AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000732.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000732.01.T01 MTR_1g009620 98.842 691 2 1 1 691 1 685 0.0 1382
MsG0180000732.01.T01 MTR_4g008260 42.920 678 362 10 29 690 5 673 0.0 543
MsG0180000732.01.T01 MTR_0229s0040 97.333 225 6 0 467 691 16 240 2.77e-160 461
MsG0180000732.01.T01 MTR_2g041650 37.387 666 325 12 29 675 5 597 6.66e-138 418
MsG0180000732.01.T01 MTR_1g017910 28.681 652 422 13 25 634 14 664 6.31e-71 244
MsG0180000732.01.T01 MTR_1g090620 27.174 644 364 14 65 653 42 635 9.52e-67 232
MsG0180000732.01.T01 MTR_1g057560 25.990 631 387 11 65 660 41 626 5.83e-58 207
MsG0180000732.01.T01 MTR_8g021330 25.764 458 319 7 231 671 164 617 1.13e-38 152
MsG0180000732.01.T01 MTR_4g103540 28.698 453 279 15 232 662 253 683 1.66e-37 149
MsG0180000732.01.T01 MTR_5g073450 27.212 452 312 7 226 668 199 642 1.71e-37 149
MsG0180000732.01.T01 MTR_3g031130 27.130 446 306 5 231 668 194 628 1.76e-34 139
MsG0180000732.01.T01 MTR_7g026630 23.111 450 315 8 232 661 214 652 2.63e-32 133
MsG0180000732.01.T01 MTR_6g033310 24.219 512 340 13 194 667 231 732 2.19e-29 124
MsG0180000732.01.T01 MTR_7g013770 24.335 526 324 13 189 657 156 664 3.18e-29 124
MsG0180000732.01.T01 MTR_3g025900 24.609 447 305 9 234 669 187 612 7.16e-28 119
MsG0180000732.01.T01 MTR_4g062330 24.041 391 272 5 254 626 196 579 5.06e-26 114
MsG0180000732.01.T01 MTR_1g067460 22.835 508 342 11 189 657 103 599 4.06e-25 110
MsG0180000732.01.T01 MTR_1g117090 22.961 466 305 14 233 653 206 662 7.05e-25 110
MsG0180000732.01.T01 MTR_5g073460 22.951 488 340 11 185 649 208 682 4.65e-24 108
MsG0180000732.01.T01 MTR_2g096230 22.601 469 313 10 189 624 101 552 1.51e-22 102
MsG0180000732.01.T01 MTR_1g067480 22.105 475 316 11 189 622 105 566 1.16e-20 97.1
MsG0180000732.01.T01 MTR_5g074130 21.901 484 348 11 193 660 207 676 7.34e-20 94.7
MsG0180000732.01.T01 MTR_5g073620 25.180 278 174 8 280 544 339 595 1.52e-15 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000732.01.T01 AT4G31540 74.118 680 162 3 25 691 9 687 0.0 1030
MsG0180000732.01.T01 AT1G51640 40.429 653 340 12 27 660 6 628 3.91e-158 472
MsG0180000732.01.T01 AT5G03540 27.204 658 444 13 25 671 4 637 1.45e-65 228
MsG0180000732.01.T01 AT5G03540 25.731 684 447 12 25 671 4 663 1.78e-61 218
MsG0180000732.01.T01 AT5G03540 28.709 519 322 10 188 671 17 522 3.76e-55 197
MsG0180000732.01.T01 AT5G52340 24.812 665 407 13 28 653 7 617 6.03e-55 199
MsG0180000732.01.T01 AT5G52350 26.350 463 296 13 217 660 142 578 1.39e-41 160
MsG0180000732.01.T01 AT1G72470 26.742 445 302 9 231 657 181 619 4.12e-39 154
MsG0180000732.01.T01 AT5G13990 25.942 451 314 10 215 657 241 679 4.73e-38 151
MsG0180000732.01.T01 AT5G50380 23.518 523 335 10 191 657 156 669 1.91e-35 143
MsG0180000732.01.T01 AT3G14090 24.138 435 313 7 236 657 181 611 1.49e-33 137
MsG0180000732.01.T01 AT1G54090 24.503 453 314 8 236 672 178 618 8.52e-33 134
MsG0180000732.01.T01 AT5G58430 25.234 428 311 4 231 658 199 617 8.51e-32 131
MsG0180000732.01.T01 AT5G13150 24.295 461 301 11 229 662 208 647 2.27e-31 130
MsG0180000732.01.T01 AT2G39380 24.645 422 294 7 254 661 201 612 3.89e-29 123
MsG0180000732.01.T01 AT1G07000 23.776 429 312 5 231 658 181 595 1.88e-27 118
MsG0180000732.01.T01 AT3G55150 25.676 444 299 10 235 661 183 612 3.58e-25 111
MsG0180000732.01.T01 AT3G29400 21.480 554 362 10 168 657 101 645 6.84e-25 110
MsG0180000732.01.T01 AT2G28640 21.290 465 331 6 189 628 99 553 3.23e-22 102
MsG0180000732.01.T01 AT3G09520 22.957 514 340 15 190 660 107 607 9.16e-22 100
MsG0180000732.01.T01 AT5G61010 23.097 381 258 10 298 663 274 634 1.20e-20 97.1
MsG0180000732.01.T01 AT5G61010 23.097 381 258 10 298 663 274 634 1.20e-20 97.1
MsG0180000732.01.T01 AT1G07725 20.833 384 281 5 255 628 196 566 1.32e-19 93.6
MsG0180000732.01.T01 AT2G28650 20.533 375 284 3 254 626 167 529 1.20e-18 90.5
MsG0180000732.01.T01 AT3G09530 20.755 477 326 12 189 624 101 566 2.22e-13 73.9

Find 166 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGTTCCCTTGTCAAATTT+TGG 0.197858 1:+10377017 None:intergenic
GAAAGCCGTTGAGTTAAATT+TGG 0.213271 1:-10376744 MsG0180000732.01.T01:CDS
TCTGGTTCTGGTTCTGGTTC+TGG 0.213548 1:-10378162 MsG0180000732.01.T01:CDS
GGTTGTTCTGGTTCTGGTTC+TGG 0.213548 1:-10378174 MsG0180000732.01.T01:CDS
CAACAACTTCAAAAGCTTAA+TGG 0.220044 1:+10377114 None:intergenic
TCTGGTTCTGGTTCTGGTTC+TGG 0.229561 1:-10378168 MsG0180000732.01.T01:CDS
TTGGAAACGTCAAAGCTTTC+AGG 0.249970 1:-10376801 MsG0180000732.01.T01:CDS
TTCATGCTGCCGTGTCTTGC+AGG 0.253370 1:+10376212 None:intergenic
TTCATGGCTGATTCTAGTTC+TGG 0.254971 1:-10378195 MsG0180000732.01.T01:CDS
AGTTCTGGTTGTTCTGGTTC+TGG 0.259263 1:-10378180 MsG0180000732.01.T01:CDS
GATTCTAGTTCTGGTTGTTC+TGG 0.282340 1:-10378186 MsG0180000732.01.T01:CDS
CACAAATTGCAGGCTATTCT+TGG 0.286540 1:-10377484 MsG0180000732.01.T01:CDS
CCATCTGGAGGAGGAGGGTT+TGG 0.290070 1:+10376926 None:intergenic
CGGTTGGAGGTCATATTAAT+AGG 0.293348 1:-10377939 MsG0180000732.01.T01:CDS
CGGAGTTACATGCAGAATTA+TGG 0.312582 1:-10376329 MsG0180000732.01.T01:CDS
TTCTGTTGTTCACAAATTGC+AGG 0.312694 1:-10377494 MsG0180000732.01.T01:CDS
GAGTTTGCAGGCGCTGAATT+TGG 0.335155 1:-10377386 MsG0180000732.01.T01:CDS
GTCGGATTCTCTTGGTGATC+AGG 0.342040 1:-10377545 MsG0180000732.01.T01:CDS
TAATGTGAGGGCGAGTTTGC+AGG 0.342343 1:-10377398 MsG0180000732.01.T01:CDS
AACAACTTCAAAAGCTTAAT+GGG 0.354587 1:+10377115 None:intergenic
AGATAATTCGGTTGCGGATC+AGG 0.357241 1:-10377719 MsG0180000732.01.T01:CDS
GAAGGAGTTAGAGAGTCTTA+AGG 0.357947 1:-10377677 MsG0180000732.01.T01:CDS
AGGCTGTGGTGCCTGTTTAC+CGG 0.359605 1:-10376349 MsG0180000732.01.T01:CDS
AGCTCAGTGGGGAAAGCATT+TGG 0.365875 1:-10377305 MsG0180000732.01.T01:CDS
GTGATAAAGCTCACCAATCT+TGG 0.366743 1:+10376896 None:intergenic
GGGATCGCAGAATGATGATT+TGG 0.371178 1:-10377656 MsG0180000732.01.T01:CDS
TGAGTATTTAGAAGATAATT+CGG 0.373697 1:-10377731 MsG0180000732.01.T01:CDS
CCGCAGCTTAGTGGAAAGTA+TGG 0.373854 1:-10376185 MsG0180000732.01.T01:CDS
GCGTGCCACTGCTCGTGATC+TGG 0.374871 1:-10376486 MsG0180000732.01.T01:CDS
AATCCGCGGTGAGACCGATT+CGG 0.378173 1:-10377984 MsG0180000732.01.T01:CDS
CAATATTCTTGCGTGATAGC+TGG 0.381138 1:-10376562 MsG0180000732.01.T01:CDS
ATTTGAAAGGGACAAAGCTT+GGG 0.383699 1:-10376643 MsG0180000732.01.T01:CDS
ATACTTGCATTTCTTCAATT+CGG 0.397863 1:-10377166 MsG0180000732.01.T01:CDS
TCCTGCGGCTGCCGTGTTGA+AGG 0.399608 1:-10377908 MsG0180000732.01.T01:CDS
TCCAAGGTTAGATGAGATTA+GGG 0.401272 1:-10378025 MsG0180000732.01.T01:CDS
TGCATGTAACTCCGGTAAAC+AGG 0.407641 1:+10376338 None:intergenic
TGGCTTGTTAGATGCTGCTT+TGG 0.407742 1:-10377629 MsG0180000732.01.T01:CDS
ATAAATTAGAGAATGAGTTT+AGG 0.409738 1:-10377606 MsG0180000732.01.T01:CDS
CTTAGTGGAAAGTATGGAAA+TGG 0.411047 1:-10376179 MsG0180000732.01.T01:CDS
CATTTGAAAGGGACAAAGCT+TGG 0.412828 1:-10376644 MsG0180000732.01.T01:CDS
ATCCGCGGTGAGACCGATTC+GGG 0.416911 1:-10377983 MsG0180000732.01.T01:CDS
GATTACTGCAATAAACTCTT+GGG 0.421657 1:-10376872 MsG0180000732.01.T01:CDS
TGATTACTGCAATAAACTCT+TGG 0.423599 1:-10376873 MsG0180000732.01.T01:CDS
TTTCTGGGAACTTCTGGTTC+AGG 0.424206 1:-10376963 MsG0180000732.01.T01:CDS
GTAGGTTGAGAGCTAATGAT+AGG 0.424362 1:-10377462 MsG0180000732.01.T01:CDS
GTCCAAGGTTAGATGAGATT+AGG 0.427126 1:-10378026 MsG0180000732.01.T01:CDS
TCCTGATCATTCACCGAAGT+TGG 0.433828 1:-10376820 MsG0180000732.01.T01:CDS
AAGGAGTTAGAGAGTCTTAA+GGG 0.434468 1:-10377676 MsG0180000732.01.T01:CDS
GGATCCGCGGATTGATCTGC+CGG 0.438356 1:-10377845 MsG0180000732.01.T01:CDS
TCCAACTTCGGTGAATGATC+AGG 0.439211 1:+10376819 None:intergenic
TGATCTGCCGGGTTATTTGT+CGG 0.443522 1:-10377833 MsG0180000732.01.T01:CDS
CATGATCCAACCTGACTGCT+TGG 0.451378 1:+10376415 None:intergenic
CCTATGTTGTCGGATTCTCT+TGG 0.451569 1:-10377553 MsG0180000732.01.T01:CDS
CATGCAGAATTATGGTCCCT+TGG 0.459971 1:-10376321 MsG0180000732.01.T01:CDS
AATATTCTTGCGTGATAGCT+GGG 0.460433 1:-10376561 MsG0180000732.01.T01:CDS
GGGAAAGCATTTGGAGTTTG+CGG 0.460517 1:-10377296 MsG0180000732.01.T01:CDS
CGTGTCTTGCAGGCTTCGGC+CGG 0.460699 1:+10376222 None:intergenic
ATGAAAAGTCCGCAGCTTAG+TGG 0.461120 1:-10376194 MsG0180000732.01.T01:CDS
CTGCCGTGTCTTGCAGGCTT+CGG 0.462821 1:+10376218 None:intergenic
AATTTGTGAACAACAGAAAC+AGG 0.464830 1:+10377499 None:intergenic
TTCGGTGAATGATCAGGACT+TGG 0.465421 1:+10376825 None:intergenic
ATCTGTTCAAACATTTGAAA+GGG 0.466483 1:-10376655 MsG0180000732.01.T01:CDS
TGTGCCGCTTCCTATGTTGT+CGG 0.468282 1:-10377563 MsG0180000732.01.T01:CDS
TTATCTTAAGAATTTGAAGA+AGG 0.471284 1:-10377695 MsG0180000732.01.T01:CDS
AGCTTTGACGTTTCCAACTT+CGG 0.476109 1:+10376807 None:intergenic
CTTATCAAGAGTGTGATTGA+TGG 0.476562 1:-10376998 MsG0180000732.01.T01:CDS
GAGACCGATTCGGGCTGAAA+AGG 0.477257 1:-10377974 MsG0180000732.01.T01:CDS
TGGGTTGGCTATTCAGTGGT+TGG 0.477912 1:-10377764 MsG0180000732.01.T01:CDS
TTTGGGAGATAATTGTGGGT+TGG 0.482896 1:-10377779 MsG0180000732.01.T01:CDS
GATGCTCTTGTGGCGGTTGG+AGG 0.483070 1:-10377952 MsG0180000732.01.T01:CDS
ACACTTCCATCTGGAGGAGG+AGG 0.483237 1:+10376920 None:intergenic
TGATAAAGCTCACCAATCTT+GGG 0.483724 1:+10376897 None:intergenic
AAATTTGGAGACGTGGATCA+AGG 0.484048 1:-10376729 MsG0180000732.01.T01:CDS
AACGATGTGTTTGAGAGGCT+TGG 0.484729 1:-10377238 MsG0180000732.01.T01:CDS
TTAGACAAATCAAAGAGTGT+TGG 0.488342 1:-10378069 MsG0180000732.01.T01:CDS
ACGAGCAGTGGCACGCCCTC+CGG 0.492685 1:+10376493 None:intergenic
GGTTGGAGGTCATATTAATA+GGG 0.494289 1:-10377938 MsG0180000732.01.T01:CDS
AATCTTGGGACACTTCCATC+TGG 0.494650 1:+10376911 None:intergenic
AGATGGAAGTGTCCCAAGAT+TGG 0.494853 1:-10376909 MsG0180000732.01.T01:CDS
CCTTCCCTACTCAAATGTCC+AGG 0.495820 1:+10376530 None:intergenic
GAAGCCGTACGACGAAGATC+AGG 0.495920 1:+10376152 None:intergenic
GCTTGGACGCGATGTGTGGA+TGG 0.496987 1:-10377221 MsG0180000732.01.T01:CDS
GGCTGAAAAGGATGCTCTTG+TGG 0.506001 1:-10377962 MsG0180000732.01.T01:CDS
GACGTGCCAGCTTATAGTGC+AGG 0.506334 1:-10376369 MsG0180000732.01.T01:CDS
TTTAGAAGATAATTCGGTTG+CGG 0.506379 1:-10377725 MsG0180000732.01.T01:CDS
ATCAGGACTTGGGTCAGTAT+AGG 0.506827 1:+10376836 None:intergenic
ACCTTCAACACGGCAGCCGC+AGG 0.507042 1:+10377907 None:intergenic
TTATCAAGAGTGTGATTGAT+GGG 0.507996 1:-10376997 MsG0180000732.01.T01:CDS
CATCTGTTCAAACATTTGAA+AGG 0.508888 1:-10376656 MsG0180000732.01.T01:CDS
CAAGCAGTCAGGTTGGATCA+TGG 0.510449 1:-10376414 MsG0180000732.01.T01:CDS
CGGCCGAAGCCTGCAAGACA+CGG 0.517639 1:-10376221 MsG0180000732.01.T01:CDS
CTTCTCAAAGATAGCTGCAC+AGG 0.518225 1:-10377194 MsG0180000732.01.T01:CDS
AATTGCAGGCTATTCTTGGT+AGG 0.520166 1:-10377480 MsG0180000732.01.T01:CDS
AGATTAGGGTAAGGTTACCT+TGG 0.521778 1:-10378011 MsG0180000732.01.T01:CDS
ACTTGAGAAGTCGTTATTGT+CGG 0.521936 1:-10377866 MsG0180000732.01.T01:CDS
AGAGGTGTATATAGCTCAGT+GGG 0.523576 1:-10377317 MsG0180000732.01.T01:CDS
GTCGTTGAACAAATTGAGAC+TGG 0.527952 1:-10377080 MsG0180000732.01.T01:CDS
CATTAGAGAAAGCAGGTCCA+AGG 0.532317 1:-10378041 MsG0180000732.01.T01:CDS
AGTTAGAAGTTCTAATGTGA+GGG 0.543262 1:-10377410 MsG0180000732.01.T01:CDS
ACCCTAATCTCATCTAACCT+TGG 0.545770 1:+10378024 None:intergenic
CCAAACCCTCCTCCTCCAGA+TGG 0.549025 1:-10376926 MsG0180000732.01.T01:CDS
GGATTAGCATTAGAGAAAGC+AGG 0.551169 1:-10378048 MsG0180000732.01.T01:CDS
CCTGGACATTTGAGTAGGGA+AGG 0.552459 1:-10376530 MsG0180000732.01.T01:CDS
AAGGATGCTCTTGTGGCGGT+TGG 0.555491 1:-10377955 MsG0180000732.01.T01:CDS
TGCGGTGAAACATTTGTTTG+AGG 0.561096 1:-10377278 MsG0180000732.01.T01:CDS
CCAAGAGAATCCGACAACAT+AGG 0.563345 1:+10377553 None:intergenic
AAAATACACAGTACAGAAGC+TGG 0.564405 1:-10376267 MsG0180000732.01.T01:CDS
CCAGCTTATAGTGCAGGCTG+TGG 0.565578 1:-10376363 MsG0180000732.01.T01:CDS
TCAAAGATAGCTGCACAGGC+AGG 0.565631 1:-10377190 MsG0180000732.01.T01:CDS
CCACAGCCTGCACTATAAGC+TGG 0.566269 1:+10376363 None:intergenic
CACTTCCATCTGGAGGAGGA+GGG 0.569285 1:+10376921 None:intergenic
TTGAGTTAAATTTGGAGACG+TGG 0.573276 1:-10376736 MsG0180000732.01.T01:CDS
GTTACCTTGGCTTGAATCCG+CGG 0.573888 1:-10377998 MsG0180000732.01.T01:CDS
CATAATTCTGCATGTAACTC+CGG 0.573972 1:+10376330 None:intergenic
GGGACACTTCCATCTGGAGG+AGG 0.575814 1:+10376917 None:intergenic
CTTGACCAGATCACGAGCAG+TGG 0.576203 1:+10376481 None:intergenic
GGTCATATTAATAGGGCTGT+AGG 0.581630 1:-10377931 MsG0180000732.01.T01:CDS
TTCAAAACCGACAAATAACC+CGG 0.582627 1:+10377826 None:intergenic
AGTCGTTATTGTCGGATCCG+CGG 0.586429 1:-10377858 MsG0180000732.01.T01:CDS
ACAGAAACAGGCAAAGGCGA+AGG 0.589490 1:+10377511 None:intergenic
CTTGGACGCGATGTGTGGAT+GGG 0.589692 1:-10377220 MsG0180000732.01.T01:CDS
AGAGGCTTGGACGCGATGTG+TGG 0.590231 1:-10377225 MsG0180000732.01.T01:CDS
CGTCTCCAAATTTAACTCAA+CGG 0.593396 1:+10376739 None:intergenic
CTGGACATTTGAGTAGGGAA+GGG 0.593864 1:-10376529 MsG0180000732.01.T01:CDS
CAGAATGATGATTTGGATGG+TGG 0.595911 1:-10377649 MsG0180000732.01.T01:CDS
GGTTAGATGAGATTAGGGTA+AGG 0.596647 1:-10378020 MsG0180000732.01.T01:CDS
AAGTTAGAAGTTCTAATGTG+AGG 0.596874 1:-10377411 MsG0180000732.01.T01:CDS
AATGCCTGATCTTCGTCGTA+CGG 0.597627 1:-10376156 MsG0180000732.01.T01:CDS
AGCTCCCTGGACATTTGAGT+AGG 0.600256 1:-10376535 MsG0180000732.01.T01:CDS
GCTATCACGCAAGAATATTG+TGG 0.603714 1:+10376565 None:intergenic
ATTACTGCAATAAACTCTTG+GGG 0.604612 1:-10376871 MsG0180000732.01.T01:CDS
AACGTCAAAGCTTTCAGGAG+AGG 0.605877 1:-10376796 MsG0180000732.01.T01:CDS
CAATGATGTGCAGAGCATAG+AGG 0.606926 1:-10377335 MsG0180000732.01.T01:CDS
TTTGAAAGGGACAAAGCTTG+GGG 0.608168 1:-10376642 MsG0180000732.01.T01:CDS
GAATCCGACAACATAGGAAG+CGG 0.608996 1:+10377559 None:intergenic
GCTCCCTGGACATTTGAGTA+GGG 0.611223 1:-10376534 MsG0180000732.01.T01:CDS
ATATTCTTGCGTGATAGCTG+GGG 0.614582 1:-10376560 MsG0180000732.01.T01:CDS
TTTGTAACGATGTGTTTGAG+AGG 0.617458 1:-10377243 MsG0180000732.01.T01:CDS
CTCACCGCGGATTCAAGCCA+AGG 0.618792 1:+10377994 None:intergenic
CTGTTATCTTGCTCAACCAA+GGG 0.621434 1:+10376305 None:intergenic
TCGGTGAATGATCAGGACTT+GGG 0.623778 1:+10376826 None:intergenic
ATTGTGGGTTGGCTATTCAG+TGG 0.627113 1:-10377768 MsG0180000732.01.T01:CDS
CTTCCCTACTCAAATGTCCA+GGG 0.629256 1:+10376531 None:intergenic
GCTGTTATCTTGCTCAACCA+AGG 0.631207 1:+10376304 None:intergenic
ACTCGGACACTGAGATCTCA+AGG 0.640126 1:+10377359 None:intergenic
TCGAAATCCAAAATTTGACA+AGG 0.642706 1:-10377024 MsG0180000732.01.T01:CDS
TTACTGCAATAAACTCTTGG+GGG 0.643419 1:-10376870 MsG0180000732.01.T01:CDS
GCTCTGCACATCATTGAACT+CGG 0.647356 1:+10377342 None:intergenic
CCATACTTTCCACTAAGCTG+CGG 0.647586 1:+10376185 None:intergenic
TAATAGGGCTGTAGGTCCTG+CGG 0.650018 1:-10377923 MsG0180000732.01.T01:CDS
CTTGGGACACTTCCATCTGG+AGG 0.650514 1:+10376914 None:intergenic
TGGTTCAGGTAGAGTTACAG+AGG 0.653712 1:-10376949 MsG0180000732.01.T01:CDS
GATCCGCGGATTGATCTGCC+GGG 0.653844 1:-10377844 MsG0180000732.01.T01:CDS
TGAAAAGGATGCTCTTGTGG+CGG 0.658059 1:-10377959 MsG0180000732.01.T01:CDS
CGCATCGAAAACCTTCAACA+CGG 0.663692 1:+10377897 None:intergenic
TCGCAGAATGATGATTTGGA+TGG 0.673874 1:-10377652 MsG0180000732.01.T01:CDS
TATTCTTGCGTGATAGCTGG+GGG 0.674348 1:-10376559 MsG0180000732.01.T01:CDS
AGCGTCTTGAGGAGGCGTTG+AGG 0.675104 1:-10377804 MsG0180000732.01.T01:CDS
CGAAATCCAAAATTTGACAA+GGG 0.676549 1:-10377023 MsG0180000732.01.T01:CDS
TGAACAACAGAAACAGGCAA+AGG 0.682214 1:+10377505 None:intergenic
TATCAAGAGTGTGATTGATG+GGG 0.684854 1:-10376996 MsG0180000732.01.T01:CDS
TAGAGGTGTATATAGCTCAG+TGG 0.691578 1:-10377318 MsG0180000732.01.T01:CDS
AGCCCGAATCGGTCTCACCG+CGG 0.697487 1:+10377981 None:intergenic
TGTTCAAAATCTCATTAACG+AGG 0.709151 1:+10376771 None:intergenic
TAACCCGGCAGATCAATCCG+CGG 0.748213 1:+10377841 None:intergenic
GAGGTGTATATAGCTCAGTG+GGG 0.791248 1:-10377316 MsG0180000732.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAGAGAATGAGTTT+AGG - Chr1:10376725-10376744 MsG0180000732.01.T01:CDS 20.0%
!! TGAGTATTTAGAAGATAATT+CGG - Chr1:10376600-10376619 MsG0180000732.01.T01:CDS 20.0%
!! TTATCTTAAGAATTTGAAGA+AGG - Chr1:10376636-10376655 MsG0180000732.01.T01:CDS 20.0%
!!! TGTGTATTTTGCATATTTAT+TGG + Chr1:10378054-10378073 None:intergenic 20.0%
! AACAACTTCAAAAGCTTAAT+GGG + Chr1:10377219-10377238 None:intergenic 25.0%
! AAGATTGAAAAAATTCAACG+AGG - Chr1:10377875-10377894 MsG0180000732.01.T01:CDS 25.0%
! ATACTTGCATTTCTTCAATT+CGG - Chr1:10377165-10377184 MsG0180000732.01.T01:CDS 25.0%
! ATCTGTTCAAACATTTGAAA+GGG - Chr1:10377676-10377695 MsG0180000732.01.T01:CDS 25.0%
! ATTGTTCATTGCAAAAAAGT+TGG + Chr1:10377649-10377668 None:intergenic 25.0%
AATTTGTGAACAACAGAAAC+AGG + Chr1:10376835-10376854 None:intergenic 30.0%
ATTACTGCAATAAACTCTTG+GGG - Chr1:10377460-10377479 MsG0180000732.01.T01:CDS 30.0%
CAACAACTTCAAAAGCTTAA+TGG + Chr1:10377220-10377239 None:intergenic 30.0%
CATCTGTTCAAACATTTGAA+AGG - Chr1:10377675-10377694 MsG0180000732.01.T01:CDS 30.0%
CGAAATCCAAAATTTGACAA+GGG - Chr1:10377308-10377327 MsG0180000732.01.T01:CDS 30.0%
GATTACTGCAATAAACTCTT+GGG - Chr1:10377459-10377478 MsG0180000732.01.T01:CDS 30.0%
TCGAAATCCAAAATTTGACA+AGG - Chr1:10377307-10377326 MsG0180000732.01.T01:CDS 30.0%
TGATTACTGCAATAAACTCT+TGG - Chr1:10377458-10377477 MsG0180000732.01.T01:CDS 30.0%
TGTTCAAAATCTCATTAACG+AGG + Chr1:10377563-10377582 None:intergenic 30.0%
TTTAGAAGATAATTCGGTTG+CGG - Chr1:10376606-10376625 MsG0180000732.01.T01:CDS 30.0%
! AAATGCTTTTGTGTCTTTAC+CGG - Chr1:10378090-10378109 MsG0180000732.01.T01:CDS 30.0%
! AAGTTAGAAGTTCTAATGTG+AGG - Chr1:10376920-10376939 MsG0180000732.01.T01:CDS 30.0%
! AGTTAGAAGTTCTAATGTGA+GGG - Chr1:10376921-10376940 MsG0180000732.01.T01:CDS 30.0%
! TAAGTTCCCTTGTCAAATTT+TGG + Chr1:10377317-10377336 None:intergenic 30.0%
! TTAGACAAATCAAAGAGTGT+TGG - Chr1:10376262-10376281 MsG0180000732.01.T01:CDS 30.0%
! TTATCAAGAGTGTGATTGAT+GGG - Chr1:10377334-10377353 MsG0180000732.01.T01:CDS 30.0%
! TTTTTGCAATGAACAATCAC+TGG - Chr1:10377652-10377671 MsG0180000732.01.T01:CDS 30.0%
!!! CATTAAGCTTTTGAAGTTGT+TGG - Chr1:10377218-10377237 MsG0180000732.01.T01:CDS 30.0%
!!! TGAGTTTAGGTTGCTTTTAA+CGG - Chr1:10376738-10376757 MsG0180000732.01.T01:CDS 30.0%
AAAATACACAGTACAGAAGC+TGG - Chr1:10378064-10378083 MsG0180000732.01.T01:CDS 35.0%
AAGGAGTTAGAGAGTCTTAA+GGG - Chr1:10376655-10376674 MsG0180000732.01.T01:CDS 35.0%
AATATTCTTGCGTGATAGCT+GGG - Chr1:10377770-10377789 MsG0180000732.01.T01:CDS 35.0%
ACTTGAGAAGTCGTTATTGT+CGG - Chr1:10376465-10376484 MsG0180000732.01.T01:CDS 35.0%
ATTTGAAAGGGACAAAGCTT+GGG - Chr1:10377688-10377707 MsG0180000732.01.T01:CDS 35.0%
CATAATTCTGCATGTAACTC+CGG + Chr1:10378004-10378023 None:intergenic 35.0%
CGTCTCCAAATTTAACTCAA+CGG + Chr1:10377595-10377614 None:intergenic 35.0%
GAAAGCCGTTGAGTTAAATT+TGG - Chr1:10377587-10377606 MsG0180000732.01.T01:CDS 35.0%
GCAAAAAAGTTGGACAACAT+AGG + Chr1:10377639-10377658 None:intergenic 35.0%
GGTTGGAGGTCATATTAATA+GGG - Chr1:10376393-10376412 MsG0180000732.01.T01:CDS 35.0%
TCCAAGGTTAGATGAGATTA+GGG - Chr1:10376306-10376325 MsG0180000732.01.T01:CDS 35.0%
TGATAAAGCTCACCAATCTT+GGG + Chr1:10377437-10377456 None:intergenic 35.0%
TTACTGCAATAAACTCTTGG+GGG - Chr1:10377461-10377480 MsG0180000732.01.T01:CDS 35.0%
TTCAAAACCGACAAATAACC+CGG + Chr1:10376508-10376527 None:intergenic 35.0%
TTCTGTTGTTCACAAATTGC+AGG - Chr1:10376837-10376856 MsG0180000732.01.T01:CDS 35.0%
TTGAGTTAAATTTGGAGACG+TGG - Chr1:10377595-10377614 MsG0180000732.01.T01:CDS 35.0%
TTTGTAACGATGTGTTTGAG+AGG - Chr1:10377088-10377107 MsG0180000732.01.T01:CDS 35.0%
! CTTAGTGGAAAGTATGGAAA+TGG - Chr1:10378152-10378171 MsG0180000732.01.T01:CDS 35.0%
! CTTATCAAGAGTGTGATTGA+TGG - Chr1:10377333-10377352 MsG0180000732.01.T01:CDS 35.0%
! TATCAAGAGTGTGATTGATG+GGG - Chr1:10377335-10377354 MsG0180000732.01.T01:CDS 35.0%
!! AGAAATTTTCTGGGAACTTC+TGG - Chr1:10377362-10377381 MsG0180000732.01.T01:CDS 35.0%
!! AGGTTTTTGGGAGATAATTG+TGG - Chr1:10376547-10376566 MsG0180000732.01.T01:CDS 35.0%
!! GGTTTTTGGGAGATAATTGT+GGG - Chr1:10376548-10376567 MsG0180000732.01.T01:CDS 35.0%
AAATTTGGAGACGTGGATCA+AGG - Chr1:10377602-10377621 MsG0180000732.01.T01:CDS 40.0%
AATTGCAGGCTATTCTTGGT+AGG - Chr1:10376851-10376870 MsG0180000732.01.T01:CDS 40.0%
ACCCTAATCTCATCTAACCT+TGG + Chr1:10376310-10376329 None:intergenic 40.0%
AGATTAGGGTAAGGTTACCT+TGG - Chr1:10376320-10376339 MsG0180000732.01.T01:CDS 40.0%
ATATTCTTGCGTGATAGCTG+GGG - Chr1:10377771-10377790 MsG0180000732.01.T01:CDS 40.0%
CAATATTCTTGCGTGATAGC+TGG - Chr1:10377769-10377788 MsG0180000732.01.T01:CDS 40.0%
CACAAATTGCAGGCTATTCT+TGG - Chr1:10376847-10376866 MsG0180000732.01.T01:CDS 40.0%
CATTTGAAAGGGACAAAGCT+TGG - Chr1:10377687-10377706 MsG0180000732.01.T01:CDS 40.0%
CGGAGTTACATGCAGAATTA+TGG - Chr1:10378002-10378021 MsG0180000732.01.T01:CDS 40.0%
CGGTTGGAGGTCATATTAAT+AGG - Chr1:10376392-10376411 MsG0180000732.01.T01:CDS 40.0%
CTGTTATCTTGCTCAACCAA+GGG + Chr1:10378029-10378048 None:intergenic 40.0%
GAAGGAGTTAGAGAGTCTTA+AGG - Chr1:10376654-10376673 MsG0180000732.01.T01:CDS 40.0%
GCTATCACGCAAGAATATTG+TGG + Chr1:10377769-10377788 None:intergenic 40.0%
GGTCATATTAATAGGGCTGT+AGG - Chr1:10376400-10376419 MsG0180000732.01.T01:CDS 40.0%
GGTTAGATGAGATTAGGGTA+AGG - Chr1:10376311-10376330 MsG0180000732.01.T01:CDS 40.0%
GTCCAAGGTTAGATGAGATT+AGG - Chr1:10376305-10376324 MsG0180000732.01.T01:CDS 40.0%
GTCGTTGAACAAATTGAGAC+TGG - Chr1:10377251-10377270 MsG0180000732.01.T01:CDS 40.0%
GTGATAAAGCTCACCAATCT+TGG + Chr1:10377438-10377457 None:intergenic 40.0%
TGAACAACAGAAACAGGCAA+AGG + Chr1:10376829-10376848 None:intergenic 40.0%
TGCGGTGAAACATTTGTTTG+AGG - Chr1:10377053-10377072 MsG0180000732.01.T01:CDS 40.0%
TTGGAAACGTCAAAGCTTTC+AGG - Chr1:10377530-10377549 MsG0180000732.01.T01:CDS 40.0%
TTTGAAAGGGACAAAGCTTG+GGG - Chr1:10377689-10377708 MsG0180000732.01.T01:CDS 40.0%
TTTGGGAGATAATTGTGGGT+TGG - Chr1:10376552-10376571 MsG0180000732.01.T01:CDS 40.0%
! AAAGCTTGGGGATCTTTTAG+GGG - Chr1:10377701-10377720 MsG0180000732.01.T01:CDS 40.0%
! ACAAAGCTTGGGGATCTTTT+AGG - Chr1:10377699-10377718 MsG0180000732.01.T01:CDS 40.0%
! AGAGGTGTATATAGCTCAGT+GGG - Chr1:10377014-10377033 MsG0180000732.01.T01:CDS 40.0%
! AGCTTTGACGTTTCCAACTT+CGG + Chr1:10377527-10377546 None:intergenic 40.0%
! CAAAGCTTGGGGATCTTTTA+GGG - Chr1:10377700-10377719 MsG0180000732.01.T01:CDS 40.0%
! CAGAATGATGATTTGGATGG+TGG - Chr1:10376682-10376701 MsG0180000732.01.T01:CDS 40.0%
! CTGGATTTCAACCGTCTTTT+CGG - Chr1:10377270-10377289 MsG0180000732.01.T01:CDS 40.0%
! GGATTAGCATTAGAGAAAGC+AGG - Chr1:10376283-10376302 MsG0180000732.01.T01:CDS 40.0%
! GTAGGTTGAGAGCTAATGAT+AGG - Chr1:10376869-10376888 MsG0180000732.01.T01:CDS 40.0%
! TAGAGGTGTATATAGCTCAG+TGG - Chr1:10377013-10377032 MsG0180000732.01.T01:CDS 40.0%
! TCGCAGAATGATGATTTGGA+TGG - Chr1:10376679-10376698 MsG0180000732.01.T01:CDS 40.0%
! TGGATTTCAACCGTCTTTTC+GGG - Chr1:10377271-10377290 MsG0180000732.01.T01:CDS 40.0%
!! GATTCTAGTTCTGGTTGTTC+TGG - Chr1:10376145-10376164 MsG0180000732.01.T01:CDS 40.0%
AACGATGTGTTTGAGAGGCT+TGG - Chr1:10377093-10377112 MsG0180000732.01.T01:CDS 45.0%
AACGTCAAAGCTTTCAGGAG+AGG - Chr1:10377535-10377554 MsG0180000732.01.T01:CDS 45.0%
AATCTTGGGACACTTCCATC+TGG + Chr1:10377423-10377442 None:intergenic 45.0%
AATGCCTGATCTTCGTCGTA+CGG - Chr1:10378175-10378194 MsG0180000732.01.T01:CDS 45.0%
AGATAATTCGGTTGCGGATC+AGG - Chr1:10376612-10376631 MsG0180000732.01.T01:CDS 45.0%
ATCAGGACTTGGGTCAGTAT+AGG + Chr1:10377498-10377517 None:intergenic 45.0%
ATGAAAAGTCCGCAGCTTAG+TGG - Chr1:10378137-10378156 MsG0180000732.01.T01:CDS 45.0%
CAATGATGTGCAGAGCATAG+AGG - Chr1:10376996-10377015 MsG0180000732.01.T01:CDS 45.0%
CATGCAGAATTATGGTCCCT+TGG - Chr1:10378010-10378029 MsG0180000732.01.T01:CDS 45.0%
CATTAGAGAAAGCAGGTCCA+AGG - Chr1:10376290-10376309 MsG0180000732.01.T01:CDS 45.0%
CCAAGAGAATCCGACAACAT+AGG + Chr1:10376781-10376800 None:intergenic 45.0%
CCATACTTTCCACTAAGCTG+CGG + Chr1:10378149-10378168 None:intergenic 45.0%
CCTATGTTGTCGGATTCTCT+TGG - Chr1:10376778-10376797 MsG0180000732.01.T01:CDS 45.0%
CGCATCGAAAACCTTCAACA+CGG + Chr1:10376437-10376456 None:intergenic 45.0%
CTGGACATTTGAGTAGGGAA+GGG - Chr1:10377802-10377821 MsG0180000732.01.T01:CDS 45.0%
CTTCCCTACTCAAATGTCCA+GGG + Chr1:10377803-10377822 None:intergenic 45.0%
CTTCTCAAAGATAGCTGCAC+AGG - Chr1:10377137-10377156 MsG0180000732.01.T01:CDS 45.0%
GAATCCGACAACATAGGAAG+CGG + Chr1:10376775-10376794 None:intergenic 45.0%
GAGGTGTATATAGCTCAGTG+GGG - Chr1:10377015-10377034 MsG0180000732.01.T01:CDS 45.0%
GCTCTGCACATCATTGAACT+CGG + Chr1:10376992-10377011 None:intergenic 45.0%
GCTGTTATCTTGCTCAACCA+AGG + Chr1:10378030-10378049 None:intergenic 45.0%
GGGATCGCAGAATGATGATT+TGG - Chr1:10376675-10376694 MsG0180000732.01.T01:CDS 45.0%
TATTCTTGCGTGATAGCTGG+GGG - Chr1:10377772-10377791 MsG0180000732.01.T01:CDS 45.0%
TCCAACTTCGGTGAATGATC+AGG + Chr1:10377515-10377534 None:intergenic 45.0%
TCCTGATCATTCACCGAAGT+TGG - Chr1:10377511-10377530 MsG0180000732.01.T01:CDS 45.0%
TCGGTGAATGATCAGGACTT+GGG + Chr1:10377508-10377527 None:intergenic 45.0%
TGAAAAGGATGCTCTTGTGG+CGG - Chr1:10376372-10376391 MsG0180000732.01.T01:CDS 45.0%
TGATCTGCCGGGTTATTTGT+CGG - Chr1:10376498-10376517 MsG0180000732.01.T01:CDS 45.0%
TGCATGTAACTCCGGTAAAC+AGG + Chr1:10377996-10378015 None:intergenic 45.0%
TGGTTCAGGTAGAGTTACAG+AGG - Chr1:10377382-10377401 MsG0180000732.01.T01:CDS 45.0%
TTCGGTGAATGATCAGGACT+TGG + Chr1:10377509-10377528 None:intergenic 45.0%
! AAGGTTTTCGATGCGGTTCA+TGG - Chr1:10376442-10376461 MsG0180000732.01.T01:CDS 45.0%
! ATGGGGCAGCAGAAATTTTC+TGG - Chr1:10377352-10377371 MsG0180000732.01.T01:CDS 45.0%
! CGTGTTGAAGGTTTTCGATG+CGG - Chr1:10376435-10376454 MsG0180000732.01.T01:CDS 45.0%
! GAGATGTTTTCCAAGCAGTC+AGG - Chr1:10377906-10377925 MsG0180000732.01.T01:CDS 45.0%
! GATTTCAACCGTCTTTTCGG+GGG - Chr1:10377273-10377292 MsG0180000732.01.T01:CDS 45.0%
! GGATTTCAACCGTCTTTTCG+GGG - Chr1:10377272-10377291 MsG0180000732.01.T01:CDS 45.0%
! TGGGGCAGCAGAAATTTTCT+GGG - Chr1:10377353-10377372 MsG0180000732.01.T01:CDS 45.0%
! TGTTTTCCAAGCAGTCAGGT+TGG - Chr1:10377910-10377929 MsG0180000732.01.T01:CDS 45.0%
!! AGATGGAAGTGTCCCAAGAT+TGG - Chr1:10377422-10377441 MsG0180000732.01.T01:CDS 45.0%
!! AGTTCTGGTTGTTCTGGTTC+TGG - Chr1:10376151-10376170 MsG0180000732.01.T01:CDS 45.0%
!! ATTGTGGGTTGGCTATTCAG+TGG - Chr1:10376563-10376582 MsG0180000732.01.T01:CDS 45.0%
!! GAAGGGCTGATTCTTTTCTC+CGG - Chr1:10377819-10377838 MsG0180000732.01.T01:CDS 45.0%
!! GGGAAAGCATTTGGAGTTTG+CGG - Chr1:10377035-10377054 MsG0180000732.01.T01:CDS 45.0%
!! GGGATCTTTTAGGGGATTCT+TGG - Chr1:10377709-10377728 MsG0180000732.01.T01:CDS 45.0%
!! TGGCTTGTTAGATGCTGCTT+TGG - Chr1:10376702-10376721 MsG0180000732.01.T01:CDS 45.0%
!! TTTCTGGGAACTTCTGGTTC+AGG - Chr1:10377368-10377387 MsG0180000732.01.T01:CDS 45.0%
ACAGAAACAGGCAAAGGCGA+AGG + Chr1:10376823-10376842 None:intergenic 50.0%
ACTCGGACACTGAGATCTCA+AGG + Chr1:10376975-10376994 None:intergenic 50.0%
AGCTCCCTGGACATTTGAGT+AGG - Chr1:10377796-10377815 MsG0180000732.01.T01:CDS 50.0%
AGTCGTTATTGTCGGATCCG+CGG - Chr1:10376473-10376492 MsG0180000732.01.T01:CDS 50.0%
CATGATCCAACCTGACTGCT+TGG + Chr1:10377919-10377938 None:intergenic 50.0%
CCGCAGCTTAGTGGAAAGTA+TGG - Chr1:10378146-10378165 MsG0180000732.01.T01:CDS 50.0%
CCTGGACATTTGAGTAGGGA+AGG - Chr1:10377801-10377820 MsG0180000732.01.T01:CDS 50.0%
CCTTCCCTACTCAAATGTCC+AGG + Chr1:10377804-10377823 None:intergenic 50.0%
GCTCCCTGGACATTTGAGTA+GGG - Chr1:10377797-10377816 MsG0180000732.01.T01:CDS 50.0%
GGCTGAAAAGGATGCTCTTG+TGG - Chr1:10376369-10376388 MsG0180000732.01.T01:CDS 50.0%
TAATAGGGCTGTAGGTCCTG+CGG - Chr1:10376408-10376427 MsG0180000732.01.T01:CDS 50.0%
TAATGTGAGGGCGAGTTTGC+AGG - Chr1:10376933-10376952 MsG0180000732.01.T01:CDS 50.0%
TCAAAGATAGCTGCACAGGC+AGG - Chr1:10377141-10377160 MsG0180000732.01.T01:CDS 50.0%
! GCATCCTTTTCAGCCCGAAT+CGG + Chr1:10376364-10376383 None:intergenic 50.0%
! GTCGGATTCTCTTGGTGATC+AGG - Chr1:10376786-10376805 MsG0180000732.01.T01:CDS 50.0%
! GTTACCTTGGCTTGAATCCG+CGG - Chr1:10376333-10376352 MsG0180000732.01.T01:CDS 50.0%
!! AGCTCAGTGGGGAAAGCATT+TGG - Chr1:10377026-10377045 MsG0180000732.01.T01:CDS 50.0%
!! CAAGCAGTCAGGTTGGATCA+TGG - Chr1:10377917-10377936 MsG0180000732.01.T01:CDS 50.0%
!! GAGTTTGCAGGCGCTGAATT+TGG - Chr1:10376945-10376964 MsG0180000732.01.T01:CDS 50.0%
!! GGCTGATTCTTTTCTCCGGA+GGG - Chr1:10377823-10377842 MsG0180000732.01.T01:CDS 50.0%
!! GGTTGTTCTGGTTCTGGTTC+TGG - Chr1:10376157-10376176 MsG0180000732.01.T01:CDS 50.0%
!! TCTGGTTCTGGTTCTGGTTC+TGG - Chr1:10376163-10376182 MsG0180000732.01.T01:CDS 50.0%
!! TGGGTTGGCTATTCAGTGGT+TGG - Chr1:10376567-10376586 MsG0180000732.01.T01:CDS 50.0%
!! TGTGCCGCTTCCTATGTTGT+CGG - Chr1:10376768-10376787 MsG0180000732.01.T01:CDS 50.0%
!!! GAGGAGGCGTTGAGGTTTTT+GGG - Chr1:10376535-10376554 MsG0180000732.01.T01:CDS 50.0%
!!! GGTTTTGAAGCGTCTTGAGG+AGG - Chr1:10376519-10376538 MsG0180000732.01.T01:CDS 50.0%
!!! GTCGGTTTTGAAGCGTCTTG+AGG - Chr1:10376516-10376535 MsG0180000732.01.T01:CDS 50.0%
!!! TGAGGAGGCGTTGAGGTTTT+TGG - Chr1:10376534-10376553 MsG0180000732.01.T01:CDS 50.0%
AAGGATGCTCTTGTGGCGGT+TGG - Chr1:10376376-10376395 MsG0180000732.01.T01:CDS 55.0%
AATCCGCGGTGAGACCGATT+CGG - Chr1:10376347-10376366 MsG0180000732.01.T01:CDS 55.0%
ACACTTCCATCTGGAGGAGG+AGG + Chr1:10377414-10377433 None:intergenic 55.0%
ACGCATCTCCCCCGAAAAGA+CGG + Chr1:10377284-10377303 None:intergenic 55.0%
AGGCTGTGGTGCCTGTTTAC+CGG - Chr1:10377982-10378001 MsG0180000732.01.T01:CDS 55.0%
CACTTCCATCTGGAGGAGGA+GGG + Chr1:10377413-10377432 None:intergenic 55.0%
CCACAGCCTGCACTATAAGC+TGG + Chr1:10377971-10377990 None:intergenic 55.0%
CCAGCTTATAGTGCAGGCTG+TGG - Chr1:10377968-10377987 MsG0180000732.01.T01:CDS 55.0%
CTTGACCAGATCACGAGCAG+TGG + Chr1:10377853-10377872 None:intergenic 55.0%
CTTGGACGCGATGTGTGGAT+GGG - Chr1:10377111-10377130 MsG0180000732.01.T01:CDS 55.0%
CTTGGGACACTTCCATCTGG+AGG + Chr1:10377420-10377439 None:intergenic 55.0%
GAAGCCGTACGACGAAGATC+AGG + Chr1:10378182-10378201 None:intergenic 55.0%
GACGTGCCAGCTTATAGTGC+AGG - Chr1:10377962-10377981 MsG0180000732.01.T01:CDS 55.0%
TAACCCGGCAGATCAATCCG+CGG + Chr1:10376493-10376512 None:intergenic 55.0%
TTCATGCTGCCGTGTCTTGC+AGG + Chr1:10378122-10378141 None:intergenic 55.0%
!! GAGACCGATTCGGGCTGAAA+AGG - Chr1:10376357-10376376 MsG0180000732.01.T01:CDS 55.0%
!! GGGCTGATTCTTTTCTCCGG+AGG - Chr1:10377822-10377841 MsG0180000732.01.T01:CDS 55.0%
AGAGGCTTGGACGCGATGTG+TGG - Chr1:10377106-10377125 MsG0180000732.01.T01:CDS 60.0%
CCAAACCCTCCTCCTCCAGA+TGG - Chr1:10377405-10377424 MsG0180000732.01.T01:CDS 60.0%
CCATCTGGAGGAGGAGGGTT+TGG + Chr1:10377408-10377427 None:intergenic 60.0%
CTCACCGCGGATTCAAGCCA+AGG + Chr1:10376340-10376359 None:intergenic 60.0%
CTGCCGTGTCTTGCAGGCTT+CGG + Chr1:10378116-10378135 None:intergenic 60.0%
GATGCTCTTGTGGCGGTTGG+AGG - Chr1:10376379-10376398 MsG0180000732.01.T01:CDS 60.0%
GCTTGGACGCGATGTGTGGA+TGG - Chr1:10377110-10377129 MsG0180000732.01.T01:CDS 60.0%
GGGACACTTCCATCTGGAGG+AGG + Chr1:10377417-10377436 None:intergenic 60.0%
! ATCCGCGGTGAGACCGATTC+GGG - Chr1:10376348-10376367 MsG0180000732.01.T01:CDS 60.0%
! GATCCGCGGATTGATCTGCC+GGG - Chr1:10376487-10376506 MsG0180000732.01.T01:CDS 60.0%
! GGATCCGCGGATTGATCTGC+CGG - Chr1:10376486-10376505 MsG0180000732.01.T01:CDS 60.0%
!! AGCGTCTTGAGGAGGCGTTG+AGG - Chr1:10376527-10376546 MsG0180000732.01.T01:CDS 60.0%
ACCTTCAACACGGCAGCCGC+AGG + Chr1:10376427-10376446 None:intergenic 65.0%
AGCCCGAATCGGTCTCACCG+CGG + Chr1:10376353-10376372 None:intergenic 65.0%
CGGCCGAAGCCTGCAAGACA+CGG - Chr1:10378110-10378129 MsG0180000732.01.T01:CDS 65.0%
CGTGTCTTGCAGGCTTCGGC+CGG + Chr1:10378112-10378131 None:intergenic 65.0%
GATAGCTGGGGGAAGCTCCC+TGG - Chr1:10377783-10377802 MsG0180000732.01.T01:CDS 65.0%
TCCTGCGGCTGCCGTGTTGA+AGG - Chr1:10376423-10376442 MsG0180000732.01.T01:CDS 65.0%
! GCGTGCCACTGCTCGTGATC+TGG - Chr1:10377845-10377864 MsG0180000732.01.T01:CDS 65.0%
ACGAGCAGTGGCACGCCCTC+CGG + Chr1:10377841-10377860 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 10376139 10378214 10376139 ID=MsG0180000732.01;Name=MsG0180000732.01
Chr1 mRNA 10376139 10378214 10376139 ID=MsG0180000732.01.T01;Parent=MsG0180000732.01;Name=MsG0180000732.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|691
Chr1 exon 10376139 10378214 10376139 ID=MsG0180000732.01.T01:exon:1329;Parent=MsG0180000732.01.T01
Chr1 CDS 10376139 10378214 10376139 ID=MsG0180000732.01.T01:cds;Parent=MsG0180000732.01.T01
Gene Sequence

>MsG0180000732.01.T01

ATGGCTGATTCTAGTTCTGGTTGTTCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCTGTTAGTTTGAAAAGTGATAGTAGAATTGAGAATTTGATTTTAGCTAGTAAATCATTGAAACTTAGTTTAGACAAATCAAAGAGTGTTGGATTAGCATTAGAGAAAGCAGGTCCAAGGTTAGATGAGATTAGGGTAAGGTTACCTTGGCTTGAATCCGCGGTGAGACCGATTCGGGCTGAAAAGGATGCTCTTGTGGCGGTTGGAGGTCATATTAATAGGGCTGTAGGTCCTGCGGCTGCCGTGTTGAAGGTTTTCGATGCGGTTCATGGACTTGAGAAGTCGTTATTGTCGGATCCGCGGATTGATCTGCCGGGTTATTTGTCGGTTTTGAAGCGTCTTGAGGAGGCGTTGAGGTTTTTGGGAGATAATTGTGGGTTGGCTATTCAGTGGTTGGATGATATAGTTGAGTATTTAGAAGATAATTCGGTTGCGGATCAGGTTTATCTTAAGAATTTGAAGAAGGAGTTAGAGAGTCTTAAGGGATCGCAGAATGATGATTTGGATGGTGGCTTGTTAGATGCTGCTTTGGATAAATTAGAGAATGAGTTTAGGTTGCTTTTAACGGAAAACAGTGTGCCGCTTCCTATGTTGTCGGATTCTCTTGGTGATCAGGCTTGCATTGCACCTTCGCCTTTGCCTGTTTCTGTTGTTCACAAATTGCAGGCTATTCTTGGTAGGTTGAGAGCTAATGATAGGCTTGACAAGTGTGTGTCGATTTACGTTGAAGTTAGAAGTTCTAATGTGAGGGCGAGTTTGCAGGCGCTGAATTTGGATTACCTTGAGATCTCAGTGTCCGAGTTCAATGATGTGCAGAGCATAGAGGTGTATATAGCTCAGTGGGGAAAGCATTTGGAGTTTGCGGTGAAACATTTGTTTGAGGCTGAGTATAAGCTTTGTAACGATGTGTTTGAGAGGCTTGGACGCGATGTGTGGATGGGTTGCTTCTCAAAGATAGCTGCACAGGCAGGTATACTTGCATTTCTTCAATTCGGTAAGACTGTTACAGAGAGTAAGAAAGATCCCATTAAGCTTTTGAAGTTGTTGGATATTTTTGCGTCGTTGAACAAATTGAGACTGGATTTCAACCGTCTTTTCGGGGGAGATGCGTGCGTCGAAATCCAAAATTTGACAAGGGAACTTATCAAGAGTGTGATTGATGGGGCAGCAGAAATTTTCTGGGAACTTCTGGTTCAGGTAGAGTTACAGAGGCCAAACCCTCCTCCTCCAGATGGAAGTGTCCCAAGATTGGTGAGCTTTATCACTGATTACTGCAATAAACTCTTGGGGGACGACTATAAGCCTATACTGACCCAAGTCCTGATCATTCACCGAAGTTGGAAACGTCAAAGCTTTCAGGAGAGGCTCCTCGTTAATGAGATTTTGAACATATTGAAAGCCGTTGAGTTAAATTTGGAGACGTGGATCAAGGCTTATGATGATCCTATGTTGTCCAACTTTTTTGCAATGAACAATCACTGGCATCTGTTCAAACATTTGAAAGGGACAAAGCTTGGGGATCTTTTAGGGGATTCTTGGTTAAAAGAACACGAACAGTATAAAGACTATTACTCCACAATATTCTTGCGTGATAGCTGGGGGAAGCTCCCTGGACATTTGAGTAGGGAAGGGCTGATTCTTTTCTCCGGAGGGCGTGCCACTGCTCGTGATCTGGTCAAGAAAAGATTGAAAAAATTCAACGAGGTTTTTGATGAGATGTTTTCCAAGCAGTCAGGTTGGATCATGGTAGAACGAGATCTGAGAGAGAAGACGTGCCAGCTTATAGTGCAGGCTGTGGTGCCTGTTTACCGGAGTTACATGCAGAATTATGGTCCCTTGGTTGAGCAAGATAACAGCTCCAATAAATATGCAAAATACACAGTACAGAAGCTGGAAGAAATGCTTTTGTGTCTTTACCGGCCGAAGCCTGCAAGACACGGCAGCATGAAAAGTCCGCAGCTTAGTGGAAAGTATGGAAATGGAATGCCTGATCTTCGTCGTACGGCTTCAGCAGTTGTGTAG

Protein sequence

>MsG0180000732.01.T01

MADSSSGCSGSGSGSGSGSVSLKSDSRIENLILASKSLKLSLDKSKSVGLALEKAGPRLDEIRVRLPWLESAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRIDLPGYLSVLKRLEEALRFLGDNCGLAIQWLDDIVEYLEDNSVADQVYLKNLKKELESLKGSQNDDLDGGLLDAALDKLENEFRLLLTENSVPLPMLSDSLGDQACIAPSPLPVSVVHKLQAILGRLRANDRLDKCVSIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEVYIAQWGKHLEFAVKHLFEAEYKLCNDVFERLGRDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGDACVEIQNLTRELIKSVIDGAAEIFWELLVQVELQRPNPPPPDGSVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQERLLVNEILNILKAVELNLETWIKAYDDPMLSNFFAMNNHWHLFKHLKGTKLGDLLGDSWLKEHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMFSKQSGWIMVERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDNSSNKYAKYTVQKLEEMLLCLYRPKPARHGSMKSPQLSGKYGNGMPDLRRTASAVV*