0180001930.01.T01:intron 35.0%
TTGAATTGGAAGGGAATTGA+TGG - Chr1:29515705-29515724 MsG0180001930.01.T01:intron 35.0%
TTGGTCCTTAGTTTATCTAG+TGG - Chr1:29517833-29517852 MsG0180001930.01.T01:intron 35.0%
! AAAATTTTGAACCGAAGTCC+TGG - Chr1:29517553-29517572 MsG0180001930.01.T01:intron 35.0%
! AACTTTTCACGATCTGATTG+AGG + Chr1:29512989-29513008 None:intergenic 35.0%
! AAGCCTTATCCGATTAAGTT+TGG + Chr1:29513639-29513658 None:intergenic 35.0%
! ACATGACTTTTCTGATCATG+TGG + Chr1:29510847-29510866 None:intergenic 35.0%
! AGGAAATTTTCCGCAATCAA+AGG + Chr1:29511488-29511507 None:intergenic 35.0%
! ATCGTTCTTATCGATCCTTT+TGG + Chr1:29517800-29517819 None:intergenic 35.0%
! ATTGATGGTTTGTAAATCGG+TGG - Chr1:29511456-29511475 MsG0180001930.01.T01:intron 35.0%
! CAATCACAAGGTTTTGCATT+GGG - Chr1:29514003-29514022 MsG0180001930.01.T01:intron 35.0%
! CAGATTCATTAGCTTATTCG+TGG - Chr1:29515549-29515568 MsG0180001930.01.T01:intron 35.0%
! CTGGTTTGTATCTTTCTGAA+GGG - Chr1:29514127-29514146 MsG0180001930.01.T01:intron 35.0%
! GTGTTCAGAGTATTAATTGG+AGG - Chr1:29512297-29512316 MsG0180001930.01.T01:intron 35.0%
! GTTTTGCTCATCATGATTGA+TGG - Chr1:29516548-29516567 MsG0180001930.01.T01:intron 35.0%
! TAGTTCTACCATCTTTGAAG+GGG - Chr1:29516247-29516266 MsG0180001930.01.T01:intron 35.0%
! TCAATCACAAGGTTTTGCAT+TGG - Chr1:29514002-29514021 MsG0180001930.01.T01:intron 35.0%
! TCCTTTTCCTCTCTTTCTAT+TGG + Chr1:29510478-29510497 None:intergenic 35.0%
! TCGTTCTTATCGATCCTTTT+GGG + Chr1:29517799-29517818 None:intergenic 35.0%
! TGACGTTTTGCAAAATTCAG+GGG + Chr1:29510726-29510745 None:intergenic 35.0%
! TGATTCGTTTGTCTTTGAGA+TGG - Chr1:29513136-29513155 MsG0180001930.01.T01:intron 35.0%
! TGATTTGGCTATGACTGTTT+AGG - Chr1:29514590-29514609 MsG0180001930.01.T01:intron 35.0%
! TGGTTGACAATAGTTTGCAA+AGG - Chr1:29514946-29514965 MsG0180001930.01.T01:intron 35.0%
! TGGTTTAGGGTCTTTGATTA+AGG + Chr1:29512678-29512697 None:intergenic 35.0%
! TTCTAGCTACCATATCTGAA+GGG - Chr1:29511624-29511643 MsG0180001930.01.T01:intron 35.0%
! TTGACGTTTTGCAAAACTCA+GGG - Chr1:29512034-29512053 MsG0180001930.01.T01:intron 35.0%
! TTTGACGTTTTGCAAAACTC+AGG - Chr1:29512033-29512052 MsG0180001930.01.T01:intron 35.0%
! TTTTTGCCACTAGTGTGTTT+GGG - Chr1:29515613-29515632 MsG0180001930.01.T01:intron 35.0%
!! CTAGTTCTACCATCTTTGAA+GGG - Chr1:29516246-29516265 MsG0180001930.01.T01:intron 35.0%
!! GATTCGTTTGTCTTTGAGAT+GGG - Chr1:29513137-29513156 MsG0180001930.01.T01:intron 35.0%
!! TACTTTTAGGTGAATGGTTG+AGG - Chr1:29515177-29515196 MsG0180001930.01.T01:intron 35.0%
!! TCTAGTTCTACCATCTTTGA+AGG - Chr1:29516245-29516264 MsG0180001930.01.T01:intron 35.0%
!! TGAAGAAGGTATTGGTTAAG+AGG + Chr1:29512950-29512969 None:intergenic 35.0%
!! TGCTTAACTATTTCTGGGTT+TGG - Chr1:29513924-29513943 MsG0180001930.01.T01:intron 35.0%
!! TGTGGTCAGTTTGTTAGAAT+AGG - Chr1:29516946-29516965 MsG0180001930.01.T01:intron 35.0%
!! TGTTAGGAACCTTTCAAGTT+AGG - Chr1:29517024-29517043 MsG0180001930.01.T01:intron 35.0%
!! TTAGGCAGGATTAGTGTTTT+GGG - Chr1:29514608-29514627 MsG0180001930.01.T01:intron 35.0%
!! TTTAGGCAGGATTAGTGTTT+TGG - Chr1:29514607-29514626 MsG0180001930.01.T01:intron 35.0%
!! TTTATTCTTTTGGAGGGTAG+AGG - Chr1:29515379-29515398 MsG0180001930.01.T01:intron 35.0%
!! TTTCTAGCTACCATATCTGA+AGG - Chr1:29511623-29511642 MsG0180001930.01.T01:intron 35.0%
!!! AATGTGTAGAGGATTGGTTT+TGG + Chr1:29512698-29512717 None:intergenic 35.0%
!!! AGAGGATTGGTTTTGGTTTA+GGG + Chr1:29512691-29512710 None:intergenic 35.0%
!!! CATTGTGGTTTTGTTGTTGT+TGG + Chr1:29512626-29512645 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+GGG - Chr1:29512401-29512420 MsG0180001930.01.T01:intron 35.0%
!!! GATTAGTGTTTTGGGTTGTA+TGG - Chr1:29514616-29514635 MsG0180001930.01.T01:intron 35.0%
!!! GCAAAGGCCTGAAAATTTTT+TGG - Chr1:29514962-29514981 MsG0180001930.01.T01:intron 35.0%
!!! TAGAGGATTGGTTTTGGTTT+AGG + Chr1:29512692-29512711 None:intergenic 35.0%
!!! TGCTTAACGTTTTTAGGTGA+CGG + Chr1:29516719-29516738 None:intergenic 35.0%
AAAAGTCATGCCACGTCATA+GGG + Chr1:29511904-29511923 None:intergenic 40.0%
AAAGGGTAATACCCATCAAG+TGG - Chr1:29516107-29516126 MsG0180001930.01.T01:intron 40.0%
AAATGCTGTCACACAAACTC+TGG - Chr1:29517989-29518008 MsG0180001930.01.T01:CDS 40.0%
AACAGCACATGCTTAACATG+GGG - Chr1:29517616-29517635 MsG0180001930.01.T01:intron 40.0%
AAGACTGAAAGAAGTGGAGA+AGG - Chr1:29512442-29512461 MsG0180001930.01.T01:intron 40.0%
AAGGAGAGTAGATCATATGG+AGG - Chr1:29513477-29513496 MsG0180001930.01.T01:intron 40.0%
AAGTCATGTCATGTCATAGG+GGG - Chr1:29510858-29510877 MsG0180001930.01.T01:CDS 40.0%
ACAAAGAGTTCATACAGCCA+AGG + Chr1:29514867-29514886 None:intergenic 40.0%
ACAGACGCTAGACAATTTCA+AGG - Chr1:29512006-29512025 MsG0180001930.01.T01:intron 40.0%
ACAGACGCTAGACAATTTCA+GGG + Chr1:29512025-29512006 None:intergenic 40.0%
ACCTAGACCATCAAAGCATA+TGG + Chr1:29514077-29514096 None:intergenic 40.0%
AGACGCTAGACAATTTCAAG+GGG - Chr1:29512008-29512027 MsG0180001930.01.T01:intron 40.0%
AGGAGAGTAGATCATATGGA+GGG - Chr1:29513478-29513497 MsG0180001930.01.T01:intron 40.0%
CAGACGCTAGACAATTTCAA+GGG - Chr1:29512007-29512026 MsG0180001930.01.T01:intron 40.0%
CAGCAATGCTAACAATCAGA+TGG - Chr1:29515338-29515357 MsG0180001930.01.T01:intron 40.0%
CCGATCTCGACAATGTATAT+AGG - Chr1:29517720-29517739 MsG0180001930.01.T01:intron 40.0%
CCTTCAGAAAGATACAAACC+AGG + Chr1:29514129-29514148 None:intergenic 40.0%
CGAAAGTTACAATTTCAGGG+GGG + Chr1:29510695-29510714 None:intergenic 40.0%
CGACCAAACTTAATCGGATA+AGG - Chr1:29513633-29513652 MsG0180001930.01.T01:intron 40.0%
CGTTACTGATAAACTACAGG+GGG + Chr1:29510978-29510997 None:intergenic 40.0%
CGTTATAGTAGCATATCGCT+TGG + Chr1:29516080-29516099 None:intergenic 40.0%
CTACCCCACTAGATAAACTA+AGG + Chr1:29517841-29517860 None:intergenic 40.0%
CTCATGTTGTGTTGTGTGTT+TGG + Chr1:29512518-29512537 None:intergenic 40.0%
CTGTAGGGAAATAATTGGAC+AGG + Chr1:29517345-29517364 None:intergenic 40.0%
GAAATGAGGTATGCTATGGA+AGG + Chr1:29512872-29512891 None:intergenic 40.0%
GAACAATTGATCCAGGACTT+CGG + Chr1:29517567-29517586 None:intergenic 40.0%
GAACAGCACATGCTTAACAT+GGG - Chr1:29517615-29517634 MsG0180001930.01.T01:intron 40.0%
GACATGTAGAGAGAAACATG+TGG - Chr1:29513444-29513463 MsG0180001930.01.T01:intron 40.0%
GCATGAAGAGTAAACGAAAC+AGG + Chr1:29513105-29513124 None:intergenic 40.0%
GGATCTAGAGACTAATGAGT+TGG - Chr1:29513555-29513574 MsG0180001930.01.T01:intron 40.0%
GGATTCTTAGACCCCTATAT+AGG - Chr1:29514796-29514815 MsG0180001930.01.T01:intron 40.0%
GGTCCTTAGTTTATCTAGTG+GGG - Chr1:29517835-29517854 MsG0180001930.01.T01:intron 40.0%
GGTCGACTACATGAATCAAA+TGG + Chr1:29513618-29513637 None:intergenic 40.0%
GTTGGTTACAATTGCAGATG+TGG - Chr1:29516928-29516947 MsG0180001930.01.T01:intron 40.0%
TAAACATGCGGTAAGCACTA+GGG + Chr1:29514187-29514206 None:intergenic 40.0%
TACATTATGTGACATGAGGC+TGG + Chr1:29517758-29517777 None:intergenic 40.0%
TACCCTCTTGTTACTCAAGA+TGG - Chr1:29513189-29513208 MsG0180001930.01.T01:intron 40.0%
TATCTGTGACCAATGAAGGA+AGG + Chr1:29511508-29511527 None:intergenic 40.0%
TCCATAGCATACCTCATTTC+CGG - Chr1:29512872-29512891 MsG0180001930.01.T01:intron 40.0%
TCTTGAAGCGATCATACCTT+TGG - Chr1:29514719-29514738 MsG0180001930.01.T01:intron 40.0%
TGAACTTAGGCATGACAATG+GGG - Chr1:29514695-29514714 MsG0180001930.01.T01:intron 40.0%
TGACGTACTCTTGACTAAGA+TGG + Chr1:29514287-29514306 None:intergenic 40.0%
TGAGCAAAACACGTAAGAGA+AGG + Chr1:29516538-29516557 None:intergenic 40.0%
TGCTAACAATCAGATGGTTC+TGG - Chr1:29515344-29515363 MsG0180001930.01.T01:intron 40.0%
TTACTTCCCAAACACACTAG+TGG + Chr1:29515622-29515641 None:intergenic 40.0%
! AAGTCGTTTAGAGCCTTTAC+CGG + Chr1:29517662-29517681 None:intergenic 40.0%
! AGATTCCTGTTTCTCAGACA+GGG + Chr1:29515668-29515687 None:intergenic 40.0%
! CCTGGTTTGTATCTTTCTGA+AGG - Chr1:29514126-29514145 MsG0180001930.01.T01:intron 40.0%
! CTTTTTGCCACTAGTGTGTT+TGG - Chr1:29515612-29515631 MsG0180001930.01.T01:intron 40.0%
! GACGTTTTGCAAAATTCAGG+GGG + Chr1:29510725-29510744 None:intergenic 40.0%
! GACTGAGAGCTTTATGAAGA+AGG + Chr1:29516383-29516402 None:intergenic 40.0%
! GAGTTATCTCTTCTTTGAGG+TGG - Chr1:29517053-29517072 MsG0180001930.01.T01:intron 40.0%
! GGTCAAGATGAAGAAGGTAT+TGG + Chr1:29512958-29512977 None:intergenic 40.0%
! GTAGAAGCACAAGTGTGATT+TGG - Chr1:29515419-29515438 MsG0180001930.01.T01:intron 40.0%
! TAAGAGTTAAAGGCATGCCT+CGG + Chr1:29516196-29516215 None:intergenic 40.0%
! TCCATATGCTTTGATGGTCT+AGG - Chr1:29514073-29514092 MsG0180001930.01.T01:intron 40.0%
! TGACGTTTTGCAAAACTCAG+GGG - Chr1:29512035-29512054 MsG0180001930.01.T01:intron 40.0%
! TGGTGATGTTGTTGTTGTTC+TGG + Chr1:29512606-29512625 None:intergenic 40.0%
!! CTGGGTTTGGTGAAATATCA+AGG - Chr1:29513937-29513956 MsG0180001930.01.T01:intron 40.0%
!! CTGGTTTGTAGTACCTCTTT+TGG - Chr1:29514926-29514945 MsG0180001930.01.T01:intron 40.0%
!! CTTTGTCTAGTTGTTGGCTT+AGG - Chr1:29515126-29515145 MsG0180001930.01.T01:CDS 40.0%
!! GTGGTCGAAGATTGTTTCTA+TGG + Chr1:29517438-29517457 None:intergenic 40.0%
!! GTTTGTCTTTGAGATGGGAT+TGG - Chr1:29513142-29513161 MsG0180001930.01.T01:intron 40.0%
!!! CGACACTCATTTTAAAACGG+AGG - Chr1:29512400-29512419 MsG0180001930.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr1:29512159-29512178 None:intergenic 40.0%
AAAGTCATGCCACGTCATAG+GGG + Chr1:29511903-29511922 None:intergenic 45.0%
AAGGTGAGAGAGGGAATCAA+AGG - Chr1:29512461-29512480 MsG0180001930.01.T01:intron 45.0%
AGACGCTAGACAATTTCAGG+GGG + Chr1:29510753-29510772 None:intergenic 45.0%
AGATCGAGAACAGGATCATC+TGG + Chr1:29517523-29517542 None:intergenic 45.0%
AGCAGATCTTGTGTCCTGTT+TGG - Chr1:29516735-29516754 MsG0180001930.01.T01:intron 45.0%
AGCTACCATATCTGAAGGGA+GGG - Chr1:29511628-29511647 MsG0180001930.01.T01:intron 45.0%
AGGAGAGAACATGACAAGGT+AGG - Chr1:29516982-29517001 MsG0180001930.01.T01:intron 45.0%
AGTATCTTGAGACCCGGTAA+AGG - Chr1:29517646-29517665 MsG0180001930.01.T01:intron 45.0%
AGTCCTGGATCAATTGTTCC+TGG - Chr1:29517568-29517587 MsG0180001930.01.T01:intron 45.0%
AGTGCTTACCGCATGTTTAC+AGG - Chr1:29514188-29514207 MsG0180001930.01.T01:intron 45.0%
ATACCTCATTTCCGGGTCAA+AGG - Chr1:29512880-29512899 MsG0180001930.01.T01:intron 45.0%
ATGAGGTATGCTATGGAAGG+TGG + Chr1:29512869-29512888 None:intergenic 45.0%
ATGGAGGAAATTAACGGAGG+GGG - Chr1:29511976-29511995 MsG0180001930.01.T01:intron 45.0%
ATGGAGGAAATTAACGGAGG+GGG + Chr1:29511995-29511976 None:intergenic 45.0%
CAACAATGCCCCTTCAAAGA+TGG + Chr1:29516258-29516277 None:intergenic 45.0%
CAGAAGGGTCAAGATGAAGA+AGG + Chr1:29512964-29512983 None:intergenic 45.0%
CAGACGCTAGACAATTTCAG+GGG + Chr1:29510754-29510773 None:intergenic 45.0%
CAGGGTCAAATACGTCAAGT+AGG + Chr1:29515650-29515669 None:intergenic 45.0%
CATGAAGTTTACCCGTGCAT+TGG - Chr1:29511081-29511100 MsG0180001930.01.T01:intron 45.0%
CCATAGCATACCTCATTTCC+GGG - Chr1:29512873-29512892 MsG0180001930.01.T01:intron 45.0%
CCATGAAATACTGGGCACTA+AGG + Chr1:29515012-29515031 None:intergenic 45.0%
CCTTAGTGCCCAGTATTTCA+TGG - Chr1:29515009-29515028 MsG0180001930.01.T01:intron 45.0%
CGCTAGAAGCTAATCCAAAC+AGG + Chr1:29516752-29516771 None:intergenic 45.0%
CTCTCTCTGCCTAACTTGAA+AGG + Chr1:29517036-29517055 None:intergenic 45.0%
GAAAAGTCATGCCACGTCAT+AGG + Chr1:29511905-29511924 None:intergenic 45.0%
GAACTTAGGCATGACAATGG+GGG - Chr1:29514696-29514715 MsG0180001930.01.T01:intron 45.0%
GACAGACGCTAGACAATTTC+AGG + Chr1:29512024-29512005 None:intergenic 45.0%
GACGAGTAGGCATAAGTAAC+AGG + Chr1:29516420-29516439 None:intergenic 45.0%
GAGAGTTGCAGAGAACTGTA+GGG + Chr1:29517360-29517379 None:intergenic 45.0%
GATCAATTGTTCCTGGTGGA+TGG - Chr1:29517575-29517594 MsG0180001930.01.T01:intron 45.0%
GATCTGATTGAGGAGCAGAA+GGG + Chr1:29512979-29512998 None:intergenic 45.0%
GATGGAGGAAATTAACGGAG+GGG - Chr1:29511975-29511994 MsG0180001930.01.T01:intron 45.0%
GATGGAGGAAATTAACGGAG+GGG + Chr1:29511994-29511975 None:intergenic 45.0%
GCATTGCTGTCAACACTTCA+AGG + Chr1:29515327-29515346 None:intergenic 45.0%
GCTAGGAATGTGTAGAGGAT+TGG + Chr1:29512704-29512723 None:intergenic 45.0%
GGAACAGCACATGCTTAACA+TGG - Chr1:29517614-29517633 MsG0180001930.01.T01:intron 45.0%
GGAGAGTAGATCATATGGAG+GGG - Chr1:29513479-29513498 MsG0180001930.01.T01:intron 45.0%
GGATGGAGGAAATTAACGGA+GGG - Chr1:29511974-29511993 MsG0180001930.01.T01:intron 45.0%
GGATGGAGGAAATTAACGGA+GGG + Chr1:29511993-29511974 None:intergenic 45.0%
GGCTCCTTGAATCTACGATA+TGG + Chr1:29516175-29516194 None:intergenic 45.0%
GTAAACATGCGGTAAGCACT+AGG + Chr1:29514188-29514207 None:intergenic 45.0%
GTTCCTTGCTTTGCTGCTAT+CGG - Chr1:29515266-29515285 MsG0180001930.01.T01:intron 45.0%
TAACGACCACATCAGCATGT+TGG + Chr1:29510807-29510826 None:intergenic 45.0%
TACCTCATTTCCGGGTCAAA+GGG - Chr1:29512881-29512900 MsG0180001930.01.T01:intron 45.0%
TAGCTACCATATCTGAAGGG+AGG - Chr1:29511627-29511646 MsG0180001930.01.T01:intron 45.0%
TAGGCAGAAACGACATGATG+TGG + Chr1:29513317-29513336 None:intergenic 45.0%
TGAGAGAGGGAATCAAAGGA+AGG - Chr1:29512465-29512484 MsG0180001930.01.T01:intron 45.0%
TGGATGGAGGAAATTAACGG+AGG - Chr1:29511973-29511992 MsG0180001930.01.T01:intron 45.0%
TGGATGGAGGAAATTAACGG+AGG + Chr1:29511992-29511973 None:intergenic 45.0%
TGTCTTGGTCGTAGATGATG+CGG + Chr1:29512832-29512851 None:intergenic 45.0%
TTGGCTATGACTGTTTAGGC+AGG - Chr1:29514594-29514613 MsG0180001930.01.T01:intron 45.0%
TTTACCGGGTCTCAAGATAC+TGG + Chr1:29517647-29517666 None:intergenic 45.0%
TTTGACCCTGTCTGAGAAAC+AGG - Chr1:29515660-29515679 MsG0180001930.01.T01:intron 45.0%
! AGAGTGCTAGGAATGTGTAG+AGG + Chr1:29512709-29512728 None:intergenic 45.0%
! AGTCGTTTAGAGCCTTTACC+GGG + Chr1:29517661-29517680 None:intergenic 45.0%
! GACGTTTTGCAAAACTCAGG+GGG - Chr1:29512036-29512055 MsG0180001930.01.T01:intron 45.0%
! GAGATTCCTGTTTCTCAGAC+AGG + Chr1:29515669-29515688 None:intergenic 45.0%
! GCATGACTTTTCTGACCATG+TGG - Chr1:29511913-29511932 MsG0180001930.01.T01:intron 45.0%
! TTTTCCGCAATCAAAGGCCA+TGG + Chr1:29511482-29511501 None:intergenic 45.0%
!! TCTTTTGGAGGGTAGAGGAA+AGG - Chr1:29515384-29515403 MsG0180001930.01.T01:intron 45.0%
!! TGGATTAGCTCTGCAGTTAC+AGG - Chr1:29517073-29517092 MsG0180001930.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr1:29512160-29512179 None:intergenic 45.0%
!!! TAAATTTTATTTTATTCTTT+TGG - Chr1:29515369-29515388 MsG0180001930.01.T01:intron 5.0%
AAGAGGTGAGAGAGAGGATG+AGG + Chr1:29512748-29512767 None:intergenic 50.0%
AAGTCATGCCACGTCATAGG+GGG + Chr1:29511902-29511921 None:intergenic 50.0%
ACAAACACCAACACGGTTGC+CGG + Chr1:29513840-29513859 None:intergenic 50.0%
ACATCAGTAGAATCCGAGGG+AGG + Chr1:29517300-29517319 None:intergenic 50.0%
ACGTTGCAGACAGTAGCCTA+AGG + Chr1:29512922-29512941 None:intergenic 50.0%
AGAAGTGGAGAAGGTGAGAG+AGG - Chr1:29512451-29512470 MsG0180001930.01.T01:intron 50.0%
AGGTATGCTATGGAAGGTGG+TGG + Chr1:29512866-29512885 None:intergenic 50.0%
ATCGTAGATTCAAGGAGCCG+AGG - Chr1:29516176-29516195 MsG0180001930.01.T01:intron 50.0%
CACATCAGCATGTTGGATGG+AGG - Chr1:29511960-29511979 MsG0180001930.01.T01:intron 50.0%
CACATCAGCATGTTGGATGG+AGG + Chr1:29511979-29511960 None:intergenic 50.0%
CATCCAACATGCTGATGTGG+CGG + Chr1:29510820-29510801 None:intergenic 50.0%
CCACCAGGAACAATTGATCC+AGG + Chr1:29517574-29517593 None:intergenic 50.0%
CCCGGAAATGAGGTATGCTA+TGG + Chr1:29512876-29512895 None:intergenic 50.0%
CCTGGATCAATTGTTCCTGG+TGG - Chr1:29517571-29517590 MsG0180001930.01.T01:intron 50.0%
CGAGAGTTGCAGAGAACTGT+AGG + Chr1:29517361-29517380 None:intergenic 50.0%
CGATCTGATTGAGGAGCAGA+AGG + Chr1:29512980-29512999 None:intergenic 50.0%
CTCCATCCAACATGCTGATG+TGG - Chr1:29510798-29510817 MsG0180001930.01.T01:CDS 50.0%
CTCCATCCAACATGCTGATG+TGG + Chr1:29510817-29510798 None:intergenic 50.0%
CTCTAGTGCACAGTAGTGAC+AGG + Chr1:29514838-29514857 None:intergenic 50.0%
GAAGAGTCTAGTGTCCAACG+CGG - Chr1:29513726-29513745 MsG0180001930.01.T01:intron 50.0%
GAAGTGGAGAAGGTGAGAGA+GGG - Chr1:29512452-29512471 MsG0180001930.01.T01:intron 50.0%
GACCACATCAGCATGTTGGA+TGG + Chr1:29510803-29510822 None:intergenic 50.0%
GAGAAAACAAGTCCCTGCTC+AGG - Chr1:29514775-29514794 MsG0180001930.01.T01:intron 50.0%
GATGCCAGTATCTTGAGACC+CGG - Chr1:29517640-29517659 MsG0180001930.01.T01:intron 50.0%
GATGGTGTTTAGGTGAGCCT+GGG - Chr1:29517593-29517612 MsG0180001930.01.T01:intron 50.0%
GCTATCCCTCCCTTCAGATA+TGG + Chr1:29511636-29511655 None:intergenic 50.0%
GGGTCTAAGAATCCTGAGCA+GGG + Chr1:29514790-29514809 None:intergenic 50.0%
GGTAGCTAGAAAGATGCACC+TGG + Chr1:29511615-29511634 None:intergenic 50.0%
GGTTTGTAAATCGGTGGCCA+TGG - Chr1:29511462-29511481 MsG0180001930.01.T01:intron 50.0%
GTCAATTACCCCCTATGACG+TGG - Chr1:29511891-29511910 MsG0180001930.01.T01:intron 50.0%
GTCAGTGTTAGATACCGCGT+TGG + Chr1:29513743-29513762 None:intergenic 50.0%
TAACCGCCACATCAGCATGT+TGG - Chr1:29511953-29511972 MsG0180001930.01.T01:intron 50.0%
TAGGAGTAGACAACCTCCCT+CGG - Chr1:29517284-29517303 MsG0180001930.01.T01:intron 50.0%
TCACCTAAACACCATCCACC+AGG + Chr1:29517589-29517608 None:intergenic 50.0%
TGGAGGAAATTAACGGAGGG+GGG - Chr1:29511977-29511996 MsG0180001930.01.T01:intron 50.0%
TGGTCGATGAGATCGAGAAC+AGG + Chr1:29517532-29517551 None:intergenic 50.0%
TGTGGTCGTTAACTGCCATG+TGG - Chr1:29510816-29510835 MsG0180001930.01.T01:CDS 50.0%
TTCCGGGTCAAAGGGTGATT+CGG - Chr1:29512889-29512908 MsG0180001930.01.T01:intron 50.0%
TTGGTCGTAGATGATGCGGT+GGG + Chr1:29512828-29512847 None:intergenic 50.0%
! AGATGATGCGGTGGGTTTGA+TGG + Chr1:29512820-29512839 None:intergenic 50.0%
! ATGCTATGGAAGGTGGTGGT+GGG + Chr1:29512862-29512881 None:intergenic 50.0%
! GATGATGCGGTGGGTTTGAT+GGG + Chr1:29512819-29512838 None:intergenic 50.0%
! GTTAAGCATGTGCTGTTCCC+AGG + Chr1:29517613-29517632 None:intergenic 50.0%
! GTTCCTGGTGGATGGTGTTT+AGG - Chr1:29517583-29517602 MsG0180001930.01.T01:intron 50.0%
! TATGCTATGGAAGGTGGTGG+TGG + Chr1:29512863-29512882 None:intergenic 50.0%
! TGCTTTGATGGTCTAGGTCG+AGG - Chr1:29514079-29514098 MsG0180001930.01.T01:intron 50.0%
!! TGGAGAAGAGAGAGAGTGCT+AGG + Chr1:29512721-29512740 None:intergenic 50.0%
!! TTATGGAGTGCTGTGACACC+AGG - Chr1:29511594-29511613 MsG0180001930.01.T01:intron 50.0%
ACCCGAATCACCCTTTGACC+CGG + Chr1:29512894-29512913 None:intergenic 55.0%
AGGTGAGAGAGAGGATGAGG+AGG + Chr1:29512745-29512764 None:intergenic 55.0%
CACCCTTTGACCCGGAAATG+AGG + Chr1:29512886-29512905 None:intergenic 55.0%
CGAGAACAGGATCATCTGGC+TGG + Chr1:29517519-29517538 None:intergenic 55.0%
CGCCACATCAGCATGTTGGA+TGG - Chr1:29511957-29511976 MsG0180001930.01.T01:intron 55.0%
CTTGGTCGTAGATGATGCGG+TGG + Chr1:29512829-29512848 None:intergenic 55.0%
GAGAGAGAGGATGAGGAGGA+TGG + Chr1:29512741-29512760 None:intergenic 55.0%
GATCATGTGGCAGTGCCACA+TGG + Chr1:29510834-29510853 None:intergenic 55.0%
GATGGGTCGGGTAGAGGAAT+GGG + Chr1:29512802-29512821 None:intergenic 55.0%
GCTACGAGCATGCTGCCATT+TGG + Chr1:29515593-29515612 None:intergenic 55.0%
GGATGGTGTTTAGGTGAGCC+TGG - Chr1:29517592-29517611 MsG0180001930.01.T01:intron 55.0%
GGGGTCTAAGAATCCTGAGC+AGG + Chr1:29514791-29514810 None:intergenic 55.0%
GGTCCGATAGCAGCAAAGCA+AGG + Chr1:29515272-29515291 None:intergenic 55.0%
GTGCACTAGAGAGACGACCT+TGG - Chr1:29514847-29514866 MsG0180001930.01.T01:intron 55.0%
GTGGCCATGGCCTTTGATTG+CGG - Chr1:29511475-29511494 MsG0180001930.01.T01:intron 55.0%
GTTGTATCCGGCAACCGTGT+TGG - Chr1:29513830-29513849 MsG0180001930.01.T01:intron 55.0%
TCCGGGTCAAAGGGTGATTC+GGG - Chr1:29512890-29512909 MsG0180001930.01.T01:intron 55.0%
TGTGGCGGTTAACTGCCATG+TGG + Chr1:29511944-29511963 None:intergenic 55.0%
! ATGCGGTGGGTTTGATGGGT+CGG + Chr1:29512815-29512834 None:intergenic 55.0%
! GGTCAAAGGGTGATTCGGGT+CGG - Chr1:29512894-29512913 MsG0180001930.01.T01:intron 55.0%
! GTGATTCGGGTCGGATCCTT+AGG - Chr1:29512903-29512922 MsG0180001930.01.T01:intron 55.0%
! TGATGGGTCGGGTAGAGGAA+TGG + Chr1:29512803-29512822 None:intergenic 55.0%
! TGCTATGGAAGGTGGTGGTG+GGG + Chr1:29512861-29512880 None:intergenic 55.0%
!!! GTGGTGGGGTGGTTTTGTCT+TGG + Chr1:29512847-29512866 None:intergenic 55.0%
AGGGGGAAGAGGTGAGAGAG+AGG + Chr1:29512754-29512773 None:intergenic 60.0%
GACCATGTGGCAGTGCCACA+TGG - Chr1:29511926-29511945 MsG0180001930.01.T01:intron 60.0%
GGTCGGGTAGAGGAATGGGT+CGG + Chr1:29512798-29512817 None:intergenic 60.0%
GGTTGAGGAAGAGGGGGAAG+AGG + Chr1:29512765-29512784 None:intergenic 60.0%
GTCGGGTAGAGGAATGGGTC+GGG + Chr1:29512797-29512816 None:intergenic 60.0%
TGCCATGTGGCACTGCCACA+TGG + Chr1:29510848-29510829 None:intergenic 60.0%
! AGCGTGGGTTGAGGAAGAGG+GGG + Chr1:29512771-29512790 None:intergenic 60.0%
! CGAGCGTGGGTTGAGGAAGA+GGG + Chr1:29512773-29512792 None:intergenic 60.0%
! GAGCGTGGGTTGAGGAAGAG+GGG + Chr1:29512772-29512791 None:intergenic 60.0%
! GGGTTTGATGGGTCGGGTAG+AGG + Chr1:29512808-29512827 None:intergenic 60.0%
! TCGAGCGTGGGTTGAGGAAG+AGG + Chr1:29512774-29512793 None:intergenic 60.0%
! TGCGGTGGGTTTGATGGGTC+GGG + Chr1:29512814-29512833 None:intergenic 60.0%
!! TATGGAAGGTGGTGGTGGGG+TGG + Chr1:29512858-29512877 None:intergenic 60.0%
GAATGGGTCGGGTCGAGCGT+GGG + Chr1:29512786-29512805 None:intergenic 65.0%
GGAATGGGTCGGGTCGAGCG+TGG + Chr1:29512787-29512806 None:intergenic 70.0%
! GTCGGGTCGAGCGTGGGTTG+AGG + Chr1:29512780-29512799 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 29510218 29518051 29510218 ID=MsG0180001930.01;Name=MsG0180001930.01
Chr1 mRNA 29510218 29518051 29510218 ID=MsG0180001930.01.T01;Parent=MsG0180001930.01;Name=MsG0180001930.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0.33|0.66|1|1|3|310|249
Chr1 exon 29510218 29511033 29510218 ID=MsG0180001930.01.T01:exon:42261;Parent=MsG0180001930.01.T01
Chr1 exon 29515059 29515175 29515059 ID=MsG0180001930.01.T01:exon:42260;Parent=MsG0180001930.01.T01
Chr1 exon 29517925 29518051 29517925 ID=MsG0180001930.01.T01:exon:42259;Parent=MsG0180001930.01.T01
Chr1 CDS 29517925 29518051 29517925 ID=MsG0180001930.01.T01:cds;Parent=MsG0180001930.01.T01
Chr1 CDS 29515059 29515175 29515059 ID=MsG0180001930.01.T01:cds;Parent=MsG0180001930.01.T01
Chr1 CDS 29510528 29511033 29510528 ID=MsG0180001930.01.T01:cds;Parent=MsG0180001930.01.T01
Chr1 three_prime_UTR 29510218 29510527 29510218 ID=MsG0180001930.01.T01:three_prime_utr;Parent=MsG0180001930.01.T01
Gene Sequence

>MsG0180001930.01.T01

ATGTTCTCAACTACATTATCCATCAATGAAAAAGATGATAAAGTTACTCATGCTAAATTATCGCCAATCAAAATCATTCATTTGTCTTATGCTATTTATACCTTATCTTATAAGCATAATATACATGGCTCTTCTCCTGTTTCGTTTACTCTTCATGCTGCTGCTATTTTGATTCGTTTGTCTTTGAGATGGGATTGGTTTGTTAGTCTTAGTGCTGATTCTTACCCTCTTGTTACTCAAGATGGTTCATCTTTTTCTATTTTAAGTCGTAATTTTATGGAGTTTTGCATTTTAGGAGTAGACAACCTCCCTCGGATTCTACTGATGTATTTCTCAAACACACCATCATCCCTGTCCAATTATTTCCCTACAGTTCTCTGCAACTCTCGCCAATTTAACAAGACAGTCATAAATCAGGACTTTTTATATGCTGTTTATGACAGCCATAGAAACAATCTTCGACCACTCAATTCAACAGATTTTGATAACATGATTAATAGTGGAGCTGTCTTTGCAAAAAAATTCCAGCCAGATGATCCTGTTCTCGATCTCATCGACCAAAAAATTTTGAACCGAAGTCCTGGATCAATTGTTCCTGGTGGATGGTGTTTAGGTGAGCCTGGGAACAGCACATGCTTAACATGGGGTGATGCCAGTATCTTGAGACCCGGTAAAGGCTCTAAACGACTTGAGAAAGCAATTGTTGAATTGCTGTCAAATGGCACTTTCCGATCTCGACAATGTATATAG

Protein sequence

>MsG0180001930.01.T01

MFSTTLSINEKDDKVTHAKLSPIKIIHLSYAIYTLSYKHNIHGSSPVSFTLHAAAILIRLSLRWDWFVSLSADSYPLVTQDGSSFSILSRNFMEFCILGVDNLPRILLMYFSNTPSSLSNYFPTVLCNSRQFNKTVINQDFLYAVYDSHRNNLRPLNSTDFDNMINSGAVFAKKFQPDDPVLDLIDQKILNRSPGSIVPGGWCLGEPGNSTCLTWGDASILRPGKGSKRLEKAIVELLSNGTFRSRQCI*