AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008971.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008971.01.T01 MTR_2g450220 91.489 235 19 1 296 529 65 299 5.63e-158 452
MsG0280008971.01.T01 MTR_2g450210 96.491 228 8 0 22 249 1087 1314 5.82e-140 437
MsG0280008971.01.T01 MTR_2g450220 91.150 113 10 0 296 408 65 177 7.90e-71 226
MsG0280008971.01.T01 MTR_2g450210 100.000 57 0 0 22 78 1087 1143 7.41e-26 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008971.01.T01 AT4G30993 37.179 234 131 5 297 529 1 219 1.57e-36 135
MsG0280008971.01.T01 AT4G30993 37.447 235 131 5 296 529 66 285 1.90e-35 134
MsG0280008971.01.T01 AT5G58040 45.778 225 104 8 27 247 967 1177 5.11e-34 137
MsG0280008971.01.T01 AT5G58040 45.374 227 106 8 27 249 967 1179 5.34e-34 137
MsG0280008971.01.T01 AT4G30993 40.000 150 81 2 296 445 66 206 2.84e-24 101

Find 123 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGAAATCTCTTTCCTTA+TGG 0.255832 2:-42684119 None:intergenic
CACTTTCCTCTTGTGGCATA+AGG 0.258848 2:+42684894 MsG0280008971.01.T01:CDS
ATCTGCTAAAACAGTTGATT+TGG 0.281376 2:+42684230 MsG0280008971.01.T01:CDS
CTGCGAATTTCATAAATAAA+TGG 0.287299 2:-42688029 None:intergenic
ATGCATACCTTCTCATTTGA+TGG 0.311291 2:-42682638 None:intergenic
TTCTCATTTGATGGACCATT+TGG 0.316062 2:-42682629 None:intergenic
CAGAAGATCAATTTATCTAA+TGG 0.316343 2:+42687535 MsG0280008971.01.T01:CDS
ACTCATATGTGAACAGAATA+AGG 0.316678 2:+42687969 MsG0280008971.01.T01:CDS
GTTTCCTCTCGTGAAGTCTT+TGG 0.319211 2:-42682523 None:intergenic
ATTAGTGACCTCAATAGTTT+AGG 0.329248 2:+42682581 MsG0280008971.01.T01:CDS
ATGTAAATATTTGCAGTTGA+TGG 0.332545 2:+42688676 MsG0280008971.01.T01:exon
TAGCTCTTACCTGGATGATC+TGG 0.346547 2:+42684778 MsG0280008971.01.T01:intron
TTACAGAGGACGTTCTAAAC+TGG 0.360627 2:+42684083 MsG0280008971.01.T01:CDS
ACTTTCCTCTTGTGGCATAA+GGG 0.362007 2:+42684895 MsG0280008971.01.T01:CDS
GATGGTGATTCCAAGGAATC+AGG 0.366716 2:+42684309 MsG0280008971.01.T01:CDS
CTTCAGGCATCAAGGGTTGT+TGG 0.370243 2:-42684257 None:intergenic
ATCAACACCAATGATATCTA+AGG 0.380410 2:-42687563 None:intergenic
AGAAGATCAATTTATCTAAT+GGG 0.383571 2:+42687536 MsG0280008971.01.T01:CDS
CAATTTGCATTGAGCTGACT+TGG 0.385629 2:-42688428 None:intergenic
AAGAGGAAAGTGCCAGTATC+AGG 0.389378 2:-42684883 None:intergenic
AATGCCGTCCTGGTGTTTCC+TGG 0.397547 2:-42684034 None:intergenic
TCTACAGAATCCCTTGCTTC+AGG 0.417272 2:-42684273 None:intergenic
ACTACTAGAGCTGCAAAATC+AGG 0.418875 2:+42687487 MsG0280008971.01.T01:CDS
ATCAACGTCTTTGAACTTCA+AGG 0.427029 2:-42684160 None:intergenic
GTGCCGATCCCCTGATTCCT+TGG 0.429535 2:-42684319 None:intergenic
CCGCTGAAGAAAGGCGATCT+AGG 0.433881 2:+42682449 MsG0280008971.01.T01:CDS
TCTCTAGCTTCTTGATAACC+TGG 0.437408 2:-42684413 None:intergenic
TTCCTGGACAGGCGATGCCC+TGG 0.440223 2:-42684018 None:intergenic
TCCTGGACAGGCGATGCCCT+GGG 0.443635 2:-42684017 None:intergenic
GACGTTGATAAGAATAATAA+TGG 0.453954 2:+42684174 MsG0280008971.01.T01:CDS
ACCAATCGCGTTGCTTACAT+TGG 0.454678 2:+42688212 MsG0280008971.01.T01:CDS
CGTCCTGGTGTTTCCTGGAC+AGG 0.457079 2:-42684029 None:intergenic
GGGAAAACCTTAGATATCAT+TGG 0.459208 2:+42687556 MsG0280008971.01.T01:CDS
ATTCTGTAGACAGGGAGAGC+AGG 0.459548 2:+42684286 MsG0280008971.01.T01:CDS
AACTTCAGGCGCATTGTTGT+CGG 0.459758 2:+42687934 MsG0280008971.01.T01:intron
GTGAAGGGCTTGAAAGAATC+TGG 0.461923 2:+42683967 MsG0280008971.01.T01:intron
ATCCCTTGCTTCAGGCATCA+AGG 0.466639 2:-42684265 None:intergenic
TCCCAGGGCATCGCCTGTCC+AGG 0.467318 2:+42684016 MsG0280008971.01.T01:CDS
ACTTACTATGTAAGTTTAGC+AGG 0.468177 2:+42688607 MsG0280008971.01.T01:CDS
CTTCAGGATGTATATTTAAG+TGG 0.468508 2:+42688167 MsG0280008971.01.T01:intron
GGATGTATATTTAAGTGGAC+AGG 0.468913 2:+42688172 MsG0280008971.01.T01:intron
AATGGTGGGTCTTCTGAAGC+TGG 0.476563 2:+42684192 MsG0280008971.01.T01:CDS
TGTTTGACCTCTGACTCCAC+TGG 0.476873 2:-42684468 None:intergenic
TGAAGAAAGGCGATCTAGGC+AGG 0.478694 2:+42682453 MsG0280008971.01.T01:CDS
CTCTAGCTTCTTGATAACCT+GGG 0.485154 2:-42684412 None:intergenic
GGAATCAGGGGATCGGCACC+TGG 0.487189 2:+42684323 MsG0280008971.01.T01:CDS
ATCAATATACCGCTGAAGAA+AGG 0.488933 2:+42682440 MsG0280008971.01.T01:CDS
TCAGCCTCTCAACTGTGTCC+AGG 0.489608 2:-42684341 None:intergenic
TGCAAGCAAACAGTAGCAAC+TGG 0.489979 2:+42687811 MsG0280008971.01.T01:CDS
CATAAGGGTGTTCAAGCTCT+TGG 0.492249 2:+42684910 MsG0280008971.01.T01:CDS
CATCGGAAGAAATGCCGTCC+TGG 0.493065 2:-42684044 None:intergenic
GTCTTTGAACTTCAAGGAAG+AGG 0.496152 2:-42684154 None:intergenic
GTTGTGTGCAGCAGCGAGCT+TGG 0.501034 2:+42686866 MsG0280008971.01.T01:CDS
GTCAAAATGTAGCTCTTACC+TGG 0.502200 2:+42684769 MsG0280008971.01.T01:intron
TGGACAGACCTAAACTATTG+AGG 0.510014 2:-42682589 None:intergenic
ATGGTAAATCTGTCTTTAGC+AGG 0.512063 2:+42688279 MsG0280008971.01.T01:CDS
TGAGACAGAGAGCCTGATAC+TGG 0.513592 2:+42684871 MsG0280008971.01.T01:CDS
AAGCAAGGGATTCTGTAGAC+AGG 0.514921 2:+42684277 MsG0280008971.01.T01:CDS
CAGCGGTATATTGATTTCCA+CGG 0.516316 2:-42682432 None:intergenic
CAGTTGAGAGGCTGAAGAAA+CGG 0.517207 2:+42684349 MsG0280008971.01.T01:CDS
ACCCTTGATGCCTGAAGCAA+GGG 0.517611 2:+42684263 MsG0280008971.01.T01:CDS
TTCTGTTCACATATGAGTAG+TGG 0.519651 2:-42687964 None:intergenic
TCCCTTGCTTCAGGCATCAA+GGG 0.520538 2:-42684264 None:intergenic
ATACTGGCACTTTCCTCTTG+TGG 0.523963 2:+42684887 MsG0280008971.01.T01:CDS
CCAATCGCGTTGCTTACATT+GGG 0.526743 2:+42688213 MsG0280008971.01.T01:CDS
GAAGGTTGCAAAAGCTTACA+AGG 0.529998 2:+42686835 MsG0280008971.01.T01:CDS
ATGGTGATTCCAAGGAATCA+GGG 0.530033 2:+42684310 MsG0280008971.01.T01:CDS
GACGTTCTAAACTGGAGCGC+TGG 0.532082 2:+42684091 MsG0280008971.01.T01:CDS
AAGGCGATCTAGGCAGGAAA+GGG 0.534185 2:+42682459 MsG0280008971.01.T01:CDS
TTGAGCTGACTTGGTGAAGA+AGG 0.539693 2:-42688419 None:intergenic
TTCTGTAGACAGGGAGAGCA+GGG 0.542308 2:+42684287 MsG0280008971.01.T01:CDS
AACCCTTGATGCCTGAAGCA+AGG 0.544750 2:+42684262 MsG0280008971.01.T01:CDS
GGAGCGCTGGACAAGCCATA+AGG 0.545049 2:+42684104 MsG0280008971.01.T01:CDS
CGTGCTGAGCATGAAATCCC+AGG 0.551175 2:+42684000 MsG0280008971.01.T01:CDS
AGCGGTATATTGATTTCCAC+GGG 0.553898 2:-42682431 None:intergenic
AAAAGTCTAGAAAATCCAAA+TGG 0.556779 2:+42682614 MsG0280008971.01.T01:CDS
TTGATAAGAATAATAATGGT+GGG 0.559139 2:+42684178 MsG0280008971.01.T01:CDS
CCTAGATCGCCTTTCTTCAG+CGG 0.559668 2:-42682449 None:intergenic
GGAAACATAAAGAGGGCTCA+AGG 0.560503 2:+42682540 MsG0280008971.01.T01:CDS
AAAGGCGATCTAGGCAGGAA+AGG 0.564664 2:+42682458 MsG0280008971.01.T01:CDS
CCCAATGTAAGCAACGCGAT+TGG 0.567341 2:-42688213 None:intergenic
GAGCAGGGATGGTGATTCCA+AGG 0.572296 2:+42684302 MsG0280008971.01.T01:CDS
AGAATCTTGCTGTTCATCAT+CGG 0.573448 2:-42684061 None:intergenic
AGCTCTTACCTGGATGATCT+GGG 0.576098 2:+42684779 MsG0280008971.01.T01:intron
CGGGATGATGCTTATGCCCG+TGG 0.577370 2:+42682415 None:intergenic
GCTCATAACCCAGATCATCC+AGG 0.578854 2:-42684787 None:intergenic
GTTGCTTACATTGGGAACCC+TGG 0.582728 2:+42688221 MsG0280008971.01.T01:CDS
ATGGTGGGTCTTCTGAAGCT+GGG 0.582949 2:+42684193 MsG0280008971.01.T01:CDS
GGCTGAAGAAACGGAGTGAG+CGG 0.584754 2:+42684358 MsG0280008971.01.T01:CDS
GGACATACATTCTGCATGAG+TGG 0.586663 2:-42686899 None:intergenic
TTCCATCGTTGAGACTCCCA+TGG 0.589909 2:+42687337 MsG0280008971.01.T01:CDS
GTTCACATATGAGTAGTGGT+TGG 0.593728 2:-42687960 None:intergenic
GTAGACAGGGAGAGCAGGGA+TGG 0.594533 2:+42684291 MsG0280008971.01.T01:CDS
TCACGAGAGGAAACATAAAG+AGG 0.594779 2:+42682532 MsG0280008971.01.T01:CDS
TGGATGTATAACATTGTAGC+TGG 0.596081 2:+42684845 MsG0280008971.01.T01:CDS
AAATGGTCCATCAAATGAGA+AGG 0.597269 2:+42682631 MsG0280008971.01.T01:CDS
ATTCCAAGGAATCAGGGGAT+CGG 0.598056 2:+42684316 MsG0280008971.01.T01:CDS
GTTGATAAGAATAATAATGG+TGG 0.598974 2:+42684177 MsG0280008971.01.T01:CDS
TGCAGCTCTAGTAGTATAGG+TGG 0.599130 2:-42687479 None:intergenic
TTCTGAAGCTGGGAAACCTG+TGG 0.605513 2:+42684203 MsG0280008971.01.T01:CDS
TCGCCTGTCCAGGAAACACC+AGG 0.606281 2:+42684026 MsG0280008971.01.T01:CDS
GAACACCCTTATGCCACAAG+AGG 0.606301 2:-42684900 None:intergenic
ATCTCGAGGAGATCATTAAG+TGG 0.607760 2:+42687750 MsG0280008971.01.T01:CDS
TTTGAACTTCAAGGAAGAGG+AGG 0.610117 2:-42684151 None:intergenic
TGCCAAAACTGAAAATCCAG+TGG 0.611999 2:+42684452 MsG0280008971.01.T01:CDS
AGCAAGGGATTCTGTAGACA+GGG 0.614147 2:+42684278 MsG0280008971.01.T01:CDS
GTCGTGAACGTGAACAAGGT+TGG 0.615997 2:+42684825 MsG0280008971.01.T01:CDS
GGTGTTCATGAAGATGGAGA+AGG 0.622843 2:+42686817 MsG0280008971.01.T01:intron
GGCACCTGGACACAGTTGAG+AGG 0.628612 2:+42684337 MsG0280008971.01.T01:CDS
GTGTGCAGCAGCGAGCTTGG+AGG 0.629801 2:+42686869 MsG0280008971.01.T01:CDS
TGGTGATTCCAAGGAATCAG+GGG 0.632669 2:+42684311 MsG0280008971.01.T01:CDS
CACGAGAGGAAACATAAAGA+GGG 0.632791 2:+42682533 MsG0280008971.01.T01:CDS
TTGTGTCGTGAACGTGAACA+AGG 0.641375 2:+42684821 MsG0280008971.01.T01:CDS
GTGCTGAGCATGAAATCCCA+GGG 0.645222 2:+42684001 MsG0280008971.01.T01:CDS
AATTGAAGGACTCAATCTCG+AGG 0.653577 2:+42687736 MsG0280008971.01.T01:intron
CTGTCCAGGAAACACCAGGA+CGG 0.664135 2:+42684030 MsG0280008971.01.T01:CDS
AAATCAGGAGGAGAAGAAGT+CGG 0.667381 2:+42687502 MsG0280008971.01.T01:CDS
ACTAGAGCTGCAAAATCAGG+AGG 0.673556 2:+42687490 MsG0280008971.01.T01:CDS
TACCATGGGAGTCTCAACGA+TGG 0.687066 2:-42687339 None:intergenic
GAACAGCAAGATTCTTACAG+AGG 0.690758 2:+42684069 MsG0280008971.01.T01:CDS
ATAACCAAAGACTTCACGAG+AGG 0.696074 2:+42682519 MsG0280008971.01.T01:CDS
ATGTATAACATTGTAGCTGG+TGG 0.722224 2:+42684848 MsG0280008971.01.T01:CDS
TCTGGGTTATGAGCATCTAG+CGG 0.745720 2:+42684796 MsG0280008971.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATCATTTGATATAAT+TGG + Chr2:42687084-42687103 MsG0280008971.01.T01:intron 10.0%
!! AATACTAGTTAGATATAAAA+TGG - Chr2:42686923-42686942 None:intergenic 15.0%
!!! AAGTTATTTCTATAATCAAA+GGG + Chr2:42686495-42686514 MsG0280008971.01.T01:intron 15.0%
!!! AATTTTTAACATCTTCATTA+TGG + Chr2:42683050-42683069 MsG0280008971.01.T01:intron 15.0%
!!! ATTTTTATTAATTTAGAGCT+AGG - Chr2:42683546-42683565 None:intergenic 15.0%
!!! TAAGTTATTTCTATAATCAA+AGG + Chr2:42686494-42686513 MsG0280008971.01.T01:intron 15.0%
!!! TATCAAATGATTTTAAATTG+CGG - Chr2:42687080-42687099 None:intergenic 15.0%
!!! TATGATTAATTTTTCTTTCA+TGG + Chr2:42687257-42687276 MsG0280008971.01.T01:intron 15.0%
!!! TGAAGAAACTTATAATATTT+TGG + Chr2:42685496-42685515 MsG0280008971.01.T01:intron 15.0%
!!! TTAATTGTTTTGATTTTAGA+TGG + Chr2:42683492-42683511 MsG0280008971.01.T01:intron 15.0%
!!! TTATAATTGAAATCTAAGAT+TGG - Chr2:42685239-42685258 None:intergenic 15.0%
!!! TTTTGAATTTGAATTAGTAT+AGG - Chr2:42687864-42687883 None:intergenic 15.0%
!! AAACATTCAAACAATGTTAA+TGG - Chr2:42686256-42686275 None:intergenic 20.0%
!! ACAGTGTACAATAAATTTAT+AGG - Chr2:42684691-42684710 None:intergenic 20.0%
!! AGAAAATCATGAATCATAAT+TGG - Chr2:42688471-42688490 None:intergenic 20.0%
!! AGAAGATCAATTTATCTAAT+GGG + Chr2:42687536-42687555 MsG0280008971.01.T01:CDS 20.0%
!! ATTTCTGTTGTTAAAACAAA+CGG + Chr2:42687115-42687134 MsG0280008971.01.T01:intron 20.0%
!! CAATTATAGCAAAAAAAAGT+AGG - Chr2:42686610-42686629 None:intergenic 20.0%
!! GTAAAATGTAAAACATTAAC+TGG + Chr2:42684719-42684738 MsG0280008971.01.T01:intron 20.0%
!! TTGATAAGAATAATAATGGT+GGG + Chr2:42684178-42684197 MsG0280008971.01.T01:CDS 20.0%
!!! AGTTTTAAGTTGTTTTCATA+AGG + Chr2:42686546-42686565 MsG0280008971.01.T01:intron 20.0%
!!! ATATCTTTTAACCATTTGAT+TGG + Chr2:42685349-42685368 MsG0280008971.01.T01:intron 20.0%
!!! ATCTTTTATACTTTTTTACG+CGG + Chr2:42685077-42685096 MsG0280008971.01.T01:intron 20.0%
!!! GTTGTTAAACTCATTTTTAT+AGG + Chr2:42686523-42686542 MsG0280008971.01.T01:intron 20.0%
!!! GTTTTAAGTTGTTTTCATAA+GGG + Chr2:42686547-42686566 MsG0280008971.01.T01:intron 20.0%
!!! TATCTTTTAACCATTTGATT+GGG + Chr2:42685350-42685369 MsG0280008971.01.T01:intron 20.0%
!!! TATTCAGTGACATTTTTTTT+TGG + Chr2:42688312-42688331 MsG0280008971.01.T01:intron 20.0%
!!! TCTTATTCAGTTTTTCTAAA+TGG + Chr2:42688260-42688279 MsG0280008971.01.T01:CDS 20.0%
! AAAAATCGTCAACTGATATT+TGG - Chr2:42685436-42685455 None:intergenic 25.0%
! AAAAGTCTAGAAAATCCAAA+TGG + Chr2:42682614-42682633 MsG0280008971.01.T01:CDS 25.0%
! AAACATTAACTGGTTATTAC+AGG + Chr2:42684729-42684748 MsG0280008971.01.T01:intron 25.0%
! AAATCACATGTAGTTAGATT+AGG + Chr2:42685157-42685176 MsG0280008971.01.T01:intron 25.0%
! ACAAAAACAATCAATTGCAT+TGG + Chr2:42687775-42687794 MsG0280008971.01.T01:CDS 25.0%
! AGAAAATCTTGAAAAACAAG+AGG - Chr2:42683868-42683887 None:intergenic 25.0%
! ATCAGTAACTAAATGAATTC+TGG + Chr2:42684519-42684538 MsG0280008971.01.T01:intron 25.0%
! CAAGGAAATTAAAGAATCTT+AGG - Chr2:42683665-42683684 None:intergenic 25.0%
! CAATAAATTTATAGGTAGTG+TGG - Chr2:42684683-42684702 None:intergenic 25.0%
! CAGAAGATCAATTTATCTAA+TGG + Chr2:42687535-42687554 MsG0280008971.01.T01:CDS 25.0%
! CGAAAAATTGCATATAAATG+CGG + Chr2:42687029-42687048 MsG0280008971.01.T01:intron 25.0%
! CTGCGAATTTCATAAATAAA+TGG - Chr2:42688032-42688051 None:intergenic 25.0%
! CTTGGTCAATTATATTGAAT+GGG + Chr2:42687424-42687443 MsG0280008971.01.T01:intron 25.0%
! TAATTTATCTTCTCCATAAC+AGG + Chr2:42688582-42688601 MsG0280008971.01.T01:intron 25.0%
! TAGAAGAAGAATTTAAACTG+AGG + Chr2:42686969-42686988 MsG0280008971.01.T01:intron 25.0%
! TATAAGTGATAAGAAACATG+AGG + Chr2:42685528-42685547 MsG0280008971.01.T01:intron 25.0%
! TATCAAATTGAACGAATCAA+TGG - Chr2:42687239-42687258 None:intergenic 25.0%
! TATGAATTTCTTGACAAGAA+CGG + Chr2:42686279-42686298 MsG0280008971.01.T01:intron 25.0%
! TCATGAATCATAATTGGATT+TGG - Chr2:42688465-42688484 None:intergenic 25.0%
! TGAAGAGTAAATACAATACA+AGG - Chr2:42688152-42688171 None:intergenic 25.0%
! TGATTGATGAAGCATATATT+TGG + Chr2:42686383-42686402 MsG0280008971.01.T01:intron 25.0%
! TTAACACTCACTTTCTTATT+GGG - Chr2:42683238-42683257 None:intergenic 25.0%
! TTATTGAAACGCATGAATTA+TGG - Chr2:42686652-42686671 None:intergenic 25.0%
! TTGCTTATCGTTATTTGTAT+GGG + Chr2:42683383-42683402 MsG0280008971.01.T01:intron 25.0%
! TTGGTCAATTATATTGAATG+GGG + Chr2:42687425-42687444 MsG0280008971.01.T01:intron 25.0%
! TTGTATTGTATTTACTCTTC+AGG + Chr2:42688151-42688170 MsG0280008971.01.T01:intron 25.0%
! TTTAACACTCACTTTCTTAT+TGG - Chr2:42683239-42683258 None:intergenic 25.0%
!! ATAGTTAGTTTCTATTGTGA+AGG + Chr2:42683951-42683970 MsG0280008971.01.T01:intron 25.0%
!! CTAAGATTCTTTAATTTCCT+TGG + Chr2:42683663-42683682 MsG0280008971.01.T01:intron 25.0%
!! GACGTTGATAAGAATAATAA+TGG + Chr2:42684174-42684193 MsG0280008971.01.T01:CDS 25.0%
!! GTTGATAAGAATAATAATGG+TGG + Chr2:42684177-42684196 MsG0280008971.01.T01:CDS 25.0%
!! TAGTTAGTTTCTATTGTGAA+GGG + Chr2:42683952-42683971 MsG0280008971.01.T01:intron 25.0%
!! TCTAAAAGCACAAAGAAAAT+AGG - Chr2:42685941-42685960 None:intergenic 25.0%
!!! ACGATTTTTTAGTTTTCCAA+AGG + Chr2:42685447-42685466 MsG0280008971.01.T01:intron 25.0%
!!! ATTAGTATAGGATTTTGAGA+AGG - Chr2:42687852-42687871 None:intergenic 25.0%
!!! GATTATTTGTTGATGATGAT+TGG - Chr2:42686159-42686178 None:intergenic 25.0%
!!! TAAAAGTTGATAATCCTAAC+AGG - Chr2:42682952-42682971 None:intergenic 25.0%
!!! TTACCACTTTGATTTGATTT+TGG + Chr2:42686013-42686032 MsG0280008971.01.T01:intron 25.0%
!!! TTTGTGTTGTTTTAGAGAAT+TGG + Chr2:42688386-42688405 MsG0280008971.01.T01:intron 25.0%
AAAACGATTTCCCAATCAAA+TGG - Chr2:42685363-42685382 None:intergenic 30.0%
AAAGATAACATACTGCAAAG+AGG - Chr2:42687371-42687390 None:intergenic 30.0%
AAATCTTGAAAAACAAGAGG+AGG - Chr2:42683865-42683884 None:intergenic 30.0%
AAGATTGGAAGACTTGAAAA+TGG - Chr2:42685224-42685243 None:intergenic 30.0%
AAGTGTCTATCATATTCCTT+TGG - Chr2:42685466-42685485 None:intergenic 30.0%
AATAAGAACATAGGTGTACT+TGG - Chr2:42686763-42686782 None:intergenic 30.0%
AATCAATGTGATAGAATTCC+TGG - Chr2:42683817-42683836 None:intergenic 30.0%
AATGTAGCTACAAGAAATTG+TGG - Chr2:42687165-42687184 None:intergenic 30.0%
AATTGTTAGTATTATGCCGA+GGG + Chr2:42686625-42686644 MsG0280008971.01.T01:intron 30.0%
ACAATTTCTTGTAGCTACAT+TGG + Chr2:42687164-42687183 MsG0280008971.01.T01:intron 30.0%
ACATAGTAAGTTACCTGTTA+TGG - Chr2:42688598-42688617 None:intergenic 30.0%
ACTCATATGTGAACAGAATA+AGG + Chr2:42687969-42687988 MsG0280008971.01.T01:CDS 30.0%
ACTCCAAAATCAAATCAAAG+TGG - Chr2:42686019-42686038 None:intergenic 30.0%
ACTTACTATGTAAGTTTAGC+AGG + Chr2:42688607-42688626 MsG0280008971.01.T01:CDS 30.0%
AGTAACTAAATGAATTCTGG+TGG + Chr2:42684522-42684541 MsG0280008971.01.T01:intron 30.0%
AGTCTGCAAAATAAGAACAT+AGG - Chr2:42686772-42686791 None:intergenic 30.0%
ATAGAACAAATTCATGACCA+TGG - Chr2:42688362-42688381 None:intergenic 30.0%
ATCAAATTGTAGATGCCATA+TGG + Chr2:42685003-42685022 MsG0280008971.01.T01:intron 30.0%
ATCAACACCAATGATATCTA+AGG - Chr2:42687566-42687585 None:intergenic 30.0%
ATCTAGTCTAGATACAACAA+AGG - Chr2:42685126-42685145 None:intergenic 30.0%
ATCTGCTAAAACAGTTGATT+TGG + Chr2:42684230-42684249 MsG0280008971.01.T01:CDS 30.0%
ATTAGTGACCTCAATAGTTT+AGG + Chr2:42682581-42682600 MsG0280008971.01.T01:CDS 30.0%
CAACAAAGAAGTAATCCATA+TGG - Chr2:42685021-42685040 None:intergenic 30.0%
CACATGGTTTCATTATATGA+CGG + Chr2:42687286-42687305 MsG0280008971.01.T01:intron 30.0%
CCAACAAGTCAAATAATAAC+AGG - Chr2:42682791-42682810 None:intergenic 30.0%
CCATTAAAACTTCAATCAAC+AGG + Chr2:42685310-42685329 MsG0280008971.01.T01:intron 30.0%
CCATTCAATATAATTGACCA+AGG - Chr2:42687426-42687445 None:intergenic 30.0%
CCTTGGTCAATTATATTGAA+TGG + Chr2:42687423-42687442 MsG0280008971.01.T01:intron 30.0%
CTTCAGGATGTATATTTAAG+TGG + Chr2:42688167-42688186 MsG0280008971.01.T01:intron 30.0%
CTTGCTTATCGTTATTTGTA+TGG + Chr2:42683382-42683401 MsG0280008971.01.T01:intron 30.0%
GAATTAATTATAGTCCACGT+TGG - Chr2:42685597-42685616 None:intergenic 30.0%
TAATTGTTAGTATTATGCCG+AGG + Chr2:42686624-42686643 MsG0280008971.01.T01:intron 30.0%
TACAAATAACGATAAGCAAG+AGG - Chr2:42683382-42683401 None:intergenic 30.0%
TACTGAAATCTCTTTCCTTA+TGG - Chr2:42684122-42684141 None:intergenic 30.0%
TAGGAGATATAAGGTTAACT+TGG - Chr2:42686675-42686694 None:intergenic 30.0%
TCATGACATTAGGAGATATA+AGG - Chr2:42686684-42686703 None:intergenic 30.0%
TGAAAATAGCTCATGACATT+AGG - Chr2:42686694-42686713 None:intergenic 30.0%
TGATTAAAAATAACACAGCC+AGG - Chr2:42684987-42685006 None:intergenic 30.0%
TGCTTCCTAGAATCAAAATT+GGG + Chr2:42682734-42682753 MsG0280008971.01.T01:intron 30.0%
TTCCTTAAAGTCATAAGAGA+GGG - Chr2:42686323-42686342 None:intergenic 30.0%
TTGAAACAAAATGTGTGATG+AGG + Chr2:42683004-42683023 MsG0280008971.01.T01:intron 30.0%
TTTCCTTAAAGTCATAAGAG+AGG - Chr2:42686324-42686343 None:intergenic 30.0%
TTTGAAAATATCGCTATCCT+TGG + Chr2:42687406-42687425 MsG0280008971.01.T01:intron 30.0%
! AAATGAGAAGGTATGCATTA+CGG + Chr2:42682643-42682662 MsG0280008971.01.T01:intron 30.0%
! AATCTGATATAGTCTAGCTT+TGG + Chr2:42684564-42684583 MsG0280008971.01.T01:intron 30.0%
! AGAGCTAACATTTTCTTGTT+TGG + Chr2:42685958-42685977 MsG0280008971.01.T01:intron 30.0%
! ATTACAGGTGACACATATTT+TGG + Chr2:42684744-42684763 MsG0280008971.01.T01:intron 30.0%
! CATTAATGGCAATTTAAAGC+TGG - Chr2:42682863-42682882 None:intergenic 30.0%
! TGGATTTTCTAGACTTTTCT+TGG - Chr2:42682612-42682631 None:intergenic 30.0%
! TTACAGGTGACACATATTTT+GGG + Chr2:42684745-42684764 MsG0280008971.01.T01:intron 30.0%
! TTCTTGAGATTTTGTTCACA+AGG + Chr2:42683728-42683747 MsG0280008971.01.T01:intron 30.0%
!! ACATTGATTGCATTTTCCAT+TGG + Chr2:42683828-42683847 MsG0280008971.01.T01:intron 30.0%
!! ATCTGATATAGTCTAGCTTT+GGG + Chr2:42684565-42684584 MsG0280008971.01.T01:intron 30.0%
!! ATTATTTGACTTGTTGGTTC+AGG + Chr2:42682794-42682813 MsG0280008971.01.T01:intron 30.0%
!! CCTGTTATTATTTGACTTGT+TGG + Chr2:42682788-42682807 MsG0280008971.01.T01:intron 30.0%
!! CCTGTTGATTGAAGTTTTAA+TGG - Chr2:42685313-42685332 None:intergenic 30.0%
!! TAATCTACACCATTGATTTG+AGG + Chr2:42686174-42686193 MsG0280008971.01.T01:intron 30.0%
!! TATAAAGAGAATTGGTTTGC+AGG + Chr2:42687452-42687471 MsG0280008971.01.T01:intron 30.0%
!! TTTCTTTTTCACTTGGCATT+GGG - Chr2:42684392-42684411 None:intergenic 30.0%
!! TTTGTAGCGTCATTTTGTTT+GGG + Chr2:42683318-42683337 MsG0280008971.01.T01:intron 30.0%
!! TTTTGTAGCGTCATTTTGTT+TGG + Chr2:42683317-42683336 MsG0280008971.01.T01:intron 30.0%
!!! GTTTGCTTTTCTGAAATTGA+AGG + Chr2:42687722-42687741 MsG0280008971.01.T01:intron 30.0%
!!! TCACTTTTTTTCGTTCTTTC+CGG + Chr2:42686796-42686815 MsG0280008971.01.T01:intron 30.0%
!!! TGTTTTAGAGAATTGGCTAA+TGG + Chr2:42688393-42688412 MsG0280008971.01.T01:intron 30.0%
!!! TTTGATTTTGGAGTGTGTTT+AGG + Chr2:42686025-42686044 MsG0280008971.01.T01:intron 30.0%
AAAATGGGTCCCACATAAAA+TGG - Chr2:42683187-42683206 None:intergenic 35.0%
AAATGGTCCATCAAATGAGA+AGG + Chr2:42682631-42682650 MsG0280008971.01.T01:CDS 35.0%
AATCTAAGCATGATCCTATC+AGG - Chr2:42683619-42683638 None:intergenic 35.0%
ACAACTCCATCTTCTCAATA+TGG + Chr2:42685898-42685917 MsG0280008971.01.T01:intron 35.0%
AGAAAAAGCAACCACAACAA+CGG - Chr2:42687001-42687020 None:intergenic 35.0%
AGCATACCATATTGAGAAGA+TGG - Chr2:42685907-42685926 None:intergenic 35.0%
ATAACATACTGCAAAGAGGA+TGG - Chr2:42687367-42687386 None:intergenic 35.0%
ATATATCTCAAACCCTTGCA+AGG - Chr2:42684635-42684654 None:intergenic 35.0%
ATCAACGTCTTTGAACTTCA+AGG - Chr2:42684163-42684182 None:intergenic 35.0%
ATCAATATACCGCTGAAGAA+AGG + Chr2:42682440-42682459 MsG0280008971.01.T01:CDS 35.0%
ATCTACTTCATCAGTGTCAA+TGG + Chr2:42685854-42685873 MsG0280008971.01.T01:intron 35.0%
ATGCATACCTTCTCATTTGA+TGG - Chr2:42682641-42682660 None:intergenic 35.0%
ATGGTAAATCTGTCTTTAGC+AGG + Chr2:42688279-42688298 MsG0280008971.01.T01:CDS 35.0%
ATGTATAACATTGTAGCTGG+TGG + Chr2:42684848-42684867 MsG0280008971.01.T01:CDS 35.0%
ATTGCATATAAATGCGGACA+TGG + Chr2:42687035-42687054 MsG0280008971.01.T01:intron 35.0%
CACATAATACATGGAAAGGA+AGG + Chr2:42682818-42682837 MsG0280008971.01.T01:intron 35.0%
CATGAGGAAGAGAACAAAAA+AGG + Chr2:42685544-42685563 MsG0280008971.01.T01:intron 35.0%
CCATTTAACATTAGTAAGCC+AGG + Chr2:42683796-42683815 MsG0280008971.01.T01:intron 35.0%
CCTAGAATCAAAATTGGGTT+GGG + Chr2:42682739-42682758 MsG0280008971.01.T01:intron 35.0%
CCTGGCTTACTAATGTTAAA+TGG - Chr2:42683799-42683818 None:intergenic 35.0%
CTTATTGAGTGAAACACACA+TGG + Chr2:42683155-42683174 MsG0280008971.01.T01:intron 35.0%
CTTCCTTTCCATGTATTATG+TGG - Chr2:42682820-42682839 None:intergenic 35.0%
GAATCATAATTGGATTTGGC+TGG - Chr2:42688461-42688480 None:intergenic 35.0%
GGATGTATATTTAAGTGGAC+AGG + Chr2:42688172-42688191 MsG0280008971.01.T01:intron 35.0%
GGGAAAACCTTAGATATCAT+TGG + Chr2:42687556-42687575 MsG0280008971.01.T01:CDS 35.0%
GGGGTAGTTATAAAGAGAAT+TGG + Chr2:42687444-42687463 MsG0280008971.01.T01:intron 35.0%
GTGCTTCCTAGAATCAAAAT+TGG + Chr2:42682733-42682752 MsG0280008971.01.T01:intron 35.0%
TAAGTGAGAAACATCTCGAA+GGG + Chr2:42684933-42684952 MsG0280008971.01.T01:intron 35.0%
TACTTGGAAAGTGGTCTAAA+TGG + Chr2:42685706-42685725 MsG0280008971.01.T01:intron 35.0%
TATTGAGAAGATGGAGTTGT+TGG - Chr2:42685898-42685917 None:intergenic 35.0%
TCCTAGAATCAAAATTGGGT+TGG + Chr2:42682738-42682757 MsG0280008971.01.T01:intron 35.0%
TCTTTCATGGAAATGACACA+TGG + Chr2:42687270-42687289 MsG0280008971.01.T01:intron 35.0%
TGGATGTATAACATTGTAGC+TGG + Chr2:42684845-42684864 MsG0280008971.01.T01:CDS 35.0%
TTCATCTCTTTGTCAACTTC+AGG + Chr2:42687920-42687939 MsG0280008971.01.T01:intron 35.0%
TTCCCTCTCTTATGACTTTA+AGG + Chr2:42686318-42686337 MsG0280008971.01.T01:intron 35.0%
TTCTGGTGGTCTAAGTTTAA+TGG + Chr2:42684536-42684555 MsG0280008971.01.T01:intron 35.0%
TTCTGTTCACATATGAGTAG+TGG - Chr2:42687967-42687986 None:intergenic 35.0%
TTGTGTTGAGTAATGTCTGA+GGG - Chr2:42685811-42685830 None:intergenic 35.0%
TTTGTGTTGAGTAATGTCTG+AGG - Chr2:42685812-42685831 None:intergenic 35.0%
! GTAAAATCTGAAACTGTAGC+TGG + Chr2:42682672-42682691 MsG0280008971.01.T01:intron 35.0%
! TAGATCTAGAATCCTTGCAA+GGG + Chr2:42684620-42684639 MsG0280008971.01.T01:intron 35.0%
! TTCTCATTTGATGGACCATT+TGG - Chr2:42682632-42682651 None:intergenic 35.0%
!! AGAATCTTGCTGTTCATCAT+CGG - Chr2:42684064-42684083 None:intergenic 35.0%
!! ATTCTTTTTCATTCACGCCA+GGG - Chr2:42688241-42688260 None:intergenic 35.0%
!! CATATGCTGAAGTTTTGACA+TGG + Chr2:42688096-42688115 MsG0280008971.01.T01:intron 35.0%
!! GTTTCTTTTTCACTTGGCAT+TGG - Chr2:42684393-42684412 None:intergenic 35.0%
!! TCTGATATAGTCTAGCTTTG+GGG + Chr2:42684566-42684585 MsG0280008971.01.T01:intron 35.0%
!! TTTAAAAGCATCAGCCTAAG+TGG - Chr2:42684597-42684616 None:intergenic 35.0%
!! TTTTGCAGCTCTAGTAGTAT+AGG - Chr2:42687485-42687504 None:intergenic 35.0%
AAATCAGGAGGAGAAGAAGT+CGG + Chr2:42687502-42687521 MsG0280008971.01.T01:CDS 40.0%
AATTGAAGGACTCAATCTCG+AGG + Chr2:42687736-42687755 MsG0280008971.01.T01:intron 40.0%
ACTACTAGAGCTGCAAAATC+AGG + Chr2:42687487-42687506 MsG0280008971.01.T01:CDS 40.0%
ACTTTCCAAGTAACATGGGA+GGG - Chr2:42685698-42685717 None:intergenic 40.0%
ACTTTCCTCTTGTGGCATAA+GGG + Chr2:42684895-42684914 MsG0280008971.01.T01:CDS 40.0%
AGAATCTTAGGTCAAATCGC+AGG - Chr2:42683653-42683672 None:intergenic 40.0%
AGACCACTTTCCAAGTAACA+TGG - Chr2:42685703-42685722 None:intergenic 40.0%
AGACTCTACTTGTGCAAAGT+AGG + Chr2:42682972-42682991 MsG0280008971.01.T01:intron 40.0%
AGGCCACATAATACATGGAA+AGG + Chr2:42682814-42682833 MsG0280008971.01.T01:intron 40.0%
AGTTAGGTGAGCAGCATTAA+TGG - Chr2:42682877-42682896 None:intergenic 40.0%
ATAACCAAAGACTTCACGAG+AGG + Chr2:42682519-42682538 MsG0280008971.01.T01:CDS 40.0%
ATCTCGAGGAGATCATTAAG+TGG + Chr2:42687750-42687769 MsG0280008971.01.T01:CDS 40.0%
ATGCAAGTTGCCAATTTCTC+TGG - Chr2:42683436-42683455 None:intergenic 40.0%
ATGGTGATTCCAAGGAATCA+GGG + Chr2:42684310-42684329 MsG0280008971.01.T01:CDS 40.0%
CAATTTGCATTGAGCTGACT+TGG - Chr2:42688431-42688450 None:intergenic 40.0%
CACGAGAGGAAACATAAAGA+GGG + Chr2:42682533-42682552 MsG0280008971.01.T01:CDS 40.0%
CTCTACATTGCTCTCAACTT+AGG + Chr2:42685782-42685801 MsG0280008971.01.T01:intron 40.0%
CTTAGCAGCATCAATTACCA+TGG + Chr2:42688342-42688361 MsG0280008971.01.T01:intron 40.0%
GAACAGCAAGATTCTTACAG+AGG + Chr2:42684069-42684088 MsG0280008971.01.T01:CDS 40.0%
GAAGGTTGCAAAAGCTTACA+AGG + Chr2:42686835-42686854 MsG0280008971.01.T01:CDS 40.0%
GACAAAACCATGCCTCAAAA+GGG - Chr2:42682930-42682949 None:intergenic 40.0%
GACCACTTTCCAAGTAACAT+GGG - Chr2:42685702-42685721 None:intergenic 40.0%
GTAAGTGAGAAACATCTCGA+AGG + Chr2:42684932-42684951 MsG0280008971.01.T01:intron 40.0%
GTCAAAATGTAGCTCTTACC+TGG + Chr2:42684769-42684788 MsG0280008971.01.T01:intron 40.0%
GTCTTTGAACTTCAAGGAAG+AGG - Chr2:42684157-42684176 None:intergenic 40.0%
GTTCACATATGAGTAGTGGT+TGG - Chr2:42687963-42687982 None:intergenic 40.0%
TACTTCATCAGTGTCAATGG+TGG + Chr2:42685857-42685876 MsG0280008971.01.T01:intron 40.0%
TCACGAGAGGAAACATAAAG+AGG + Chr2:42682532-42682551 MsG0280008971.01.T01:CDS 40.0%
TCTTGAAAAACAAGAGGAGG+CGG - Chr2:42683862-42683881 None:intergenic 40.0%
TGCCAAAACTGAAAATCCAG+TGG + Chr2:42684452-42684471 MsG0280008971.01.T01:CDS 40.0%
TGGACAGACCTAAACTATTG+AGG - Chr2:42682592-42682611 None:intergenic 40.0%
TGGTGGTCTAAGTTTAATGG+AGG + Chr2:42684539-42684558 MsG0280008971.01.T01:intron 40.0%
TTACACCTCTTTCAGCACAT+TGG - Chr2:42683693-42683712 None:intergenic 40.0%
TTCCAAACTCTTGCTGATGT+TGG + Chr2:42683893-42683912 MsG0280008971.01.T01:intron 40.0%
TTCCAACATCAGCAAGAGTT+TGG - Chr2:42683898-42683917 None:intergenic 40.0%
TTCTCCATCTTCATGAACAC+CGG - Chr2:42686818-42686837 None:intergenic 40.0%
TTTGAACTTCAAGGAAGAGG+AGG - Chr2:42684154-42684173 None:intergenic 40.0%
! AAGTCACGCCACTTTGAAAA+TGG - Chr2:42683203-42683222 None:intergenic 40.0%
! ACTGATCCATCTCCTTTTTC+TGG - Chr2:42684505-42684524 None:intergenic 40.0%
! AGTCACGCCACTTTGAAAAT+GGG - Chr2:42683202-42683221 None:intergenic 40.0%
! ATGGATCCCACCATTTTATG+TGG + Chr2:42683174-42683193 MsG0280008971.01.T01:intron 40.0%
! CTAGATCTAGAATCCTTGCA+AGG + Chr2:42684619-42684638 MsG0280008971.01.T01:intron 40.0%
! CTCCACTGGATTTTCAGTTT+TGG - Chr2:42684457-42684476 None:intergenic 40.0%
! CTCTAGCTTCTTGATAACCT+GGG - Chr2:42684415-42684434 None:intergenic 40.0%
! CTGATCCATCTCCTTTTTCT+GGG - Chr2:42684504-42684523 None:intergenic 40.0%
! TCGTTATTTGTATGGGTTGC+TGG + Chr2:42683390-42683409 MsG0280008971.01.T01:intron 40.0%
! TCTCTAGCTTCTTGATAACC+TGG - Chr2:42684416-42684435 None:intergenic 40.0%
! TGGATCCCACCATTTTATGT+GGG + Chr2:42683175-42683194 MsG0280008971.01.T01:intron 40.0%
! TTACAGAGGACGTTCTAAAC+TGG + Chr2:42684083-42684102 MsG0280008971.01.T01:CDS 40.0%
!! ACCATTGATTTGAGGTTGGA+CGG + Chr2:42686182-42686201 MsG0280008971.01.T01:intron 40.0%
!! ACCTGGGTTTCTTTTTCACT+TGG - Chr2:42684399-42684418 None:intergenic 40.0%
!! AGCGGTATATTGATTTCCAC+GGG - Chr2:42682434-42682453 None:intergenic 40.0%
!! CAAAATTGGGTTGGGAGTTA+TGG + Chr2:42682747-42682766 MsG0280008971.01.T01:intron 40.0%
!! CAGCGGTATATTGATTTCCA+CGG - Chr2:42682435-42682454 None:intergenic 40.0%
!! CTACACCATTGATTTGAGGT+TGG + Chr2:42686178-42686197 MsG0280008971.01.T01:intron 40.0%
!! GATTCTTTTTCATTCACGCC+AGG - Chr2:42688242-42688261 None:intergenic 40.0%
!! GGATTTTCAGTTTTGGCAGA+AGG - Chr2:42684450-42684469 None:intergenic 40.0%
!! GTTTTAGCAGATTCATCCAC+AGG - Chr2:42684222-42684241 None:intergenic 40.0%
!!! CCCAACCCAATTTTGATTCT+AGG - Chr2:42682742-42682761 None:intergenic 40.0%
AAATGCGGACATGGTCACAA+CGG + Chr2:42687044-42687063 MsG0280008971.01.T01:intron 45.0%
AACTTCAGGCGCATTGTTGT+CGG + Chr2:42687934-42687953 MsG0280008971.01.T01:intron 45.0%
AAGAGAGACCTCCCAGAAAA+AGG + Chr2:42684490-42684509 MsG0280008971.01.T01:intron 45.0%
AAGAGGACTGCCAGAGAAAT+TGG + Chr2:42683423-42683442 MsG0280008971.01.T01:intron 45.0%
AAGCAAGGGATTCTGTAGAC+AGG + Chr2:42684277-42684296 MsG0280008971.01.T01:CDS 45.0%
AAGCATGATCCTATCAGGTG+AGG - Chr2:42683614-42683633 None:intergenic 45.0%
ACCAATCGCGTTGCTTACAT+TGG + Chr2:42688212-42688231 MsG0280008971.01.T01:CDS 45.0%
ACCGTCCAACCTCAAATCAA+TGG - Chr2:42686186-42686205 None:intergenic 45.0%
ACGCATGAATTATGGACCCT+CGG - Chr2:42686644-42686663 None:intergenic 45.0%
ACTAGAGCTGCAAAATCAGG+AGG + Chr2:42687490-42687509 MsG0280008971.01.T01:CDS 45.0%
ACTTGTGCAAAGTAGGTGGA+TGG + Chr2:42682979-42682998 MsG0280008971.01.T01:intron 45.0%
AGAAACATCTCGAAGGGCAA+TGG + Chr2:42684939-42684958 MsG0280008971.01.T01:intron 45.0%
AGCAAGGGATTCTGTAGACA+GGG + Chr2:42684278-42684297 MsG0280008971.01.T01:CDS 45.0%
AGCTCTTACCTGGATGATCT+GGG + Chr2:42684779-42684798 MsG0280008971.01.T01:intron 45.0%
ATACTGGCACTTTCCTCTTG+TGG + Chr2:42684887-42684906 MsG0280008971.01.T01:CDS 45.0%
ATGACGGTCTATTCTTCCAC+AGG + Chr2:42687302-42687321 MsG0280008971.01.T01:intron 45.0%
ATGCTGCTCACCTAACTTCT+TGG + Chr2:42682880-42682899 MsG0280008971.01.T01:intron 45.0%
ATGGGTCCCACATAAAATGG+TGG - Chr2:42683184-42683203 None:intergenic 45.0%
ATTCCAAGGAATCAGGGGAT+CGG + Chr2:42684316-42684335 MsG0280008971.01.T01:CDS 45.0%
CACTTTCCAAGTAACATGGG+AGG - Chr2:42685699-42685718 None:intergenic 45.0%
CACTTTCCTCTTGTGGCATA+AGG + Chr2:42684894-42684913 MsG0280008971.01.T01:CDS 45.0%
CAGTTGAGAGGCTGAAGAAA+CGG + Chr2:42684349-42684368 MsG0280008971.01.T01:CDS 45.0%
CCAATCGCGTTGCTTACATT+GGG + Chr2:42688213-42688232 MsG0280008971.01.T01:CDS 45.0%
CTCTACTTGTGCAAAGTAGG+TGG + Chr2:42682975-42682994 MsG0280008971.01.T01:intron 45.0%
CTTGAAAAACAAGAGGAGGC+GGG - Chr2:42683861-42683880 None:intergenic 45.0%
CTTTCCGGTGTTCATGAAGA+TGG + Chr2:42686811-42686830 MsG0280008971.01.T01:intron 45.0%
GATGGTGATTCCAAGGAATC+AGG + Chr2:42684309-42684328 MsG0280008971.01.T01:CDS 45.0%
GCAAACAGTAGCAACTGGTA+TGG + Chr2:42687816-42687835 MsG0280008971.01.T01:intron 45.0%
GCCAAGTGAAAAAGAAACCC+AGG + Chr2:42684395-42684414 MsG0280008971.01.T01:CDS 45.0%
GGAAACATAAAGAGGGCTCA+AGG + Chr2:42682540-42682559 MsG0280008971.01.T01:CDS 45.0%
GGACAAAACCATGCCTCAAA+AGG - Chr2:42682931-42682950 None:intergenic 45.0%
GGACATACATTCTGCATGAG+TGG - Chr2:42686902-42686921 None:intergenic 45.0%
GGTGTTCATGAAGATGGAGA+AGG + Chr2:42686817-42686836 MsG0280008971.01.T01:intron 45.0%
GGTTCAGGCCACATAATACA+TGG + Chr2:42682809-42682828 MsG0280008971.01.T01:intron 45.0%
GTGAAGGGCTTGAAAGAATC+TGG + Chr2:42683967-42683986 MsG0280008971.01.T01:intron 45.0%
GTGTTCCAATGTGCTGAAAG+AGG + Chr2:42683685-42683704 MsG0280008971.01.T01:intron 45.0%
GTTTCCTCTCGTGAAGTCTT+TGG - Chr2:42682526-42682545 None:intergenic 45.0%
TAGCTCTTACCTGGATGATC+TGG + Chr2:42684778-42684797 MsG0280008971.01.T01:intron 45.0%
TCTACAGAATCCCTTGCTTC+AGG - Chr2:42684276-42684295 None:intergenic 45.0%
TCTGGGTTATGAGCATCTAG+CGG + Chr2:42684796-42684815 MsG0280008971.01.T01:CDS 45.0%
TGAAAATCCAGTGGAGTCAG+AGG + Chr2:42684461-42684480 MsG0280008971.01.T01:intron 45.0%
TGCAAGCAAACAGTAGCAAC+TGG + Chr2:42687811-42687830 MsG0280008971.01.T01:CDS 45.0%
TGCTGCTCACCTAACTTCTT+GGG + Chr2:42682881-42682900 MsG0280008971.01.T01:intron 45.0%
TGGGTCCCACATAAAATGGT+GGG - Chr2:42683183-42683202 None:intergenic 45.0%
TGGTGATTCCAAGGAATCAG+GGG + Chr2:42684311-42684330 MsG0280008971.01.T01:CDS 45.0%
TGTTGAGTAATGTCTGAGGG+TGG - Chr2:42685808-42685827 None:intergenic 45.0%
TTCAGCACATTGGAACACCA+AGG - Chr2:42683683-42683702 None:intergenic 45.0%
TTGAAAAACAAGAGGAGGCG+GGG - Chr2:42683860-42683879 None:intergenic 45.0%
TTGCTGGACCTGAAGAAAAG+AGG + Chr2:42683406-42683425 MsG0280008971.01.T01:intron 45.0%
TTGTGTCGTGAACGTGAACA+AGG + Chr2:42684821-42684840 MsG0280008971.01.T01:CDS 45.0%
! AAGAGATGCTGATTGCTTCC+TGG + Chr2:42684966-42684985 MsG0280008971.01.T01:intron 45.0%
! ATCCATCTCCTTTTTCTGGG+AGG - Chr2:42684501-42684520 None:intergenic 45.0%
! CTCCCATGTTACTTGGAAAG+TGG + Chr2:42685697-42685716 MsG0280008971.01.T01:intron 45.0%
! TGCAGCTCTAGTAGTATAGG+TGG - Chr2:42687482-42687501 None:intergenic 45.0%
! TGTGGGACCCATTTTCAAAG+TGG + Chr2:42683192-42683211 MsG0280008971.01.T01:intron 45.0%
! TTAGAAGACGTGCCCTTTTG+AGG + Chr2:42682915-42682934 MsG0280008971.01.T01:intron 45.0%
!! AAGAGGAAAGTGCCAGTATC+AGG - Chr2:42684886-42684905 None:intergenic 45.0%
!! CATAAGGGTGTTCAAGCTCT+TGG + Chr2:42684910-42684929 MsG0280008971.01.T01:CDS 45.0%
!! GCTTTGGGGAAATTCCACTT+AGG + Chr2:42684580-42684599 MsG0280008971.01.T01:intron 45.0%
!! TCAGTTTTGGCAGAAGGCAA+AGG - Chr2:42684444-42684463 None:intergenic 45.0%
!! TTGAGCTGACTTGGTGAAGA+AGG - Chr2:42688422-42688441 None:intergenic 45.0%
!!! AGGCATGGTTTTGTCCTGTT+AGG + Chr2:42682935-42682954 MsG0280008971.01.T01:intron 45.0%
AAAGGCGATCTAGGCAGGAA+AGG + Chr2:42682458-42682477 MsG0280008971.01.T01:CDS 50.0%
AACCCTTGATGCCTGAAGCA+AGG + Chr2:42684262-42684281 MsG0280008971.01.T01:CDS 50.0%
AAGGCGATCTAGGCAGGAAA+GGG + Chr2:42682459-42682478 MsG0280008971.01.T01:CDS 50.0%
ACCCTTGATGCCTGAAGCAA+GGG + Chr2:42684263-42684282 MsG0280008971.01.T01:CDS 50.0%
ATCCCTTGCTTCAGGCATCA+AGG - Chr2:42684268-42684287 None:intergenic 50.0%
ATTCTGTAGACAGGGAGAGC+AGG + Chr2:42684286-42684305 MsG0280008971.01.T01:CDS 50.0%
CAAAGAGGATGGCGTACCAT+GGG - Chr2:42687356-42687375 None:intergenic 50.0%
CACCAATCACATGTCCAACG+TGG + Chr2:42685580-42685599 MsG0280008971.01.T01:intron 50.0%
CCCAATGTAAGCAACGCGAT+TGG - Chr2:42688216-42688235 None:intergenic 50.0%
CCTAGATCGCCTTTCTTCAG+CGG - Chr2:42682452-42682471 None:intergenic 50.0%
CTGCTCACCTAACTTCTTGG+GGG + Chr2:42682883-42682902 MsG0280008971.01.T01:intron 50.0%
CTTCAGGCATCAAGGGTTGT+TGG - Chr2:42684260-42684279 None:intergenic 50.0%
GAACACCCTTATGCCACAAG+AGG - Chr2:42684903-42684922 None:intergenic 50.0%
GACCTCCCAGAAAAAGGAGA+TGG + Chr2:42684496-42684515 MsG0280008971.01.T01:intron 50.0%
GCTCATAACCCAGATCATCC+AGG - Chr2:42684790-42684809 None:intergenic 50.0%
GCTGCTCACCTAACTTCTTG+GGG + Chr2:42682882-42682901 MsG0280008971.01.T01:intron 50.0%
GGAAAACGAAGAGTTGCCTG+TGG - Chr2:42687321-42687340 None:intergenic 50.0%
GGTTGGGAGTTATGGTAAGC+TGG + Chr2:42682755-42682774 MsG0280008971.01.T01:intron 50.0%
GTCCACGTTGGACATGTGAT+TGG - Chr2:42685585-42685604 None:intergenic 50.0%
GTCGTGAACGTGAACAAGGT+TGG + Chr2:42684825-42684844 MsG0280008971.01.T01:CDS 50.0%
GTGCTGAGCATGAAATCCCA+GGG + Chr2:42684001-42684020 MsG0280008971.01.T01:CDS 50.0%
GTTGCTTACATTGGGAACCC+TGG + Chr2:42688221-42688240 MsG0280008971.01.T01:CDS 50.0%
GTTTGGGTCTCAGCATCATC+TGG + Chr2:42683334-42683353 MsG0280008971.01.T01:intron 50.0%
TACCATGGGAGTCTCAACGA+TGG - Chr2:42687342-42687361 None:intergenic 50.0%
TCCATGTAGCCTCACCTGAT+AGG + Chr2:42683602-42683621 MsG0280008971.01.T01:intron 50.0%
TCCCTTGCTTCAGGCATCAA+GGG - Chr2:42684267-42684286 None:intergenic 50.0%
TCCTATCAGGTGAGGCTACA+TGG - Chr2:42683606-42683625 None:intergenic 50.0%
TGAAAAACAAGAGGAGGCGG+GGG - Chr2:42683859-42683878 None:intergenic 50.0%
TGAAGAAAGGCGATCTAGGC+AGG + Chr2:42682453-42682472 MsG0280008971.01.T01:CDS 50.0%
TGAGACAGAGAGCCTGATAC+TGG + Chr2:42684871-42684890 MsG0280008971.01.T01:CDS 50.0%
TGCTCACCTAACTTCTTGGG+GGG + Chr2:42682884-42682903 MsG0280008971.01.T01:intron 50.0%
TGTTTGACCTCTGACTCCAC+TGG - Chr2:42684471-42684490 None:intergenic 50.0%
TTCCATCGTTGAGACTCCCA+TGG + Chr2:42687337-42687356 MsG0280008971.01.T01:CDS 50.0%
TTCTGTAGACAGGGAGAGCA+GGG + Chr2:42684287-42684306 MsG0280008971.01.T01:CDS 50.0%
! CTGGCAGTCCTCTTTTCTTC+AGG - Chr2:42683417-42683436 None:intergenic 50.0%
!! AATGGTGGGTCTTCTGAAGC+TGG + Chr2:42684192-42684211 MsG0280008971.01.T01:CDS 50.0%
!! ATGGTGGGTCTTCTGAAGCT+GGG + Chr2:42684193-42684212 MsG0280008971.01.T01:CDS 50.0%
!! TTCTGAAGCTGGGAAACCTG+TGG + Chr2:42684203-42684222 MsG0280008971.01.T01:CDS 50.0%
AATGCCGTCCTGGTGTTTCC+TGG - Chr2:42684037-42684056 None:intergenic 55.0%
CATCGGAAGAAATGCCGTCC+TGG - Chr2:42684047-42684066 None:intergenic 55.0%
CCGCTGAAGAAAGGCGATCT+AGG + Chr2:42682449-42682468 MsG0280008971.01.T01:CDS 55.0%
CGTGCTGAGCATGAAATCCC+AGG + Chr2:42684000-42684019 MsG0280008971.01.T01:CDS 55.0%
CTCACCTAACTTCTTGGGGG+GGG + Chr2:42682886-42682905 MsG0280008971.01.T01:intron 55.0%
CTGTCCAGGAAACACCAGGA+CGG + Chr2:42684030-42684049 MsG0280008971.01.T01:CDS 55.0%
GAAAAACAAGAGGAGGCGGG+GGG - Chr2:42683858-42683877 None:intergenic 55.0%
GAGCAGGGATGGTGATTCCA+AGG + Chr2:42684302-42684321 MsG0280008971.01.T01:CDS 55.0%
GCAAAGAGGATGGCGTACCA+TGG - Chr2:42687357-42687376 None:intergenic 55.0%
GCTCACCTAACTTCTTGGGG+GGG + Chr2:42682885-42682904 MsG0280008971.01.T01:intron 55.0%
GGCTGAAGAAACGGAGTGAG+CGG + Chr2:42684358-42684377 MsG0280008971.01.T01:CDS 55.0%
TCAGCCTCTCAACTGTGTCC+AGG - Chr2:42684344-42684363 None:intergenic 55.0%
TCTACCCCCCCCAAGAAGTT+AGG - Chr2:42682893-42682912 None:intergenic 55.0%
TGAGGTCACTGCCGTTGTTG+TGG + Chr2:42686987-42687006 MsG0280008971.01.T01:intron 55.0%
! GACGTTCTAAACTGGAGCGC+TGG + Chr2:42684091-42684110 MsG0280008971.01.T01:CDS 55.0%
!!! AGACGTGCCCTTTTGAGGCA+TGG + Chr2:42682920-42682939 MsG0280008971.01.T01:intron 55.0%
CGTCCTGGTGTTTCCTGGAC+AGG - Chr2:42684032-42684051 None:intergenic 60.0%
CTGCGCCCTCCCATGTTACT+TGG + Chr2:42685690-42685709 MsG0280008971.01.T01:intron 60.0%
GGCACCTGGACACAGTTGAG+AGG + Chr2:42684337-42684356 MsG0280008971.01.T01:CDS 60.0%
GTAGACAGGGAGAGCAGGGA+TGG + Chr2:42684291-42684310 MsG0280008971.01.T01:CDS 60.0%
GTTGTGTGCAGCAGCGAGCT+TGG + Chr2:42686866-42686885 MsG0280008971.01.T01:CDS 60.0%
TCGCCTGTCCAGGAAACACC+AGG + Chr2:42684026-42684045 MsG0280008971.01.T01:CDS 60.0%
! GTGCCGATCCCCTGATTCCT+TGG - Chr2:42684322-42684341 None:intergenic 60.0%
!! GGAGCGCTGGACAAGCCATA+AGG + Chr2:42684104-42684123 MsG0280008971.01.T01:CDS 60.0%
GGAATCAGGGGATCGGCACC+TGG + Chr2:42684323-42684342 MsG0280008971.01.T01:CDS 65.0%
GTGTGCAGCAGCGAGCTTGG+AGG + Chr2:42686869-42686888 MsG0280008971.01.T01:CDS 65.0%
TCCTGGACAGGCGATGCCCT+GGG - Chr2:42684020-42684039 None:intergenic 65.0%
TTCCTGGACAGGCGATGCCC+TGG - Chr2:42684021-42684040 None:intergenic 65.0%
GGAGGCGGGGGGAAGACCAA+TGG - Chr2:42683847-42683866 None:intergenic 70.0%
!! TCCCAGGGCATCGCCTGTCC+AGG + Chr2:42684016-42684035 MsG0280008971.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 42682419 42688697 42682419 ID=MsG0280008971.01;Name=MsG0280008971.01
Chr2 mRNA 42682419 42688697 42682419 ID=MsG0280008971.01.T01;Parent=MsG0280008971.01;Name=MsG0280008971.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0.87|0.88|1|0.62|0.64|17|16|529
Chr2 exon 42682419 42682652 42682419 ID=MsG0280008971.01.T01:exon:27225;Parent=MsG0280008971.01.T01
Chr2 exon 42683973 42684475 42683973 ID=MsG0280008971.01.T01:exon:27226;Parent=MsG0280008971.01.T01
Chr2 exon 42684781 42684931 42684781 ID=MsG0280008971.01.T01:exon:27227;Parent=MsG0280008971.01.T01
Chr2 exon 42686830 42686913 42686830 ID=MsG0280008971.01.T01:exon:27228;Parent=MsG0280008971.01.T01
Chr2 exon 42687324 42687358 42687324 ID=MsG0280008971.01.T01:exon:27229;Parent=MsG0280008971.01.T01
Chr2 exon 42687474 42687600 42687474 ID=MsG0280008971.01.T01:exon:27230;Parent=MsG0280008971.01.T01
Chr2 exon 42687744 42687832 42687744 ID=MsG0280008971.01.T01:exon:27231;Parent=MsG0280008971.01.T01
Chr2 exon 42687942 42688053 42687942 ID=MsG0280008971.01.T01:exon:27232;Parent=MsG0280008971.01.T01
Chr2 exon 42688173 42688300 42688173 ID=MsG0280008971.01.T01:exon:27233;Parent=MsG0280008971.01.T01
Chr2 exon 42688401 42688449 42688401 ID=MsG0280008971.01.T01:exon:27234;Parent=MsG0280008971.01.T01
Chr2 exon 42688604 42688697 42688604 ID=MsG0280008971.01.T01:exon:27235;Parent=MsG0280008971.01.T01
Chr2 CDS 42682419 42682652 42682419 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 CDS 42683973 42684475 42683973 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 CDS 42684781 42684931 42684781 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 CDS 42686830 42686913 42686830 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 CDS 42687324 42687358 42687324 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 CDS 42687474 42687600 42687474 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 CDS 42687744 42687832 42687744 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 CDS 42687942 42688053 42687942 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 CDS 42688173 42688300 42688173 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 CDS 42688401 42688449 42688401 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 CDS 42688604 42688681 42688604 ID=MsG0280008971.01.T01:cds;Parent=MsG0280008971.01.T01
Chr2 three_prime_UTR 42688682 42688697 42688682 ID=MsG0280008971.01.T01:three_prime_utr;Parent=MsG0280008971.01.T01
Gene Sequence

>MsG0280008971.01.T01

ATGATGCTTATGCCCGTGGAAATCAATATACCGCTGAAGAAAGGCGATCTAGGCAGGAAAGGGTCAAGTAGTCGTAGTGATCGTGTTGCTAATGCTTCAGATAACCAAAGACTTCACGAGAGGAAACATAAAGAGGGCTCAAGGAAAAGCAAAGAGCGTGATATTAGTGACCTCAATAGTTTAGGTCTGTCCAAGAAAAGTCTAGAAAATCCAAATGGTCCATCAAATGAGAAGGGCTTGAAAGAATCTGGTGATCAAGAACGTGCTGAGCATGAAATCCCAGGGCATCGCCTGTCCAGGAAACACCAGGACGGCATTTCTTCCGATGATGAACAGCAAGATTCTTACAGAGGACGTTCTAAACTGGAGCGCTGGACAAGCCATAAGGAAAGAGATTTCAGTATCAACAAGTCCTCCTCTTCCTTGAAGTTCAAAGACGTTGATAAGAATAATAATGGTGGGTCTTCTGAAGCTGGGAAACCTGTGGATGAATCTGCTAAAACAGTTGATTTGGATAACCAACAACCCTTGATGCCTGAAGCAAGGGATTCTGTAGACAGGGAGAGCAGGGATGGTGATTCCAAGGAATCAGGGGATCGGCACCTGGACACAGTTGAGAGGCTGAAGAAACGGAGTGAGCGGTTCAAGCTCCCAATGCCAAGTGAAAAAGAAACCCAGGTTATCAAGAAGCTAGAGAGTGAACCTTTGCCTTCTGCCAAAACTGAAAATCCAGTGGACTCTTACCTGGATGATCTGGGTTATGAGCATCTAGCGGCATTGTGTCGTGAACGTGAACAAGGTTGGATGTATAACATTGTAGCTGGTGGTGAGACAGAGAGCCTGATACTGGCACTTTCCTCTTGTGGCATAAGGGTGTTCAAGCTCTTGATGGAGAAGGTTGCAAAAGCTTACAAGGCAAGTTTTGTTGTGTGCAGCAGCGAGCTTGGAGGAGATGATCCACTCATGCAGAATGCAACTCTTCGTTTTCCATCGTTGAGACTCCCATGGTACACCACCTATACTACTAGAGCTGCAAAATCAGGAGGAGAAGAAGTCGGTTGCTTTGAGCAGAAGATCAATTTATCTAATGGGAAAACCTTAGATATCATTGGTGTTGATATTCAAGCACTGCAAGACTCAATCTCGAGGAGATCATTAAGTGGCAACAAAAACAATCAATTGCATTGGCTTCTCAGAACACTGCAAGCAAACAGTAGCAACTGGCGCATTGTTGTCGGATACCAACCACTACTCATATGTGAACAGAATAAGGAGAATATGAAGAAAATGAAAGCTTTTAAGTATTTGCACCATTTATTTATGAAATTCGCAGTAGATGTATATTTAAGTGGACAGGATTGCACTATTCAAGTCACCAATCGCGTTGCTTACATTGGGAACCCTGGCGTGAATGAAAAAGAATCTTATTCAGTTTTTCTAAATGGTAAATCTGTCTTTAGCAGAGAATTGGCTAATGGATTCCTTCTTCACCAAGTCAGCTCAATGCAAATTGTAACTTACTATGTAAGTTTAGCAGGTGAAGTTGCTTTTAAAACTGTTCTTCAAGAGAAGAGTACAGAAGTTATGTAA

Protein sequence

>MsG0280008971.01.T01

MMLMPVEINIPLKKGDLGRKGSSSRSDRVANASDNQRLHERKHKEGSRKSKERDISDLNSLGLSKKSLENPNGPSNEKGLKESGDQERAEHEIPGHRLSRKHQDGISSDDEQQDSYRGRSKLERWTSHKERDFSINKSSSSLKFKDVDKNNNGGSSEAGKPVDESAKTVDLDNQQPLMPEARDSVDRESRDGDSKESGDRHLDTVERLKKRSERFKLPMPSEKETQVIKKLESEPLPSAKTENPVDSYLDDLGYEHLAALCREREQGWMYNIVAGGETESLILALSSCGIRVFKLLMEKVAKAYKASFVVCSSELGGDDPLMQNATLRFPSLRLPWYTTYTTRAAKSGGEEVGCFEQKINLSNGKTLDIIGVDIQALQDSISRRSLSGNKNNQLHWLLRTLQANSSNWRIVVGYQPLLICEQNKENMKKMKAFKYLHHLFMKFAVDVYLSGQDCTIQVTNRVAYIGNPGVNEKESYSVFLNGKSVFSRELANGFLLHQVSSMQIVTYYVSLAGEVAFKTVLQEKSTEVM*