AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031964.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031964.01.T01 MTR_7g057770 97.849 93 2 0 1 93 1 93 5.35e-62 191
MsG0680031964.01.T01 MTR_1g023590 97.849 93 2 0 1 93 1 93 1.02e-61 191
MsG0680031964.01.T01 MTR_5g083790 94.624 93 5 0 1 93 1 93 1.29e-59 186
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031964.01.T01 AT5G48760 93.548 93 6 0 1 93 1 93 1.00e-59 186
MsG0680031964.01.T01 AT5G48760 93.548 93 6 0 1 93 1 93 1.00e-59 186
MsG0680031964.01.T01 AT3G07110 91.398 93 8 0 1 93 1 93 5.81e-59 184
MsG0680031964.01.T01 AT3G07110 91.398 93 8 0 1 93 1 93 6.05e-59 184
MsG0680031964.01.T01 AT3G24830 91.398 93 8 0 1 93 1 93 2.73e-58 182
MsG0680031964.01.T01 AT4G13170 91.398 93 8 0 1 93 1 93 1.16e-57 181

Find 41 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATGGTCCTATTCATTTC+AGG 0.115584 6:+30853583 MsG0680031964.01.T01:CDS
ATGCTTAAAGCATCTCAAAA+TGG 0.247831 6:+30858404 MsG0680031964.01.T01:CDS
GGGCTCCTAGTAAGATCTTT+TGG 0.303037 6:+30853604 MsG0680031964.01.T01:CDS
AGCATCTCAAAATGGGATAT+TGG 0.324089 6:+30858412 MsG0680031964.01.T01:CDS
TGAAGTATATGAGATTTCTT+AGG 0.358557 6:+30853538 MsG0680031964.01.T01:CDS
TGTGAAGAGATTTGTGATTC+TGG 0.360597 6:+30853495 MsG0680031964.01.T01:CDS
GTGATTCTGGTGGTCTTGTT+AGG 0.368972 6:+30853508 MsG0680031964.01.T01:CDS
TCATGGTCCTATTCATTTCA+GGG 0.370228 6:+30853584 MsG0680031964.01.T01:CDS
GATGCAAGGCACCACATGTT+AGG 0.404063 6:+30853411 MsG0680031964.01.T01:CDS
ATATTGAAAAGCTTCACATT+TGG 0.421555 6:-30853723 None:intergenic
GAACCATCACCTTGCAATTG+AGG 0.423969 6:+30858305 MsG0680031964.01.T01:CDS
CTAGGAGCCCTGAAATGAAT+AGG 0.426077 6:-30853591 None:intergenic
AAAATGGGATATTGGAATAC+AGG 0.431019 6:+30858420 MsG0680031964.01.T01:CDS
AATAGGACCATGAGAAGGTT+TGG 0.442500 6:-30853574 None:intergenic
TATTGGAATACAGGAGTTGA+TGG 0.444748 6:+30858429 MsG0680031964.01.T01:CDS
TGCTTAAAGCATCTCAAAAT+GGG 0.453834 6:+30858405 MsG0680031964.01.T01:CDS
ATATGAGATTTCTTAGGAAG+AGG 0.471394 6:+30853544 MsG0680031964.01.T01:CDS
TTTCAATATTGTAGCTGTTG+AGG 0.476011 6:+30853737 MsG0680031964.01.T01:CDS
TGAACAAATATATGAAAAGA+AGG 0.504678 6:+30858281 MsG0680031964.01.T01:CDS
GTACGCCAAAAGATCTTACT+AGG 0.507229 6:-30853609 None:intergenic
ATTGAGAAGAATGGAAGAGT+TGG 0.512955 6:+30853765 MsG0680031964.01.T01:CDS
GAACCTCAATTGCAAGGTGA+TGG 0.518034 6:-30858308 None:intergenic
GAGGATTTGATTGAGAAGAA+TGG 0.521123 6:+30853756 MsG0680031964.01.T01:CDS
TACTGTTCGTGGAATGATGT+TGG 0.536018 6:+30853629 MsG0680031964.01.T01:CDS
GTTGCAAAGGAGCTTCTCAA+TGG 0.552197 6:+30853450 MsG0680031964.01.T01:CDS
GAGCAGTGTGCTTTATGTGC+TGG 0.560360 6:-30853663 None:intergenic
ACTTGCTTCCATCGTTGCAA+AGG 0.560932 6:+30853437 MsG0680031964.01.T01:CDS
GAGAAGAATGGAAGAGTTGG+TGG 0.574481 6:+30853768 MsG0680031964.01.T01:CDS
ATTTAAGAACCTCAATTGCA+AGG 0.574744 6:-30858314 None:intergenic
GAGAAGCTCCTTTGCAACGA+TGG 0.584142 6:-30853445 None:intergenic
GGAGCTTCTCAATGGTCAGA+AGG 0.600116 6:+30853458 MsG0680031964.01.T01:CDS
CTAGTAGCTTGCTCATGATG+TGG 0.600383 6:-30853695 None:intergenic
AGGTATCTGCGCAAAGAGGG+TGG 0.610561 6:+30853383 MsG0680031964.01.T01:CDS
TTCAGGTATCTGCGCAAAGA+GGG 0.610853 6:+30853380 MsG0680031964.01.T01:CDS
ATGAACACCAAACCTTCTCA+TGG 0.620990 6:+30853567 MsG0680031964.01.T01:CDS
GTTCAGGTATCTGCGCAAAG+AGG 0.631106 6:+30853379 MsG0680031964.01.T01:CDS
AGAGGGTGGTGATTGATGCA+AGG 0.637601 6:+30853397 MsG0680031964.01.T01:CDS
TCATGAGCAAGCTACTAGCA+AGG 0.643150 6:+30853700 MsG0680031964.01.T01:CDS
AAATGAATAGGACCATGAGA+AGG 0.667076 6:-30853579 None:intergenic
GAAGAGATTTGTGATTCTGG+TGG 0.690683 6:+30853498 MsG0680031964.01.T01:CDS
AAGCAAGTCTACCTAACATG+TGG 0.692845 6:-30853422 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAAAAAAAAATTTACA+GGG - Chr6:30856006-30856025 None:intergenic 10.0%
!! AATAAACATTAAATATATTG+TGG - Chr6:30856550-30856569 None:intergenic 10.0%
!! AGATAATACAAATATAATTT+AGG - Chr6:30854228-30854247 None:intergenic 10.0%
!! TAAATCAAAAAAAAATTTAC+AGG - Chr6:30856007-30856026 None:intergenic 10.0%
!! TTGATATGATATAATATAAT+TGG - Chr6:30855743-30855762 None:intergenic 10.0%
!!! ATATATTTTTGTTATAGTTT+TGG + Chr6:30857665-30857684 MsG0680031964.01.T01:intron 10.0%
!!! ATCAAATTTTTTTGATTAAT+GGG - Chr6:30855480-30855499 None:intergenic 10.0%
!!! TCAATATATTTATTTTAAAG+GGG - Chr6:30857798-30857817 None:intergenic 10.0%
!!! TTAATTTAAATTTTATCTCT+TGG - Chr6:30854360-30854379 None:intergenic 10.0%
!! AAAACTATAGTTTGAATATT+TGG - Chr6:30855573-30855592 None:intergenic 15.0%
!! AAAACTTAATAAACCTTATA+AGG - Chr6:30856292-30856311 None:intergenic 15.0%
!! AATCAAAAAAAAATTTACAG+GGG - Chr6:30856005-30856024 None:intergenic 15.0%
!! AATCACAATAAACAATAAAT+GGG - Chr6:30856395-30856414 None:intergenic 15.0%
!!! AAAAAACATTTATGTTTTGA+AGG + Chr6:30855618-30855637 MsG0680031964.01.T01:intron 15.0%
!!! AACTTGATGATAAAATAAAT+TGG - Chr6:30858214-30858233 None:intergenic 15.0%
!!! ACTTGATGATAAAATAAATT+GGG - Chr6:30858213-30858232 None:intergenic 15.0%
!!! ATCAAAACAATTTTTTTTAC+AGG + Chr6:30856135-30856154 MsG0680031964.01.T01:intron 15.0%
!!! ATCAAAACAATTTTTTTTAC+AGG - Chr6:30856154-30856135 None:intergenic 15.0%
!!! ATCTATTTATGTTTTGAATT+TGG + Chr6:30855438-30855457 MsG0680031964.01.T01:intron 15.0%
!!! CAAAACATAAATAGATTTTT+TGG - Chr6:30855434-30855453 None:intergenic 15.0%
!!! GATCAAATTTTTTTGATTAA+TGG - Chr6:30855481-30855500 None:intergenic 15.0%
!!! TAACATATACCTTTTTTTTA+GGG - Chr6:30856238-30856257 None:intergenic 15.0%
!!! TATATATATATAGCTTTTCA+AGG + Chr6:30858091-30858110 MsG0680031964.01.T01:intron 15.0%
!!! TCAAAACAATTTTTTTTACA+GGG + Chr6:30856136-30856155 MsG0680031964.01.T01:intron 15.0%
!!! TCAAAACAATTTTTTTTACA+GGG - Chr6:30856155-30856136 None:intergenic 15.0%
!!! TTAACATATACCTTTTTTTT+AGG - Chr6:30856239-30856258 None:intergenic 15.0%
!! AAAATGTATGTATCCTTATA+AGG + Chr6:30856276-30856295 MsG0680031964.01.T01:intron 20.0%
!! AAAATGTTTATCTTCTTCAT+TGG - Chr6:30853885-30853904 None:intergenic 20.0%
!! AAATGTTTATCTTCTTCATT+GGG - Chr6:30853884-30853903 None:intergenic 20.0%
!! CAAATAAAAGACTATTTGAA+TGG + Chr6:30856703-30856722 MsG0680031964.01.T01:intron 20.0%
!! CAATCACAATAAACAATAAA+TGG - Chr6:30856396-30856415 None:intergenic 20.0%
!! GGGTAAATAAAAAAAATACA+GGG + Chr6:30856158-30856177 MsG0680031964.01.T01:intron 20.0%
!! GGTAAATAAAAAAAATACAG+GGG + Chr6:30856159-30856178 MsG0680031964.01.T01:intron 20.0%
!! GTAAATAAAAAAAATACAGG+GGG + Chr6:30856160-30856179 MsG0680031964.01.T01:intron 20.0%
!! TAACTTTGTCAATATTGTAT+AGG + Chr6:30854260-30854279 MsG0680031964.01.T01:intron 20.0%
!! TATGAAAAATTTGATTGCAA+TGG + Chr6:30857115-30857134 MsG0680031964.01.T01:intron 20.0%
!! TATGTCTTAATAAACTATCA+AGG + Chr6:30856321-30856340 MsG0680031964.01.T01:intron 20.0%
!! TGAACAAATATATGAAAAGA+AGG + Chr6:30858281-30858300 MsG0680031964.01.T01:CDS 20.0%
!! TGAGAAAAACAAAAAAGTAA+AGG - Chr6:30858240-30858259 None:intergenic 20.0%
!! TTATTGTTTATTGTGATTGT+AGG + Chr6:30856397-30856416 MsG0680031964.01.T01:intron 20.0%
!! TTTAATTGATACTAATGTTG+CGG + Chr6:30857832-30857851 MsG0680031964.01.T01:intron 20.0%
!!! AAAAATGAGTGTTTAAGATA+AGG + Chr6:30857890-30857909 MsG0680031964.01.T01:intron 20.0%
!!! AAAACAATTTTTTTTACAGG+GGG + Chr6:30856138-30856157 MsG0680031964.01.T01:intron 20.0%
!!! AAACTGTATTGTTTGTTTTT+TGG + Chr6:30857972-30857991 MsG0680031964.01.T01:intron 20.0%
!!! AAATAAAATCGGTTTTTGTT+TGG + Chr6:30856096-30856115 MsG0680031964.01.T01:intron 20.0%
!!! AACAAAAACAAACTTGTTTA+TGG - Chr6:30853827-30853846 None:intergenic 20.0%
!!! ATGAAGAAGATAAACATTTT+TGG + Chr6:30853885-30853904 MsG0680031964.01.T01:intron 20.0%
!!! CAAAACAATTTTTTTTACAG+GGG + Chr6:30856137-30856156 MsG0680031964.01.T01:intron 20.0%
!!! CAAAACAATTTTTTTTACAG+GGG - Chr6:30856156-30856137 None:intergenic 20.0%
!!! CACTACTTTCTTTAATTTAT+TGG + Chr6:30857627-30857646 MsG0680031964.01.T01:intron 20.0%
!!! CATTCAAATAGTCTTTTATT+TGG - Chr6:30856705-30856724 None:intergenic 20.0%
!!! TGATTTTCTAAAGTTGATTT+TGG - Chr6:30855683-30855702 None:intergenic 20.0%
! AAAGACTATTTGAATGGATA+AGG + Chr6:30856709-30856728 MsG0680031964.01.T01:intron 25.0%
! AAGAAAAGAAGATTGTTGAT+TGG + Chr6:30857210-30857229 MsG0680031964.01.T01:intron 25.0%
! ATATTGAAAAGCTTCACATT+TGG - Chr6:30853726-30853745 None:intergenic 25.0%
! GAAGAGACAATTATCAATAT+TGG + Chr6:30856674-30856693 MsG0680031964.01.T01:intron 25.0%
! GCTATGTAAATAACATCTAA+TGG + Chr6:30857263-30857282 MsG0680031964.01.T01:intron 25.0%
! GGGGTAAATAAAAAAAATAC+AGG + Chr6:30856157-30856176 MsG0680031964.01.T01:intron 25.0%
! GTTAAAATAATCCACCTTAA+AGG - Chr6:30858002-30858021 None:intergenic 25.0%
! TAACAAAGATTCACTAATCA+CGG + Chr6:30854485-30854504 MsG0680031964.01.T01:intron 25.0%
! TGAAGTATATGAGATTTCTT+AGG + Chr6:30853538-30853557 MsG0680031964.01.T01:CDS 25.0%
! TTTGATTCAGATTCTTGATT+CGG - Chr6:30855147-30855166 None:intergenic 25.0%
!! ACAGGAATGTTAATTTTGTT+TGG - Chr6:30857290-30857309 None:intergenic 25.0%
!! GTTGATTGGTTAATAAATGA+AGG + Chr6:30857224-30857243 MsG0680031964.01.T01:intron 25.0%
!! TATATAATGGAAAAGAACAG+TGG - Chr6:30856469-30856488 None:intergenic 25.0%
!! TTCTTGTTTGATCTTAGATT+GGG - Chr6:30854830-30854849 None:intergenic 25.0%
!! TTTAGGCTTAATTACACTTT+TGG - Chr6:30854211-30854230 None:intergenic 25.0%
!!! AAATGATATTTTTGTCTCCA+TGG - Chr6:30857029-30857048 None:intergenic 25.0%
!!! AATGATATTTTTGTCTCCAT+GGG - Chr6:30857028-30857047 None:intergenic 25.0%
!!! ACCTTTTTTTTAGGGAAAAT+AGG - Chr6:30856230-30856249 None:intergenic 25.0%
!!! CCTTTTTTTTAGGGAAAATA+GGG - Chr6:30856229-30856248 None:intergenic 25.0%
!!! GTTTTTGTTTGACCTATTAA+GGG - Chr6:30856059-30856078 None:intergenic 25.0%
!!! TATCCTTTTTTCAATAGCAA+TGG - Chr6:30857094-30857113 None:intergenic 25.0%
!!! TTTTTGTTTGACCTATTAAG+GGG - Chr6:30856058-30856077 None:intergenic 25.0%
AAAAATTTACAGGGGAAAAC+CGG - Chr6:30855997-30856016 None:intergenic 30.0%
AAAATCTCAAAAAACGACCA+TGG + Chr6:30856437-30856456 MsG0680031964.01.T01:intron 30.0%
AAAATGACCTATATTACAGG+GGG + Chr6:30856189-30856208 MsG0680031964.01.T01:intron 30.0%
AAAATGGGATATTGGAATAC+AGG + Chr6:30858420-30858439 MsG0680031964.01.T01:CDS 30.0%
AACAAAGATTCACTAATCAC+GGG + Chr6:30854486-30854505 MsG0680031964.01.T01:intron 30.0%
AAGAAAAAGATACAAAGACC+CGG + Chr6:30854381-30854400 MsG0680031964.01.T01:intron 30.0%
AGATCTTAACAGATCTGAAA+AGG + Chr6:30854974-30854993 MsG0680031964.01.T01:intron 30.0%
AGATTAGAGTAGATTCACTT+GGG - Chr6:30854461-30854480 None:intergenic 30.0%
ATATGAGATTTCTTAGGAAG+AGG + Chr6:30853544-30853563 MsG0680031964.01.T01:CDS 30.0%
ATGCAATTAAGCAAAGACAA+TGG + Chr6:30856977-30856996 MsG0680031964.01.T01:intron 30.0%
ATTTAAGAACCTCAATTGCA+AGG - Chr6:30858317-30858336 None:intergenic 30.0%
ATTTGAATGGATAAGGTTCA+TGG + Chr6:30856716-30856735 MsG0680031964.01.T01:intron 30.0%
ATTTGTTCAATGCCTAAGAA+AGG - Chr6:30858270-30858289 None:intergenic 30.0%
CAACTGTTTGCACTTAATTA+TGG + Chr6:30857509-30857528 MsG0680031964.01.T01:intron 30.0%
CAAGGTGGTTATCATTTAAA+AGG + Chr6:30856339-30856358 MsG0680031964.01.T01:intron 30.0%
CAATTTACATTACACACATC+AGG - Chr6:30858181-30858200 None:intergenic 30.0%
CATATTTGATTGTTGATGTG+AGG - Chr6:30856763-30856782 None:intergenic 30.0%
CGAAAATGACCTATATTACA+GGG + Chr6:30856187-30856206 MsG0680031964.01.T01:intron 30.0%
CTCACATCAACAATCAAATA+TGG + Chr6:30856761-30856780 MsG0680031964.01.T01:intron 30.0%
GAAAATGACCTATATTACAG+GGG + Chr6:30856188-30856207 MsG0680031964.01.T01:intron 30.0%
GGGTAAAGACATATTAACAT+GGG - Chr6:30855954-30855973 None:intergenic 30.0%
GTCTTAATAAACTATCAAGG+TGG + Chr6:30856324-30856343 MsG0680031964.01.T01:intron 30.0%
TACACGTGTTAAAACCATAT+CGG + Chr6:30855517-30855536 MsG0680031964.01.T01:intron 30.0%
TAGATTAGAGTAGATTCACT+TGG - Chr6:30854462-30854481 None:intergenic 30.0%
TATCTTCTTCATTGGGTTTA+TGG - Chr6:30853877-30853896 None:intergenic 30.0%
TCATTGCACAATCAAATACA+TGG + Chr6:30855710-30855729 MsG0680031964.01.T01:intron 30.0%
TGCAATTAAGCAAAGACAAT+GGG + Chr6:30856978-30856997 MsG0680031964.01.T01:intron 30.0%
TGGCAAAAAAAACACTTATG+TGG - Chr6:30854040-30854059 None:intergenic 30.0%
TTAGGGAAAATAGGGTTAAT+AGG - Chr6:30856221-30856240 None:intergenic 30.0%
TTGCCATATCATCAAAAAAC+TGG + Chr6:30854054-30854073 MsG0680031964.01.T01:intron 30.0%
TTTCAATATTGTAGCTGTTG+AGG + Chr6:30853737-30853756 MsG0680031964.01.T01:CDS 30.0%
TTTGAATGGATAAGGTTCAT+GGG + Chr6:30856717-30856736 MsG0680031964.01.T01:intron 30.0%
TTTGTTCAATGCCTAAGAAA+GGG - Chr6:30858269-30858288 None:intergenic 30.0%
! AACAAACAGTTTTGCAACAA+TGG - Chr6:30855836-30855855 None:intergenic 30.0%
! AGGTCAGAGTAAAAGTTTTA+GGG + Chr6:30855395-30855414 MsG0680031964.01.T01:intron 30.0%
! ATCGTTAAACATGGAGATTT+TGG + Chr6:30856931-30856950 MsG0680031964.01.T01:intron 30.0%
! ATGCTTAAAGCATCTCAAAA+TGG + Chr6:30858404-30858423 MsG0680031964.01.T01:CDS 30.0%
! CCCTATTTTCCCTAAAAAAA+AGG + Chr6:30856226-30856245 MsG0680031964.01.T01:intron 30.0%
! GATTGGTTAATAAATGAAGG+TGG + Chr6:30857227-30857246 MsG0680031964.01.T01:intron 30.0%
! GTTCTTGTTTGATCTTAGAT+TGG - Chr6:30854831-30854850 None:intergenic 30.0%
! TGCAACAATGGTTAATTTTG+AGG - Chr6:30855824-30855843 None:intergenic 30.0%
! TGCTTAAAGCATCTCAAAAT+GGG + Chr6:30858405-30858424 MsG0680031964.01.T01:CDS 30.0%
! TTGCCATTGCTATTGAAAAA+AGG + Chr6:30857088-30857107 MsG0680031964.01.T01:intron 30.0%
!! ACTTTTTGAGCAACATAATG+TGG - Chr6:30854307-30854326 None:intergenic 30.0%
!! CCTGTAATATAGGTCATTTT+CGG - Chr6:30856189-30856208 None:intergenic 30.0%
!! CGTTTTTGTTTGACCTATTA+AGG - Chr6:30856060-30856079 None:intergenic 30.0%
!! TTTGAGATTTTAGTGGCATA+AGG - Chr6:30856428-30856447 None:intergenic 30.0%
!!! AGTTTTGTCCGGTTTTAAAA+GGG + Chr6:30854149-30854168 MsG0680031964.01.T01:intron 30.0%
!!! GTCGTTTTTTGAGATTTTAG+TGG - Chr6:30856435-30856454 None:intergenic 30.0%
!!! GTTTTGATTTACCCCTTAAT+AGG + Chr6:30856044-30856063 MsG0680031964.01.T01:intron 30.0%
!!! TGTCATTTTTGTTGCACTTT+TGG - Chr6:30854118-30854137 None:intergenic 30.0%
!!! TGTCCAGTTTTTTGATGATA+TGG - Chr6:30854060-30854079 None:intergenic 30.0%
!!! TGTTTTTTGGCAAACCTTTA+AGG + Chr6:30857985-30858004 MsG0680031964.01.T01:intron 30.0%
AAATGAATAGGACCATGAGA+AGG - Chr6:30853582-30853601 None:intergenic 35.0%
AAATGACCTATATTACAGGG+GGG - Chr6:30856209-30856190 None:intergenic 35.0%
AAGGATGTCTTGAACCAAAA+GGG + Chr6:30855024-30855043 MsG0680031964.01.T01:intron 35.0%
AGAAAAAGATACAAAGACCC+GGG + Chr6:30854382-30854401 MsG0680031964.01.T01:intron 35.0%
AGCATCTCAAAATGGGATAT+TGG + Chr6:30858412-30858431 MsG0680031964.01.T01:CDS 35.0%
ATCTCCATGTTTAACGATGT+TGG - Chr6:30856929-30856948 None:intergenic 35.0%
ATTGAGAAGAATGGAAGAGT+TGG + Chr6:30853765-30853784 MsG0680031964.01.T01:CDS 35.0%
CCAGTTCAAATAGACATTGA+AGG + Chr6:30857693-30857712 MsG0680031964.01.T01:intron 35.0%
CCGAAAATGACCTATATTAC+AGG + Chr6:30856186-30856205 MsG0680031964.01.T01:intron 35.0%
CCTGTAATATAGGTCATTTC+CGG + Chr6:30855975-30855994 MsG0680031964.01.T01:intron 35.0%
CCTTCAATGTCTATTTGAAC+TGG - Chr6:30857696-30857715 None:intergenic 35.0%
CGGAAATGACCTATATTACA+GGG - Chr6:30855977-30855996 None:intergenic 35.0%
CTACAGTTAGAGTGTGATTA+TGG + Chr6:30854586-30854605 MsG0680031964.01.T01:intron 35.0%
CTTGCGAACTATATTCAATG+AGG + Chr6:30856888-30856907 MsG0680031964.01.T01:intron 35.0%
CTTTACCAAAGATTTCTGCA+TGG - Chr6:30857433-30857452 None:intergenic 35.0%
GAAATGACCTATATTACAGG+GGG - Chr6:30855975-30855994 None:intergenic 35.0%
GAGGATTTGATTGAGAAGAA+TGG + Chr6:30853756-30853775 MsG0680031964.01.T01:CDS 35.0%
GCAACAAAAATGACAACTGA+AGG + Chr6:30854123-30854142 MsG0680031964.01.T01:intron 35.0%
GCTCAGACAGTGTTATATAA+TGG - Chr6:30856482-30856501 None:intergenic 35.0%
GGAAATGACCTATATTACAG+GGG - Chr6:30855976-30855995 None:intergenic 35.0%
GGGGTAAAGACATATTAACA+TGG - Chr6:30855955-30855974 None:intergenic 35.0%
GGTGGTTATCATTTAAAAGG+AGG + Chr6:30856342-30856361 MsG0680031964.01.T01:intron 35.0%
GTTAAGATCTGCAAATGTCT+TGG - Chr6:30854964-30854983 None:intergenic 35.0%
TAAAGGGGTTAATGACTACT+TGG - Chr6:30857783-30857802 None:intergenic 35.0%
TAAGGATGTCTTGAACCAAA+AGG + Chr6:30855023-30855042 MsG0680031964.01.T01:intron 35.0%
TATTGGAATACAGGAGTTGA+TGG + Chr6:30858429-30858448 MsG0680031964.01.T01:CDS 35.0%
TCAAGGTGTAATGAGTAAGT+TGG + Chr6:30858108-30858127 MsG0680031964.01.T01:intron 35.0%
TCATGGTCCTATTCATTTCA+GGG + Chr6:30853584-30853603 MsG0680031964.01.T01:CDS 35.0%
TCTCCATGTTTAACGATGTT+GGG - Chr6:30856928-30856947 None:intergenic 35.0%
TCTGTTACAAAAACCCGAAA+GGG - Chr6:30854752-30854771 None:intergenic 35.0%
TGATGTCTAAAAGACCGATA+TGG - Chr6:30855534-30855553 None:intergenic 35.0%
TGCAATGGAACCAAAATCAT+TGG + Chr6:30857130-30857149 MsG0680031964.01.T01:intron 35.0%
TGTGAAGAGATTTGTGATTC+TGG + Chr6:30853495-30853514 MsG0680031964.01.T01:CDS 35.0%
TTTCAATAGCAATGGCAACA+TGG - Chr6:30857086-30857105 None:intergenic 35.0%
! ATCACGATACATTCCTGTTT+TGG - Chr6:30854431-30854450 None:intergenic 35.0%
! GAGATCTTAAGCTTGTTTAG+CGG - Chr6:30856869-30856888 None:intergenic 35.0%
! GAGGTCAGAGTAAAAGTTTT+AGG + Chr6:30855394-30855413 MsG0680031964.01.T01:intron 35.0%
! GTTTTTGTAACAGACCCTTT+CGG + Chr6:30854758-30854777 MsG0680031964.01.T01:intron 35.0%
! TCTCTTGCTTCCAATGATTT+TGG - Chr6:30857143-30857162 None:intergenic 35.0%
! TGATTTGCAACAAAAGCAAG+AGG - Chr6:30857182-30857201 None:intergenic 35.0%
! TTTTTGTAACAGACCCTTTC+GGG + Chr6:30854759-30854778 MsG0680031964.01.T01:intron 35.0%
!! GGTTTTTGTTTGGCCTATTA+GGG + Chr6:30856106-30856125 MsG0680031964.01.T01:intron 35.0%
!! GTTTTTGTTTGGCCTATTAG+GGG + Chr6:30856107-30856126 MsG0680031964.01.T01:intron 35.0%
!! TAAGTTGGTGAATTCTCGTA+CGG + Chr6:30858123-30858142 MsG0680031964.01.T01:intron 35.0%
!! TCAGATTCTTGATTCGGTTT+CGG - Chr6:30855141-30855160 None:intergenic 35.0%
!! TTTATGCTTGCTGTTGTTCA+GGG - Chr6:30854661-30854680 None:intergenic 35.0%
!! TTTTTGGCAAACCTTTAAGG+TGG + Chr6:30857988-30858007 MsG0680031964.01.T01:intron 35.0%
!! TTTTTGTTTGGCCTATTAGG+GGG + Chr6:30856108-30856127 MsG0680031964.01.T01:intron 35.0%
!!! AGCGTTTTGGAGGAAAAAAT+GGG + Chr6:30854084-30854103 MsG0680031964.01.T01:intron 35.0%
!!! ATTCCTGTTTTGGTTTTCCT+GGG - Chr6:30854421-30854440 None:intergenic 35.0%
!!! CAGTTTTGTCCGGTTTTAAA+AGG + Chr6:30854148-30854167 MsG0680031964.01.T01:intron 35.0%
!!! CTTTTAAAACCGGACAAAAC+TGG - Chr6:30854150-30854169 None:intergenic 35.0%
!!! CTTTTGGTGTTTTTGTTCGT+TGG - Chr6:30854902-30854921 None:intergenic 35.0%
!!! GTCAATGTCATTTTCCATGT+TGG + Chr6:30854009-30854028 MsG0680031964.01.T01:intron 35.0%
!!! TTTTATGCTTGCTGTTGTTC+AGG - Chr6:30854662-30854681 None:intergenic 35.0%
!!! TTTTGATTTACCCCCCTAAT+AGG - Chr6:30856122-30856141 None:intergenic 35.0%
AAGCAAGTCTACCTAACATG+TGG - Chr6:30853425-30853444 None:intergenic 40.0%
AATAGGACCATGAGAAGGTT+TGG - Chr6:30853577-30853596 None:intergenic 40.0%
ATAACCAGCAGATCTCATGA+TGG + Chr6:30857723-30857742 MsG0680031964.01.T01:intron 40.0%
ATCAAAGGCCATGAACAGTA+AGG + Chr6:30855005-30855024 MsG0680031964.01.T01:intron 40.0%
ATCATTGGAAGCAAGAGACT+CGG + Chr6:30857145-30857164 MsG0680031964.01.T01:intron 40.0%
ATCGGTTACTTAAACCCGAA+AGG - Chr6:30854776-30854795 None:intergenic 40.0%
ATGAACACCAAACCTTCTCA+TGG + Chr6:30853567-30853586 MsG0680031964.01.T01:CDS 40.0%
ATGAAGTTTGGAAAGAGGGT+GGG + Chr6:30855338-30855357 MsG0680031964.01.T01:intron 40.0%
ATGTCTTGAACCAAAAGGGA+AGG + Chr6:30855028-30855047 MsG0680031964.01.T01:intron 40.0%
CAAGACATCCTTACTGTTCA+TGG - Chr6:30855016-30855035 None:intergenic 40.0%
CCGGAAATGACCTATATTAC+AGG - Chr6:30855978-30855997 None:intergenic 40.0%
CTCATGGTCCTATTCATTTC+AGG + Chr6:30853583-30853602 MsG0680031964.01.T01:CDS 40.0%
CTTATGTGGCAATTCCAACA+TGG - Chr6:30854026-30854045 None:intergenic 40.0%
GAAAAGGAACCAGAGATCAA+AGG + Chr6:30854990-30855009 MsG0680031964.01.T01:intron 40.0%
GAACCCAACATCGTTAAACA+TGG + Chr6:30856922-30856941 MsG0680031964.01.T01:intron 40.0%
GAAGAGATTTGTGATTCTGG+TGG + Chr6:30853498-30853517 MsG0680031964.01.T01:CDS 40.0%
GTAATTCTTGCAGCAGCAAA+GGG + Chr6:30857308-30857327 MsG0680031964.01.T01:intron 40.0%
GTACGCCAAAAGATCTTACT+AGG - Chr6:30853612-30853631 None:intergenic 40.0%
GTCTGTTACAAAAACCCGAA+AGG - Chr6:30854753-30854772 None:intergenic 40.0%
GTCTTTACCCCCTGTAATAT+AGG - Chr6:30856199-30856218 None:intergenic 40.0%
GTGGATGAAGTTTGGAAAGA+GGG + Chr6:30855334-30855353 MsG0680031964.01.T01:intron 40.0%
TACTGTTCGTGGAATGATGT+TGG + Chr6:30853629-30853648 MsG0680031964.01.T01:CDS 40.0%
TAGAGTGTGATTATGGCGAA+TGG + Chr6:30854593-30854612 MsG0680031964.01.T01:intron 40.0%
TCATGGGACTACACAATTGA+GGG + Chr6:30856733-30856752 MsG0680031964.01.T01:intron 40.0%
TCGGTTACTTAAACCCGAAA+GGG - Chr6:30854775-30854794 None:intergenic 40.0%
TCTCTTTCCAAAACCGACAA+TGG + Chr6:30856580-30856599 MsG0680031964.01.T01:intron 40.0%
TCTTTACCCCCCTGTAATAT+AGG + Chr6:30855965-30855984 MsG0680031964.01.T01:intron 40.0%
TGCATCCATGCAGAAATCTT+TGG + Chr6:30857425-30857444 MsG0680031964.01.T01:intron 40.0%
TGTAATTCTTGCAGCAGCAA+AGG + Chr6:30857307-30857326 MsG0680031964.01.T01:intron 40.0%
TTCATGGGACTACACAATTG+AGG + Chr6:30856732-30856751 MsG0680031964.01.T01:intron 40.0%
TTTGCTGCTGCAAGAATTAC+AGG - Chr6:30857308-30857327 None:intergenic 40.0%
TTTGGTGAGAAGTTAGAGAG+AGG + Chr6:30855375-30855394 MsG0680031964.01.T01:intron 40.0%
! ATCATGAGATCTGCTGGTTA+TGG - Chr6:30857724-30857743 None:intergenic 40.0%
! CTTGGATTTTGTTACCGTGT+TGG - Chr6:30854627-30854646 None:intergenic 40.0%
! TATCTATGTGCCTTCCCTTT+TGG - Chr6:30855041-30855060 None:intergenic 40.0%
! TATGAAGCATCTGAGTCTAC+TGG + Chr6:30857048-30857067 MsG0680031964.01.T01:intron 40.0%
! TTTTGCCAAACTCGCGAAAT+TGG - Chr6:30854180-30854199 None:intergenic 40.0%
!! AAGTTGGTGAATTCTCGTAC+GGG + Chr6:30858124-30858143 MsG0680031964.01.T01:intron 40.0%
!! CGGTTTTTGTTTGGCCTATT+AGG + Chr6:30856105-30856124 MsG0680031964.01.T01:intron 40.0%
!! GTGTTGGTTGTTGGATCTTT+GGG - Chr6:30855104-30855123 None:intergenic 40.0%
!! TTTTGTTTGGCCTATTAGGG+GGG + Chr6:30856109-30856128 MsG0680031964.01.T01:intron 40.0%
!!! AGTGACGTGACCTTATTTTG+CGG - Chr6:30854802-30854821 None:intergenic 40.0%
!!! CAGCGTTTTGGAGGAAAAAA+TGG + Chr6:30854083-30854102 MsG0680031964.01.T01:intron 40.0%
!!! CATTCCTGTTTTGGTTTTCC+TGG - Chr6:30854422-30854441 None:intergenic 40.0%
!!! CGTTTTGGAGGAAAAAATGG+GGG + Chr6:30854086-30854105 MsG0680031964.01.T01:intron 40.0%
!!! GCGTTTTGGAGGAAAAAATG+GGG + Chr6:30854085-30854104 MsG0680031964.01.T01:intron 40.0%
!!! GTTTTGGAGGAAAAAATGGG+GGG + Chr6:30854087-30854106 MsG0680031964.01.T01:intron 40.0%
!!! TGGTCATGCCCTTTTAAAAC+CGG - Chr6:30854160-30854179 None:intergenic 40.0%
AACCGATCCACCGCAAAATA+AGG + Chr6:30854789-30854808 MsG0680031964.01.T01:intron 45.0%
ACAATGGCAACAGGTCATCA+TGG + Chr6:30856596-30856615 MsG0680031964.01.T01:intron 45.0%
ACATCACGGTGGATGAAGTT+TGG + Chr6:30855326-30855345 MsG0680031964.01.T01:intron 45.0%
ACGACGAATGAGAGGTGAAA+GGG + Chr6:30855207-30855226 MsG0680031964.01.T01:intron 45.0%
ACTAATGTTGCGGCAATGTG+AGG + Chr6:30857842-30857861 MsG0680031964.01.T01:intron 45.0%
ACTTGCTTCCATCGTTGCAA+AGG + Chr6:30853437-30853456 MsG0680031964.01.T01:CDS 45.0%
CATGACCAATTTCGCGAGTT+TGG + Chr6:30854172-30854191 MsG0680031964.01.T01:intron 45.0%
CTAGGAGCCCTGAAATGAAT+AGG - Chr6:30853594-30853613 None:intergenic 45.0%
GAACCATCACCTTGCAATTG+AGG + Chr6:30858305-30858324 MsG0680031964.01.T01:CDS 45.0%
GAACCTCAATTGCAAGGTGA+TGG - Chr6:30858311-30858330 None:intergenic 45.0%
GAATCCATCATCATCACCCA+TGG + Chr6:30857009-30857028 MsG0680031964.01.T01:intron 45.0%
GAGAAGAATGGAAGAGTTGG+TGG + Chr6:30853768-30853787 MsG0680031964.01.T01:CDS 45.0%
GATGAAGTTTGGAAAGAGGG+TGG + Chr6:30855337-30855356 MsG0680031964.01.T01:intron 45.0%
GGATTCAGGATTACTGGTGT+TGG - Chr6:30855120-30855139 None:intergenic 45.0%
GGTGGATGAAGTTTGGAAAG+AGG + Chr6:30855333-30855352 MsG0680031964.01.T01:intron 45.0%
GGTTTCGGATTCAGGATTAC+TGG - Chr6:30855126-30855145 None:intergenic 45.0%
GTTGCAAAGGAGCTTCTCAA+TGG + Chr6:30853450-30853469 MsG0680031964.01.T01:CDS 45.0%
TACAAAAACCCGAAAGGGTC+TGG - Chr6:30854747-30854766 None:intergenic 45.0%
TCATGAGCAAGCTACTAGCA+AGG + Chr6:30853700-30853719 MsG0680031964.01.T01:CDS 45.0%
TCATTGGAAGCAAGAGACTC+GGG + Chr6:30857146-30857165 MsG0680031964.01.T01:intron 45.0%
TGACCCAGGAAAACCAAAAC+AGG + Chr6:30854415-30854434 MsG0680031964.01.T01:intron 45.0%
TGATGACCTGTTGCCATTGT+CGG - Chr6:30856596-30856615 None:intergenic 45.0%
TGTTCATGGCCTTTGATCTC+TGG - Chr6:30855002-30855021 None:intergenic 45.0%
TTCAGGTATCTGCGCAAAGA+GGG + Chr6:30853380-30853399 MsG0680031964.01.T01:CDS 45.0%
TTGGTTGTTGGATCTTTGGG+TGG - Chr6:30855101-30855120 None:intergenic 45.0%
! AACTGGACACATCAGCGTTT+TGG + Chr6:30854071-30854090 MsG0680031964.01.T01:intron 45.0%
! AAGAACAGTGGTGATGACCA+TGG - Chr6:30856457-30856476 None:intergenic 45.0%
! ATCTTTTGGCGTACTGTTCG+TGG + Chr6:30853618-30853637 MsG0680031964.01.T01:CDS 45.0%
! GGATTTTGTTACCGTGTTGG+TGG - Chr6:30854624-30854643 None:intergenic 45.0%
! GGGCTCCTAGTAAGATCTTT+TGG + Chr6:30853604-30853623 MsG0680031964.01.T01:CDS 45.0%
! TGAAGGTGGAAATGACTTGC+TGG + Chr6:30857241-30857260 MsG0680031964.01.T01:intron 45.0%
!! ACTGAAGGACCAGTTTTGTC+CGG + Chr6:30854138-30854157 MsG0680031964.01.T01:intron 45.0%
!! CTAGTAGCTTGCTCATGATG+TGG - Chr6:30853698-30853717 None:intergenic 45.0%
!! CTTGATTCGGTTTCGGATTC+AGG - Chr6:30855134-30855153 None:intergenic 45.0%
!! GGAAGAGTTGGTGGTGTTAA+TGG + Chr6:30853777-30853796 MsG0680031964.01.T01:intron 45.0%
!! GGATTACTGGTGTTGGTTGT+TGG - Chr6:30855113-30855132 None:intergenic 45.0%
!! GGTGTTGGTTGTTGGATCTT+TGG - Chr6:30855105-30855124 None:intergenic 45.0%
!! GTGATTCTGGTGGTCTTGTT+AGG + Chr6:30853508-30853527 MsG0680031964.01.T01:CDS 45.0%
!!! GACCTTATTTTGCGGTGGAT+CGG - Chr6:30854794-30854813 None:intergenic 45.0%
!!! TGTTTTGGTTTTCCTGGGTC+AGG - Chr6:30854416-30854435 None:intergenic 45.0%
!!! ATACATTTTAAATAAAATTA+AGG - Chr6:30856265-30856284 None:intergenic 5.0%
!!! ATTCAATATATTTATTTTAA+AGG - Chr6:30857800-30857819 None:intergenic 5.0%
!!! TTCAATATATTTATTTTAAA+GGG - Chr6:30857799-30857818 None:intergenic 5.0%
!!! TTCTTTAAAAAAAATAAAAT+CGG + Chr6:30856085-30856104 MsG0680031964.01.T01:intron 5.0%
AGAGGGTGGTGATTGATGCA+AGG + Chr6:30853397-30853416 MsG0680031964.01.T01:CDS 50.0%
AGGAGTGAAAACCCCGAAGA+TGG + Chr6:30855250-30855269 MsG0680031964.01.T01:intron 50.0%
ATTGGAAGCAAGAGACTCGG+GGG + Chr6:30857148-30857167 MsG0680031964.01.T01:intron 50.0%
CAAAAGAAACCCCGAACCAC+TGG + Chr6:30854916-30854935 MsG0680031964.01.T01:intron 50.0%
CACGACGAATGAGAGGTGAA+AGG + Chr6:30855206-30855225 MsG0680031964.01.T01:intron 50.0%
CATTGGAAGCAAGAGACTCG+GGG + Chr6:30857147-30857166 MsG0680031964.01.T01:intron 50.0%
CCAAAACCGACAATGGCAAC+AGG + Chr6:30856587-30856606 MsG0680031964.01.T01:intron 50.0%
CGAATGAGAGGTGAAAGGGA+CGG + Chr6:30855211-30855230 MsG0680031964.01.T01:intron 50.0%
CGCGAGTTTGGCAAAACACA+AGG + Chr6:30854184-30854203 MsG0680031964.01.T01:intron 50.0%
CGGTTGAAAGGGCTACATCA+CGG + Chr6:30855312-30855331 MsG0680031964.01.T01:intron 50.0%
CGTCAGTAACCAGACCCTTT+CGG + Chr6:30854735-30854754 MsG0680031964.01.T01:intron 50.0%
CGTGATGTAGCCCTTTCAAC+CGG - Chr6:30855314-30855333 None:intergenic 50.0%
CTCTCCATCATGAGATCTGC+TGG - Chr6:30857730-30857749 None:intergenic 50.0%
CTTTCACCTCTCATTCGTCG+TGG - Chr6:30855208-30855227 None:intergenic 50.0%
GAATGGATCGACCACCAACA+CGG + Chr6:30854610-30854629 MsG0680031964.01.T01:intron 50.0%
GAGAAGCTCCTTTGCAACGA+TGG - Chr6:30853448-30853467 None:intergenic 50.0%
GAGCAGTGTGCTTTATGTGC+TGG - Chr6:30853666-30853685 None:intergenic 50.0%
GAGTGAAAACCCCGAAGATG+GGG + Chr6:30855252-30855271 MsG0680031964.01.T01:intron 50.0%
GATACAAAGACCCGGGACAT+AGG + Chr6:30854389-30854408 MsG0680031964.01.T01:intron 50.0%
GGAGCTTCTCAATGGTCAGA+AGG + Chr6:30853458-30853477 MsG0680031964.01.T01:CDS 50.0%
GGAGTGAAAACCCCGAAGAT+GGG + Chr6:30855251-30855270 MsG0680031964.01.T01:intron 50.0%
GTCAGTAACCAGACCCTTTC+GGG + Chr6:30854736-30854755 MsG0680031964.01.T01:intron 50.0%
GTTCAGGTATCTGCGCAAAG+AGG + Chr6:30853379-30853398 MsG0680031964.01.T01:CDS 50.0%
GTTGTTGGATCTTTGGGTGG+TGG - Chr6:30855098-30855117 None:intergenic 50.0%
TCTCATGCTCGCCCTTTCTT+AGG + Chr6:30858255-30858274 MsG0680031964.01.T01:intron 50.0%
TGGAGGAAAAAATGGGGGGT+AGG + Chr6:30854091-30854110 MsG0680031964.01.T01:intron 50.0%
TGGGTTTGACGGTGGTTGTT+TGG + Chr6:30855357-30855376 MsG0680031964.01.T01:intron 50.0%
TTGAAAGGGCTACATCACGG+TGG + Chr6:30855315-30855334 MsG0680031964.01.T01:intron 50.0%
! ATCTTTGGGTGGTGGTTTGG+TGG - Chr6:30855090-30855109 None:intergenic 50.0%
! CATGCGATTCGACTTGTACG+TGG + Chr6:30856808-30856827 MsG0680031964.01.T01:intron 50.0%
! CTTGCGTCGTCGTGTTTTGT+TGG - Chr6:30855181-30855200 None:intergenic 50.0%
! GATGCAAGGCACCACATGTT+AGG + Chr6:30853411-30853430 MsG0680031964.01.T01:CDS 50.0%
! GGGTTTTCACTCCTTTCCTC+CGG - Chr6:30855244-30855263 None:intergenic 50.0%
! GTCTCCATGGGTGATGATGA+TGG - Chr6:30857016-30857035 None:intergenic 50.0%
! TGGAAAGAGGGTGGGTTTGA+CGG + Chr6:30855346-30855365 MsG0680031964.01.T01:intron 50.0%
! TGGACACATCAGCGTTTTGG+AGG + Chr6:30854074-30854093 MsG0680031964.01.T01:intron 50.0%
! TGGATCTTTGGGTGGTGGTT+TGG - Chr6:30855093-30855112 None:intergenic 50.0%
! TTTGGTGGACGGTTCTTGCA+GGG - Chr6:30855075-30855094 None:intergenic 50.0%
!! CAGTGGTTCGGGGTTTCTTT+TGG - Chr6:30854918-30854937 None:intergenic 50.0%
!! CGTCGTGTTTTGTTGGTGTG+AGG - Chr6:30855174-30855193 None:intergenic 50.0%
!!! CCTGTTGCCATTGTCGGTTT+TGG - Chr6:30856590-30856609 None:intergenic 50.0%
!!! GACGTGACCTTATTTTGCGG+TGG - Chr6:30854799-30854818 None:intergenic 50.0%
AACAACTCTCGTCGCACCAC+CGG + Chr6:30855292-30855311 MsG0680031964.01.T01:intron 55.0%
AAGATGGGGAGGAGGTGATG+CGG + Chr6:30855266-30855285 MsG0680031964.01.T01:intron 55.0%
ACGCGTGAGAACTCAGATCG+AGG + Chr6:30854699-30854718 MsG0680031964.01.T01:intron 55.0%
AGGTATCTGCGCAAAGAGGG+TGG + Chr6:30853383-30853402 MsG0680031964.01.T01:CDS 55.0%
ATCACCTCCTCCCCATCTTC+GGG - Chr6:30855265-30855284 None:intergenic 55.0%
CAAAACACGACGACGCAAGC+TGG + Chr6:30855182-30855201 MsG0680031964.01.T01:intron 55.0%
CATCACCTCCTCCCCATCTT+CGG - Chr6:30855266-30855285 None:intergenic 55.0%
CGCGTGAGAACTCAGATCGA+GGG + Chr6:30854700-30854719 MsG0680031964.01.T01:intron 55.0%
GATGTAGCCCTTTCAACCGG+TGG - Chr6:30855311-30855330 None:intergenic 55.0%
GCTGTTGTTCAGGGAGCTGT+TGG - Chr6:30854652-30854671 None:intergenic 55.0%
TGAAAACCCCGAAGATGGGG+AGG + Chr6:30855255-30855274 MsG0680031964.01.T01:intron 55.0%
TGAAAGGGACGGAAGATCGC+CGG + Chr6:30855222-30855241 MsG0680031964.01.T01:intron 55.0%
TTCAGGGAGCTGTTGGCACT+TGG - Chr6:30854645-30854664 None:intergenic 55.0%
TTGGAAGCAAGAGACTCGGG+GGG + Chr6:30857149-30857168 MsG0680031964.01.T01:intron 55.0%
! AAAGAGGGTGGGTTTGACGG+TGG + Chr6:30855349-30855368 MsG0680031964.01.T01:intron 55.0%
! GTTTGGTGGACGGTTCTTGC+AGG - Chr6:30855076-30855095 None:intergenic 55.0%
!! TTGGGTGGTGGTTTGGTGGA+CGG - Chr6:30855086-30855105 None:intergenic 55.0%
AAACCCCGAAGATGGGGAGG+AGG + Chr6:30855258-30855277 MsG0680031964.01.T01:intron 60.0%
ACCTGTTTCGCGCCAGTACG+CGG - Chr6:30854527-30854546 None:intergenic 60.0%
ACGGAAGATCGCCGGAGGAA+AGG + Chr6:30855230-30855249 MsG0680031964.01.T01:intron 60.0%
AGCTGGCCACGACGAATGAG+AGG + Chr6:30855199-30855218 MsG0680031964.01.T01:intron 60.0%
ATTCGTCGCCTTCACGCCAG+TGG - Chr6:30854935-30854954 None:intergenic 60.0%
CTGGGTCAGGTCCTATGTCC+CGG - Chr6:30854403-30854422 None:intergenic 60.0%
GTGGACGGTTCTTGCAGGGT+CGG - Chr6:30855071-30855090 None:intergenic 60.0%
TCACCTCCTCCCCATCTTCG+GGG - Chr6:30855264-30855283 None:intergenic 60.0%
TCGCCTTCACGCCAGTGGTT+CGG - Chr6:30854930-30854949 None:intergenic 60.0%
TGGGTCAGGTCCTATGTCCC+GGG - Chr6:30854402-30854421 None:intergenic 60.0%
! CGTCGCACCACCGGTTGAAA+GGG + Chr6:30855301-30855320 MsG0680031964.01.T01:intron 60.0%
! TCGTCGCACCACCGGTTGAA+AGG + Chr6:30855300-30855319 MsG0680031964.01.T01:intron 60.0%
AACCCAGCGAACCCGCGTAC+TGG + Chr6:30854512-30854531 MsG0680031964.01.T01:intron 65.0%
AAGGGACGGAAGATCGCCGG+AGG + Chr6:30855225-30855244 MsG0680031964.01.T01:intron 65.0%
ACCCCGAACCACTGGCGTGA+AGG + Chr6:30854924-30854943 MsG0680031964.01.T01:intron 65.0%
CCTGTTTCGCGCCAGTACGC+GGG - Chr6:30854526-30854545 None:intergenic 65.0%
CGCCTTCACGCCAGTGGTTC+GGG - Chr6:30854929-30854948 None:intergenic 65.0%
CGGGACATAGGACCTGACCC+AGG + Chr6:30854401-30854420 MsG0680031964.01.T01:intron 65.0%
GACGGTTCTTGCAGGGTCGG+TGG - Chr6:30855068-30855087 None:intergenic 65.0%
GCCTTCACGCCAGTGGTTCG+GGG - Chr6:30854928-30854947 None:intergenic 65.0%
GGTTCTTGCAGGGTCGGTGG+CGG - Chr6:30855065-30855084 None:intergenic 65.0%
CGCCAGTACGCGGGTTCGCT+GGG - Chr6:30854517-30854536 None:intergenic 70.0%
! CCCGCGTACTGGCGCGAAAC+AGG + Chr6:30854523-30854542 MsG0680031964.01.T01:intron 70.0%
GCGCCAGTACGCGGGTTCGC+TGG - Chr6:30854518-30854537 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 30853369 30858455 30853369 ID=MsG0680031964.01;Name=MsG0680031964.01
Chr6 mRNA 30853369 30858455 30853369 ID=MsG0680031964.01.T01;Parent=MsG0680031964.01;Name=MsG0680031964.01.T01;_AED=0.55;_eAED=0.65;_QI=0|0|0|1|0|0|2|0|199
Chr6 exon 30853369 30853789 30853369 ID=MsG0680031964.01.T01:exon:8630;Parent=MsG0680031964.01.T01
Chr6 exon 30858277 30858455 30858277 ID=MsG0680031964.01.T01:exon:8631;Parent=MsG0680031964.01.T01
Chr6 CDS 30853369 30853789 30853369 ID=MsG0680031964.01.T01:cds;Parent=MsG0680031964.01.T01
Chr6 CDS 30858277 30858455 30858277 ID=MsG0680031964.01.T01:cds;Parent=MsG0680031964.01.T01
Gene Sequence

>MsG0680031964.01.T01

ATGGTGTCTGGTTCAGGTATCTGCGCAAAGAGGGTGGTGATTGATGCAAGGCACCACATGTTAGGTAGACTTGCTTCCATCGTTGCAAAGGAGCTTCTCAATGGTCAGAAGGTTGTTCTTGTTAGATGTGAAGAGATTTGTGATTCTGGTGGTCTTGTTAGGCAGAAGATGAAGTATATGAGATTTCTTAGGAAGAGGATGAACACCAAACCTTCTCATGGTCCTATTCATTTCAGGGCTCCTAGTAAGATCTTTTGGCGTACTGTTCGTGGAATGATGTTGGTTGTGCGTAAGCCAGCACATAAAGCACACTGCTCTTTTCACTTCCACATCATGAGCAAGCTACTAGCAAGGCCAAATGTGAAGCTTTTCAATATTGTAGCTGTTGAGGATTTGATTGAGAAGAATGGAAGAGTTGGTGGCATTGAACAAATATATGAAAAGAAGGTGAACCATCACCTTGCAATTGAGGTTCTTAAATATTTTTGTGAAAGAATAAAAAAAAAATCTTTCAATCAAAACTTTACGAGTTGTCAGTTCAACATGCAATGCTTAAAGCATCTCAAAATGGGATATTGGAATACAGGAGTTGATGGATAA

Protein sequence

>MsG0680031964.01.T01

MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICDSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMMLVVRKPAHKAHCSFHFHIMSKLLARPNVKLFNIVAVEDLIEKNGRVGGIEQIYEKKVNHHLAIEVLKYFCERIKKKSFNQNFTSCQFNMQCLKHLKMGYWNTGVDG*