AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043816.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043816.01.T01 MTR_8g041740 94.843 543 22 2 7 543 7 549 0.0 1019
MsG0880043816.01.T01 MTR_8g045440 90.993 544 42 3 7 543 7 550 0.0 964
MsG0880043816.01.T01 MTR_8g045463 85.118 551 65 4 1 543 1 542 0.0 913
MsG0880043816.01.T01 MTR_8g045470 85.118 551 65 4 1 543 1 542 0.0 913
MsG0880043816.01.T01 MTR_8g045440 92.695 397 24 1 7 398 7 403 0.0 723
MsG0880043816.01.T01 MTR_5g069620 75.000 84 21 0 35 118 10 93 3.63e-37 133
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043816.01.T01 AT3G21060 68.242 529 157 5 7 529 7 530 0.0 693

Find 139 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCTATCACTTCCGAAAA+TGG 0.227326 8:-31104666 None:intergenic
TGAGTGGAATAGTTTATATC+TGG 0.238272 8:+31104245 MsG0880043816.01.T01:CDS
AGAAGTAATAGAAGAGTATT+TGG 0.243954 8:+31100543 MsG0880043816.01.T01:CDS
CTCTTCATCACCACTGAAAC+AGG 0.280016 8:-31104071 None:intergenic
AGAGAAGGTGTTGGAGTTGC+AGG 0.281426 8:+31104999 MsG0880043816.01.T01:CDS
TTCATATCCTTGCAGGTAAA+AGG 0.287426 8:+31104453 MsG0880043816.01.T01:intron
AGTGCTCTAACTTCATCTTT+TGG 0.292327 8:-31103923 None:intergenic
AAATCAATCATATTTATATA+TGG 0.293497 8:-31105253 None:intergenic
TCCTCAATCTCTTTGAAATC+AGG 0.297441 8:-31104304 None:intergenic
AAATACTCTTCTATTACTTC+TGG 0.298446 8:-31100541 None:intergenic
CCAGTTCTCAATGTAATCTT+TGG 0.299795 8:-31104269 None:intergenic
AAGAACCAAAACTAAATCTT+TGG 0.299874 8:+31105062 MsG0880043816.01.T01:CDS
GAATGACAACAGATTGTAAA+TGG 0.319320 8:+31105132 MsG0880043816.01.T01:exon
TAGAAAGTTCTTCAAAGATT+GGG 0.331449 8:+31104622 MsG0880043816.01.T01:CDS
GATGCCACGCTAAATCAATA+AGG 0.351990 8:-31104192 None:intergenic
ATATATAAATATGATTGATT+TGG 0.359387 8:+31105255 MsG0880043816.01.T01:three_prime_UTR
ATCAACCAAAGATTTAGTTT+TGG 0.365207 8:-31105067 None:intergenic
ACCGAGGTTCTCGTTAAGTT+TGG 0.366262 8:-31103948 None:intergenic
GTCGATAAAACCTCAAAATC+TGG 0.370887 8:+31105030 MsG0880043816.01.T01:CDS
TTTACTAGCTCGTCTTCATC+CGG 0.374685 8:+31103511 MsG0880043816.01.T01:CDS
CTGTTCAGGAACATCGCAAC+AGG 0.375964 8:-31104586 None:intergenic
TTAGAAAGTTCTTCAAAGAT+TGG 0.378427 8:+31104621 MsG0880043816.01.T01:CDS
ATGATGGAAGCTGTGTTGTC+TGG 0.398052 8:+31103306 MsG0880043816.01.T01:CDS
ACTCAAATGATAGAGTTATC+AGG 0.399586 8:+31103879 MsG0880043816.01.T01:CDS
AATACTCTTCTATTACTTCT+GGG 0.404813 8:-31100540 None:intergenic
GGCATGACATTACCTTCAAC+TGG 0.408445 8:-31104717 None:intergenic
CGTGCCATGGTTCCTATCTC+TGG 0.411940 8:+31103800 MsG0880043816.01.T01:CDS
TTACTAAAACATGCAGCAAT+AGG 0.415676 8:-31103704 None:intergenic
CTGTTGCGATGTTCCTGAAC+AGG 0.418377 8:+31104587 MsG0880043816.01.T01:CDS
GAACACTTGTTGCGTGAGGC+AGG 0.420528 8:-31103659 None:intergenic
GTGTTTAAGTCAACAATCAT+TGG 0.420732 8:-31103581 None:intergenic
GGTGATGAAGAGTGGGTTGT+TGG 0.425642 8:+31104082 MsG0880043816.01.T01:CDS
GGGCTTCCTTAGGCCCTTCA+AGG 0.426153 8:-31104171 None:intergenic
AAAGAAACAGATACAACAAT+TGG 0.427149 8:-31104223 None:intergenic
CAAAGAGATTGAGGAAAATG+AGG 0.433376 8:+31104312 MsG0880043816.01.T01:CDS
ACACTTTGACCAACATATAC+TGG 0.434902 8:-31103390 None:intergenic
CTTGTAATTGACAGTAAAGA+TGG 0.438078 8:+31103770 MsG0880043816.01.T01:CDS
ACTACTGAACCACCAGAGAT+AGG 0.439225 8:-31103812 None:intergenic
TGAGGAAAATGAGGAGTATG+TGG 0.443627 8:+31104321 MsG0880043816.01.T01:CDS
TTACTAGCTCGTCTTCATCC+GGG 0.444533 8:+31103512 MsG0880043816.01.T01:CDS
TCCTGATTTCAAAGAGATTG+AGG 0.446776 8:+31104303 MsG0880043816.01.T01:CDS
TTGTTGCGTGAGGCAGGGTT+TGG 0.448991 8:-31103653 None:intergenic
GGGATGTCATGAGTGGTAAA+AGG 0.453340 8:+31103459 MsG0880043816.01.T01:CDS
GATGAAGACGAGCTAGTAAA+GGG 0.459913 8:-31103508 None:intergenic
CCAAAGATTACATTGAGAAC+TGG 0.469225 8:+31104269 MsG0880043816.01.T01:CDS
CTCAAAACCATCTCTCTGCT+TGG 0.473149 8:+31103538 MsG0880043816.01.T01:CDS
GAGAGCACAAGATTTACATA+TGG 0.478073 8:+31104122 MsG0880043816.01.T01:CDS
GAATCAGCTGGCTGCAATGA+TGG 0.479058 8:+31103290 MsG0880043816.01.T01:intron
CATCTTGTGAAAATCCTTGA+AGG 0.482006 8:+31104157 MsG0880043816.01.T01:CDS
TCACATACCTTACCAGTCTC+AGG 0.486391 8:-31104370 None:intergenic
GTATGGAAACCTGGTTTATG+TGG 0.490370 8:+31103727 MsG0880043816.01.T01:CDS
GAGTGGAATAGTTTATATCT+GGG 0.493993 8:+31104246 MsG0880043816.01.T01:CDS
ATGCAATCACGAAGGTGCAC+TGG 0.494469 8:+31104041 MsG0880043816.01.T01:CDS
GAGAACCTCGGTGATCTAAA+CGG 0.495173 8:+31103959 MsG0880043816.01.T01:CDS
GATGAAGAGTGGGTTGTTGG+TGG 0.500081 8:+31104085 MsG0880043816.01.T01:CDS
ATGCCACGCTAAATCAATAA+GGG 0.511908 8:-31104191 None:intergenic
GTTGAGAAGTTGAAGGCTGC+AGG 0.512395 8:+31103983 MsG0880043816.01.T01:CDS
TGACCAACATATACTGGTGA+TGG 0.514154 8:-31103384 None:intergenic
CGAGCTAGTAAAGGGGTTTG+CGG 0.516700 8:-31103500 None:intergenic
GTTGTATCTGTTTCTTTGAG+TGG 0.520343 8:+31104229 MsG0880043816.01.T01:CDS
ACATCGCAACAGGGAGATGC+TGG 0.520821 8:-31104576 None:intergenic
GAGGCAGGGTTTGGTCCACT+TGG 0.522870 8:-31103644 None:intergenic
AAATCAATAAGGGCTTCCTT+AGG 0.523475 8:-31104181 None:intergenic
GATACAACAATTGGACGTAC+AGG 0.524448 8:-31104214 None:intergenic
GGATGAAGACGAGCTAGTAA+AGG 0.525546 8:-31103509 None:intergenic
ATATCAGAGTCGCTGAAAGC+AGG 0.527495 8:-31104528 None:intergenic
TGAAGAACATTGTATTCAGC+AGG 0.527995 8:+31103834 MsG0880043816.01.T01:CDS
GTTGGTGGTTCTGCTAGTAA+AGG 0.529338 8:+31104100 MsG0880043816.01.T01:CDS
AACTCCAACACCTTCTCTGA+TGG 0.531649 8:-31104994 None:intergenic
AGAAAGTTCTTCAAAGATTG+GGG 0.535995 8:+31104623 MsG0880043816.01.T01:CDS
CATGCCTCAAGTCCAGTTGA+AGG 0.538226 8:+31104705 MsG0880043816.01.T01:CDS
TGATGGAAGCTGTGTTGTCT+GGG 0.542561 8:+31103307 MsG0880043816.01.T01:CDS
TCACGCAACAAGTGTTCTGA+TGG 0.542864 8:+31103665 MsG0880043816.01.T01:CDS
GTTGATGAGAGCAATGGTAA+TGG 0.547411 8:+31105084 MsG0880043816.01.T01:CDS
AACACTTGTTGCGTGAGGCA+GGG 0.547477 8:-31103658 None:intergenic
TTTGATTTGAATCCTGAGAC+TGG 0.549359 8:+31104358 MsG0880043816.01.T01:CDS
ATGTTCCTGAACAGGAAGAC+AGG 0.549444 8:+31104595 MsG0880043816.01.T01:CDS
AAACGGTGTTGAGAAGTTGA+AGG 0.549513 8:+31103976 MsG0880043816.01.T01:CDS
AGAGCACAAGATTTACATAT+GGG 0.555323 8:+31104123 MsG0880043816.01.T01:CDS
GAAAATCCTTGAAGGGCCTA+AGG 0.556664 8:+31104165 MsG0880043816.01.T01:CDS
ATTACCTTCAACTGGACTTG+AGG 0.561076 8:-31104709 None:intergenic
GTTTCAGTGGTGATGAAGAG+TGG 0.563391 8:+31104074 MsG0880043816.01.T01:CDS
TTTGAATCCTGAGACTGGTA+AGG 0.566472 8:+31104363 MsG0880043816.01.T01:CDS
TACTAGCTCGTCTTCATCCG+GGG 0.567258 8:+31103513 MsG0880043816.01.T01:CDS
AAGCTCTTTAGCAATGCCCC+TGG 0.567723 8:-31103339 None:intergenic
TACCACTCATGACATCCCAC+AGG 0.572721 8:-31103454 None:intergenic
GATTATGAAGATCCGTTGCA+AGG 0.573855 8:+31100511 MsG0880043816.01.T01:CDS
AGATGGCGAGGTGCGTGCCA+TGG 0.575964 8:+31103787 MsG0880043816.01.T01:CDS
CTTCAACTGGACTTGAGGCA+TGG 0.575992 8:-31104704 None:intergenic
ATTGGGGACAGCAATAACTC+TGG 0.576784 8:+31104639 MsG0880043816.01.T01:CDS
TGGAAGGCACCCTGTTTCAG+TGG 0.579970 8:+31104061 MsG0880043816.01.T01:CDS
ACATGCAGCAATAGGTGTGA+AGG 0.580009 8:-31103696 None:intergenic
ATTTACATATGGGATAGAGC+TGG 0.580981 8:+31104133 MsG0880043816.01.T01:CDS
GGACACGCCAAGCAGAGAGA+TGG 0.582568 8:-31103545 None:intergenic
ATTATTTACAGATGATGCTG+TGG 0.585458 8:+31104945 MsG0880043816.01.T01:intron
CTCCCATCACCAGTATATGT+TGG 0.587070 8:+31103381 MsG0880043816.01.T01:CDS
TCGAGTTTCCCACATAAACC+AGG 0.588345 8:-31103736 None:intergenic
GACCAACATATACTGGTGAT+GGG 0.590282 8:-31103383 None:intergenic
ATCTGATGTCAATGAAGATG+AGG 0.592161 8:+31104476 MsG0880043816.01.T01:CDS
TTTCAGTGGTGATGAAGAGT+GGG 0.592635 8:+31104075 MsG0880043816.01.T01:CDS
ATAGAAGAGTATTTGGAACA+TGG 0.594969 8:+31100550 MsG0880043816.01.T01:CDS
TAGATAACATAGCTCTTCCT+CGG 0.597086 8:-31104553 None:intergenic
AACATTGTATTCAGCAGGAA+CGG 0.597939 8:+31103839 MsG0880043816.01.T01:CDS
ATCTTGTGAAAATCCTTGAA+GGG 0.602213 8:+31104158 MsG0880043816.01.T01:CDS
ATCAGAACACTTGTTGCGTG+AGG 0.606314 8:-31103663 None:intergenic
CTATATCAAATCAAACACAT+AGG 0.607720 8:-31105350 None:intergenic
GAAACCATCAGAGAAGGTGT+TGG 0.608768 8:+31104990 MsG0880043816.01.T01:CDS
TATGGAAACCTGGTTTATGT+GGG 0.609917 8:+31103728 MsG0880043816.01.T01:CDS
GCCATGGTTCCTATCTCTGG+TGG 0.613251 8:+31103803 MsG0880043816.01.T01:CDS
TGACAAGTCGTTATCCCTGT+GGG 0.614779 8:+31103439 MsG0880043816.01.T01:CDS
TGACATTGTGACAGTCGAGA+AGG 0.620507 8:+31104503 MsG0880043816.01.T01:CDS
AAAGCGGAAACCATCAGAGA+AGG 0.621405 8:+31104984 MsG0880043816.01.T01:CDS
TTGATATAGAGCAAAGCCAA+TGG 0.626277 8:+31105364 MsG0880043816.01.T01:three_prime_UTR
CTGACAAGTCGTTATCCCTG+TGG 0.627369 8:+31103438 MsG0880043816.01.T01:CDS
GTTTATGTGGGAAACTCGAA+AGG 0.631466 8:+31103740 MsG0880043816.01.T01:CDS
TGATTGCATCTTGAAACTCA+CGG 0.633891 8:-31104027 None:intergenic
AATTAAGTGTAACAAATGTG+TGG 0.634246 8:-31105397 None:intergenic
ATCATTGGAGCACATGAGAG+AGG 0.635797 8:-31103566 None:intergenic
TTATTTACAGATGATGCTGT+GGG 0.638305 8:+31104946 MsG0880043816.01.T01:intron
TCTTCATCACCACTGAAACA+GGG 0.640101 8:-31104070 None:intergenic
TCTGTCTCTGAGAAACCAAG+TGG 0.649281 8:+31103629 MsG0880043816.01.T01:CDS
ACCACTCATGACATCCCACA+GGG 0.650263 8:-31103453 None:intergenic
TCTGGGAAATCACCTTGCAA+CGG 0.654009 8:-31100523 None:intergenic
AAGCCCTTATTGATTTAGCG+TGG 0.655079 8:+31104188 MsG0880043816.01.T01:CDS
TGCAGCAATAGGTGTGAAGG+AGG 0.657772 8:-31103693 None:intergenic
AATCACGAAGGTGCACTGGA+AGG 0.658692 8:+31104045 MsG0880043816.01.T01:CDS
AGTATATGTTGGTCAAAGTG+TGG 0.660275 8:+31103392 MsG0880043816.01.T01:CDS
CAGCGACTCTGATATGTCCG+AGG 0.661449 8:+31104536 MsG0880043816.01.T01:CDS
TCTTTGGTTGATGAGAGCAA+TGG 0.672367 8:+31105078 MsG0880043816.01.T01:CDS
ACCACCAGAGATAGGAACCA+TGG 0.676109 8:-31103804 None:intergenic
AATTGACAGTAAAGATGGCG+AGG 0.678617 8:+31103775 MsG0880043816.01.T01:CDS
TGTTCAGGAACATCGCAACA+GGG 0.685237 8:-31104585 None:intergenic
TCCCTGTGGGATGTCATGAG+TGG 0.693869 8:+31103452 MsG0880043816.01.T01:CDS
TGTATTGCTTTCAATCGTCG+CGG 0.697076 8:+31100583 MsG0880043816.01.T01:CDS
GAACACGAATTAAAAGAAAG+CGG 0.698073 8:+31104968 MsG0880043816.01.T01:CDS
GCCAAACTTAACGAGAACCT+CGG 0.703007 8:+31103947 MsG0880043816.01.T01:CDS
ATGAAGACGAGCTAGTAAAG+GGG 0.710400 8:-31103507 None:intergenic
GTTTCAAGATGCAATCACGA+AGG 0.735993 8:+31104033 MsG0880043816.01.T01:CDS
CAACACCGTTTAGATCACCG+AGG 0.770889 8:-31103964 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAATCATATTTATATA+TGG - Chr8:31105256-31105275 None:intergenic 10.0%
!! ATATATAAATATGATTGATT+TGG + Chr8:31105255-31105274 MsG0880043816.01.T01:three_prime_UTR 10.0%
!! ATAGAAAAATTAAGATTCTT+AGG - Chr8:31104777-31104796 None:intergenic 15.0%
!! GTATTTAATCTGTATATTTA+AGG + Chr8:31102242-31102261 MsG0880043816.01.T01:intron 15.0%
!! TATAAAGTAAATAAGCTTTA+GGG - Chr8:31101982-31102001 None:intergenic 15.0%
!! TGTAGTTATATCAAATTTAT+AGG + Chr8:31100716-31100735 MsG0880043816.01.T01:intron 15.0%
!! TTATAAAGTAAATAAGCTTT+AGG - Chr8:31101983-31102002 None:intergenic 15.0%
!!! AAATTCTAGCATTTTAATTT+GGG + Chr8:31101642-31101661 MsG0880043816.01.T01:intron 15.0%
!!! ACTTTATTTATTTTCATTGT+GGG + Chr8:31103049-31103068 MsG0880043816.01.T01:intron 15.0%
!!! TACTTTATTTATTTTCATTG+TGG + Chr8:31103048-31103067 MsG0880043816.01.T01:intron 15.0%
!! ATGTAGATCTTAGAATATTT+AGG + Chr8:31102219-31102238 MsG0880043816.01.T01:intron 20.0%
!! TAATAATGAACTTTGATCAT+TGG + Chr8:31102019-31102038 MsG0880043816.01.T01:intron 20.0%
!! TCATTACATTACAATAGAAT+TGG - Chr8:31102621-31102640 None:intergenic 20.0%
!! TGATAAAAAGATTAGAAGAA+CGG - Chr8:31102891-31102910 None:intergenic 20.0%
!! TGTAGATCTTAGAATATTTA+GGG + Chr8:31102220-31102239 MsG0880043816.01.T01:intron 20.0%
!! TTATATTGTATTAACACACA+TGG - Chr8:31102090-31102109 None:intergenic 20.0%
!!! ATAAACTTTATTCTGTTTTC+TGG + Chr8:31102594-31102613 MsG0880043816.01.T01:intron 20.0%
!!! CAAATTCTAGCATTTTAATT+TGG + Chr8:31101641-31101660 MsG0880043816.01.T01:intron 20.0%
!!! GGTATTTTCAAAAAATCATT+AGG + Chr8:31102769-31102788 MsG0880043816.01.T01:intron 20.0%
!!! TAAATATTCTAAGATCTACA+TGG - Chr8:31102220-31102239 None:intergenic 20.0%
!!! TTCATTAAACTTTAAAGTAG+TGG + Chr8:31102124-31102143 MsG0880043816.01.T01:intron 20.0%
!!! TTCTTTCCTTTTCAATTTTA+TGG + Chr8:31104419-31104438 MsG0880043816.01.T01:intron 20.0%
!!! TTGCTGATTAAAAAAAAGAA+GGG + Chr8:31101447-31101466 MsG0880043816.01.T01:intron 20.0%
!!! TTTGCTGATTAAAAAAAAGA+AGG + Chr8:31101446-31101465 MsG0880043816.01.T01:intron 20.0%
! AAAGAAACAGATACAACAAT+TGG - Chr8:31104226-31104245 None:intergenic 25.0%
! AAATACTCTTCTATTACTTC+TGG - Chr8:31100544-31100563 None:intergenic 25.0%
! AAGAACCAAAACTAAATCTT+TGG + Chr8:31105062-31105081 MsG0880043816.01.T01:CDS 25.0%
! AATACTCTTCTATTACTTCT+GGG - Chr8:31100543-31100562 None:intergenic 25.0%
! AATTATAGCCATAACTACAA+GGG - Chr8:31102328-31102347 None:intergenic 25.0%
! ATTTGATAAATTGAATCAGC+TGG + Chr8:31103278-31103297 MsG0880043816.01.T01:intron 25.0%
! CATAACTTGAGAGAAAAATT+GGG - Chr8:31101950-31101969 None:intergenic 25.0%
! CTATATCAAATCAAACACAT+AGG - Chr8:31105353-31105372 None:intergenic 25.0%
! CTTGAAACTTTACTGTATAA+TGG + Chr8:31101135-31101154 MsG0880043816.01.T01:intron 25.0%
! GTAGTTGACAATAAAGAAAT+AGG - Chr8:31102918-31102937 None:intergenic 25.0%
! GTTTGAACCTTATGAATATT+CGG + Chr8:31100872-31100891 MsG0880043816.01.T01:intron 25.0%
! TAAATCTATACCATCGTTAA+TGG - Chr8:31102841-31102860 None:intergenic 25.0%
! TAAATTTGCATTTGAATGTG+TGG + Chr8:31103166-31103185 MsG0880043816.01.T01:intron 25.0%
! TAGAAAGTTCTTCAAAGATT+GGG + Chr8:31104622-31104641 MsG0880043816.01.T01:CDS 25.0%
! TCATCTGTAAATAATGTTGA+AGG - Chr8:31104940-31104959 None:intergenic 25.0%
! TCTATATCACATTGATACTA+GGG + Chr8:31102551-31102570 MsG0880043816.01.T01:intron 25.0%
! TGAATTCCTTGTAGTTATTA+GGG + Chr8:31100970-31100989 MsG0880043816.01.T01:intron 25.0%
! TGATAGTATGGAAAGTAAAA+AGG + Chr8:31102681-31102700 MsG0880043816.01.T01:intron 25.0%
! TTAGAAAGTTCTTCAAAGAT+TGG + Chr8:31104621-31104640 MsG0880043816.01.T01:CDS 25.0%
! TTGAGACCATAAAATTGAAA+AGG - Chr8:31104428-31104447 None:intergenic 25.0%
! TTTGAACCTTATGAATATTC+GGG + Chr8:31100873-31100892 MsG0880043816.01.T01:intron 25.0%
!! AAATTTATAGGATTTTACCG+AGG + Chr8:31100728-31100747 MsG0880043816.01.T01:intron 25.0%
!! CCTAACATTTTTCCTAATTA+GGG - Chr8:31102279-31102298 None:intergenic 25.0%
!! GTATACTCAGAAAGTTTTTA+CGG - Chr8:31103031-31103050 None:intergenic 25.0%
!! TCATTGGTTATGAATATCAT+TGG + Chr8:31102035-31102054 MsG0880043816.01.T01:intron 25.0%
!! TCCTAACATTTTTCCTAATT+AGG - Chr8:31102280-31102299 None:intergenic 25.0%
!! TCTGTATATTTAAGGTCAAT+TGG + Chr8:31102250-31102269 MsG0880043816.01.T01:intron 25.0%
!! TTGCTATTGATATGATAGTA+TGG + Chr8:31102669-31102688 MsG0880043816.01.T01:intron 25.0%
!!! AAAGGTATTGTTTATGACAA+TGG + Chr8:31102699-31102718 MsG0880043816.01.T01:intron 25.0%
!!! AGAAGTAATAGAAGAGTATT+TGG + Chr8:31100543-31100562 MsG0880043816.01.T01:CDS 25.0%
!!! ATCAACCAAAGATTTAGTTT+TGG - Chr8:31105070-31105089 None:intergenic 25.0%
!!! TAAATAAGCTTTAGGGAAAA+AGG - Chr8:31101975-31101994 None:intergenic 25.0%
!!! TGTTACAAGCATATTTTGAA+AGG - Chr8:31104741-31104760 None:intergenic 25.0%
!!! TTTTTTGAAAATACCGAAGT+TGG - Chr8:31102764-31102783 None:intergenic 25.0%
AAACTCATCTCAAAAGGTTT+AGG - Chr8:31102940-31102959 None:intergenic 30.0%
AAGGAACAAACACAATATAG+GGG - Chr8:31101377-31101396 None:intergenic 30.0%
ACAAGGAACAAACACAATAT+AGG - Chr8:31101379-31101398 None:intergenic 30.0%
ACCCACAAATTGGATAAAAA+CGG - Chr8:31101269-31101288 None:intergenic 30.0%
ACTCAAATGATAGAGTTATC+AGG + Chr8:31103879-31103898 MsG0880043816.01.T01:CDS 30.0%
AGAAAGTTCTTCAAAGATTG+GGG + Chr8:31104623-31104642 MsG0880043816.01.T01:CDS 30.0%
AGAGCACAAGATTTACATAT+GGG + Chr8:31104123-31104142 MsG0880043816.01.T01:CDS 30.0%
AGTATCAATGTGATATAGAG+CGG - Chr8:31102550-31102569 None:intergenic 30.0%
ATCTTGTGAAAATCCTTGAA+GGG + Chr8:31104158-31104177 MsG0880043816.01.T01:CDS 30.0%
ATTATTTACAGATGATGCTG+TGG + Chr8:31104945-31104964 MsG0880043816.01.T01:intron 30.0%
CAAGAAACCTAAACTCATAA+AGG - Chr8:31104825-31104844 None:intergenic 30.0%
CAAGGAACAAACACAATATA+GGG - Chr8:31101378-31101397 None:intergenic 30.0%
CAATTATAGCCATAACTACA+AGG - Chr8:31102329-31102348 None:intergenic 30.0%
CCAAATAAAAACAGTGTGAA+TGG - Chr8:31101111-31101130 None:intergenic 30.0%
CCATAACTTGAGAGAAAAAT+TGG - Chr8:31101951-31101970 None:intergenic 30.0%
CCCTAATTAGGAAAAATGTT+AGG + Chr8:31102276-31102295 MsG0880043816.01.T01:intron 30.0%
CTCTATATCACATTGATACT+AGG + Chr8:31102550-31102569 MsG0880043816.01.T01:intron 30.0%
CTTGTAATTGACAGTAAAGA+TGG + Chr8:31103770-31103789 MsG0880043816.01.T01:CDS 30.0%
GAACACGAATTAAAAGAAAG+CGG + Chr8:31104968-31104987 MsG0880043816.01.T01:CDS 30.0%
GAATGACAACAGATTGTAAA+TGG + Chr8:31105132-31105151 MsG0880043816.01.T01:exon 30.0%
GAATTCCTTGTAGTTATTAG+GGG + Chr8:31100971-31100990 MsG0880043816.01.T01:intron 30.0%
GAGTGGAATAGTTTATATCT+GGG + Chr8:31104246-31104265 MsG0880043816.01.T01:CDS 30.0%
GCTATAATTGATGCTGAATT+AGG + Chr8:31102339-31102358 MsG0880043816.01.T01:intron 30.0%
GTGAATTCCTTGTAGTTATT+AGG + Chr8:31100969-31100988 MsG0880043816.01.T01:intron 30.0%
GTGTTTAAGTCAACAATCAT+TGG - Chr8:31103584-31103603 None:intergenic 30.0%
TAAGGTATGTGAACGTTATA+TGG + Chr8:31104381-31104400 MsG0880043816.01.T01:intron 30.0%
TATAGCTGTATAGTCTATAG+CGG - Chr8:31102155-31102174 None:intergenic 30.0%
TATTCTCCTTCTATGCTAAT+TGG - Chr8:31101885-31101904 None:intergenic 30.0%
TGAGTGGAATAGTTTATATC+TGG + Chr8:31104245-31104264 MsG0880043816.01.T01:CDS 30.0%
TTACTAAAACATGCAGCAAT+AGG - Chr8:31103707-31103726 None:intergenic 30.0%
TTAGGCTGTAAACATTCAAA+TGG + Chr8:31102787-31102806 MsG0880043816.01.T01:intron 30.0%
TTAGTGAGTGTATATCTTTC+TGG + Chr8:31103093-31103112 MsG0880043816.01.T01:intron 30.0%
TTATTTACAGATGATGCTGT+GGG + Chr8:31104946-31104965 MsG0880043816.01.T01:intron 30.0%
! ACTATACAGCTATAGCATTT+TGG + Chr8:31102161-31102180 MsG0880043816.01.T01:intron 30.0%
! CCAATTTTTCTCTCAAGTTA+TGG + Chr8:31101948-31101967 MsG0880043816.01.T01:intron 30.0%
! TTAAATTCTGAGAACAGCAT+GGG - Chr8:31104848-31104867 None:intergenic 30.0%
! TTAGCAAATTTTCATCAGGT+GGG + Chr8:31105224-31105243 MsG0880043816.01.T01:three_prime_UTR 30.0%
! TTGCTTAGCAAATTTTCATC+AGG + Chr8:31105220-31105239 MsG0880043816.01.T01:three_prime_UTR 30.0%
! TTTAAATTCTGAGAACAGCA+TGG - Chr8:31104849-31104868 None:intergenic 30.0%
! TTTTACCGAGGTTTATATTG+TGG + Chr8:31100740-31100759 MsG0880043816.01.T01:intron 30.0%
! TTTTAGTAAGTATGGAAACC+TGG + Chr8:31103718-31103737 MsG0880043816.01.T01:CDS 30.0%
!! AATAACTTGAGGGCATATTT+TGG - Chr8:31101087-31101106 None:intergenic 30.0%
!! AGTTTGGTTTGGAAAGAATT+AGG + Chr8:31100680-31100699 MsG0880043816.01.T01:intron 30.0%
!! ATAGAAGAGTATTTGGAACA+TGG + Chr8:31100550-31100569 MsG0880043816.01.T01:CDS 30.0%
!!! CCATTCACACTGTTTTTATT+TGG + Chr8:31101108-31101127 MsG0880043816.01.T01:intron 30.0%
!!! TAAACCTTTTGAGATGAGTT+TGG + Chr8:31102939-31102958 MsG0880043816.01.T01:intron 30.0%
AAATCAATAAGGGCTTCCTT+AGG - Chr8:31104184-31104203 None:intergenic 35.0%
AACATTGTATTCAGCAGGAA+CGG + Chr8:31103839-31103858 MsG0880043816.01.T01:CDS 35.0%
AATTTCCGTAGTTTCTGTCA+AGG + Chr8:31102444-31102463 MsG0880043816.01.T01:intron 35.0%
ACACTTTGACCAACATATAC+TGG - Chr8:31103393-31103412 None:intergenic 35.0%
AGTAACATGAGTGAGAAAGT+TGG - Chr8:31103256-31103275 None:intergenic 35.0%
AGTATATGTTGGTCAAAGTG+TGG + Chr8:31103392-31103411 MsG0880043816.01.T01:CDS 35.0%
ATCTGATGTCAATGAAGATG+AGG + Chr8:31104476-31104495 MsG0880043816.01.T01:CDS 35.0%
ATGCCACGCTAAATCAATAA+GGG - Chr8:31104194-31104213 None:intergenic 35.0%
ATGTGCACTTTGTAAGTCTT+GGG + Chr8:31101305-31101324 MsG0880043816.01.T01:intron 35.0%
ATTTACATATGGGATAGAGC+TGG + Chr8:31104133-31104152 MsG0880043816.01.T01:CDS 35.0%
CAAAACATTGAGCTTGAATC+TGG + Chr8:31101494-31101513 MsG0880043816.01.T01:intron 35.0%
CAAAGAGATTGAGGAAAATG+AGG + Chr8:31104312-31104331 MsG0880043816.01.T01:CDS 35.0%
CAATCGTGTTAATCTGCAAT+TGG - Chr8:31102406-31102425 None:intergenic 35.0%
CAATTGCAGATTAACACGAT+TGG + Chr8:31102404-31102423 MsG0880043816.01.T01:intron 35.0%
CAGAAAAAACACACCCAAAT+CGG - Chr8:31101208-31101227 None:intergenic 35.0%
CAGAAACCCGAATATTCATA+AGG - Chr8:31100882-31100901 None:intergenic 35.0%
CATCTTGTGAAAATCCTTGA+AGG + Chr8:31104157-31104176 MsG0880043816.01.T01:CDS 35.0%
CCAAAGATTACATTGAGAAC+TGG + Chr8:31104269-31104288 MsG0880043816.01.T01:CDS 35.0%
CCAGTTCTCAATGTAATCTT+TGG - Chr8:31104272-31104291 None:intergenic 35.0%
CTGTTAATTGCTACAGAGAT+AGG - Chr8:31101824-31101843 None:intergenic 35.0%
GATTAACACCCTTGTAGTTA+TGG + Chr8:31102317-31102336 MsG0880043816.01.T01:intron 35.0%
GGAAAAAAACACCCACAAAT+TGG - Chr8:31101279-31101298 None:intergenic 35.0%
GTCGATAAAACCTCAAAATC+TGG + Chr8:31105030-31105049 MsG0880043816.01.T01:CDS 35.0%
TACTGTGACAGCAACAATAA+TGG + Chr8:31100850-31100869 MsG0880043816.01.T01:intron 35.0%
TAGATAACATAGCTCTTCCT+CGG - Chr8:31104556-31104575 None:intergenic 35.0%
TATGGAAACCTGGTTTATGT+GGG + Chr8:31103728-31103747 MsG0880043816.01.T01:CDS 35.0%
TATTCCTCTGCTATGCTATT+TGG - Chr8:31101025-31101044 None:intergenic 35.0%
TCAAACCTTGACAGAAACTA+CGG - Chr8:31102452-31102471 None:intergenic 35.0%
TCATTGTGGGATTAGATTTC+AGG + Chr8:31103062-31103081 MsG0880043816.01.T01:intron 35.0%
TCCTGATTTCAAAGAGATTG+AGG + Chr8:31104303-31104322 MsG0880043816.01.T01:CDS 35.0%
TCTACATGGTCAATGAAGAA+TGG - Chr8:31102206-31102225 None:intergenic 35.0%
TCTCCACACAAAAATTTACC+AGG - Chr8:31101719-31101738 None:intergenic 35.0%
TGAAGAACATTGTATTCAGC+AGG + Chr8:31103834-31103853 MsG0880043816.01.T01:CDS 35.0%
TGATTGCATCTTGAAACTCA+CGG - Chr8:31104030-31104049 None:intergenic 35.0%
TGTGAATGGCAATAACTTGA+GGG - Chr8:31101097-31101116 None:intergenic 35.0%
TTCATATCCTTGCAGGTAAA+AGG + Chr8:31104453-31104472 MsG0880043816.01.T01:intron 35.0%
TTCTGTGATACCATTAACGA+TGG + Chr8:31102828-31102847 MsG0880043816.01.T01:intron 35.0%
TTGACCAAACTCATCTCAAA+AGG - Chr8:31102946-31102965 None:intergenic 35.0%
TTGATATAGAGCAAAGCCAA+TGG + Chr8:31105364-31105383 MsG0880043816.01.T01:three_prime_UTR 35.0%
TTGCATTTGAATGTGTGGAT+TGG + Chr8:31103171-31103190 MsG0880043816.01.T01:intron 35.0%
! AAAATACCCTTGCTGTAGTT+TGG + Chr8:31100664-31100683 MsG0880043816.01.T01:intron 35.0%
! AGTGCTCTAACTTCATCTTT+TGG - Chr8:31103926-31103945 None:intergenic 35.0%
! ATACAGCTATAGCATTTTGG+TGG + Chr8:31102164-31102183 MsG0880043816.01.T01:intron 35.0%
! CAAGGTTTGAAGTGTGTATA+AGG + Chr8:31102462-31102481 MsG0880043816.01.T01:intron 35.0%
! CTTAGCAAATTTTCATCAGG+TGG + Chr8:31105223-31105242 MsG0880043816.01.T01:three_prime_UTR 35.0%
! GAGAGCACAAGATTTACATA+TGG + Chr8:31104122-31104141 MsG0880043816.01.T01:CDS 35.0%
! GTTGTATCTGTTTCTTTGAG+TGG + Chr8:31104229-31104248 MsG0880043816.01.T01:CDS 35.0%
! GTTTGAAGTGTGTATAAGGA+GGG + Chr8:31102466-31102485 MsG0880043816.01.T01:intron 35.0%
! GTTTTACGGTAATCCAACTT+CGG + Chr8:31102748-31102767 MsG0880043816.01.T01:intron 35.0%
! TAACTCTGGATCACCATTTT+CGG + Chr8:31104653-31104672 MsG0880043816.01.T01:CDS 35.0%
! TTTGCTATCACTTCCGAAAA+TGG - Chr8:31104669-31104688 None:intergenic 35.0%
! TTTTCGGAAGTGATAGCAAA+TGG + Chr8:31104669-31104688 MsG0880043816.01.T01:CDS 35.0%
!! CTATAGCATTTTGGTGGTTT+TGG + Chr8:31102170-31102189 MsG0880043816.01.T01:intron 35.0%
!! GAGATTTGTTCCTCGTTTTA+CGG + Chr8:31102734-31102753 MsG0880043816.01.T01:intron 35.0%
!! TAAGCTGATTTTGTACGCAA+TGG + Chr8:31101741-31101760 MsG0880043816.01.T01:intron 35.0%
!! TCCTCAATCTCTTTGAAATC+AGG - Chr8:31104307-31104326 None:intergenic 35.0%
!! TGATGATTTGCCAGATTTTG+AGG - Chr8:31105043-31105062 None:intergenic 35.0%
!! TGGCTTTTTCCAATGATGAT+GGG + Chr8:31101608-31101627 MsG0880043816.01.T01:intron 35.0%
!! TTTGATTTGAATCCTGAGAC+TGG + Chr8:31104358-31104377 MsG0880043816.01.T01:CDS 35.0%
!!! AAACTACAGCAAGGGTATTT+TGG - Chr8:31100665-31100684 None:intergenic 35.0%
!!! AGCCGTTTTTATCCAATTTG+TGG + Chr8:31101264-31101283 MsG0880043816.01.T01:intron 35.0%
!!! ATTTGGGTGTGTTTTTTCTG+TGG + Chr8:31101208-31101227 MsG0880043816.01.T01:intron 35.0%
!!! GCCGTTTTTATCCAATTTGT+GGG + Chr8:31101265-31101284 MsG0880043816.01.T01:intron 35.0%
!!! GCTGCATGTTTTAGTAAGTA+TGG + Chr8:31103710-31103729 MsG0880043816.01.T01:CDS 35.0%
AAAAACACACCCAAATCGGT+AGG - Chr8:31101204-31101223 None:intergenic 40.0%
AAAAACCTGTCTTCCTGTTC+AGG - Chr8:31104603-31104622 None:intergenic 40.0%
AACCAAGTTCATATCCTTGC+AGG + Chr8:31104446-31104465 MsG0880043816.01.T01:intron 40.0%
AACTGTTGAACCACTTTGTG+AGG + Chr8:31104799-31104818 MsG0880043816.01.T01:intron 40.0%
AATTGACAGTAAAGATGGCG+AGG + Chr8:31103775-31103794 MsG0880043816.01.T01:CDS 40.0%
AATTGCTACAGAGATAGGCT+TGG - Chr8:31101819-31101838 None:intergenic 40.0%
ACATGGTCAATGAAGAATGG+CGG - Chr8:31102203-31102222 None:intergenic 40.0%
ACCGAAATTCAGAAAGGGAA+AGG - Chr8:31101352-31101371 None:intergenic 40.0%
ACGGAAATTGAGACCTTACA+GGG - Chr8:31102433-31102452 None:intergenic 40.0%
AGCTTGAATCTGGACTTGAT+TGG + Chr8:31101504-31101523 MsG0880043816.01.T01:intron 40.0%
AGTTGGATTACCGTAAAACG+AGG - Chr8:31102747-31102766 None:intergenic 40.0%
ATGAAGACGAGCTAGTAAAG+GGG - Chr8:31103510-31103529 None:intergenic 40.0%
ATTACCTTCAACTGGACTTG+AGG - Chr8:31104712-31104731 None:intergenic 40.0%
ATTTACCAGGCTGCTCTATT+TGG - Chr8:31101706-31101725 None:intergenic 40.0%
CAAGACTTACAAAGTGCACA+TGG - Chr8:31101306-31101325 None:intergenic 40.0%
CACTTTGTAAGTCTTGGGAT+TGG + Chr8:31101310-31101329 MsG0880043816.01.T01:intron 40.0%
CATGTGCACTTTGTAAGTCT+TGG + Chr8:31101304-31101323 MsG0880043816.01.T01:intron 40.0%
CGCAACCACAATATAAACCT+CGG - Chr8:31100748-31100767 None:intergenic 40.0%
CTGTATAGTCTATAGCGGTA+TGG - Chr8:31102150-31102169 None:intergenic 40.0%
CTTCACATCGTTGAGAATTG+TGG + Chr8:31100776-31100795 MsG0880043816.01.T01:intron 40.0%
GACCAACATATACTGGTGAT+GGG - Chr8:31103386-31103405 None:intergenic 40.0%
GATACAACAATTGGACGTAC+AGG - Chr8:31104217-31104236 None:intergenic 40.0%
GATGAAGACGAGCTAGTAAA+GGG - Chr8:31103511-31103530 None:intergenic 40.0%
GATGCCACGCTAAATCAATA+AGG - Chr8:31104195-31104214 None:intergenic 40.0%
GATTATGAAGATCCGTTGCA+AGG + Chr8:31100511-31100530 MsG0880043816.01.T01:CDS 40.0%
GCAATTAACAGCTCCTATAG+TGG + Chr8:31101833-31101852 MsG0880043816.01.T01:intron 40.0%
GCCTTTCCCTTTCTGAATTT+CGG + Chr8:31101348-31101367 MsG0880043816.01.T01:intron 40.0%
GCTTGAATCTGGACTTGATT+GGG + Chr8:31101505-31101524 MsG0880043816.01.T01:intron 40.0%
GGGTTTCTGCTTATGATTGT+GGG + Chr8:31100893-31100912 MsG0880043816.01.T01:intron 40.0%
GGTTTATATTGTGGTTGCGT+CGG + Chr8:31100749-31100768 MsG0880043816.01.T01:intron 40.0%
GTATGGAAACCTGGTTTATG+TGG + Chr8:31103727-31103746 MsG0880043816.01.T01:CDS 40.0%
GTCAATTGGTTGCCCTAATT+AGG + Chr8:31102264-31102283 MsG0880043816.01.T01:intron 40.0%
GTGTGAATGGCAATAACTTG+AGG - Chr8:31101098-31101117 None:intergenic 40.0%
GTTTATGTGGGAAACTCGAA+AGG + Chr8:31103740-31103759 MsG0880043816.01.T01:CDS 40.0%
GTTTCAAGATGCAATCACGA+AGG + Chr8:31104033-31104052 MsG0880043816.01.T01:CDS 40.0%
TACCTGCAAGGATATGAACT+TGG - Chr8:31104451-31104470 None:intergenic 40.0%
TACGGAAATTGAGACCTTAC+AGG - Chr8:31102434-31102453 None:intergenic 40.0%
TCACAAGAACTTCACTGTAG+CGG - Chr8:31101061-31101080 None:intergenic 40.0%
TCCAAACCAAACTACAGCAA+GGG - Chr8:31100673-31100692 None:intergenic 40.0%
TCTTCATCACCACTGAAACA+GGG - Chr8:31104073-31104092 None:intergenic 40.0%
TGACCAACATATACTGGTGA+TGG - Chr8:31103387-31103406 None:intergenic 40.0%
TGTATTGCTTTCAATCGTCG+CGG + Chr8:31100583-31100602 MsG0880043816.01.T01:CDS 40.0%
TGTGAGGCCTTTATGAGTTT+AGG + Chr8:31104815-31104834 MsG0880043816.01.T01:intron 40.0%
TTAATCTGCAATTGGCAGAG+TGG - Chr8:31102398-31102417 None:intergenic 40.0%
TTACAAAGTGCACATGGTCA+AGG - Chr8:31101300-31101319 None:intergenic 40.0%
TTCCAAACCAAACTACAGCA+AGG - Chr8:31100674-31100693 None:intergenic 40.0%
TTGTGGGATTAGATTTCAGG+AGG + Chr8:31103065-31103084 MsG0880043816.01.T01:intron 40.0%
TTTACTAGCTCGTCTTCATC+CGG + Chr8:31103511-31103530 MsG0880043816.01.T01:CDS 40.0%
TTTGAATCCTGAGACTGGTA+AGG + Chr8:31104363-31104382 MsG0880043816.01.T01:CDS 40.0%
! AAACGGTGTTGAGAAGTTGA+AGG + Chr8:31103976-31103995 MsG0880043816.01.T01:CDS 40.0%
! ATCAGATCCTTTTACCTGCA+AGG - Chr8:31104463-31104482 None:intergenic 40.0%
! CAGCCTGGTAAATTTTTGTG+TGG + Chr8:31101713-31101732 MsG0880043816.01.T01:intron 40.0%
! GCTCTAACTTCATCTTTTGG+AGG - Chr8:31103923-31103942 None:intergenic 40.0%
! GGTTTGAAGTGTGTATAAGG+AGG + Chr8:31102465-31102484 MsG0880043816.01.T01:intron 40.0%
! GTGTGGATAACTTTTGCCAT+TGG - Chr8:31105383-31105402 None:intergenic 40.0%
! GTTGATGAGAGCAATGGTAA+TGG + Chr8:31105084-31105103 MsG0880043816.01.T01:CDS 40.0%
! TGAGGAAAATGAGGAGTATG+TGG + Chr8:31104321-31104340 MsG0880043816.01.T01:CDS 40.0%
! TTTCAGTGGTGATGAAGAGT+GGG + Chr8:31104075-31104094 MsG0880043816.01.T01:CDS 40.0%
!! AAGCCCTTATTGATTTAGCG+TGG + Chr8:31104188-31104207 MsG0880043816.01.T01:CDS 40.0%
!! CAAGGGTGTTAATCTGCAAA+TGG - Chr8:31102311-31102330 None:intergenic 40.0%
!! CTGGCTTTTTCCAATGATGA+TGG + Chr8:31101607-31101626 MsG0880043816.01.T01:intron 40.0%
!! GGCTTTTTCCAATGATGATG+GGG + Chr8:31101609-31101628 MsG0880043816.01.T01:intron 40.0%
!! TCTTTGGTTGATGAGAGCAA+TGG + Chr8:31105078-31105097 MsG0880043816.01.T01:CDS 40.0%
!!! CAGAGTGGATTGTGGATTTT+CGG - Chr8:31102383-31102402 None:intergenic 40.0%
!!! GCTTTTTCCAATGATGATGG+GGG + Chr8:31101610-31101629 MsG0880043816.01.T01:intron 40.0%
!!! TGTCTGGGATTTTGAAACCA+GGG + Chr8:31103322-31103341 MsG0880043816.01.T01:CDS 40.0%
!!! TTGTCTGGGATTTTGAAACC+AGG + Chr8:31103321-31103340 MsG0880043816.01.T01:CDS 40.0%
AAAGCGGAAACCATCAGAGA+AGG + Chr8:31104984-31105003 MsG0880043816.01.T01:CDS 45.0%
AACTCCAACACCTTCTCTGA+TGG - Chr8:31104997-31105016 None:intergenic 45.0%
ACATAGACCCCCATCATCAT+TGG - Chr8:31101620-31101639 None:intergenic 45.0%
ACATGCAGCAATAGGTGTGA+AGG - Chr8:31103699-31103718 None:intergenic 45.0%
ACCGAGGTTCTCGTTAAGTT+TGG - Chr8:31103951-31103970 None:intergenic 45.0%
ACTACTGAACCACCAGAGAT+AGG - Chr8:31103815-31103834 None:intergenic 45.0%
AGAGAGAGTTACCAGCAAGA+AGG - Chr8:31100612-31100631 None:intergenic 45.0%
AGCAGCCCCTAATAACTACA+AGG - Chr8:31100979-31100998 None:intergenic 45.0%
ATATCAGAGTCGCTGAAAGC+AGG - Chr8:31104531-31104550 None:intergenic 45.0%
ATCATTGGAGCACATGAGAG+AGG - Chr8:31103569-31103588 None:intergenic 45.0%
ATGTTCCTGAACAGGAAGAC+AGG + Chr8:31104595-31104614 MsG0880043816.01.T01:CDS 45.0%
ATTGGGGACAGCAATAACTC+TGG + Chr8:31104639-31104658 MsG0880043816.01.T01:CDS 45.0%
CACTATCTATCTCATACCCC+AGG - Chr8:31102513-31102532 None:intergenic 45.0%
CCCAAGAACCCCAAATCTAA+GGG - Chr8:31101242-31101261 None:intergenic 45.0%
CGGGTTTCTGCTTATGATTG+TGG + Chr8:31100892-31100911 MsG0880043816.01.T01:intron 45.0%
CTCAAAACCATCTCTCTGCT+TGG + Chr8:31103538-31103557 MsG0880043816.01.T01:CDS 45.0%
CTCATAAAGGCCTCACAAAG+TGG - Chr8:31104812-31104831 None:intergenic 45.0%
CTCCCATCACCAGTATATGT+TGG + Chr8:31103381-31103400 MsG0880043816.01.T01:CDS 45.0%
CTCTTCATCACCACTGAAAC+AGG - Chr8:31104074-31104093 None:intergenic 45.0%
GAAAATCCTTGAAGGGCCTA+AGG + Chr8:31104165-31104184 MsG0880043816.01.T01:CDS 45.0%
GACTGTGAGTTCCATTGACA+CGG + Chr8:31101547-31101566 MsG0880043816.01.T01:intron 45.0%
GAGAACCTCGGTGATCTAAA+CGG + Chr8:31103959-31103978 MsG0880043816.01.T01:CDS 45.0%
GAGAGAGTTACCAGCAAGAA+GGG - Chr8:31100611-31100630 None:intergenic 45.0%
GCCAAACTTAACGAGAACCT+CGG + Chr8:31103947-31103966 MsG0880043816.01.T01:CDS 45.0%
GGATGAAGACGAGCTAGTAA+AGG - Chr8:31103512-31103531 None:intergenic 45.0%
GGCATGACATTACCTTCAAC+TGG - Chr8:31104720-31104739 None:intergenic 45.0%
GGGATGTCATGAGTGGTAAA+AGG + Chr8:31103459-31103478 MsG0880043816.01.T01:CDS 45.0%
GGGCAACCGAAATTCAGAAA+GGG - Chr8:31101357-31101376 None:intergenic 45.0%
GTTATTAGGGGCTGCTATAG+CGG + Chr8:31100983-31101002 MsG0880043816.01.T01:intron 45.0%
TCACATACCTTACCAGTCTC+AGG - Chr8:31104373-31104392 None:intergenic 45.0%
TCACGCAACAAGTGTTCTGA+TGG + Chr8:31103665-31103684 MsG0880043816.01.T01:CDS 45.0%
TCGAGTTTCCCACATAAACC+AGG - Chr8:31103739-31103758 None:intergenic 45.0%
TCTATGTCTCCTGGATACCT+GGG + Chr8:31102493-31102512 MsG0880043816.01.T01:intron 45.0%
TCTGGGAAATCACCTTGCAA+CGG - Chr8:31100526-31100545 None:intergenic 45.0%
TGACAAGTCGTTATCCCTGT+GGG + Chr8:31103439-31103458 MsG0880043816.01.T01:CDS 45.0%
TGACATTGTGACAGTCGAGA+AGG + Chr8:31104503-31104522 MsG0880043816.01.T01:CDS 45.0%
TGATGGAAGCTGTGTTGTCT+GGG + Chr8:31103307-31103326 MsG0880043816.01.T01:CDS 45.0%
TGTTCAGGAACATCGCAACA+GGG - Chr8:31104588-31104607 None:intergenic 45.0%
TTACTAGCTCGTCTTCATCC+GGG + Chr8:31103512-31103531 MsG0880043816.01.T01:CDS 45.0%
! ACACGATTGGTTACCCTGTA+AGG + Chr8:31102417-31102436 MsG0880043816.01.T01:intron 45.0%
! ACCCTTGCTGTAGTTTGGTT+TGG + Chr8:31100669-31100688 MsG0880043816.01.T01:intron 45.0%
! ATCAGAACACTTGTTGCGTG+AGG - Chr8:31103666-31103685 None:intergenic 45.0%
! ATGATGGAAGCTGTGTTGTC+TGG + Chr8:31103306-31103325 MsG0880043816.01.T01:CDS 45.0%
! CCCTTAGATTTGGGGTTCTT+GGG + Chr8:31101239-31101258 MsG0880043816.01.T01:intron 45.0%
! GAAACCATCAGAGAAGGTGT+TGG + Chr8:31104990-31105009 MsG0880043816.01.T01:CDS 45.0%
! GTTTCAGTGGTGATGAAGAG+TGG + Chr8:31104074-31104093 MsG0880043816.01.T01:CDS 45.0%
! TCCCTTAGATTTGGGGTTCT+TGG + Chr8:31101238-31101257 MsG0880043816.01.T01:intron 45.0%
! TCTGTCTCTGAGAAACCAAG+TGG + Chr8:31103629-31103648 MsG0880043816.01.T01:CDS 45.0%
!! AAGTGCATGAGGGCATTACA+AGG - Chr8:31101396-31101415 None:intergenic 45.0%
!! CAAGCAGAGAGATGGTTTTG+AGG - Chr8:31103540-31103559 None:intergenic 45.0%
!! GTTGGTGGTTCTGCTAGTAA+AGG + Chr8:31104100-31104119 MsG0880043816.01.T01:CDS 45.0%
!! TGTGGAGGCATCATAATCTC+TGG + Chr8:31101588-31101607 MsG0880043816.01.T01:intron 45.0%
!!! GGTGTGTTTTTTCTGTGGTG+CGG + Chr8:31101213-31101232 MsG0880043816.01.T01:intron 45.0%
!!! GTCTGGGATTTTGAAACCAG+GGG + Chr8:31103323-31103342 MsG0880043816.01.T01:CDS 45.0%
!!! TGGGATTGGCTGTTGTTTTG+TGG + Chr8:31101324-31101343 MsG0880043816.01.T01:intron 45.0%
AACACACCCAAATCGGTAGG+CGG - Chr8:31101201-31101220 None:intergenic 50.0%
AAGCTCTTTAGCAATGCCCC+TGG - Chr8:31103342-31103361 None:intergenic 50.0%
ACCACCAGAGATAGGAACCA+TGG - Chr8:31103807-31103826 None:intergenic 50.0%
ACCACTCATGACATCCCACA+GGG - Chr8:31103456-31103475 None:intergenic 50.0%
ACGCTGTGCAATGCCACTAT+AGG - Chr8:31101849-31101868 None:intergenic 50.0%
ACTCACAGTCTTGCAGCAGT+CGG - Chr8:31101537-31101556 None:intergenic 50.0%
ATCTCATACCCCAGGTATCC+AGG - Chr8:31102505-31102524 None:intergenic 50.0%
ATTGTGGTCGAATGACGCAG+TGG + Chr8:31100792-31100811 MsG0880043816.01.T01:intron 50.0%
CAACACCGTTTAGATCACCG+AGG - Chr8:31103967-31103986 None:intergenic 50.0%
CAGCGGCCAATTAGCATAGA+AGG + Chr8:31101876-31101895 MsG0880043816.01.T01:intron 50.0%
CATGCCTCAAGTCCAGTTGA+AGG + Chr8:31104705-31104724 MsG0880043816.01.T01:CDS 50.0%
CCCTCATGCACTTCTTGTGT+GGG + Chr8:31101403-31101422 MsG0880043816.01.T01:intron 50.0%
CCTCATGCACTTCTTGTGTG+GGG + Chr8:31101404-31101423 MsG0880043816.01.T01:intron 50.0%
CGAGCTAGTAAAGGGGTTTG+CGG - Chr8:31103503-31103522 None:intergenic 50.0%
CTATGTCTCCTGGATACCTG+GGG + Chr8:31102494-31102513 MsG0880043816.01.T01:intron 50.0%
CTGACAAGTCGTTATCCCTG+TGG + Chr8:31103438-31103457 MsG0880043816.01.T01:CDS 50.0%
CTGTTCAGGAACATCGCAAC+AGG - Chr8:31104589-31104608 None:intergenic 50.0%
CTGTTGCGATGTTCCTGAAC+AGG + Chr8:31104587-31104606 MsG0880043816.01.T01:CDS 50.0%
CTTCAACTGGACTTGAGGCA+TGG - Chr8:31104707-31104726 None:intergenic 50.0%
GAATCAGCTGGCTGCAATGA+TGG + Chr8:31103290-31103309 MsG0880043816.01.T01:intron 50.0%
GAGGGAAAGTCTATGTCTCC+TGG + Chr8:31102484-31102503 MsG0880043816.01.T01:intron 50.0%
GCAGCCAAATAGCATAGCAG+AGG + Chr8:31101018-31101037 MsG0880043816.01.T01:intron 50.0%
GCCCAAGAACCCCAAATCTA+AGG - Chr8:31101243-31101262 None:intergenic 50.0%
GGGGCAACCGAAATTCAGAA+AGG - Chr8:31101358-31101377 None:intergenic 50.0%
GTCTATGTCTCCTGGATACC+TGG + Chr8:31102492-31102511 MsG0880043816.01.T01:intron 50.0%
GTGCGGTGTCCCTTAGATTT+GGG + Chr8:31101230-31101249 MsG0880043816.01.T01:intron 50.0%
GTTGAGAAGTTGAAGGCTGC+AGG + Chr8:31103983-31104002 MsG0880043816.01.T01:CDS 50.0%
TACCACTCATGACATCCCAC+AGG - Chr8:31103457-31103476 None:intergenic 50.0%
TACTAGCTCGTCTTCATCCG+GGG + Chr8:31103513-31103532 MsG0880043816.01.T01:CDS 50.0%
TGCAGCAATAGGTGTGAAGG+AGG - Chr8:31103696-31103715 None:intergenic 50.0%
TGCGGTGTCCCTTAGATTTG+GGG + Chr8:31101231-31101250 MsG0880043816.01.T01:intron 50.0%
TTCCATTGACACGGCTGCAA+TGG + Chr8:31101556-31101575 MsG0880043816.01.T01:intron 50.0%
TTCTGCCAAATAGAGCAGCC+TGG + Chr8:31101698-31101717 MsG0880043816.01.T01:intron 50.0%
! AACACTTGTTGCGTGAGGCA+GGG - Chr8:31103661-31103680 None:intergenic 50.0%
! AATCACGAAGGTGCACTGGA+AGG + Chr8:31104045-31104064 MsG0880043816.01.T01:CDS 50.0%
! ATGCAATCACGAAGGTGCAC+TGG + Chr8:31104041-31104060 MsG0880043816.01.T01:CDS 50.0%
! CCCACACAAGAAGTGCATGA+GGG - Chr8:31101406-31101425 None:intergenic 50.0%
! TGCACAGCGTTTTTGTGCAG+CGG + Chr8:31101859-31101878 MsG0880043816.01.T01:intron 50.0%
!! AGAGAAGGTGTTGGAGTTGC+AGG + Chr8:31104999-31105018 MsG0880043816.01.T01:CDS 50.0%
!! GATGAAGAGTGGGTTGTTGG+TGG + Chr8:31104085-31104104 MsG0880043816.01.T01:CDS 50.0%
!! GCAATTGGCAGAGTGGATTG+TGG - Chr8:31102391-31102410 None:intergenic 50.0%
!! GGTGATGAAGAGTGGGTTGT+TGG + Chr8:31104082-31104101 MsG0880043816.01.T01:CDS 50.0%
!! TGAGAACCGCCTACCGATTT+GGG + Chr8:31101192-31101211 MsG0880043816.01.T01:intron 50.0%
!!! AGAGATGGTTTTGAGGACCC+CGG - Chr8:31103533-31103552 None:intergenic 50.0%
ACATCGCAACAGGGAGATGC+TGG - Chr8:31104579-31104598 None:intergenic 55.0%
ATGACGCAGTGGCGTTGCAA+TGG + Chr8:31100803-31100822 MsG0880043816.01.T01:intron 55.0%
CAAATCGGTAGGCGGTTCTC+AGG - Chr8:31101193-31101212 None:intergenic 55.0%
CAATGGCGTTGCGATTGTGG+AGG + Chr8:31101573-31101592 MsG0880043816.01.T01:intron 55.0%
CAGCGACTCTGATATGTCCG+AGG + Chr8:31104536-31104555 MsG0880043816.01.T01:CDS 55.0%
CATGCACTTCTTGTGTGGGG+TGG + Chr8:31101407-31101426 MsG0880043816.01.T01:intron 55.0%
CGTGCCATGGTTCCTATCTC+TGG + Chr8:31103800-31103819 MsG0880043816.01.T01:CDS 55.0%
CTGCAATGGCGTTGCGATTG+TGG + Chr8:31101570-31101589 MsG0880043816.01.T01:intron 55.0%
GCCATGGTTCCTATCTCTGG+TGG + Chr8:31103803-31103822 MsG0880043816.01.T01:CDS 55.0%
GCCCTCATGCACTTCTTGTG+TGG + Chr8:31101402-31101421 MsG0880043816.01.T01:intron 55.0%
GGTGCGGTGTCCCTTAGATT+TGG + Chr8:31101229-31101248 MsG0880043816.01.T01:intron 55.0%
TCCCTGTGGGATGTCATGAG+TGG + Chr8:31103452-31103471 MsG0880043816.01.T01:CDS 55.0%
TTGTTGCGTGAGGCAGGGTT+TGG - Chr8:31103656-31103675 None:intergenic 55.0%
! CCCCACACAAGAAGTGCATG+AGG - Chr8:31101407-31101426 None:intergenic 55.0%
! CTGAGAACCGCCTACCGATT+TGG + Chr8:31101191-31101210 MsG0880043816.01.T01:intron 55.0%
! GAACACTTGTTGCGTGAGGC+AGG - Chr8:31103662-31103681 None:intergenic 55.0%
!! TGGAAGGCACCCTGTTTCAG+TGG + Chr8:31104061-31104080 MsG0880043816.01.T01:CDS 55.0%
CAGTGGCGTTGCAATGGCAG+AGG + Chr8:31100809-31100828 MsG0880043816.01.T01:intron 60.0%
CGCCATTGCAGCCGTGTCAA+TGG - Chr8:31101561-31101580 None:intergenic 60.0%
GGACACGCCAAGCAGAGAGA+TGG - Chr8:31103548-31103567 None:intergenic 60.0%
GGGCTTCCTTAGGCCCTTCA+AGG - Chr8:31104174-31104193 None:intergenic 60.0%
! GAGGCAGGGTTTGGTCCACT+TGG - Chr8:31103647-31103666 None:intergenic 60.0%
AGATGGCGAGGTGCGTGCCA+TGG + Chr8:31103787-31103806 MsG0880043816.01.T01:CDS 65.0%
CGTCGCGGTACCCTTCTTGC+TGG + Chr8:31100598-31100617 MsG0880043816.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 31100502 31105408 31100502 ID=MsG0880043816.01;Name=MsG0880043816.01
Chr8 mRNA 31100502 31105408 31100502 ID=MsG0880043816.01.T01;Parent=MsG0880043816.01;Name=MsG0880043816.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0.66|0.75|1|1|1|4|271|543
Chr8 exon 31100502 31100604 31100502 ID=MsG0880043816.01.T01:exon:9292;Parent=MsG0880043816.01.T01
Chr8 exon 31103297 31104384 31103297 ID=MsG0880043816.01.T01:exon:9293;Parent=MsG0880043816.01.T01
Chr8 exon 31104468 31104726 31104468 ID=MsG0880043816.01.T01:exon:9294;Parent=MsG0880043816.01.T01
Chr8 exon 31104956 31105408 31104956 ID=MsG0880043816.01.T01:exon:9295;Parent=MsG0880043816.01.T01
Chr8 CDS 31100502 31100604 31100502 ID=MsG0880043816.01.T01:cds;Parent=MsG0880043816.01.T01
Chr8 CDS 31103297 31104384 31103297 ID=MsG0880043816.01.T01:cds;Parent=MsG0880043816.01.T01
Chr8 CDS 31104468 31104726 31104468 ID=MsG0880043816.01.T01:cds;Parent=MsG0880043816.01.T01
Chr8 CDS 31104956 31105137 31104956 ID=MsG0880043816.01.T01:cds;Parent=MsG0880043816.01.T01
Chr8 three_prime_UTR 31105138 31105408 31105138 ID=MsG0880043816.01.T01:three_prime_utr;Parent=MsG0880043816.01.T01
Gene Sequence

>MsG0880043816.01.T01

ATGGTTTTCGATTATGAAGATCCGTTGCAAGGTGATTTCCCAGAAGTAATAGAAGAGTATTTGGAACATGGAATTATGAAATGTATTGCTTTCAATCGTCGCGCTGGCTGCAATGATGGAAGCTGTGTTGTCTGGGATTTTGAAACCAGGGGCATTGCTAAAGAGCTTCGAGATAATGAATGTTCTTCTCCCATCACCAGTATATGTTGGTCAAAGTGTGGCAATCGAATTCTTGTATCTGCTGCTGACAAGTCGTTATCCCTGTGGGATGTCATGAGTGGTAAAAGGATAACAAGAAGAGTTTTGCCGCAAACCCCTTTACTAGCTCGTCTTCATCCGGGGTCCTCAAAACCATCTCTCTGCTTGGCGTGTCCTCTCTCATGTGCTCCAATGATTGTTGACTTAAACACTGAAAATACAACTTATCTTCAAGTTTCTGTCTCTGAGAAACCAAGTGGACCAAACCCTGCCTCACGCAACAAGTGTTCTGATGGAAGTACCTCCTTCACACCTATTGCTGCATGTTTTAGTAAGTATGGAAACCTGGTTTATGTGGGAAACTCGAAAGGTGAAATTCTTGTAATTGACAGTAAAGATGGCGAGGTGCGTGCCATGGTTCCTATCTCTGGTGGTTCAGTAGTGAAGAACATTGTATTCAGCAGGAACGGACAGTATCTTCTAACAAACTCAAATGATAGAGTTATCAGGATCTATGAAAATCTTCTTCCTCCAAAAGATGAAGTTAGAGCACTAGCCAAACTTAACGAGAACCTCGGTGATCTAAACGGTGTTGAGAAGTTGAAGGCTGCAGGATCAAAATGTTTAACTTTGTTCCGTGAGTTTCAAGATGCAATCACGAAGGTGCACTGGAAGGCACCCTGTTTCAGTGGTGATGAAGAGTGGGTTGTTGGTGGTTCTGCTAGTAAAGGAGAGCACAAGATTTACATATGGGATAGAGCTGGACATCTTGTGAAAATCCTTGAAGGGCCTAAGGAAGCCCTTATTGATTTAGCGTGGCATCCTGTACGTCCAATTGTTGTATCTGTTTCTTTGAGTGGAATAGTTTATATCTGGGCCAAAGATTACATTGAGAACTGGAGTGCTTTTGCTCCTGATTTCAAAGAGATTGAGGAAAATGAGGAGTATGTGGAGCGAGAAGATGAATTTGATTTGAATCCTGAGACTGGTAAGGTAAAAGGATCTGATGTCAATGAAGATGAGGACGTTGACATTGTGACAGTCGAGAAGGATCCTGCTTTCAGCGACTCTGATATGTCCGAGGAAGAGCTATGTTATCTACCAGCATCTCCCTGTTGCGATGTTCCTGAACAGGAAGACAGGTTTTTAGAAAGTTCTTCAAAGATTGGGGACAGCAATAACTCTGGATCACCATTTTCGGAAGTGATAGCAAATGGACATATGATGAGCCATGCCTCAAGTCCAGTTGAAGATGATGCTGTGGGAACACGAATTAAAAGAAAGCGGAAACCATCAGAGAAGGTGTTGGAGTTGCAGGCAGAAAAAGTCGATAAAACCTCAAAATCTGGCAAATCATCAAGAACCAAAACTAAATCTTTGGTTGATGAGAGCAATGGTAATGGTTTTTATTATGATGACTTGTCTGATGAATGA
Protein sequence

>MsG0880043816.01.T01

MVFDYEDPLQGDFPEVIEEYLEHGIMKCIAFNRRAGCNDGSCVVWDFETRGIAKELRDNECSSPITSICWSKCGNRILVSAADKSLSLWDVMSGKRITRRVLPQTPLLARLHPGSSKPSLCLACPLSCAPMIVDLNTENTTYLQVSVSEKPSGPNPASRNKCSDGSTSFTPIAACFSKYGNLVYVGNSKGEILVIDSKDGEVRAMVPISGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPPKDEVRALAKLNENLGDLNGVEKLKAAGSKCLTLFREFQDAITKVHWKAPCFSGDEEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLSGIVYIWAKDYIENWSAFAPDFKEIEENEEYVEREDEFDLNPETGKVKGSDVNEDEDVDIVTVEKDPAFSDSDMSEEELCYLPASPCCDVPEQEDRFLESSSKIGDSNNSGSPFSEVIANGHMMSHASSPVEDDAVGTRIKRKRKPSEKVLELQAEKVDKTSKSGKSSRTKTKSLVDESNGNGFYYDDLSDE*