AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016604.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016604.01.T01 MTR_3g092550 97.938 388 4 1 1 388 1 384 0.0 789
MsG0380016604.01.T01 MTR_3g092510 77.556 401 50 11 1 386 1 376 0.0 598
MsG0380016604.01.T01 MTR_2g070540 62.411 282 90 3 104 384 28 294 3.81e-118 345
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016604.01.T01 AT4G10610 62.985 335 98 4 55 388 27 336 2.33e-147 421
MsG0380016604.01.T01 AT1G32790 65.495 313 96 3 79 388 55 358 2.03e-144 414
MsG0380016604.01.T01 AT3G49390 54.617 379 137 6 1 379 1 344 1.24e-141 407
MsG0380016604.01.T01 AT3G49390 46.465 99 47 4 195 292 258 351 9.03e-14 72.4
MsG0380016604.01.T01 AT3G49390 54.617 379 137 6 1 379 1 344 1.24e-141 407
MsG0380016604.01.T01 AT3G49390 46.465 99 47 4 195 292 258 351 9.03e-14 72.4
MsG0380016604.01.T01 AT3G49390 54.617 379 137 6 1 379 1 344 1.24e-141 407
MsG0380016604.01.T01 AT3G49390 46.465 99 47 4 195 292 258 351 9.03e-14 72.4
MsG0380016604.01.T01 AT4G10610 62.342 316 94 3 55 370 27 317 5.72e-138 397
MsG0380016604.01.T01 AT1G32790 64.548 299 90 3 79 372 55 342 3.37e-133 387
MsG0380016604.01.T01 AT1G32790 41.772 79 45 1 300 378 173 250 4.74e-12 67.4
MsG0380016604.01.T01 AT3G14450 59.790 286 103 3 103 386 49 324 1.48e-119 350
MsG0380016604.01.T01 AT1G53650 60.351 285 84 4 103 386 49 305 3.15e-118 346
MsG0380016604.01.T01 AT1G53650 75.500 200 49 0 187 386 112 311 5.24e-111 328
MsG0380016604.01.T01 AT5G24440 46.579 380 135 8 1 379 1 313 1.97e-109 324
MsG0380016604.01.T01 AT1G34140 27.545 167 105 6 202 364 30 184 4.68e-11 64.3

Find 133 sgRNAs with CRISPR-Local

Find 513 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATGCTTCAGAATAATTT+TGG 0.133726 3:-85619164 MsG0380016604.01.T01:CDS
CGATTCTTCCAGTGAGAATT+TGG 0.139421 3:-85619576 MsG0380016604.01.T01:CDS
TGAAGCATAAAATTGTTATT+AGG 0.187478 3:+85619176 None:intergenic
CTCACTGGAAGAATCGATTT+TGG 0.195831 3:+85619583 None:intergenic
GTTCAGATTCTGATCGGTTT+TGG 0.204217 3:+85619502 None:intergenic
GAGAAGAGAGAAGGGTTAAA+AGG 0.211159 3:+85619881 None:intergenic
GAGCTGTAGTGGTGTGGTTT+TGG 0.233396 3:-85613837 MsG0380016604.01.T01:CDS
GAATCATCCTTCATGTTTCT+AGG 0.241925 3:-85613655 MsG0380016604.01.T01:three_prime_UTR
GAAGCATAAAATTGTTATTA+GGG 0.271323 3:+85619177 None:intergenic
TGATGGGTATGGTGGGAATG+GGG 0.303136 3:-85619342 MsG0380016604.01.T01:CDS
CAAGCGTGAAATGAGGGATT+TGG 0.308282 3:-85619309 MsG0380016604.01.T01:CDS
GCTAATGCTACTGCTAATAA+TGG 0.308481 3:-85619119 MsG0380016604.01.T01:CDS
GTTCAACGTCTGAGGCTTCT+TGG 0.322437 3:-85617539 MsG0380016604.01.T01:CDS
TTGATGGGTATGGTGGGAAT+GGG 0.325031 3:-85619343 MsG0380016604.01.T01:CDS
TTCAACGTCTGAGGCTTCTT+GGG 0.327500 3:-85617538 MsG0380016604.01.T01:CDS
CTCATATGCAATGTTAAGAT+TGG 0.329197 3:-85613263 MsG0380016604.01.T01:three_prime_UTR
TGCAAACCGAAGAATGGAAT+TGG 0.331294 3:+85618296 None:intergenic
AGATACCATACTGCAAGTTT+TGG 0.337934 3:+85613536 None:intergenic
GTTGATGGGTATGGTGGGAA+TGG 0.353054 3:-85619344 MsG0380016604.01.T01:CDS
TGGTTTCATGGCTCATCAAA+TGG 0.357089 3:-85619405 MsG0380016604.01.T01:CDS
GATGGGTATGGTGGGAATGG+GGG 0.359851 3:-85619341 MsG0380016604.01.T01:CDS
ACCAACAACGTTGGTGTTAA+CGG 0.363856 3:+85619472 None:intergenic
AAATGGTAACCATGGTTTCA+TGG 0.371051 3:-85619417 MsG0380016604.01.T01:CDS
CGTTTGTTGAGAAGTGATTA+TGG 0.379479 3:-85619627 MsG0380016604.01.T01:exon
CAGAATCAGCATTTGGTTGA+TGG 0.381258 3:-85619359 MsG0380016604.01.T01:CDS
ATGGGTCAGATGCATGGAAA+TGG 0.381795 3:-85619386 MsG0380016604.01.T01:CDS
TGTTGCCAAAACTTGCAGTA+TGG 0.385142 3:-85613541 MsG0380016604.01.T01:three_prime_UTR
TTATGTCTACAGTTGGTGCT+AGG 0.385817 3:-85618178 MsG0380016604.01.T01:intron
GCTGATACATAAATCAATAA+AGG 0.396239 3:-85619660 MsG0380016604.01.T01:five_prime_UTR
AGAAGAGAGAAGGGTTAAAA+GGG 0.396479 3:+85619882 None:intergenic
TGTGTCTGACATTGATCAAC+AGG 0.401213 3:-85618883 MsG0380016604.01.T01:intron
TATATGTAAATATATATCTC+TGG 0.401309 3:+85613620 None:intergenic
GGGATCCCAATTCCATTCTT+CGG 0.402516 3:-85618302 MsG0380016604.01.T01:CDS
ATTTGTTGATCCAACCTTAT+GGG 0.408252 3:+85613806 None:intergenic
TGAACTATTTAGTTTATGTC+TGG 0.409318 3:-85613321 MsG0380016604.01.T01:three_prime_UTR
TGGGGTTCAGAATCAGCATT+TGG 0.410154 3:-85619366 MsG0380016604.01.T01:CDS
GGGTAACCAAACCCAGCATT+AGG 0.413098 3:+85619197 None:intergenic
ATTTGTGCAATAAATTGTTC+TGG 0.413198 3:+85617914 None:intergenic
GCTCGGACTGGTGTCTTTGA+TGG 0.415717 3:+85613704 None:intergenic
AAGAGAGAGAGAAGAGAGAA+GGG 0.416331 3:+85619873 None:intergenic
GGAATTTGTGCCACCTTCAC+TGG 0.418984 3:-85619252 MsG0380016604.01.T01:CDS
AACCTGTCTGGAACCATGCT+TGG 0.422116 3:-85618146 MsG0380016604.01.T01:CDS
AGTGTATCATAAGATGGATA+TGG 0.424924 3:-85618940 MsG0380016604.01.T01:CDS
TTAGCTGCTGGACCTAATGC+TGG 0.426185 3:-85619209 MsG0380016604.01.T01:CDS
ATGAAACCATGGTTACCATT+TGG 0.426411 3:+85619419 None:intergenic
TGGGTCAGATGCATGGAAAT+GGG 0.429882 3:-85619385 MsG0380016604.01.T01:CDS
GCTGGACCTAATGCTGGGTT+TGG 0.431619 3:-85619203 MsG0380016604.01.T01:CDS
AGGGCTGCTTTGAACCTGTC+TGG 0.436132 3:-85618158 MsG0380016604.01.T01:CDS
CTTCATGTTTCTAGGATGAA+TGG 0.440373 3:-85613647 MsG0380016604.01.T01:three_prime_UTR
CTTTAAGGCTTAAGTTATGC+TGG 0.441072 3:-85613445 MsG0380016604.01.T01:three_prime_UTR
ACCGTTAACACCAACGTTGT+TGG 0.450994 3:-85619473 MsG0380016604.01.T01:CDS
TCACTTTGATCTTATGTCAA+TGG 0.452034 3:-85619825 MsG0380016604.01.T01:five_prime_UTR
TAAAAGGGTAATTATAAAGA+AGG 0.453051 3:+85619897 None:intergenic
AGAAAAGAGAAGAGATGATT+CGG 0.457909 3:-85618917 MsG0380016604.01.T01:CDS
TTGTTGATTGCCGAGTATGC+GGG 0.466260 3:-85618323 MsG0380016604.01.T01:CDS
ATGAACACCTATGTTATGTA+TGG 0.468098 3:+85620024 None:intergenic
TATGTCTACAGTTGGTGCTA+GGG 0.469753 3:-85618177 MsG0380016604.01.T01:intron
TTCGTTGAGTTTACTGATGA+AGG 0.475411 3:-85618273 MsG0380016604.01.T01:intron
CAGCATTTGGTTGATGGGTA+TGG 0.475828 3:-85619353 MsG0380016604.01.T01:CDS
GGTTGGATGTTTGTAACATC+CGG 0.478074 3:-85613396 MsG0380016604.01.T01:three_prime_UTR
AGAATCAGCATTTGGTTGAT+GGG 0.479989 3:-85619358 MsG0380016604.01.T01:CDS
TCGTAAAGTGAGAAATTTGA+AGG 0.480640 3:+85619848 None:intergenic
AACGAATGCAAACCGAAGAA+TGG 0.495857 3:+85618290 None:intergenic
GGACAACAGTGTTGTTTCAT+CGG 0.497652 3:-85619555 MsG0380016604.01.T01:CDS
ATGTGTTTAACTTGTAGAGT+TGG 0.498488 3:-85613484 MsG0380016604.01.T01:three_prime_UTR
GCAAACCGAAGAATGGAATT+GGG 0.498667 3:+85618297 None:intergenic
CTCGCAACGAGAGACTTCTA+TGG 0.500706 3:-85613417 MsG0380016604.01.T01:three_prime_UTR
TCACTGGTTACTAATTATCA+TGG 0.506556 3:-85619236 MsG0380016604.01.T01:CDS
GGTGCAATAGCAGTCTTTGA+AGG 0.507414 3:+85618101 None:intergenic
TTTGAAGGCAGCACTCTCAA+TGG 0.508142 3:+85618116 None:intergenic
CTAGGTTACTGAAGAGCAGC+TGG 0.510566 3:-85618762 MsG0380016604.01.T01:intron
TATCATGGCTACTTAGCTGC+TGG 0.511744 3:-85619221 MsG0380016604.01.T01:CDS
GGTTTCATGGCTCATCAAAT+GGG 0.513313 3:-85619404 MsG0380016604.01.T01:CDS
GCTGGTGTTCAGATTCTGAT+CGG 0.518281 3:+85619496 None:intergenic
TCTCTTTCTTAACTGCGGCC+AGG 0.521464 3:-85618735 MsG0380016604.01.T01:intron
GAAGAGAGAGAGAAGAGAGA+AGG 0.522120 3:+85619872 None:intergenic
GTTGTCAAAACTGAATCCTA+TGG 0.523923 3:-85619279 MsG0380016604.01.T01:CDS
ATGAAGGATGATTCAGTGCA+TGG 0.525722 3:+85613664 None:intergenic
TAGCTGCTGGACCTAATGCT+GGG 0.527554 3:-85619208 MsG0380016604.01.T01:CDS
AACGTTGGTGTTAACGGTGC+TGG 0.531117 3:+85619478 None:intergenic
CAACAAGACAGTGTTCCAAA+TGG 0.534163 3:-85619434 MsG0380016604.01.T01:CDS
CATTTGGTTGATGGGTATGG+TGG 0.535130 3:-85619350 MsG0380016604.01.T01:CDS
AATTGGGATCCCCGCATACT+CGG 0.536460 3:+85618313 None:intergenic
CATCAAATGGGTCAGATGCA+TGG 0.537520 3:-85619392 MsG0380016604.01.T01:CDS
AAGCAATCCGAGTTGAATGA+TGG 0.541752 3:+85617510 None:intergenic
TTGCACAAATCTCGACAAGA+AGG 0.542950 3:-85617901 MsG0380016604.01.T01:intron
GCGTGAAATGAGGGATTTGG+AGG 0.545654 3:-85619306 MsG0380016604.01.T01:CDS
TCAACGTCTGAGGCTTCTTG+GGG 0.545879 3:-85617537 MsG0380016604.01.T01:CDS
ATATGTAAATATATATCTCT+GGG 0.546734 3:+85613621 None:intergenic
GCGAAGAGTGTATCATAAGA+TGG 0.548157 3:-85618946 MsG0380016604.01.T01:CDS
ATTGCTGCACTGAGCTGTAG+TGG 0.548385 3:-85613848 MsG0380016604.01.T01:CDS
GAGTTTCAAGCGTGAAATGA+GGG 0.552128 3:-85619315 MsG0380016604.01.T01:CDS
ACTGTTGTCCAAATTCTCAC+TGG 0.555026 3:+85619568 None:intergenic
ATCCAAGCATGGTTCCAGAC+AGG 0.558907 3:+85618144 None:intergenic
TTTAAATAAACAGTAAACTC+CGG 0.559741 3:+85613377 None:intergenic
GTTGTGTTGCAGAGGAAGAA+TGG 0.563277 3:-85618984 MsG0380016604.01.T01:intron
GAGTACGAACAGCACGAGCT+CGG 0.564193 3:+85613687 None:intergenic
TCATGTAGGTTCAACGTCTG+AGG 0.564696 3:-85617547 MsG0380016604.01.T01:intron
AAAACTGAATCCTATGGCTG+AGG 0.567529 3:-85619273 MsG0380016604.01.T01:CDS
AGAGTTTCAAGCGTGAAATG+AGG 0.568029 3:-85619316 MsG0380016604.01.T01:CDS
TGCACTGAGCTGTAGTGGTG+TGG 0.569054 3:-85613843 MsG0380016604.01.T01:CDS
GTTGTTGATTGCCGAGTATG+CGG 0.576812 3:-85618324 MsG0380016604.01.T01:CDS
CAACGAGAGACTTCTATGGT+TGG 0.577394 3:-85613413 MsG0380016604.01.T01:three_prime_UTR
ATGGCGGTAGCTGAGAATGT+TGG 0.580311 3:-85619608 MsG0380016604.01.T01:CDS
TAATGGACAGATTAACAGAA+GGG 0.581694 3:-85619102 MsG0380016604.01.T01:intron
CTTTGAATCTATCTGTGGCG+AGG 0.582020 3:-85617731 MsG0380016604.01.T01:intron
CGAACAGCACGAGCTCGGAC+TGG 0.585672 3:+85613692 None:intergenic
CACTTCTTTGAATCTATCTG+TGG 0.587202 3:-85617736 MsG0380016604.01.T01:CDS
ATTTGGTTGATGGGTATGGT+GGG 0.591826 3:-85619349 MsG0380016604.01.T01:CDS
AGTTCATTACTAACTAACAA+AGG 0.600833 3:+85613338 None:intergenic
CACCTATGTTATGTATGGTA+TGG 0.600946 3:+85620029 None:intergenic
TGAAGGATGATTCAGTGCAT+GGG 0.603830 3:+85613665 None:intergenic
CATTCATCCTAGAAACATGA+AGG 0.606080 3:+85613648 None:intergenic
GGGATTACCATCATTCAACT+CGG 0.607758 3:-85617517 MsG0380016604.01.T01:CDS
TGTTGATTGCCGAGTATGCG+GGG 0.611381 3:-85618322 MsG0380016604.01.T01:CDS
TTTGATGAGCCATGAAACCA+TGG 0.614650 3:+85619408 None:intergenic
AAAGAGAAGAGATGATTCGG+AGG 0.615099 3:-85618914 MsG0380016604.01.T01:CDS
ATAATGGACAGATTAACAGA+AGG 0.615554 3:-85619103 MsG0380016604.01.T01:CDS
AGTGTTCCAAATGGTAACCA+TGG 0.620845 3:-85619425 MsG0380016604.01.T01:CDS
GCGGCTCTCTTTCTTAACTG+CGG 0.622650 3:-85618740 MsG0380016604.01.T01:CDS
GGGTCAGATGCATGGAAATG+GGG 0.623897 3:-85619384 MsG0380016604.01.T01:CDS
TGATAATTAGTAACCAGTGA+AGG 0.626417 3:+85619239 None:intergenic
GGCACAAATTCCTCAGCCAT+AGG 0.629252 3:+85619263 None:intergenic
CAATGGATAATATCCAAGCA+TGG 0.634411 3:+85618133 None:intergenic
AAGTCTCAACTAAACGCCAC+AGG 0.634844 3:+85613563 None:intergenic
TGTTTCATCGGACTCAACTG+AGG 0.647222 3:-85619543 MsG0380016604.01.T01:CDS
AGCCATACCATACATAACAT+AGG 0.652113 3:-85620031 MsG0380016604.01.T01:five_prime_UTR
TAATTAGTAACCAGTGAAGG+TGG 0.655408 3:+85619242 None:intergenic
ATTGATCACACCAACAACGT+TGG 0.675812 3:+85619463 None:intergenic
TGTGAAAGTGATGACGATGA+AGG 0.679267 3:+85619987 None:intergenic
GGTTACTGAAGAGCAGCTGG+CGG 0.706094 3:-85618759 MsG0380016604.01.T01:CDS
TGTAAATATATATCTCTGGG+CGG 0.706420 3:+85613624 None:intergenic
TTGTTGAGAAGTGATTATGG+CGG 0.738475 3:-85619624 MsG0380016604.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTAATATGATAATTATATA+TGG - Chr3:85618904-85618923 MsG0380016604.01.T01:CDS 10.0%
!!! TTTGTGTTTTAATTATTTTT+TGG - Chr3:85615073-85615092 MsG0380016604.01.T01:intron 10.0%
!!! TTTTTTTTTTTTAACAGAAA+TGG + Chr3:85619376-85619395 None:intergenic 10.0%
!! AAATTAAAATACACAGAAAA+TGG - Chr3:85618799-85618818 MsG0380016604.01.T01:intron 15.0%
!! ATAATAATGTCAAATTCTTT+AGG - Chr3:85617499-85617518 MsG0380016604.01.T01:CDS 15.0%
!! ATATGTAAATATATATCTCT+GGG + Chr3:85619677-85619696 None:intergenic 15.0%
!! GTTACAAAATATATAGTATT+TGG + Chr3:85617810-85617829 None:intergenic 15.0%
!! TATATGTAAATATATATCTC+TGG + Chr3:85619678-85619697 None:intergenic 15.0%
!! TATGATAATTATATATGGAT+TGG - Chr3:85618909-85618928 MsG0380016604.01.T01:CDS 15.0%
!!! AGACAAAATGAATTTATTTT+CGG + Chr3:85615995-85616014 None:intergenic 15.0%
!!! ATAGAAACATATATGTTTTA+AGG - Chr3:85619707-85619726 MsG0380016604.01.T01:intron 15.0%
!!! GTAAAATATTTCCATTATTT+TGG - Chr3:85615720-85615739 MsG0380016604.01.T01:intron 15.0%
!!! TATCAAATGTTATTTTATGA+TGG - Chr3:85617297-85617316 MsG0380016604.01.T01:intron 15.0%
!! AACAAAATAATCAGTGAAAA+TGG + Chr3:85617964-85617983 None:intergenic 20.0%
!! ACAAAATAATCAGTGAAAAT+GGG + Chr3:85617963-85617982 None:intergenic 20.0%
!! ACAAAATATATATAACACAC+AGG + Chr3:85618886-85618905 None:intergenic 20.0%
!! ACATGAATAAACCAAAATAA+TGG + Chr3:85615734-85615753 None:intergenic 20.0%
!! ATTATTATTGCCCAAAAAAT+AGG + Chr3:85617487-85617506 None:intergenic 20.0%
!! ATTTCTGTTGAAATTACTAA+AGG + Chr3:85617716-85617735 None:intergenic 20.0%
!! CAGAAAAGATAAAAAATATC+AGG + Chr3:85615304-85615323 None:intergenic 20.0%
!! TAAAAGGGTAATTATAAAGA+AGG + Chr3:85613401-85613420 None:intergenic 20.0%
!! TCAAAAAAAAAAACATACCT+GGG + Chr3:85613518-85613537 None:intergenic 20.0%
!! TTATTAACATTTGTCTCAAT+AGG - Chr3:85619307-85619326 MsG0380016604.01.T01:CDS 20.0%
!! TTATTATTGCCCAAAAAATA+GGG + Chr3:85617486-85617505 None:intergenic 20.0%
!! TTCAAAAAAAAAAACATACC+TGG + Chr3:85613519-85613538 None:intergenic 20.0%
!! TTCAACAGAAATTTATATGA+TGG - Chr3:85617724-85617743 MsG0380016604.01.T01:intron 20.0%
!! TTTAAATAAACAGTAAACTC+CGG + Chr3:85619921-85619940 None:intergenic 20.0%
!! TTTGTGAAATTATAATCGAT+AGG - Chr3:85615910-85615929 MsG0380016604.01.T01:intron 20.0%
!!! AAAATCGGTTTTTTTTTATG+TGG - Chr3:85613540-85613559 MsG0380016604.01.T01:three_prime_UTR 20.0%
!!! AAAATGAATTTATTTTCGGA+AGG + Chr3:85615991-85616010 None:intergenic 20.0%
!!! AAATCGGTTTTTTTTTATGT+GGG - Chr3:85613541-85613560 MsG0380016604.01.T01:three_prime_UTR 20.0%
!!! AAGTACGAAACAATTTATTT+TGG + Chr3:85616444-85616463 None:intergenic 20.0%
!!! AATCATTTGTTCTTATGTTT+TGG - Chr3:85619554-85619573 MsG0380016604.01.T01:CDS 20.0%
!!! AGTACGAAACAATTTATTTT+GGG + Chr3:85616443-85616462 None:intergenic 20.0%
!!! AGTGTTTGACTATTTAATTT+TGG - Chr3:85615689-85615708 MsG0380016604.01.T01:intron 20.0%
!!! ATAATTATATATGGATTGGT+CGG - Chr3:85618913-85618932 MsG0380016604.01.T01:CDS 20.0%
!!! ATATTTTTCAGTATCTGTTT+TGG - Chr3:85615462-85615481 MsG0380016604.01.T01:intron 20.0%
!!! GAAGCATAAAATTGTTATTA+GGG + Chr3:85614121-85614140 None:intergenic 20.0%
!!! TACTATATATTTTGTAACCT+AGG - Chr3:85617812-85617831 MsG0380016604.01.T01:intron 20.0%
!!! TATAATACTGATTGGAAATT+TGG - Chr3:85619192-85619211 MsG0380016604.01.T01:CDS 20.0%
!!! TGAAGCATAAAATTGTTATT+AGG + Chr3:85614122-85614141 None:intergenic 20.0%
!!! TTATTTTGGTTTATTCATGT+AGG - Chr3:85615734-85615753 MsG0380016604.01.T01:intron 20.0%
!!! TTTATGCTTCAGAATAATTT+TGG - Chr3:85614131-85614150 MsG0380016604.01.T01:intron 20.0%
! AAAAGGAAGTTGAAACTAAT+AGG + Chr3:85619111-85619130 None:intergenic 25.0%
! AAAATGGTAAAGAATTGAGA+TGG - Chr3:85618815-85618834 MsG0380016604.01.T01:intron 25.0%
! AAACTAAACACAATATCGAA+AGG + Chr3:85614264-85614283 None:intergenic 25.0%
! AAAGGAAGTTGAAACTAATA+GGG + Chr3:85619110-85619129 None:intergenic 25.0%
! AAATGGTAAAGAATTGAGAT+GGG - Chr3:85618816-85618835 MsG0380016604.01.T01:intron 25.0%
! AACAGATACTGAAAAATATC+AGG + Chr3:85615461-85615480 None:intergenic 25.0%
! ACAGAATTATCTTACAGAAA+AGG + Chr3:85619128-85619147 None:intergenic 25.0%
! ACAGATACTGAAAAATATCA+GGG + Chr3:85615460-85615479 None:intergenic 25.0%
! ACATAAGAACAAATGATTGA+AGG + Chr3:85619552-85619571 None:intergenic 25.0%
! AGTTCATTACTAACTAACAA+AGG + Chr3:85619960-85619979 None:intergenic 25.0%
! ATAGAGACTTAGGTATTATA+AGG + Chr3:85616408-85616427 None:intergenic 25.0%
! ATATATAGTATTTGGATGCA+AGG + Chr3:85617802-85617821 None:intergenic 25.0%
! ATTATTTCCCTTAAATGGTA+GGG + Chr3:85617551-85617570 None:intergenic 25.0%
! ATTTGTGCAATAAATTGTTC+TGG + Chr3:85615384-85615403 None:intergenic 25.0%
! CGATAAATACACCAAAATAA+CGG + Chr3:85615663-85615682 None:intergenic 25.0%
! CTGTAAAAACTAACTATCAA+GGG - Chr3:85616050-85616069 MsG0380016604.01.T01:intron 25.0%
! GACAACGATTAAATAGTTAA+CGG + Chr3:85617142-85617161 None:intergenic 25.0%
! GATCTACCATTAGAAAATTA+CGG + Chr3:85616730-85616749 None:intergenic 25.0%
! GCTGATACATAAATCAATAA+AGG - Chr3:85613635-85613654 MsG0380016604.01.T01:three_prime_UTR 25.0%
! TATATAGTATTTGGATGCAA+GGG + Chr3:85617801-85617820 None:intergenic 25.0%
! TATTATTGCCCAAAAAATAG+GGG + Chr3:85617485-85617504 None:intergenic 25.0%
! TCCAATCAGTATTATACTAA+GGG + Chr3:85619188-85619207 None:intergenic 25.0%
! TCTGTAAAAACTAACTATCA+AGG - Chr3:85616049-85616068 MsG0380016604.01.T01:intron 25.0%
! TGTAAAAACTAACTATCAAG+GGG - Chr3:85616051-85616070 MsG0380016604.01.T01:intron 25.0%
! TTCCAATCAGTATTATACTA+AGG + Chr3:85619189-85619208 None:intergenic 25.0%
! TTCTTTGTATTAAGTAATCG+AGG - Chr3:85617421-85617440 MsG0380016604.01.T01:intron 25.0%
!! TAGTTTCCTTTTCTTAATGA+TGG - Chr3:85614907-85614926 MsG0380016604.01.T01:intron 25.0%
!! TGAACTATTTAGTTTATGTC+TGG - Chr3:85619974-85619993 MsG0380016604.01.T01:five_prime_UTR 25.0%
!!! AAGGATTGTTGTTTTTATGT+TGG - Chr3:85614507-85614526 MsG0380016604.01.T01:intron 25.0%
!!! ATGAAGATTTGGTCTATTTT+CGG - Chr3:85616862-85616881 MsG0380016604.01.T01:intron 25.0%
!!! ATGTATTTTTGCCAAATCTT+GGG - Chr3:85617648-85617667 MsG0380016604.01.T01:intron 25.0%
!!! CGTTATTTTGGTGTATTTAT+CGG - Chr3:85615661-85615680 MsG0380016604.01.T01:intron 25.0%
!!! GATAGTTAGTTTTTACAGAA+TGG + Chr3:85616048-85616067 None:intergenic 25.0%
!!! GTACGAAACAATTTATTTTG+GGG + Chr3:85616442-85616461 None:intergenic 25.0%
!!! GTTATTTTGGTGTATTTATC+GGG - Chr3:85615662-85615681 MsG0380016604.01.T01:intron 25.0%
!!! GTTCATTAGTTTTGGATTAA+TGG - Chr3:85617671-85617690 MsG0380016604.01.T01:intron 25.0%
!!! GTTTGACTATTTAATTTTGG+AGG - Chr3:85615692-85615711 MsG0380016604.01.T01:intron 25.0%
!!! TGTTTTTAATCCCTAAGATA+AGG + Chr3:85616623-85616642 None:intergenic 25.0%
!!! TTATTTTGGTGTATTTATCG+GGG - Chr3:85615663-85615682 MsG0380016604.01.T01:intron 25.0%
!!! TTGTTTTTATGTTGGAATCT+AGG - Chr3:85614515-85614534 MsG0380016604.01.T01:intron 25.0%
AAAAATAGGGGCAAAACTAA+TGG + Chr3:85617473-85617492 None:intergenic 30.0%
AAACACAAACGACAATGTAA+CGG + Chr3:85615062-85615081 None:intergenic 30.0%
AAAGATATAGGAGATAGCAT+TGG + Chr3:85617219-85617238 None:intergenic 30.0%
AACAAATCCCTACCATTTAA+GGG - Chr3:85617541-85617560 MsG0380016604.01.T01:CDS 30.0%
AACTTGACAATTTCTACCTA+TGG + Chr3:85616819-85616838 None:intergenic 30.0%
AATCGAGGTTAATTGAATCT+AGG - Chr3:85617436-85617455 MsG0380016604.01.T01:intron 30.0%
AGAAAAGAGAAGAGATGATT+CGG - Chr3:85614378-85614397 MsG0380016604.01.T01:intron 30.0%
AGAAACTAATGAAGCTAAGA+TGG + Chr3:85618055-85618074 None:intergenic 30.0%
AGACATAAAACCGTTAATTC+AGG + Chr3:85615105-85615124 None:intergenic 30.0%
AGTGTATCATAAGATGGATA+TGG - Chr3:85614355-85614374 MsG0380016604.01.T01:intron 30.0%
AGTTAGTGAATACAACATAC+AGG + Chr3:85617183-85617202 None:intergenic 30.0%
ATACCTAAGTCTCTATTTGT+TGG - Chr3:85616412-85616431 MsG0380016604.01.T01:intron 30.0%
ATACTAAGGGAATAAAGATC+AGG + Chr3:85619175-85619194 None:intergenic 30.0%
ATACTCCAAAAGAAGAATAC+AGG + Chr3:85616586-85616605 None:intergenic 30.0%
ATATAGTATTTGGATGCAAG+GGG + Chr3:85617800-85617819 None:intergenic 30.0%
ATGAACACCTATGTTATGTA+TGG + Chr3:85613274-85613293 None:intergenic 30.0%
ATTCAGCAATATGAAATGCT+TGG + Chr3:85616105-85616124 None:intergenic 30.0%
CAGAAATGCATAAAATTGCA+AGG + Chr3:85618030-85618049 None:intergenic 30.0%
CCGCTTAAAAAAACTCAAAA+GGG - Chr3:85616480-85616499 MsG0380016604.01.T01:intron 30.0%
CTAAGAAGAAAAATTACCCT+GGG + Chr3:85615239-85615258 None:intergenic 30.0%
CTCATATGCAATGTTAAGAT+TGG - Chr3:85620032-85620051 MsG0380016604.01.T01:five_prime_UTR 30.0%
GAAGGAACATTAAGTTTACA+GGG + Chr3:85619534-85619553 None:intergenic 30.0%
GACATAAAACCGTTAATTCA+GGG + Chr3:85615104-85615123 None:intergenic 30.0%
GATTATTTCCCTTAAATGGT+AGG + Chr3:85617552-85617571 None:intergenic 30.0%
GGATGATTATTTCCCTTAAA+TGG + Chr3:85617556-85617575 None:intergenic 30.0%
GTAAAAACTAACTATCAAGG+GGG - Chr3:85616052-85616071 MsG0380016604.01.T01:intron 30.0%
GTAGATCTGCAATCAAATAT+CGG - Chr3:85616743-85616762 MsG0380016604.01.T01:intron 30.0%
GTTAAAGAATTGGATTGAGA+TGG + Chr3:85618994-85619013 None:intergenic 30.0%
TAACAAATCCCTACCATTTA+AGG - Chr3:85617540-85617559 MsG0380016604.01.T01:CDS 30.0%
TAGATCTGCAATCAAATATC+GGG - Chr3:85616744-85616763 MsG0380016604.01.T01:intron 30.0%
TCAAAAGCTAGAACTTGAAA+GGG - Chr3:85618248-85618267 MsG0380016604.01.T01:intron 30.0%
TCACTTTGATCTTATGTCAA+TGG - Chr3:85613470-85613489 MsG0380016604.01.T01:three_prime_UTR 30.0%
TCCCTTAGTATAATACTGAT+TGG - Chr3:85619184-85619203 MsG0380016604.01.T01:CDS 30.0%
TCGTAAAGTGAGAAATTTGA+AGG + Chr3:85613450-85613469 None:intergenic 30.0%
TCTAAGAAGAAAAATTACCC+TGG + Chr3:85615240-85615259 None:intergenic 30.0%
TCTTCATATGACATATGTGA+TGG - Chr3:85617578-85617597 MsG0380016604.01.T01:intron 30.0%
TGAAGGAACATTAAGTTTAC+AGG + Chr3:85619535-85619554 None:intergenic 30.0%
TGATAATTAGTAACCAGTGA+AGG + Chr3:85614059-85614078 None:intergenic 30.0%
TGCTTTGTAATGGTAAAGAT+GGG - Chr3:85618366-85618385 MsG0380016604.01.T01:intron 30.0%
TGTAAATATATATCTCTGGG+CGG + Chr3:85619674-85619693 None:intergenic 30.0%
TGTTTCGAATCAAACAATAC+TGG + Chr3:85616703-85616722 None:intergenic 30.0%
TTACAACTACTGCTTTGTAA+TGG - Chr3:85618356-85618375 MsG0380016604.01.T01:intron 30.0%
TTCAAAAGCTAGAACTTGAA+AGG - Chr3:85618247-85618266 MsG0380016604.01.T01:intron 30.0%
TTGAGCTAATTAACCATGTA+TGG - Chr3:85614722-85614741 MsG0380016604.01.T01:intron 30.0%
TTGATACAAACATATACCAG+AGG + Chr3:85617283-85617302 None:intergenic 30.0%
TTTGAACTTAGAATCTTGCT+TGG - Chr3:85615427-85615446 MsG0380016604.01.T01:intron 30.0%
! ATACTGATTGGAAATTTGGA+AGG - Chr3:85619196-85619215 MsG0380016604.01.T01:CDS 30.0%
! ATAGTGTTTCAGTTTTGCTT+TGG + Chr3:85618282-85618301 None:intergenic 30.0%
! ATATGATGGTGAATTCACTT+TGG - Chr3:85617738-85617757 MsG0380016604.01.T01:CDS 30.0%
! ATTTGTTGATCCAACCTTAT+GGG + Chr3:85619492-85619511 None:intergenic 30.0%
! ATTTTTATCCCATACTAGTC+CGG - Chr3:85615855-85615874 MsG0380016604.01.T01:intron 30.0%
! CAAGATCCGTAATTTTCTAA+TGG - Chr3:85616721-85616740 MsG0380016604.01.T01:intron 30.0%
! CAATGGATTTGATGAAGATT+TGG - Chr3:85616851-85616870 MsG0380016604.01.T01:intron 30.0%
! CTTAGCTTCATTAGTTTCTA+GGG - Chr3:85618056-85618075 MsG0380016604.01.T01:intron 30.0%
! GTTGTTGTTGTGATTATTCT+GGG + Chr3:85618309-85618328 None:intergenic 30.0%
! TAATGGACAGATTAACAGAA+GGG - Chr3:85614193-85614212 MsG0380016604.01.T01:intron 30.0%
! TCACTGGTTACTAATTATCA+TGG - Chr3:85614059-85614078 MsG0380016604.01.T01:intron 30.0%
! TCTTAGCTTCATTAGTTTCT+AGG - Chr3:85618055-85618074 MsG0380016604.01.T01:intron 30.0%
! TGAGACATATTCCGTTATTT+TGG - Chr3:85615649-85615668 MsG0380016604.01.T01:intron 30.0%
! TGTTGTTGTTGTGATTATTC+TGG + Chr3:85618310-85618329 None:intergenic 30.0%
! TTAGCTTCATTAGTTTCTAG+GGG - Chr3:85618057-85618076 MsG0380016604.01.T01:intron 30.0%
! TTTCCTTTTCTTAATGATGG+TGG - Chr3:85614910-85614929 MsG0380016604.01.T01:intron 30.0%
! TTTTAGATACAATACAACCC+AGG - Chr3:85613498-85613517 MsG0380016604.01.T01:three_prime_UTR 30.0%
!! AATTTGTTGATCCAACCTTA+TGG + Chr3:85619493-85619512 None:intergenic 30.0%
!! ATAATGGACAGATTAACAGA+AGG - Chr3:85614192-85614211 MsG0380016604.01.T01:intron 30.0%
!! ATGTGTTTAACTTGTAGAGT+TGG - Chr3:85619811-85619830 MsG0380016604.01.T01:five_prime_UTR 30.0%
!! ATTTGTTATTTCCAAGAGTG+GGG + Chr3:85617528-85617547 None:intergenic 30.0%
!! ATTTGTTTTTCCGTCTCAAT+AGG - Chr3:85619335-85619354 MsG0380016604.01.T01:CDS 30.0%
!! GATGTATTTTTGCCAAATCT+TGG - Chr3:85617647-85617666 MsG0380016604.01.T01:intron 30.0%
!! GATTTGTTATTTCCAAGAGT+GGG + Chr3:85617529-85617548 None:intergenic 30.0%
!! TAGTTTTTAGAGAGGACTTT+TGG - Chr3:85618476-85618495 MsG0380016604.01.T01:intron 30.0%
!! TGTATTTTTGCCAAATCTTG+GGG - Chr3:85617649-85617668 MsG0380016604.01.T01:intron 30.0%
!! TTGGATTGTAGTTTTTAGAG+AGG - Chr3:85618468-85618487 MsG0380016604.01.T01:intron 30.0%
!!! AGCTTGTGCTATTTTCATAT+AGG - Chr3:85616954-85616973 MsG0380016604.01.T01:intron 30.0%
!!! CCCTTTTGAGTTTTTTTAAG+CGG + Chr3:85616483-85616502 None:intergenic 30.0%
!!! TAGTTTTGCCCCTATTTTTT+GGG - Chr3:85617474-85617493 MsG0380016604.01.T01:intron 30.0%
!!! TATATGTTTTAAGGTACCTG+TGG - Chr3:85619716-85619735 MsG0380016604.01.T01:intron 30.0%
!!! TATCGTTTTGAGGTTCTTTA+AGG - Chr3:85619835-85619854 MsG0380016604.01.T01:five_prime_UTR 30.0%
!!! TGTTCTAGTTTTGATGTGTT+GGG + Chr3:85613335-85613354 None:intergenic 30.0%
!!! TTAGTTTTGCCCCTATTTTT+TGG - Chr3:85617473-85617492 MsG0380016604.01.T01:intron 30.0%
!!! TTGCACGTGTATTGATTTTA+AGG - Chr3:85614488-85614507 MsG0380016604.01.T01:intron 30.0%
!!! TTGTTCTAGTTTTGATGTGT+TGG + Chr3:85613336-85613355 None:intergenic 30.0%
AAAATATAGCCGTTTCTACC+TGG + Chr3:85614581-85614600 None:intergenic 35.0%
AAATGGTAACCATGGTTTCA+TGG - Chr3:85613878-85613897 MsG0380016604.01.T01:intron 35.0%
AACTAATGAACCCCAAGATT+TGG + Chr3:85617662-85617681 None:intergenic 35.0%
AAGTTCTGTATCTTCGTCAA+TGG - Chr3:85616834-85616853 MsG0380016604.01.T01:intron 35.0%
ACCAATCTATGACCATAATG+TGG - Chr3:85617366-85617385 MsG0380016604.01.T01:intron 35.0%
ACCACATTATGGTCATAGAT+TGG + Chr3:85617370-85617389 None:intergenic 35.0%
AGAAGACAACGAAAAAGAAG+TGG + Chr3:85617928-85617947 None:intergenic 35.0%
AGAAGAGAGAAGGGTTAAAA+GGG + Chr3:85613416-85613435 None:intergenic 35.0%
AGAATCAGCATTTGGTTGAT+GGG - Chr3:85613937-85613956 MsG0380016604.01.T01:intron 35.0%
AGCCATACCATACATAACAT+AGG - Chr3:85613264-85613283 MsG0380016604.01.T01:three_prime_UTR 35.0%
AGGTTGAAATAATCGCACAA+AGG + Chr3:85617332-85617351 None:intergenic 35.0%
ATACTCCCAAAGAAGAATGA+GGG + Chr3:85616521-85616540 None:intergenic 35.0%
ATGAAACCATGGTTACCATT+TGG + Chr3:85613879-85613898 None:intergenic 35.0%
ATGTTCTTGCATAGGAAGTT+CGG - Chr3:85617030-85617049 MsG0380016604.01.T01:intron 35.0%
ATTGAGATTGAGAGATGCAT+TGG - Chr3:85618449-85618468 MsG0380016604.01.T01:intron 35.0%
CAAATAGTAGCCTATTGAGA+CGG + Chr3:85619320-85619339 None:intergenic 35.0%
CAATGGATAATATCCAAGCA+TGG + Chr3:85615165-85615184 None:intergenic 35.0%
CACATATGTCATATGAAGAG+TGG + Chr3:85617577-85617596 None:intergenic 35.0%
CACCTATGTTATGTATGGTA+TGG + Chr3:85613269-85613288 None:intergenic 35.0%
CACTTCTTTGAATCTATCTG+TGG - Chr3:85615559-85615578 MsG0380016604.01.T01:intron 35.0%
CATTCATCCTAGAAACATGA+AGG + Chr3:85619650-85619669 None:intergenic 35.0%
CGTACTTCCCTATTAAACAT+TGG - Chr3:85616457-85616476 MsG0380016604.01.T01:intron 35.0%
CTATAACAACACAAACGACA+AGG + Chr3:85614890-85614909 None:intergenic 35.0%
CTGCTTTGTAATGGTAAAGA+TGG - Chr3:85618365-85618384 MsG0380016604.01.T01:intron 35.0%
GAAATACAGCATCGTTAGAA+AGG + Chr3:85615332-85615351 None:intergenic 35.0%
GAAGAAAATGCAACCAGATT+GGG + Chr3:85617896-85617915 None:intergenic 35.0%
GAAGACAACGAAAAAGAAGT+GGG + Chr3:85617927-85617946 None:intergenic 35.0%
GAATCATCCTTCATGTTTCT+AGG - Chr3:85619640-85619659 MsG0380016604.01.T01:five_prime_UTR 35.0%
GACCATAATGTGGTGAAAAT+AGG - Chr3:85617376-85617395 MsG0380016604.01.T01:intron 35.0%
GAGTGCACATGAAAAGATAT+AGG + Chr3:85617231-85617250 None:intergenic 35.0%
GCATTTCATATTGCTGAATG+CGG - Chr3:85616106-85616125 MsG0380016604.01.T01:intron 35.0%
GCCGCTTAAAAAAACTCAAA+AGG - Chr3:85616479-85616498 MsG0380016604.01.T01:intron 35.0%
GCTAATGCTACTGCTAATAA+TGG - Chr3:85614176-85614195 MsG0380016604.01.T01:intron 35.0%
GCTTTGTAATGGTAAAGATG+GGG - Chr3:85618367-85618386 MsG0380016604.01.T01:intron 35.0%
GGCAAAAAAGTTGGATTAAC+AGG + Chr3:85615218-85615237 None:intergenic 35.0%
GTACCAACAAATAGAGACTT+AGG + Chr3:85616418-85616437 None:intergenic 35.0%
GTTGTCAAAACTGAATCCTA+TGG - Chr3:85614016-85614035 MsG0380016604.01.T01:intron 35.0%
TAAGCGGCCAATGTTTAATA+GGG + Chr3:85616467-85616486 None:intergenic 35.0%
TAATTAGTAACCAGTGAAGG+TGG + Chr3:85614056-85614075 None:intergenic 35.0%
TACCAAAAAGCCACATAAAC+CGG + Chr3:85615877-85615896 None:intergenic 35.0%
TAGTGAACTTGGGTATTATG+AGG + Chr3:85616141-85616160 None:intergenic 35.0%
TTAAGCGGCCAATGTTTAAT+AGG + Chr3:85616468-85616487 None:intergenic 35.0%
TTCATCTACATTGAAGCCAT+AGG - Chr3:85616800-85616819 MsG0380016604.01.T01:intron 35.0%
TTCGTTGAGTTTACTGATGA+AGG - Chr3:85615022-85615041 MsG0380016604.01.T01:intron 35.0%
TTCTTAGAGATTCCTATTGC+AGG - Chr3:85615252-85615271 MsG0380016604.01.T01:intron 35.0%
TTGTGGCTATTCATTGAACT+GGG - Chr3:85615588-85615607 MsG0380016604.01.T01:intron 35.0%
TTGTTGAGAAGTGATTATGG+CGG - Chr3:85613671-85613690 MsG0380016604.01.T01:exon 35.0%
TTTACTAGAGAAATGCACAG+AGG + Chr3:85616673-85616692 None:intergenic 35.0%
TTTCAACCTTTCTGCAAAAC+TGG - Chr3:85617343-85617362 MsG0380016604.01.T01:intron 35.0%
TTTGTGGCTATTCATTGAAC+TGG - Chr3:85615587-85615606 MsG0380016604.01.T01:intron 35.0%
! AGATACCATACTGCAAGTTT+TGG + Chr3:85619762-85619781 None:intergenic 35.0%
! AGCCTATTTTCACCACATTA+TGG + Chr3:85617381-85617400 None:intergenic 35.0%
! ATCCTCCTGTATTCTTCTTT+TGG - Chr3:85616578-85616597 MsG0380016604.01.T01:intron 35.0%
! CGTTTGTTGAGAAGTGATTA+TGG - Chr3:85613668-85613687 MsG0380016604.01.T01:exon 35.0%
! GGTCATATGGGTTAAAGAAT+TGG + Chr3:85619004-85619023 None:intergenic 35.0%
! GTGCTTATCAAATGGTGTTA+TGG + Chr3:85616285-85616304 None:intergenic 35.0%
! TAGAGTTGGATATCGTTTTG+AGG - Chr3:85619825-85619844 MsG0380016604.01.T01:five_prime_UTR 35.0%
! TGTTTTGTAGAACCTGCAAT+AGG + Chr3:85615267-85615286 None:intergenic 35.0%
! TTGTGATGATGTTCTTGCAT+AGG - Chr3:85617022-85617041 MsG0380016604.01.T01:intron 35.0%
!! AACGGTTTTATGTCTACAGT+TGG - Chr3:85615110-85615129 MsG0380016604.01.T01:intron 35.0%
!! ACATATGTGATGGTGACTTT+TGG - Chr3:85617588-85617607 MsG0380016604.01.T01:intron 35.0%
!! ATCTTGGGGTTCATTAGTTT+TGG - Chr3:85617663-85617682 MsG0380016604.01.T01:intron 35.0%
!! CATATGTGATGGTGACTTTT+GGG - Chr3:85617589-85617608 MsG0380016604.01.T01:intron 35.0%
!! CTTCATGTTTCTAGGATGAA+TGG - Chr3:85619648-85619667 MsG0380016604.01.T01:five_prime_UTR 35.0%
!! CTTTAAGGCTTAAGTTATGC+TGG - Chr3:85619850-85619869 MsG0380016604.01.T01:five_prime_UTR 35.0%
!! GGATTTGTTATTTCCAAGAG+TGG + Chr3:85617530-85617549 None:intergenic 35.0%
!! GGTATCTTTTGTTTCTCGTT+GGG - Chr3:85619775-85619794 MsG0380016604.01.T01:intron 35.0%
!! GTATCTTTTGTTTCTCGTTG+GGG - Chr3:85619776-85619795 MsG0380016604.01.T01:intron 35.0%
!! TATTTTTGCCTCATTCTTGC+AGG - Chr3:85619413-85619432 MsG0380016604.01.T01:CDS 35.0%
!! TGGTATCTTTTGTTTCTCGT+TGG - Chr3:85619774-85619793 MsG0380016604.01.T01:intron 35.0%
!! TTATATATGGATTGGTCGGT+CGG - Chr3:85618917-85618936 MsG0380016604.01.T01:CDS 35.0%
!! TTCAGATTCTGATCGGTTTT+GGG + Chr3:85613795-85613814 None:intergenic 35.0%
!! TTTTGATGGGTGGATTCAAA+TGG - Chr3:85618213-85618232 MsG0380016604.01.T01:intron 35.0%
!!! ATAGCTCTAGCTAGCTTTTA+AGG + Chr3:85616329-85616348 None:intergenic 35.0%
!!! TAATCCAACTTTTTTGCCCA+GGG - Chr3:85615220-85615239 MsG0380016604.01.T01:intron 35.0%
!!! TAGCTCTAGCTAGCTTTTAA+GGG + Chr3:85616328-85616347 None:intergenic 35.0%
!!! TTAATCCAACTTTTTTGCCC+AGG - Chr3:85615219-85615238 MsG0380016604.01.T01:intron 35.0%
!!! TTAATCGGTGTGGTTTTGAT+GGG - Chr3:85618200-85618219 MsG0380016604.01.T01:intron 35.0%
!!! TTCTTATGTTTTGGCATGCA+GGG - Chr3:85619563-85619582 MsG0380016604.01.T01:CDS 35.0%
!!! TTTAATCGGTGTGGTTTTGA+TGG - Chr3:85618199-85618218 MsG0380016604.01.T01:intron 35.0%
AAAACTGAATCCTATGGCTG+AGG - Chr3:85614022-85614041 MsG0380016604.01.T01:intron 40.0%
AAAGCTAGCTAGAGCTATCA+AGG - Chr3:85616331-85616350 MsG0380016604.01.T01:intron 40.0%
AACGAAAAAGAAGTGGGAGA+CGG + Chr3:85617921-85617940 None:intergenic 40.0%
AACGAATGCAAACCGAAGAA+TGG + Chr3:85615008-85615027 None:intergenic 40.0%
AACTACTCTTACGTGAGCAT+AGG - Chr3:85614949-85614968 MsG0380016604.01.T01:intron 40.0%
AAGAGAGAGAGAAGAGAGAA+GGG + Chr3:85613425-85613444 None:intergenic 40.0%
AAGCTAGCTAGAGCTATCAA+GGG - Chr3:85616332-85616351 MsG0380016604.01.T01:intron 40.0%
AAGGTGAAGAGAAGAACAAG+AGG - Chr3:85618424-85618443 MsG0380016604.01.T01:intron 40.0%
AAGGTTGGGTCAACAACAAA+AGG + Chr3:85617863-85617882 None:intergenic 40.0%
AATAGGCTGTGAATCTGTGA+TGG - Chr3:85617393-85617412 MsG0380016604.01.T01:intron 40.0%
AATAGTTAACGGAGCATGTG+AGG + Chr3:85617131-85617150 None:intergenic 40.0%
ACAAATCTCGACAAGAAGGT+AGG - Chr3:85615398-85615417 MsG0380016604.01.T01:intron 40.0%
ACAGGAGGTTGAAATAGACA+AGG - Chr3:85618405-85618424 MsG0380016604.01.T01:intron 40.0%
ACCCAAGTTCACTAAGTACT+TGG - Chr3:85616147-85616166 MsG0380016604.01.T01:intron 40.0%
ACTGTTGTCCAAATTCTCAC+TGG + Chr3:85613730-85613749 None:intergenic 40.0%
AGAATGGTTCTCAAGTGCTA+GGG + Chr3:85616032-85616051 None:intergenic 40.0%
AGACACGACATCTTATTGTG+TGG + Chr3:85618003-85618022 None:intergenic 40.0%
AGAGTTTCAAGCGTGAAATG+AGG - Chr3:85613979-85613998 MsG0380016604.01.T01:intron 40.0%
AGCAAGCTACACCTTATCTT+AGG - Chr3:85616609-85616628 MsG0380016604.01.T01:intron 40.0%
AGGTCGGTTAACGGTTTAAT+CGG - Chr3:85618185-85618204 MsG0380016604.01.T01:intron 40.0%
AGTGTTCCAAATGGTAACCA+TGG - Chr3:85613870-85613889 MsG0380016604.01.T01:intron 40.0%
ATAGTTAACGGAGCATGTGA+GGG + Chr3:85617130-85617149 None:intergenic 40.0%
ATATTGCTGAATGCGGACTT+AGG - Chr3:85616113-85616132 MsG0380016604.01.T01:intron 40.0%
ATCCTCCCTCATTCTTCTTT+GGG - Chr3:85616513-85616532 MsG0380016604.01.T01:intron 40.0%
ATGAAGGATGATTCAGTGCA+TGG + Chr3:85619634-85619653 None:intergenic 40.0%
ATGTGATAGAGCTCCATACA+TGG + Chr3:85614738-85614757 None:intergenic 40.0%
ATTACCCTGGGCAAAAAAGT+TGG + Chr3:85615227-85615246 None:intergenic 40.0%
ATTGATCACACCAACAACGT+TGG + Chr3:85613835-85613854 None:intergenic 40.0%
ATTGATTGGAGCTCCATACA+TGG + Chr3:85614832-85614851 None:intergenic 40.0%
ATTTGGATGCAAGGGGATTA+GGG + Chr3:85617793-85617812 None:intergenic 40.0%
CAACAAGACAGTGTTCCAAA+TGG - Chr3:85613861-85613880 MsG0380016604.01.T01:CDS 40.0%
CAACACAAACGACAAGGTAA+CGG + Chr3:85614884-85614903 None:intergenic 40.0%
CAGAATCAGCATTTGGTTGA+TGG - Chr3:85613936-85613955 MsG0380016604.01.T01:intron 40.0%
CAGCAATATGAAATGCTTGG+CGG + Chr3:85616102-85616121 None:intergenic 40.0%
CATACTCCCAAAGAAGAATG+AGG + Chr3:85616522-85616541 None:intergenic 40.0%
CCCAAGTACTTAGTGAACTT+GGG + Chr3:85616151-85616170 None:intergenic 40.0%
CCCAAGTTCACTAAGTACTT+GGG - Chr3:85616148-85616167 MsG0380016604.01.T01:intron 40.0%
CGATTCTTCCAGTGAGAATT+TGG - Chr3:85613719-85613738 MsG0380016604.01.T01:intron 40.0%
CTCAGAATCGACCTAAAACA+CGG + Chr3:85616982-85617001 None:intergenic 40.0%
CTCCAAAAGAAGAATACAGG+AGG + Chr3:85616583-85616602 None:intergenic 40.0%
CTGATTGGAAATTTGGAAGG+TGG - Chr3:85619199-85619218 MsG0380016604.01.T01:CDS 40.0%
GAACTTAGAATCTTGCTTGG+AGG - Chr3:85615430-85615449 MsG0380016604.01.T01:intron 40.0%
GAAGTTGAAACTAATAGGGC+TGG + Chr3:85619106-85619125 None:intergenic 40.0%
GACACGACATCTTATTGTGT+GGG + Chr3:85618002-85618021 None:intergenic 40.0%
GAGAAGAGAGAAGGGTTAAA+AGG + Chr3:85613417-85613436 None:intergenic 40.0%
GAGTTTCAAGCGTGAAATGA+GGG - Chr3:85613980-85613999 MsG0380016604.01.T01:intron 40.0%
GATAAGCACCTTTGCACTTT+GGG - Chr3:85616296-85616315 MsG0380016604.01.T01:intron 40.0%
GCAAACCGAAGAATGGAATT+GGG + Chr3:85615001-85615020 None:intergenic 40.0%
GCAAGAAAAAAGGATGAGTG+AGG + Chr3:85616219-85616238 None:intergenic 40.0%
GCAAGCTACACCTTATCTTA+GGG - Chr3:85616610-85616629 MsG0380016604.01.T01:intron 40.0%
GGAAGAAAATGCAACCAGAT+TGG + Chr3:85617897-85617916 None:intergenic 40.0%
GGGATTACCATCATTCAACT+CGG - Chr3:85615778-85615797 MsG0380016604.01.T01:intron 40.0%
GGTCCACCATCATTAAGAAA+AGG + Chr3:85614916-85614935 None:intergenic 40.0%
GGTTGGATGTTTGTAACATC+CGG - Chr3:85619899-85619918 MsG0380016604.01.T01:five_prime_UTR 40.0%
GGTTTCATGGCTCATCAAAT+GGG - Chr3:85613891-85613910 MsG0380016604.01.T01:intron 40.0%
GTAAAGAATTGAGATGGGAC+AGG - Chr3:85618821-85618840 MsG0380016604.01.T01:intron 40.0%
TAACGGAACACGTGTATCTA+AGG + Chr3:85614867-85614886 None:intergenic 40.0%
TACAGGGCAGATGAAATGAA+AGG + Chr3:85619518-85619537 None:intergenic 40.0%
TACTACTCGATGTGGAACTT+AGG - Chr3:85616380-85616399 MsG0380016604.01.T01:intron 40.0%
TATTTGGATGCAAGGGGATT+AGG + Chr3:85617794-85617813 None:intergenic 40.0%
TCTGACATTGATCAACAGGT+AGG - Chr3:85614416-85614435 MsG0380016604.01.T01:intron 40.0%
TGAAAATAGCACAAGCTTGC+TGG + Chr3:85616951-85616970 None:intergenic 40.0%
TGAAGGATGATTCAGTGCAT+GGG + Chr3:85619633-85619652 None:intergenic 40.0%
TGATAAGCACCTTTGCACTT+TGG - Chr3:85616295-85616314 MsG0380016604.01.T01:intron 40.0%
TGATTGATGTTGTGTTGCAG+AGG - Chr3:85614303-85614322 MsG0380016604.01.T01:intron 40.0%
TGCAAACCGAAGAATGGAAT+TGG + Chr3:85615002-85615021 None:intergenic 40.0%
TGGCTTCAATGTAGATGAAG+AGG + Chr3:85616799-85616818 None:intergenic 40.0%
TGGTTTCATGGCTCATCAAA+TGG - Chr3:85613890-85613909 MsG0380016604.01.T01:intron 40.0%
TGTGTCTGACATTGATCAAC+AGG - Chr3:85614412-85614431 MsG0380016604.01.T01:intron 40.0%
TGTTCTTGCATAGGAAGTTC+GGG - Chr3:85617031-85617050 MsG0380016604.01.T01:intron 40.0%
TGTTGCCAAAACTTGCAGTA+TGG - Chr3:85619754-85619773 MsG0380016604.01.T01:intron 40.0%
TTCATGTGCACTCTCCTAAT+AGG - Chr3:85617238-85617257 MsG0380016604.01.T01:intron 40.0%
TTGCACAAATCTCGACAAGA+AGG - Chr3:85615394-85615413 MsG0380016604.01.T01:intron 40.0%
TTGGCGTTTCCCTGAATTAA+CGG - Chr3:85615092-85615111 MsG0380016604.01.T01:intron 40.0%
TTTGATGAGCCATGAAACCA+TGG + Chr3:85613890-85613909 None:intergenic 40.0%
! AAAGAGAAGAGATGATTCGG+AGG - Chr3:85614381-85614400 MsG0380016604.01.T01:intron 40.0%
! AAATGCTTGGCGGAGTATTT+AGG + Chr3:85616092-85616111 None:intergenic 40.0%
! AAGCAATCCGAGTTGAATGA+TGG + Chr3:85615788-85615807 None:intergenic 40.0%
! ATTGGTCCAGTTTTGCAGAA+AGG + Chr3:85617352-85617371 None:intergenic 40.0%
! GAGTAGTTGACTTAGTAACG+TGG + Chr3:85614937-85614956 None:intergenic 40.0%
! GCAAGCTACACCTTTTCAAA+AGG - Chr3:85616545-85616564 MsG0380016604.01.T01:intron 40.0%
! GCGAAGAGTGTATCATAAGA+TGG - Chr3:85614349-85614368 MsG0380016604.01.T01:intron 40.0%
! TCATATAGGAGCCGTGTTTT+AGG - Chr3:85616968-85616987 MsG0380016604.01.T01:intron 40.0%
! TGTGAAAGTGATGACGATGA+AGG + Chr3:85613311-85613330 None:intergenic 40.0%
! TTATGTCTACAGTTGGTGCT+AGG - Chr3:85615117-85615136 MsG0380016604.01.T01:intron 40.0%
!! ACCAACAACGTTGGTGTTAA+CGG + Chr3:85613826-85613845 None:intergenic 40.0%
!! ATTTGGTTGATGGGTATGGT+GGG - Chr3:85613946-85613965 MsG0380016604.01.T01:intron 40.0%
!! CACATAAACCGGACTAGTAT+GGG + Chr3:85615866-85615885 None:intergenic 40.0%
!! CTCACTGGAAGAATCGATTT+TGG + Chr3:85613715-85613734 None:intergenic 40.0%
!! CTTAGCAGCTCCTTTTGAAA+AGG + Chr3:85616558-85616577 None:intergenic 40.0%
!! GGACAACAGTGTTGTTTCAT+CGG - Chr3:85613740-85613759 MsG0380016604.01.T01:intron 40.0%
!! GTGCAAAGGTGCTTATCAAA+TGG + Chr3:85616293-85616312 None:intergenic 40.0%
!! GTTCAGATTCTGATCGGTTT+TGG + Chr3:85613796-85613815 None:intergenic 40.0%
!! TATGTCTACAGTTGGTGCTA+GGG - Chr3:85615118-85615137 MsG0380016604.01.T01:intron 40.0%
!! TTCAACTCGGATTGCTTTTG+TGG - Chr3:85615791-85615810 MsG0380016604.01.T01:intron 40.0%
!!! ATTCTGATCGGTTTTGGGTT+TGG + Chr3:85613790-85613809 None:intergenic 40.0%
!!! GTTCTTATGTTTTGGCATGC+AGG - Chr3:85619562-85619581 MsG0380016604.01.T01:CDS 40.0%
!!! TCTAGCTAGCTTTTAAGGGA+GGG + Chr3:85616324-85616343 None:intergenic 40.0%
!!! TTAACGCAGCACTGACTTTT+TGG + Chr3:85613373-85613392 None:intergenic 40.0%
!!! TTTTGGGTTCACTACCCATA+AGG - Chr3:85619475-85619494 MsG0380016604.01.T01:CDS 40.0%
AAGTCTCAACTAAACGCCAC+AGG + Chr3:85619735-85619754 None:intergenic 45.0%
ACCGTTAACACCAACGTTGT+TGG - Chr3:85613822-85613841 MsG0380016604.01.T01:CDS 45.0%
AGCTAGCTAGAGCTATCAAG+GGG - Chr3:85616333-85616352 MsG0380016604.01.T01:intron 45.0%
ATCTCGACAAGAAGGTAGGT+TGG - Chr3:85615402-85615421 MsG0380016604.01.T01:intron 45.0%
ATGGGTCAGATGCATGGAAA+TGG - Chr3:85613909-85613928 MsG0380016604.01.T01:intron 45.0%
CAACGAGAGACTTCTATGGT+TGG - Chr3:85619882-85619901 MsG0380016604.01.T01:five_prime_UTR 45.0%
CAAGCGTGAAATGAGGGATT+TGG - Chr3:85613986-85614005 MsG0380016604.01.T01:intron 45.0%
CAGAATGGTTCTCAAGTGCT+AGG + Chr3:85616033-85616052 None:intergenic 45.0%
CATCAAATGGGTCAGATGCA+TGG - Chr3:85613903-85613922 MsG0380016604.01.T01:intron 45.0%
CCATACTAGTCCGGTTTATG+TGG - Chr3:85615864-85615883 MsG0380016604.01.T01:intron 45.0%
CTGCAATCAAATATCGGGCA+TGG - Chr3:85616749-85616768 MsG0380016604.01.T01:intron 45.0%
CTTTGAATCTATCTGTGGCG+AGG - Chr3:85615564-85615583 MsG0380016604.01.T01:intron 45.0%
GAAGAGAGAGAGAAGAGAGA+AGG + Chr3:85613426-85613445 None:intergenic 45.0%
GACTCAACTGAAGTAAGCCT+AGG + Chr3:85617832-85617851 None:intergenic 45.0%
GATCCTCCCTCATTCTTCTT+TGG - Chr3:85616512-85616531 MsG0380016604.01.T01:intron 45.0%
GCATCTCATACTACTCGATG+TGG - Chr3:85616372-85616391 MsG0380016604.01.T01:intron 45.0%
GCCCAAGTACTTAGTGAACT+TGG + Chr3:85616152-85616171 None:intergenic 45.0%
GCTGGTGTTCAGATTCTGAT+CGG + Chr3:85613802-85613821 None:intergenic 45.0%
GGCTGCGTCTTACTATTGAT+TGG + Chr3:85614846-85614865 None:intergenic 45.0%
GGGATCCCAATTCCATTCTT+CGG - Chr3:85614993-85615012 MsG0380016604.01.T01:intron 45.0%
GGTGCAATAGCAGTCTTTGA+AGG + Chr3:85615197-85615216 None:intergenic 45.0%
GGTTAACGGTTTAATCGGTG+TGG - Chr3:85618190-85618209 MsG0380016604.01.T01:intron 45.0%
GTAGATGAAGAGGCAGTGAA+TGG + Chr3:85616789-85616808 None:intergenic 45.0%
GTTGTGTTGCAGAGGAAGAA+TGG - Chr3:85614311-85614330 MsG0380016604.01.T01:intron 45.0%
TAGTTAACGGAGCATGTGAG+GGG + Chr3:85617129-85617148 None:intergenic 45.0%
TATCATGGCTACTTAGCTGC+TGG - Chr3:85614074-85614093 MsG0380016604.01.T01:intron 45.0%
TCATGTAGGTTCAACGTCTG+AGG - Chr3:85615748-85615767 MsG0380016604.01.T01:intron 45.0%
TCCAATCCGAACAATACCGT+GGG - Chr3:85618120-85618139 MsG0380016604.01.T01:CDS 45.0%
TCTCGACAAGAAGGTAGGTT+GGG - Chr3:85615403-85615422 MsG0380016604.01.T01:intron 45.0%
TCTCTGGTTAGGTCGGTTAA+CGG - Chr3:85618176-85618195 MsG0380016604.01.T01:intron 45.0%
TGAGATGGACAAGAGTGGAT+CGG + Chr3:85618979-85618998 None:intergenic 45.0%
TGATTGTCAGTGCCTCTGAA+AGG + Chr3:85616261-85616280 None:intergenic 45.0%
TGCTCAGTTTGGATCGGTTA+CGG - Chr3:85619071-85619090 MsG0380016604.01.T01:intron 45.0%
TGGATTGAGATGGACAAGAG+TGG + Chr3:85618984-85619003 None:intergenic 45.0%
TGGGGTTCAGAATCAGCATT+TGG - Chr3:85613929-85613948 MsG0380016604.01.T01:intron 45.0%
TGGGTCAGATGCATGGAAAT+GGG - Chr3:85613910-85613929 MsG0380016604.01.T01:intron 45.0%
TGTTTCATCGGACTCAACTG+AGG - Chr3:85613752-85613771 MsG0380016604.01.T01:intron 45.0%
TTTGAAGGCAGCACTCTCAA+TGG + Chr3:85615182-85615201 None:intergenic 45.0%
TTTGGATGCAAGGGGATTAG+GGG + Chr3:85617792-85617811 None:intergenic 45.0%
! AGCTGTAGTGGTGTGGTTTT+GGG - Chr3:85619459-85619478 MsG0380016604.01.T01:CDS 45.0%
! AGTTTCTAGGGGTGGACAAA+CGG - Chr3:85618068-85618087 MsG0380016604.01.T01:intron 45.0%
! ATCGTGACATTGACTGTCAG+GGG + Chr3:85616179-85616198 None:intergenic 45.0%
! CATCGTGACATTGACTGTCA+GGG + Chr3:85616180-85616199 None:intergenic 45.0%
! GATTGTCAGTGCCTCTGAAA+GGG + Chr3:85616260-85616279 None:intergenic 45.0%
! GCTTCATTAGTTTCTAGGGG+TGG - Chr3:85618060-85618079 MsG0380016604.01.T01:intron 45.0%
! GTCCGGTTTATGTGGCTTTT+TGG - Chr3:85615872-85615891 MsG0380016604.01.T01:intron 45.0%
! GTTGTTGATTGCCGAGTATG+CGG - Chr3:85614971-85614990 MsG0380016604.01.T01:intron 45.0%
! TAGAGAGGACTTTTGGACTC+TGG - Chr3:85618483-85618502 MsG0380016604.01.T01:intron 45.0%
! TGCTTTTGTGGAGTTTGCAG+TGG - Chr3:85615803-85615822 MsG0380016604.01.T01:intron 45.0%
! TTCAACGTCTGAGGCTTCTT+GGG - Chr3:85615757-85615776 MsG0380016604.01.T01:intron 45.0%
! TTGATGGGTATGGTGGGAAT+GGG - Chr3:85613952-85613971 MsG0380016604.01.T01:intron 45.0%
! TTGTTGATTGCCGAGTATGC+GGG - Chr3:85614972-85614991 MsG0380016604.01.T01:intron 45.0%
!! CAGCATTTGGTTGATGGGTA+TGG - Chr3:85613942-85613961 MsG0380016604.01.T01:intron 45.0%
!! CATTTGGTTGATGGGTATGG+TGG - Chr3:85613945-85613964 MsG0380016604.01.T01:intron 45.0%
!! CCACATAAACCGGACTAGTA+TGG + Chr3:85615867-85615886 None:intergenic 45.0%
!! TAGGAGATAGCATTGGCTCA+AGG + Chr3:85617212-85617231 None:intergenic 45.0%
!! TATTTTCGGAAGGTGCAGCA+GGG + Chr3:85615981-85616000 None:intergenic 45.0%
!! TTATTTTCGGAAGGTGCAGC+AGG + Chr3:85615982-85616001 None:intergenic 45.0%
!!! CTCTAGCTAGCTTTTAAGGG+AGG + Chr3:85616325-85616344 None:intergenic 45.0%
!!! TTTTTTTTTTTGAAAAAAAT+CGG - Chr3:85613525-85613544 MsG0380016604.01.T01:three_prime_UTR 5.0%
AATCCGAACAATACCGTGGG+TGG - Chr3:85618123-85618142 MsG0380016604.01.T01:CDS 50.0%
AATTGGGATCCCCGCATACT+CGG + Chr3:85614985-85615004 None:intergenic 50.0%
ACCCACGGTATTGTTCGGAT+TGG + Chr3:85618124-85618143 None:intergenic 50.0%
ACTCTCAGCCTGCAAGAATG+AGG + Chr3:85619424-85619443 None:intergenic 50.0%
AGGGGGGAGACAACGAATTA+TGG + Chr3:85617111-85617130 None:intergenic 50.0%
AGTTAACGGAGCATGTGAGG+GGG + Chr3:85617128-85617147 None:intergenic 50.0%
ATCCAAGCATGGTTCCAGAC+AGG + Chr3:85615154-85615173 None:intergenic 50.0%
ATGGCGGTAGCTGAGAATGT+TGG - Chr3:85613687-85613706 MsG0380016604.01.T01:CDS 50.0%
ATTGCTGCACTGAGCTGTAG+TGG - Chr3:85619447-85619466 MsG0380016604.01.T01:CDS 50.0%
CAGATTGGGCAAGCAACTGA+AGG + Chr3:85617882-85617901 None:intergenic 50.0%
CCGATCCAAACTGAGCAATC+CGG + Chr3:85619068-85619087 None:intergenic 50.0%
CCGGATTGCTCAGTTTGGAT+CGG - Chr3:85619065-85619084 MsG0380016604.01.T01:intron 50.0%
CTAGGTTACTGAAGAGCAGC+TGG - Chr3:85614533-85614552 MsG0380016604.01.T01:intron 50.0%
CTCACTGCAAGTGACTATGC+TGG - Chr3:85616904-85616923 MsG0380016604.01.T01:intron 50.0%
CTCCAATCCGAACAATACCG+TGG - Chr3:85618119-85618138 MsG0380016604.01.T01:CDS 50.0%
CTCCCAAAGAAGAATGAGGG+AGG + Chr3:85616518-85616537 None:intergenic 50.0%
CTCGCAACGAGAGACTTCTA+TGG - Chr3:85619878-85619897 MsG0380016604.01.T01:five_prime_UTR 50.0%
CTGAAAGGGCTTACAACGGA+GGG + Chr3:85616246-85616265 None:intergenic 50.0%
CTTCAGTTGCTTGCCCAATC+TGG - Chr3:85617880-85617899 MsG0380016604.01.T01:intron 50.0%
GAAAAAGAAGTGGGAGACGG+AGG + Chr3:85617918-85617937 None:intergenic 50.0%
GACCTAACCAGAGACACCTA+CGG + Chr3:85618170-85618189 None:intergenic 50.0%
GAGGCAGTGAATGGAAAGCA+AGG + Chr3:85616780-85616799 None:intergenic 50.0%
GCATAGTCACTTGCAGTGAG+TGG + Chr3:85616904-85616923 None:intergenic 50.0%
GCGGCTCTCTTTCTTAACTG+CGG - Chr3:85614555-85614574 MsG0380016604.01.T01:intron 50.0%
GCGTGAAATGAGGGATTTGG+AGG - Chr3:85613989-85614008 MsG0380016604.01.T01:intron 50.0%
GGAATTTGTGCCACCTTCAC+TGG - Chr3:85614043-85614062 MsG0380016604.01.T01:intron 50.0%
GGCACAAATTCCTCAGCCAT+AGG + Chr3:85614035-85614054 None:intergenic 50.0%
GGGGGGAGACAACGAATTAT+GGG + Chr3:85617110-85617129 None:intergenic 50.0%
GGGTAACCAAACCCAGCATT+AGG + Chr3:85614101-85614120 None:intergenic 50.0%
GGGTCAGATGCATGGAAATG+GGG - Chr3:85613911-85613930 MsG0380016604.01.T01:intron 50.0%
GGGTTCACTACCCATAAGGT+TGG - Chr3:85619479-85619498 MsG0380016604.01.T01:CDS 50.0%
GTAGGTGTCTCTGGTTAGGT+CGG - Chr3:85618169-85618188 MsG0380016604.01.T01:CDS 50.0%
TAACCAGAGACACCTACGGA+CGG + Chr3:85618166-85618185 None:intergenic 50.0%
TAACTGCGGCCAGGTAGAAA+CGG - Chr3:85614569-85614588 MsG0380016604.01.T01:intron 50.0%
TAGCTGCTGGACCTAATGCT+GGG - Chr3:85614087-85614106 MsG0380016604.01.T01:intron 50.0%
TCCGTTGTAAGCCCTTTCAG+AGG - Chr3:85616246-85616265 MsG0380016604.01.T01:intron 50.0%
TCTATCTGTGGCGAGGTTTG+TGG - Chr3:85615571-85615590 MsG0380016604.01.T01:intron 50.0%
TCTCTTTCTTAACTGCGGCC+AGG - Chr3:85614560-85614579 MsG0380016604.01.T01:intron 50.0%
TCTGAAAGGGCTTACAACGG+AGG + Chr3:85616247-85616266 None:intergenic 50.0%
TCTTGCATAGGAAGTTCGGG+AGG - Chr3:85617034-85617053 MsG0380016604.01.T01:intron 50.0%
TCTTTAGGTAGCCCCACTCT+TGG - Chr3:85617514-85617533 MsG0380016604.01.T01:CDS 50.0%
TGAAAGGGCTTACAACGGAG+GGG + Chr3:85616245-85616264 None:intergenic 50.0%
TGGACAAGAGTGGATCGGTT+CGG + Chr3:85618974-85618993 None:intergenic 50.0%
TGGGCAAGCAACTGAAGGTT+GGG + Chr3:85617877-85617896 None:intergenic 50.0%
TTAGCTGCTGGACCTAATGC+TGG - Chr3:85614086-85614105 MsG0380016604.01.T01:intron 50.0%
TTGGGCAAGCAACTGAAGGT+TGG + Chr3:85617878-85617897 None:intergenic 50.0%
! AACCTGTCTGGAACCATGCT+TGG - Chr3:85615149-85615168 MsG0380016604.01.T01:intron 50.0%
! GAGCTGTAGTGGTGTGGTTT+TGG - Chr3:85619458-85619477 MsG0380016604.01.T01:CDS 50.0%
! GCATCGTGACATTGACTGTC+AGG + Chr3:85616181-85616200 None:intergenic 50.0%
! GCCTCTGAAAGGGCTTACAA+CGG + Chr3:85616250-85616269 None:intergenic 50.0%
! GTTCAACGTCTGAGGCTTCT+TGG - Chr3:85615756-85615775 MsG0380016604.01.T01:intron 50.0%
! GTTCTTGTTTGCAAGCCCAG+TGG + Chr3:85618952-85618971 None:intergenic 50.0%
! GTTGATGGGTATGGTGGGAA+TGG - Chr3:85613951-85613970 MsG0380016604.01.T01:intron 50.0%
! TCAACGTCTGAGGCTTCTTG+GGG - Chr3:85615758-85615777 MsG0380016604.01.T01:intron 50.0%
! TGATGGGTATGGTGGGAATG+GGG - Chr3:85613953-85613972 MsG0380016604.01.T01:intron 50.0%
! TGTTGATTGCCGAGTATGCG+GGG - Chr3:85614973-85614992 MsG0380016604.01.T01:intron 50.0%
!! AACGTTGGTGTTAACGGTGC+TGG + Chr3:85613820-85613839 None:intergenic 50.0%
!! ATTTTCGGAAGGTGCAGCAG+GGG + Chr3:85615980-85615999 None:intergenic 50.0%
!!! ATCGGTGTGGTTTTGATGGG+TGG - Chr3:85618203-85618222 MsG0380016604.01.T01:intron 50.0%
AACCAGAGACACCTACGGAC+GGG + Chr3:85618165-85618184 None:intergenic 55.0%
AAGCGCTTGTGAGAGACAGG+AGG - Chr3:85618390-85618409 MsG0380016604.01.T01:intron 55.0%
AGACACCTACGGACGGGAAT+GGG + Chr3:85618159-85618178 None:intergenic 55.0%
CAGTGTAAATCGAAGCGGGC+GGG + Chr3:85619043-85619062 None:intergenic 55.0%
CCAGTGTAAATCGAAGCGGG+CGG + Chr3:85619044-85619063 None:intergenic 55.0%
CCTCCACCCACGGTATTGTT+CGG + Chr3:85618129-85618148 None:intergenic 55.0%
CGCCCGCTTCGATTTACACT+GGG - Chr3:85619042-85619061 MsG0380016604.01.T01:intron 55.0%
CGCTTCGATTTACACTGGGC+CGG - Chr3:85619046-85619065 MsG0380016604.01.T01:intron 55.0%
CGGCCCAGTGTAAATCGAAG+CGG + Chr3:85619048-85619067 None:intergenic 55.0%
GAGTACGAACAGCACGAGCT+CGG + Chr3:85619611-85619630 None:intergenic 55.0%
GCTGGACCTAATGCTGGGTT+TGG - Chr3:85614092-85614111 MsG0380016604.01.T01:intron 55.0%
GGAGGGGTCGGCAAGAAAAA+AGG + Chr3:85616229-85616248 None:intergenic 55.0%
GGAGGGTTCCCAAAGTGCAA+AGG + Chr3:85616307-85616326 None:intergenic 55.0%
GGCCCAGTGTAAATCGAAGC+GGG + Chr3:85619047-85619066 None:intergenic 55.0%
GGTTACTGAAGAGCAGCTGG+CGG - Chr3:85614536-85614555 MsG0380016604.01.T01:intron 55.0%
GTCCGTAGGTGTCTCTGGTT+AGG - Chr3:85618165-85618184 MsG0380016604.01.T01:CDS 55.0%
GTTAACGGAGCATGTGAGGG+GGG + Chr3:85617127-85617146 None:intergenic 55.0%
TCTAGGGGTGGACAAACGGT+CGG - Chr3:85618072-85618091 MsG0380016604.01.T01:intron 55.0%
TGCACTGAGCTGTAGTGGTG+TGG - Chr3:85619452-85619471 MsG0380016604.01.T01:CDS 55.0%
! AGGGCTGCTTTGAACCTGTC+TGG - Chr3:85615137-85615156 MsG0380016604.01.T01:intron 55.0%
! GATGGGTATGGTGGGAATGG+GGG - Chr3:85613954-85613973 MsG0380016604.01.T01:intron 55.0%
! GGTCGGCATTGAGTTCCACT+GGG - Chr3:85618934-85618953 MsG0380016604.01.T01:CDS 55.0%
!! AACGGATTGGGCGGGTCATA+TGG + Chr3:85619017-85619036 None:intergenic 55.0%
!! ACGGATTGGGCGGGTCATAT+GGG + Chr3:85619016-85619035 None:intergenic 55.0%
!! GCTCGGACTGGTGTCTTTGA+TGG + Chr3:85619594-85619613 None:intergenic 55.0%
AGGGCTTACAACGGAGGGGT+CGG + Chr3:85616241-85616260 None:intergenic 60.0%
ATCGAAGCGGGCGGGTGAAA+CGG + Chr3:85619035-85619054 None:intergenic 60.0%
CCGAACAATACCGTGGGTGG+AGG - Chr3:85618126-85618145 MsG0380016604.01.T01:CDS 60.0%
CCGCCCGCTTCGATTTACAC+TGG - Chr3:85619041-85619060 MsG0380016604.01.T01:intron 60.0%
CTAGGGGTGGACAAACGGTC+GGG - Chr3:85618073-85618092 MsG0380016604.01.T01:intron 60.0%
CTCAACCCATTCCCGTCCGT+AGG - Chr3:85618151-85618170 MsG0380016604.01.T01:CDS 60.0%
CTGGGCCGGATTGCTCAGTT+TGG - Chr3:85619060-85619079 MsG0380016604.01.T01:intron 60.0%
GAGACACCTACGGACGGGAA+TGG + Chr3:85618160-85618179 None:intergenic 60.0%
GGGTTGAGTTCCTCCACCCA+CGG + Chr3:85618139-85618158 None:intergenic 60.0%
TTCCCGTCCGTAGGTGTCTC+TGG - Chr3:85618160-85618179 MsG0380016604.01.T01:CDS 60.0%
! CGGTCGGCATTGAGTTCCAC+TGG - Chr3:85618933-85618952 MsG0380016604.01.T01:CDS 60.0%
! GAAGGTGCAGCAGGGGAAGT+GGG + Chr3:85615973-85615992 None:intergenic 60.0%
!! ACGGTCGGGTTGGACGGTTT+CGG - Chr3:85618087-85618106 MsG0380016604.01.T01:CDS 60.0%
!! GGACAAACGGTCGGGTTGGA+CGG - Chr3:85618081-85618100 MsG0380016604.01.T01:CDS 60.0%
!! GGGAAGCGCTTGTGAGAGAC+AGG - Chr3:85618387-85618406 MsG0380016604.01.T01:intron 60.0%
AGCGGGCGGGTGAAACGGAT+TGG + Chr3:85619030-85619049 None:intergenic 65.0%
CGAACAGCACGAGCTCGGAC+TGG + Chr3:85619606-85619625 None:intergenic 65.0%
GGGTGGACAAACGGTCGGGT+TGG - Chr3:85618077-85618096 MsG0380016604.01.T01:CDS 65.0%
! ATGGCAGGTGGCTCTGCCTC+TGG - Chr3:85617264-85617283 MsG0380016604.01.T01:intron 65.0%
! GCGGGCGGGTGAAACGGATT+GGG + Chr3:85619029-85619048 None:intergenic 65.0%
! GGAAGGTGCAGCAGGGGAAG+TGG + Chr3:85615974-85615993 None:intergenic 65.0%
!! CGGTCGGGTTGGACGGTTTC+GGG - Chr3:85618088-85618107 MsG0380016604.01.T01:CDS 65.0%
!! GCGGGTGAAACGGATTGGGC+GGG + Chr3:85619025-85619044 None:intergenic 65.0%
!! GGCGGGTGAAACGGATTGGG+CGG + Chr3:85619026-85619045 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 85613262 85620055 85613262 ID=MsG0380016604.01;Name=MsG0380016604.01
Chr3 mRNA 85613262 85620055 85613262 ID=MsG0380016604.01.T01;Parent=MsG0380016604.01;Name=MsG0380016604.01.T01;_AED=0.36;_eAED=0.36;_QI=332|0.9|0.81|1|0.9|0.81|11|414|388
Chr3 exon 85613262 85613733 85613262 ID=MsG0380016604.01.T01:exon:14553;Parent=MsG0380016604.01.T01
Chr3 exon 85613821 85613882 85613821 ID=MsG0380016604.01.T01:exon:14552;Parent=MsG0380016604.01.T01
Chr3 exon 85617493 85617561 85617493 ID=MsG0380016604.01.T01:exon:14551;Parent=MsG0380016604.01.T01
Chr3 exon 85617732 85617779 85617732 ID=MsG0380016604.01.T01:exon:14550;Parent=MsG0380016604.01.T01
Chr3 exon 85617902 85617961 85617902 ID=MsG0380016604.01.T01:exon:14549;Parent=MsG0380016604.01.T01
Chr3 exon 85618076 85618188 85618076 ID=MsG0380016604.01.T01:exon:14548;Parent=MsG0380016604.01.T01
Chr3 exon 85618274 85618346 85618274 ID=MsG0380016604.01.T01:exon:14547;Parent=MsG0380016604.01.T01
Chr3 exon 85618736 85618780 85618736 ID=MsG0380016604.01.T01:exon:14546;Parent=MsG0380016604.01.T01
Chr3 exon 85618884 85618994 85618884 ID=MsG0380016604.01.T01:exon:14545;Parent=MsG0380016604.01.T01
Chr3 exon 85619103 85619704 85619103 ID=MsG0380016604.01.T01:exon:14544;Parent=MsG0380016604.01.T01
Chr3 exon 85619798 85620055 85619798 ID=MsG0380016604.01.T01:exon:14543;Parent=MsG0380016604.01.T01
Chr3 five_prime_UTR 85619798 85620055 85619798 ID=MsG0380016604.01.T01:five_prime_utr;Parent=MsG0380016604.01.T01
Chr3 five_prime_UTR 85619631 85619704 85619631 ID=MsG0380016604.01.T01:five_prime_utr;Parent=MsG0380016604.01.T01
Chr3 CDS 85619103 85619630 85619103 ID=MsG0380016604.01.T01:cds;Parent=MsG0380016604.01.T01
Chr3 CDS 85618884 85618994 85618884 ID=MsG0380016604.01.T01:cds;Parent=MsG0380016604.01.T01
Chr3 CDS 85618736 85618780 85618736 ID=MsG0380016604.01.T01:cds;Parent=MsG0380016604.01.T01
Chr3 CDS 85618274 85618346 85618274 ID=MsG0380016604.01.T01:cds;Parent=MsG0380016604.01.T01
Chr3 CDS 85618076 85618188 85618076 ID=MsG0380016604.01.T01:cds;Parent=MsG0380016604.01.T01
Chr3 CDS 85617902 85617961 85617902 ID=MsG0380016604.01.T01:cds;Parent=MsG0380016604.01.T01
Chr3 CDS 85617732 85617779 85617732 ID=MsG0380016604.01.T01:cds;Parent=MsG0380016604.01.T01
Chr3 CDS 85617493 85617561 85617493 ID=MsG0380016604.01.T01:cds;Parent=MsG0380016604.01.T01
Chr3 CDS 85613821 85613882 85613821 ID=MsG0380016604.01.T01:cds;Parent=MsG0380016604.01.T01
Chr3 CDS 85613676 85613733 85613676 ID=MsG0380016604.01.T01:cds;Parent=MsG0380016604.01.T01
Chr3 three_prime_UTR 85613262 85613675 85613262 ID=MsG0380016604.01.T01:three_prime_utr;Parent=MsG0380016604.01.T01
Gene Sequence

>MsG0380016604.01.T01

ATGGCGGTAGCTGAGAATGTTGGAACCAAAATCGATTCTTCCAGTGAGAATTTGGACAACAGTGTTGTTTCATCGGACTCAACTGAGGTTGTTGAGAAATCCAAACCCAAAACCGATCAGAATCTGAACACCAGCACCGTTAACACCAACGTTGTTGGTGTGATCAATCATCAACAACAAGACAGTGTTCCAAATGGTAACCATGGTTTCATGGCTCATCAAATGGGTCAGATGCATGGAAATGGGGTTCAGAATCAGCATTTGGTTGATGGGTATGGTGGGAATGGGGGTGAGAGTTTCAAGCGTGAAATGAGGGATTTGGAGGAGTTGTTGTCAAAACTGAATCCTATGGCTGAGGAATTTGTGCCACCTTCACTGGTTACTAATTATCATGGCTACTTAGCTGCTGGACCTAATGCTGGGTTTGGTTACCCTAATAACAATTTTATGCTTCAGAATAATTTTGGAAATGCTAATGCTAATGCTAATGCTAATGCTACTGCTAATAATGGACAGATTAACAGAAGGAGGAAGAATGGCTATAATAATGCGAAGCGAAGAGTGTATCATAAGATGGATATGGAGAAAAGAGAAGAGATGATTCGGAGGACTGTTTATGTGTCTGACATTGATCAACAGGTTACTGAAGAGCAGCTGGCGGCTCTCTTTCTTAACTGCGGCCAGGTTGTTGATTGCCGAGTATGCGGGGATCCCAATTCCATTCTTCGGTTTGCATTCGTTGAGTTTACTGATGAAGTTGGTGCTAGGGCTGCTTTGAACCTGTCTGGAACCATGCTTGGATATTATCCATTGAGAGTGCTGCCTTCAAAGACTGCTATTGCACCTGTTAATCCAACTTTTTTGCCCAGGTCTGAAGATGAAAGAGAGATGTGCACCAGAACAATTTATTGCACAAATCTCGACAAGAAGCTTACTCAAGCAGATGTCAAGCACTTCTTTGAATCTATCTGTGGCGAGGTTCAACGTCTGAGGCTTCTTGGGGATTACCATCATTCAACTCGGATTGCTTTTGTGGAGTTTGCAGTGGCTGAGAGTGCAATTGCTGCACTGAGCTGTAGTGGTGTGGTTTTGGGTTCACTACCCATAAGGGTAAGTCCATCAAAGACACCAGTCCGAGCTCGTGCTGTTCGTACTCCCATGCACTGA

Protein sequence

>MsG0380016604.01.T01

MAVAENVGTKIDSSSENLDNSVVSSDSTEVVEKSKPKTDQNLNTSTVNTNVVGVINHQQQDSVPNGNHGFMAHQMGQMHGNGVQNQHLVDGYGGNGGESFKREMRDLEELLSKLNPMAEEFVPPSLVTNYHGYLAAGPNAGFGYPNNNFMLQNNFGNANANANANATANNGQINRRRKNGYNNAKRRVYHKMDMEKREEMIRRTVYVSDIDQQVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFVEFTDEVGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCTRTIYCTNLDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFAVAESAIAALSCSGVVLGSLPIRVSPSKTPVRARAVRTPMH*