Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008349.01.T01 | XP_013463481.1 | 82.507 | 343 | 43 | 5 | 1 | 340 | 1 | 329 | 0 | 551 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008349.01.T01 | P51614 | 47.855 | 303 | 137 | 8 | 1 | 297 | 1 | 288 | 7.26E-88 | 269 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008349.01.T01 | A0A072V7A7 | 82.507 | 343 | 43 | 5 | 1 | 340 | 1 | 329 | 0.0 | 551 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048035.01 | MsG0280008349.01 | 0.822350 | 2.482540e-53 | 2.072795e-50 |
MsG0180000257.01 | MsG0280008349.01 | 0.830833 | 2.349857e-55 | 2.504794e-52 |
MsG0180001023.01 | MsG0280008349.01 | 0.826007 | 3.435197e-54 | 3.182444e-51 |
MsG0180001565.01 | MsG0280008349.01 | 0.800034 | 1.741576e-48 | 8.026418e-46 |
MsG0180002071.01 | MsG0280008349.01 | 0.800715 | 1.265338e-48 | 5.933146e-46 |
MsG0180002273.01 | MsG0280008349.01 | 0.803391 | 3.565809e-49 | 1.789683e-46 |
MsG0180002912.01 | MsG0280008349.01 | 0.803362 | 3.614525e-49 | 1.812730e-46 |
MsG0180003444.01 | MsG0280008349.01 | 0.824113 | 9.622931e-54 | 8.444767e-51 |
MsG0180004060.01 | MsG0280008349.01 | 0.818513 | 1.884412e-52 | 1.413506e-49 |
MsG0180004357.01 | MsG0280008349.01 | 0.813174 | 2.925220e-51 | 1.896476e-48 |
MsG0180004388.01 | MsG0280008349.01 | 0.818157 | 2.269408e-52 | 1.685591e-49 |
MsG0180004730.01 | MsG0280008349.01 | 0.813507 | 2.471966e-51 | 1.617356e-48 |
MsG0180005050.01 | MsG0280008349.01 | 0.810304 | 1.231799e-50 | 7.398687e-48 |
MsG0180005987.01 | MsG0280008349.01 | 0.842350 | 2.728716e-58 | 4.126207e-55 |
MsG0180006023.01 | MsG0280008349.01 | 0.836267 | 1.034218e-56 | 1.296843e-53 |
MsG0280006456.01 | MsG0280008349.01 | 0.805269 | 1.448547e-49 | 7.630086e-47 |
MsG0280007458.01 | MsG0280008349.01 | 0.832961 | 7.011825e-56 | 7.960574e-53 |
MsG0280007609.01 | MsG0280008349.01 | 0.836153 | 1.105402e-56 | 1.381230e-53 |
MsG0280007610.01 | MsG0280008349.01 | 0.806642 | 7.449944e-50 | 4.064543e-47 |
MsG0280008270.01 | MsG0280008349.01 | 0.808411 | 3.138987e-50 | 1.793521e-47 |
MsG0280008349.01 | MsG0280008352.01 | 0.889592 | 2.109576e-73 | 1.713080e-69 |
MsG0280008349.01 | MsG0280009514.01 | 0.842578 | 2.374164e-58 | 3.615543e-55 |
MsG0280008349.01 | MsG0280009748.01 | 0.800012 | 1.759222e-48 | 8.103275e-46 |
MsG0280008349.01 | MsG0280010389.01 | 0.853729 | 1.970509e-61 | 4.299259e-58 |
MsG0280008349.01 | MsG0280010551.01 | 0.840760 | 7.159454e-58 | 1.030072e-54 |
MsG0280008349.01 | MsG0280010553.01 | 0.818254 | 2.158076e-52 | 1.607117e-49 |
MsG0280008349.01 | MsG0280010614.01 | 0.823080 | 1.679324e-53 | 1.431500e-50 |
MsG0280008349.01 | MsG0280011070.01 | 0.821399 | 4.121948e-53 | 3.349808e-50 |
MsG0280008349.01 | MsG0380014118.01 | 0.809658 | 1.696928e-50 | 1.002211e-47 |
MsG0280008349.01 | MsG0380014573.01 | 0.831236 | 1.871968e-55 | 2.019120e-52 |
MsG0280008349.01 | MsG0380016553.01 | 0.801894 | 7.258029e-49 | 3.506585e-46 |
MsG0280008349.01 | MsG0380016624.01 | 0.808631 | 2.816201e-50 | 1.618298e-47 |
MsG0280008349.01 | MsG0380016765.01 | 0.803533 | 3.331525e-49 | 1.678341e-46 |
MsG0280008349.01 | MsG0380017177.01 | 0.834200 | 3.439450e-56 | 4.052213e-53 |
MsG0280008349.01 | MsG0380017233.01 | 0.817430 | 3.311152e-52 | 2.410927e-49 |
MsG0280008349.01 | MsG0380017266.01 | -0.831626 | 1.500352e-55 | 1.637305e-52 |
MsG0280008349.01 | MsG0380018009.01 | 0.809340 | 1.986369e-50 | 1.163223e-47 |
MsG0280008349.01 | MsG0480018970.01 | 0.807905 | 4.021875e-50 | 2.267414e-47 |
MsG0280008349.01 | MsG0480020090.01 | 0.826674 | 2.383050e-54 | 2.249937e-51 |
MsG0280008349.01 | MsG0480020242.01 | 0.810105 | 1.359639e-50 | 8.124798e-48 |
MsG0280008349.01 | MsG0480020445.01 | 0.802822 | 4.673752e-49 | 2.312135e-46 |
MsG0280008349.01 | MsG0480020559.01 | 0.831372 | 1.733015e-55 | 1.876942e-52 |
MsG0280008349.01 | MsG0480020634.01 | 0.807924 | 3.984743e-50 | 2.247663e-47 |
MsG0280008349.01 | MsG0480021350.01 | 0.813581 | 2.380748e-51 | 1.560788e-48 |
MsG0280008349.01 | MsG0480022479.01 | 0.822652 | 2.112097e-53 | 1.778734e-50 |
MsG0280008349.01 | MsG0480022480.01 | 0.841382 | 4.917280e-58 | 7.212753e-55 |
MsG0280008349.01 | MsG0480022597.01 | 0.824411 | 8.188827e-54 | 7.247241e-51 |
MsG0280008349.01 | MsG0480022598.01 | 0.804132 | 2.501069e-49 | 1.279470e-46 |
MsG0280008349.01 | MsG0480023707.01 | 0.825357 | 4.900273e-54 | 4.456089e-51 |
MsG0280008349.01 | MsG0480023718.01 | 0.828084 | 1.094012e-54 | 1.076295e-51 |
MsG0280008349.01 | MsG0580024035.01 | 0.842920 | 1.925871e-58 | 2.964005e-55 |
MsG0280008349.01 | MsG0580024073.01 | 0.814535 | 1.466564e-51 | 9.866527e-49 |
MsG0280008349.01 | MsG0580024477.01 | 0.827065 | 1.922058e-54 | 1.835414e-51 |
MsG0280008349.01 | MsG0580025555.01 | 0.800057 | 1.723019e-48 | 7.945607e-46 |
MsG0280008349.01 | MsG0580026023.01 | 0.812849 | 3.445975e-51 | 2.214728e-48 |
MsG0280008349.01 | MsG0580027129.01 | 0.817831 | 2.689013e-52 | 1.979548e-49 |
MsG0280008349.01 | MsG0580027208.01 | 0.823889 | 1.086235e-53 | 9.473182e-51 |
MsG0280008349.01 | MsG0580027833.01 | 0.802213 | 6.242320e-49 | 3.040233e-46 |
MsG0280008349.01 | MsG0580029189.01 | 0.826829 | 2.188271e-54 | 2.075264e-51 |
MsG0280008349.01 | MsG0580029960.01 | 0.828959 | 6.724828e-55 | 6.786095e-52 |
MsG0280008349.01 | MsG0680030316.01 | 0.806727 | 7.148191e-50 | 3.908646e-47 |
MsG0280008349.01 | MsG0680030656.01 | 0.841338 | 5.048345e-58 | 7.394217e-55 |
MsG0280008349.01 | MsG0680030672.01 | 0.819639 | 1.044867e-52 | 8.085674e-50 |
MsG0280008349.01 | MsG0680030685.01 | 0.815700 | 8.082156e-52 | 5.612526e-49 |
MsG0280008349.01 | MsG0680031114.01 | 0.815656 | 8.265649e-52 | 5.733209e-49 |
MsG0280008349.01 | MsG0680034450.01 | 0.815527 | 8.831165e-52 | 6.103640e-49 |
MsG0280008349.01 | MsG0680035656.01 | 0.818023 | 2.433807e-52 | 1.801034e-49 |
MsG0280008349.01 | MsG0780036177.01 | -0.801138 | 1.037153e-48 | 4.915939e-46 |
MsG0280008349.01 | MsG0780037975.01 | 0.800371 | 1.487056e-48 | 6.912674e-46 |
MsG0280008349.01 | MsG0780038386.01 | 0.818888 | 1.549113e-52 | 1.174149e-49 |
MsG0280008349.01 | MsG0780038495.01 | 0.821583 | 3.738767e-53 | 3.053887e-50 |
MsG0280008349.01 | MsG0780038602.01 | 0.803205 | 3.896126e-49 | 1.946168e-46 |
MsG0280008349.01 | MsG0780038829.01 | 0.819017 | 1.448039e-52 | 1.101497e-49 |
MsG0280008349.01 | MsG0780038937.01 | 0.816192 | 6.276266e-52 | 4.417550e-49 |
MsG0280008349.01 | MsG0780039252.01 | 0.815650 | 8.291378e-52 | 5.750163e-49 |
MsG0280008349.01 | MsG0780040442.01 | 0.800729 | 1.257359e-48 | 5.897836e-46 |
MsG0280008349.01 | MsG0780040488.01 | 0.821966 | 3.047564e-53 | 2.516575e-50 |
MsG0280008349.01 | MsG0780040947.01 | 0.815280 | 1.002515e-51 | 6.881996e-49 |
MsG0280008349.01 | MsG0780041220.01 | 0.804154 | 2.475824e-49 | 1.267267e-46 |
MsG0280008349.01 | MsG0780041376.01 | 0.824119 | 9.594490e-54 | 8.421178e-51 |
MsG0280008349.01 | MsG0780041787.01 | 0.800264 | 1.563571e-48 | 7.248519e-46 |
MsG0280008349.01 | MsG0880041883.01 | 0.810103 | 1.361249e-50 | 8.133938e-48 |
MsG0280008349.01 | MsG0880042698.01 | 0.811814 | 5.800116e-51 | 3.626116e-48 |
MsG0280008349.01 | MsG0880043262.01 | 0.807404 | 5.138747e-50 | 2.859761e-47 |
MsG0280008349.01 | MsG0880044237.01 | 0.827432 | 1.569719e-54 | 1.515205e-51 |
MsG0280008349.01 | MsG0880044509.01 | 0.808170 | 3.531963e-50 | 2.005439e-47 |
MsG0280008349.01 | MsG0880044510.01 | 0.813121 | 3.003948e-51 | 1.944711e-48 |
MsG0280008349.01 | MsG0880044542.01 | 0.802691 | 4.974789e-49 | 2.452675e-46 |
MsG0280008349.01 | MsG0880045583.01 | 0.822372 | 2.453509e-53 | 2.049908e-50 |
MsG0280008349.01 | MsG0880045782.01 | 0.800648 | 1.305990e-48 | 6.113592e-46 |
MsG0280008349.01 | MsG0880046467.01 | 0.803675 | 3.112849e-49 | 1.573778e-46 |
MsG0280008349.01 | MsG0880046615.01 | 0.807388 | 5.179447e-50 | 2.881173e-47 |
MsG0280008349.01 | MsG0880046669.01 | 0.851059 | 1.135663e-60 | 2.270242e-57 |
MsG0280008349.01 | MsG0880046762.01 | 0.835364 | 1.751411e-56 | 2.137169e-53 |
MsG0280008349.01 | MsG0880047191.01 | 0.821667 | 3.574259e-53 | 2.926642e-50 |
MsG0280008349.01 | MsG0880047425.01 | 0.801509 | 8.707352e-49 | 4.165797e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008349.01.T01 | MTR_2g040830 | 82.507 | 343 | 43 | 5 | 1 | 340 | 1 | 329 | 0.0 | 551 |
MsG0280008349.01.T01 | MTR_2g040690 | 79.710 | 345 | 51 | 6 | 1 | 340 | 1 | 331 | 0.0 | 530 |
MsG0280008349.01.T01 | MTR_2g040740 | 79.300 | 343 | 53 | 7 | 1 | 340 | 1 | 328 | 0.0 | 511 |
MsG0280008349.01.T01 | MTR_2g040650 | 79.765 | 341 | 52 | 6 | 1 | 340 | 1 | 325 | 7.32e-179 | 498 |
MsG0280008349.01.T01 | MTR_5g043550 | 50.968 | 310 | 125 | 8 | 10 | 311 | 4 | 294 | 7.21e-95 | 284 |
MsG0280008349.01.T01 | MTR_1g099310 | 49.684 | 316 | 134 | 8 | 1 | 311 | 1 | 296 | 1.34e-94 | 283 |
MsG0280008349.01.T01 | MTR_0027s0260 | 47.619 | 315 | 139 | 8 | 5 | 311 | 2 | 298 | 2.00e-92 | 278 |
MsG0280008349.01.T01 | MTR_8g055940 | 45.426 | 317 | 147 | 8 | 1 | 311 | 1 | 297 | 2.14e-88 | 268 |
MsG0280008349.01.T01 | MTR_1g099290 | 48.185 | 303 | 135 | 7 | 11 | 308 | 10 | 295 | 3.40e-86 | 271 |
MsG0280008349.01.T01 | MTR_2g040880 | 83.673 | 147 | 23 | 1 | 194 | 340 | 1 | 146 | 1.80e-85 | 254 |
MsG0280008349.01.T01 | MTR_1g099320 | 51.064 | 282 | 116 | 10 | 23 | 298 | 20 | 285 | 3.96e-84 | 256 |
MsG0280008349.01.T01 | MTR_7g116850 | 45.455 | 308 | 145 | 8 | 11 | 311 | 35 | 326 | 1.89e-78 | 243 |
MsG0280008349.01.T01 | MTR_8g467650 | 46.154 | 312 | 141 | 10 | 8 | 311 | 6 | 298 | 3.22e-78 | 241 |
MsG0280008349.01.T01 | MTR_7g116350 | 45.130 | 308 | 134 | 9 | 11 | 313 | 9 | 286 | 7.68e-77 | 251 |
MsG0280008349.01.T01 | MTR_1g099350 | 45.878 | 279 | 127 | 7 | 24 | 297 | 19 | 278 | 2.17e-76 | 236 |
MsG0280008349.01.T01 | MTR_2g102020 | 44.737 | 304 | 139 | 9 | 7 | 297 | 13 | 300 | 3.74e-75 | 235 |
MsG0280008349.01.T01 | MTR_6g023340 | 44.595 | 296 | 140 | 10 | 24 | 311 | 23 | 302 | 2.29e-73 | 229 |
MsG0280008349.01.T01 | MTR_2g040870 | 70.253 | 158 | 43 | 2 | 17 | 171 | 13 | 169 | 6.01e-72 | 221 |
MsG0280008349.01.T01 | MTR_2g040900 | 59.355 | 155 | 61 | 2 | 187 | 340 | 17 | 170 | 3.88e-57 | 183 |
MsG0280008349.01.T01 | MTR_2g040890 | 53.191 | 188 | 79 | 5 | 1 | 182 | 1 | 185 | 2.12e-56 | 182 |
MsG0280008349.01.T01 | MTR_2g040850 | 53.595 | 153 | 57 | 4 | 1 | 142 | 1 | 150 | 2.90e-42 | 147 |
MsG0280008349.01.T01 | MTR_2g040850 | 50.794 | 126 | 53 | 4 | 209 | 331 | 122 | 241 | 1.46e-26 | 105 |
MsG0280008349.01.T01 | MTR_4g077310 | 42.105 | 95 | 49 | 3 | 215 | 309 | 3 | 91 | 6.59e-16 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008349.01.T01 | AT5G24090 | 44.268 | 314 | 154 | 8 | 3 | 311 | 5 | 302 | 1.78e-85 | 260 |
Find 88 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGAAATTTGAATAAAAT+TGG | 0.164688 | 2:-29798222 | MsG0280008349.01.T01:three_prime_UTR |
TTGGCTTTCCTCAATGTCTT+TGG | 0.217357 | 2:-29801273 | MsG0280008349.01.T01:CDS |
ATAAAACACTGTCAAGAAAA+AGG | 0.225882 | 2:-29801171 | MsG0280008349.01.T01:CDS |
CCTATCAGAGACCTTATAAA+AGG | 0.236067 | 2:-29801517 | MsG0280008349.01.T01:five_prime_UTR |
CCCATGAAAACGGTATTATT+TGG | 0.251275 | 2:+29798724 | None:intergenic |
AACTTTCTTAGTGGTCAATT+TGG | 0.254606 | 2:-29801063 | MsG0280008349.01.T01:CDS |
ATAGTTGGAAGTTGGTTTAA+TGG | 0.284816 | 2:+29798624 | None:intergenic |
ACCAAATGATCTCATTTCTA+AGG | 0.290925 | 2:-29798656 | MsG0280008349.01.T01:CDS |
TTACTTTCCCTCAGAGCATT+AGG | 0.302991 | 2:-29801138 | MsG0280008349.01.T01:CDS |
AAGGAGGTACAAATCTTTAC+TGG | 0.304361 | 2:-29800996 | MsG0280008349.01.T01:CDS |
ATTAAACCAACTTCCAACTA+TGG | 0.306183 | 2:-29798622 | MsG0280008349.01.T01:CDS |
GTTAAAATCAACACCATCTA+AGG | 0.310593 | 2:+29801023 | None:intergenic |
ATGGTGGCATTGCCGTCTAC+TGG | 0.329897 | 2:-29801362 | MsG0280008349.01.T01:CDS |
CTTGGAAGTGTTACCTTAGA+TGG | 0.333989 | 2:-29801036 | MsG0280008349.01.T01:CDS |
CTCTATACTAACTTTCTTAG+TGG | 0.345832 | 2:-29801072 | MsG0280008349.01.T01:CDS |
ACTATATATATGTATGAGTA+TGG | 0.348380 | 2:-29798415 | MsG0280008349.01.T01:three_prime_UTR |
AGCACAAAATGGATACAAAA+AGG | 0.354708 | 2:-29801449 | MsG0280008349.01.T01:exon |
TAATTTCGAGATTGTACTCT+TGG | 0.374143 | 2:-29801292 | MsG0280008349.01.T01:CDS |
CTTGACAAAGCTATCAAAAC+TGG | 0.380969 | 2:-29798865 | MsG0280008349.01.T01:CDS |
ACCTTAGAAATGAGATCATT+TGG | 0.385560 | 2:+29798655 | None:intergenic |
CTATGGAGGAATTATGCTTT+GGG | 0.391332 | 2:-29798605 | MsG0280008349.01.T01:CDS |
GTAATCTGGCATATAACATT+GGG | 0.392231 | 2:+29798891 | None:intergenic |
GCGTATAATATGATTTAATT+CGG | 0.393756 | 2:+29798445 | None:intergenic |
ACTATGGAGGAATTATGCTT+TGG | 0.402308 | 2:-29798606 | MsG0280008349.01.T01:CDS |
TGGTGGCATTGCCGTCTACT+GGG | 0.405455 | 2:-29801361 | MsG0280008349.01.T01:CDS |
GCTTTCCTCAATGTCTTTGG+AGG | 0.413044 | 2:-29801270 | MsG0280008349.01.T01:CDS |
TGATTTGCAAAGTTCAAACT+TGG | 0.417925 | 2:+29801237 | None:intergenic |
TAGCTTCTTCTGGTGAGCTA+AGG | 0.426254 | 2:+29801112 | None:intergenic |
TGATTACAGCTATCAGATAA+AGG | 0.427044 | 2:-29798557 | MsG0280008349.01.T01:CDS |
CTACATTGCTCTTAAAATCA+TGG | 0.429928 | 2:-29798771 | MsG0280008349.01.T01:CDS |
TTCCTCAATGTCTTTGGAGG+AGG | 0.446588 | 2:-29801267 | MsG0280008349.01.T01:CDS |
AGCTTCTTCTGGTGAGCTAA+GGG | 0.448193 | 2:+29801113 | None:intergenic |
TGGGATAGATTTCATGATGT+TGG | 0.451538 | 2:-29798586 | MsG0280008349.01.T01:CDS |
CATCGTAAAGTTGGTCGTAC+AGG | 0.452145 | 2:+29798373 | None:intergenic |
CAAGTTTCTGAGGCAATAGC+TGG | 0.454724 | 2:-29798499 | MsG0280008349.01.T01:CDS |
ACAATCTAAGACAACAAAAC+AGG | 0.458920 | 2:-29800951 | MsG0280008349.01.T01:intron |
AAGCATAATTCCTCCATAGT+TGG | 0.460777 | 2:+29798609 | None:intergenic |
TCTTAAAATCATGGAATGCT+TGG | 0.464778 | 2:-29798762 | MsG0280008349.01.T01:CDS |
TTTCTTAACCATCGTAAAGT+TGG | 0.473433 | 2:+29798364 | None:intergenic |
CTATCAGAGACCTTATAAAA+GGG | 0.478413 | 2:-29801516 | MsG0280008349.01.T01:five_prime_UTR |
TCCCAAGGTTTACATGAAAA+CGG | 0.482053 | 2:+29798282 | None:intergenic |
ATTCCTCCATAGTTGGAAGT+TGG | 0.484513 | 2:+29798616 | None:intergenic |
TTTGTTGTCTTAGATTGTCA+AGG | 0.485852 | 2:+29800956 | None:intergenic |
GCTTTGTCAAGGTAGTAATC+TGG | 0.487955 | 2:+29798877 | None:intergenic |
TTTACTGGGATGACCTTGCT+AGG | 0.501225 | 2:-29800981 | MsG0280008349.01.T01:CDS |
GTCTTCTCTTATGTATGTAC+TGG | 0.503093 | 2:-29798251 | MsG0280008349.01.T01:three_prime_UTR |
TTGGAAGTTGGTTTAATGGA+AGG | 0.522478 | 2:+29798628 | None:intergenic |
AGTAATCTGGCATATAACAT+TGG | 0.524590 | 2:+29798890 | None:intergenic |
GGAGCTGCATCAGGTGATGC+TGG | 0.526731 | 2:+29798697 | None:intergenic |
CACTAAGAAAGTTAGTATAG+AGG | 0.529347 | 2:+29801073 | None:intergenic |
TGCTGGTAGTCCCATGAAAA+CGG | 0.529775 | 2:+29798714 | None:intergenic |
CCACCACTAGGAGCTGCATC+AGG | 0.548590 | 2:+29798688 | None:intergenic |
GGCAATAGCTGGATGTATCT+CGG | 0.551848 | 2:-29798488 | MsG0280008349.01.T01:CDS |
TATGATTTAATTCGGAAACA+TGG | 0.564143 | 2:+29798453 | None:intergenic |
GATTTGCAAAGTTCAAACTT+GGG | 0.564533 | 2:+29801238 | None:intergenic |
AGTGGTCAATTTGGTCCACT+TGG | 0.566066 | 2:-29801054 | MsG0280008349.01.T01:CDS |
AAGGGCTCCTAATGCTCTGA+GGG | 0.572834 | 2:+29801131 | None:intergenic |
TTGAACTTTGCAAATCATTG+TGG | 0.576615 | 2:-29801231 | MsG0280008349.01.T01:CDS |
AGAAGACGCTTTGATTCCCA+AGG | 0.579115 | 2:+29798267 | None:intergenic |
TTCCTCCTCCAAAGACATTG+AGG | 0.584718 | 2:+29801265 | None:intergenic |
TGATGATGCTTTGATAGTGA+AGG | 0.585896 | 2:+29801389 | None:intergenic |
TTACTGGGATGACCTTGCTA+GGG | 0.587273 | 2:-29800980 | MsG0280008349.01.T01:CDS |
AGGAGGTACAAATCTTTACT+GGG | 0.587554 | 2:-29800995 | MsG0280008349.01.T01:CDS |
GAGGGAATCAAAGTGTAACT+AGG | 0.588909 | 2:+29798304 | None:intergenic |
TGGGGCCAAAACGTAAAAGA+AGG | 0.591748 | 2:-29801342 | MsG0280008349.01.T01:CDS |
TCGGACACACGTCTAATTCG+AGG | 0.593765 | 2:-29801630 | MsG0280008349.01.T01:five_prime_UTR |
GATTGTCAAGGTCCCTAGCA+AGG | 0.595500 | 2:+29800968 | None:intergenic |
ATATTGTCAAGACTAACAAA+AGG | 0.600315 | 2:+29801415 | None:intergenic |
TAACTTAGCATCTATAAGCA+AGG | 0.603833 | 2:+29801602 | None:intergenic |
TTAGAAATGAGATCATTTGG+TGG | 0.607316 | 2:+29798658 | None:intergenic |
ATCAAAGCATCATCAAGTGA+TGG | 0.610130 | 2:-29801381 | MsG0280008349.01.T01:CDS |
TTGACATCAACATGTGACAC+TGG | 0.615620 | 2:-29801315 | MsG0280008349.01.T01:CDS |
AAGGTTTACATGAAAACGGA+GGG | 0.629978 | 2:+29798286 | None:intergenic |
GATGATGCTTTGATAGTGAA+GGG | 0.636457 | 2:+29801390 | None:intergenic |
AAACCAACTTCCAACTATGG+AGG | 0.642148 | 2:-29798619 | MsG0280008349.01.T01:CDS |
CTGTACGACCAACTTTACGA+TGG | 0.643200 | 2:-29798372 | MsG0280008349.01.T01:three_prime_UTR |
AAAGCATCATCAAGTGATGG+TGG | 0.646449 | 2:-29801378 | MsG0280008349.01.T01:CDS |
TCACCTGATGCAGCTCCTAG+TGG | 0.649095 | 2:-29798691 | MsG0280008349.01.T01:CDS |
TAAGGGCTCCTAATGCTCTG+AGG | 0.652053 | 2:+29801130 | None:intergenic |
CCTGATGCAGCTCCTAGTGG+TGG | 0.652514 | 2:-29798688 | MsG0280008349.01.T01:CDS |
GGTGGCATTGCCGTCTACTG+GGG | 0.654303 | 2:-29801360 | MsG0280008349.01.T01:CDS |
AGTGTCACATGTTGATGTCA+AGG | 0.656681 | 2:+29801317 | None:intergenic |
CAAGGTTTACATGAAAACGG+AGG | 0.671734 | 2:+29798285 | None:intergenic |
GACACACGTCTAATTCGAGG+AGG | 0.688209 | 2:-29801627 | MsG0280008349.01.T01:five_prime_UTR |
GGTGGTATATAACCACCACT+AGG | 0.690618 | 2:+29798676 | None:intergenic |
TAATCTGGCATATAACATTG+GGG | 0.697221 | 2:+29798892 | None:intergenic |
ACACACGTCTAATTCGAGGA+GGG | 0.714268 | 2:-29801626 | MsG0280008349.01.T01:five_prime_UTR |
TCTAAGGTAACACTTCCAAG+TGG | 0.714737 | 2:+29801039 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATGAGAAAATATAATAT+AGG | - | Chr2:29799442-29799461 | MsG0280008349.01.T01:intron | 10.0% |
!! | TAATAAATATTTACCATTTA+TGG | - | Chr2:29800556-29800575 | MsG0280008349.01.T01:intron | 10.0% |
!!! | TATTTTTCTTTGAAAAAATA+TGG | + | Chr2:29799335-29799354 | None:intergenic | 10.0% |
!! | ATACTTATGTTACAAATATT+TGG | + | Chr2:29800010-29800029 | None:intergenic | 15.0% |
!! | TACTTATGTTACAAATATTT+GGG | + | Chr2:29800009-29800028 | None:intergenic | 15.0% |
!!! | ATGAAATGATGTTTTTTTTA+TGG | + | Chr2:29800762-29800781 | None:intergenic | 15.0% |
!!! | CTTTGAAATTTGAATAAAAT+TGG | - | Chr2:29801614-29801633 | MsG0280008349.01.T01:five_prime_UTR | 15.0% |
!!! | TATCCATTCTAAAATTATTA+TGG | + | Chr2:29799765-29799784 | None:intergenic | 15.0% |
!!! | TATTGAGTAACTTTTTTTTT+AGG | + | Chr2:29798272-29798291 | None:intergenic | 15.0% |
!!! | TGAAATGATGTTTTTTTTAT+GGG | + | Chr2:29800761-29800780 | None:intergenic | 15.0% |
!!! | TTAATTTATTGATTTATGAC+AGG | + | Chr2:29800679-29800698 | None:intergenic | 15.0% |
!!! | TTTTCAAAGAAAAATATGTA+TGG | - | Chr2:29799339-29799358 | MsG0280008349.01.T01:intron | 15.0% |
!!! | TTTTTTTTATCATATTGACA+TGG | + | Chr2:29801037-29801056 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAATCTCTTGC+AGG | - | Chr2:29800900-29800919 | MsG0280008349.01.T01:intron | 20.0% |
!! | AAAAAATATGGTTGTTCATT+AGG | + | Chr2:29799323-29799342 | None:intergenic | 20.0% |
!! | AAATATAATGTGAGTATAAG+AGG | - | Chr2:29799390-29799409 | MsG0280008349.01.T01:intron | 20.0% |
!! | ACTATATATATGTATGAGTA+TGG | - | Chr2:29801421-29801440 | MsG0280008349.01.T01:CDS | 20.0% |
!! | AGCATAATGCTATAATATAT+TGG | - | Chr2:29800611-29800630 | MsG0280008349.01.T01:intron | 20.0% |
!! | AGTATTATATGAACTAGTAT+TGG | - | Chr2:29799835-29799854 | MsG0280008349.01.T01:intron | 20.0% |
!! | ATATTCACATTATACACTTT+AGG | + | Chr2:29799427-29799446 | None:intergenic | 20.0% |
!! | ATCTTTAAATTAAAGTGTAC+CGG | - | Chr2:29800649-29800668 | MsG0280008349.01.T01:intron | 20.0% |
!! | GCATAATGCTATAATATATT+GGG | - | Chr2:29800612-29800631 | MsG0280008349.01.T01:intron | 20.0% |
!! | GCGTATAATATGATTTAATT+CGG | + | Chr2:29801394-29801413 | None:intergenic | 20.0% |
!! | TAAAGAAATATATCATGACA+TGG | + | Chr2:29799179-29799198 | None:intergenic | 20.0% |
!! | TAGAATGGATATAGTAAAAA+AGG | - | Chr2:29799774-29799793 | MsG0280008349.01.T01:intron | 20.0% |
!!! | AAAAGGTTGATTTGTTAATT+AGG | + | Chr2:29800858-29800877 | None:intergenic | 20.0% |
!!! | AAAGGTTGATTTGTTAATTA+GGG | + | Chr2:29800857-29800876 | None:intergenic | 20.0% |
!!! | ACGGAAAATACTTTTTTTTT+AGG | + | Chr2:29800045-29800064 | None:intergenic | 20.0% |
!!! | ACTTTTTTTTTAGGGAAATA+CGG | + | Chr2:29800036-29800055 | None:intergenic | 20.0% |
!!! | AGATTTTTTTTTTTTGAGAG+AGG | + | Chr2:29800895-29800914 | None:intergenic | 20.0% |
!!! | CGGAAAATACTTTTTTTTTA+GGG | + | Chr2:29800044-29800063 | None:intergenic | 20.0% |
!!! | TGCTTACTTTTATTTATGTT+TGG | + | Chr2:29799604-29799623 | None:intergenic | 20.0% |
!!! | TTTAACTTAAGAAAGTAGAA+TGG | - | Chr2:29800201-29800220 | MsG0280008349.01.T01:intron | 20.0% |
!!! | TTTTTTATAAAATTGGGATG+TGG | + | Chr2:29799060-29799079 | None:intergenic | 20.0% |
! | ATAAAACACTGTCAAGAAAA+AGG | - | Chr2:29798665-29798684 | MsG0280008349.01.T01:CDS | 25.0% |
! | ATATTGTCAAGACTAACAAA+AGG | + | Chr2:29798424-29798443 | None:intergenic | 25.0% |
! | GTTAAGAAAGAAAAATGATC+AGG | - | Chr2:29801486-29801505 | MsG0280008349.01.T01:five_prime_UTR | 25.0% |
! | TAAAACACTGTCAAGAAAAA+GGG | - | Chr2:29798666-29798685 | MsG0280008349.01.T01:CDS | 25.0% |
! | TAATATATTGGGAGTTTCTA+CGG | - | Chr2:29800623-29800642 | MsG0280008349.01.T01:intron | 25.0% |
! | TATGATTTAATTCGGAAACA+TGG | + | Chr2:29801386-29801405 | None:intergenic | 25.0% |
! | TGCAAATAAACGGATATAAT+TGG | - | Chr2:29800375-29800394 | MsG0280008349.01.T01:intron | 25.0% |
! | TTAGGATGTTAAATAAAACG+TGG | + | Chr2:29799305-29799324 | None:intergenic | 25.0% |
!! | CAAAATTTTTCACTTGTCTT+CGG | + | Chr2:29800244-29800263 | None:intergenic | 25.0% |
!! | GTTGAAATTTTACAATCTCA+GGG | - | Chr2:29800397-29800416 | MsG0280008349.01.T01:intron | 25.0% |
!! | TAAACACAAAAAGCACAAAA+TGG | - | Chr2:29798376-29798395 | MsG0280008349.01.T01:three_prime_UTR | 25.0% |
!! | TATGCTAACTTGAGTTTTTA+AGG | + | Chr2:29800597-29800616 | None:intergenic | 25.0% |
!! | TTATATGAACTAGTATTGGA+TGG | - | Chr2:29799839-29799858 | MsG0280008349.01.T01:intron | 25.0% |
!! | TTGAAATTTTACAATCTCAG+GGG | - | Chr2:29800398-29800417 | MsG0280008349.01.T01:intron | 25.0% |
!! | TTTTATCATATTGACATGGA+GGG | + | Chr2:29801033-29801052 | None:intergenic | 25.0% |
!! | TTTTTATCATATTGACATGG+AGG | + | Chr2:29801034-29801053 | None:intergenic | 25.0% |
!!! | GCTCCATAATAATTTTAGAA+TGG | - | Chr2:29799759-29799778 | MsG0280008349.01.T01:intron | 25.0% |
!!! | TTCTTGACAGTGTTTTATTT+CGG | + | Chr2:29798663-29798682 | None:intergenic | 25.0% |
AACTTTCTTAGTGGTCAATT+TGG | - | Chr2:29798773-29798792 | MsG0280008349.01.T01:CDS | 30.0% | |
ACCAAATGATCTCATTTCTA+AGG | - | Chr2:29801180-29801199 | MsG0280008349.01.T01:CDS | 30.0% | |
ACCTTAGAAATGAGATCATT+TGG | + | Chr2:29801184-29801203 | None:intergenic | 30.0% | |
AGCACAAAATGGATACAAAA+AGG | - | Chr2:29798387-29798406 | MsG0280008349.01.T01:three_prime_UTR | 30.0% | |
AGTAATCTGGCATATAACAT+TGG | + | Chr2:29800949-29800968 | None:intergenic | 30.0% | |
ATTAAACCAACTTCCAACTA+TGG | - | Chr2:29801214-29801233 | MsG0280008349.01.T01:CDS | 30.0% | |
ATTGGATGGACACAATATAA+GGG | - | Chr2:29799853-29799872 | MsG0280008349.01.T01:intron | 30.0% | |
CACTAAGAAAGTTAGTATAG+AGG | + | Chr2:29798766-29798785 | None:intergenic | 30.0% | |
CACTTCAAATTAAGTTCTCA+GGG | + | Chr2:29800142-29800161 | None:intergenic | 30.0% | |
CATGTTAAGGATTCCATAAA+TGG | + | Chr2:29800572-29800591 | None:intergenic | 30.0% | |
CCCAGTTTGCATATTTAATA+CGG | + | Chr2:29800064-29800083 | None:intergenic | 30.0% | |
CCGTATTAAATATGCAAACT+GGG | - | Chr2:29800061-29800080 | MsG0280008349.01.T01:intron | 30.0% | |
CTACATTGCTCTTAAAATCA+TGG | - | Chr2:29801065-29801084 | MsG0280008349.01.T01:CDS | 30.0% | |
CTATCAGAGACCTTATAAAA+GGG | - | Chr2:29798320-29798339 | MsG0280008349.01.T01:three_prime_UTR | 30.0% | |
CTCTATACTAACTTTCTTAG+TGG | - | Chr2:29798764-29798783 | MsG0280008349.01.T01:CDS | 30.0% | |
GATTTGCAAAGTTCAAACTT+GGG | + | Chr2:29798601-29798620 | None:intergenic | 30.0% | |
GGTGCAAAATAAATTTCTCA+GGG | - | Chr2:29800344-29800363 | MsG0280008349.01.T01:intron | 30.0% | |
GTAATCTGGCATATAACATT+GGG | + | Chr2:29800948-29800967 | None:intergenic | 30.0% | |
GTTAAAATCAACACCATCTA+AGG | + | Chr2:29798816-29798835 | None:intergenic | 30.0% | |
TAACTTAGCATCTATAAGCA+AGG | + | Chr2:29798237-29798256 | None:intergenic | 30.0% | |
TAATCTGGCATATAACATTG+GGG | + | Chr2:29800947-29800966 | None:intergenic | 30.0% | |
TAATTTCGAGATTGTACTCT+TGG | - | Chr2:29798544-29798563 | MsG0280008349.01.T01:CDS | 30.0% | |
TATTGGATGGACACAATATA+AGG | - | Chr2:29799852-29799871 | MsG0280008349.01.T01:intron | 30.0% | |
TCACTTCAAATTAAGTTCTC+AGG | + | Chr2:29800143-29800162 | None:intergenic | 30.0% | |
TCCGTATTAAATATGCAAAC+TGG | - | Chr2:29800060-29800079 | MsG0280008349.01.T01:intron | 30.0% | |
TCTTAAAATCATGGAATGCT+TGG | - | Chr2:29801074-29801093 | MsG0280008349.01.T01:CDS | 30.0% | |
TGATTACAGCTATCAGATAA+AGG | - | Chr2:29801279-29801298 | MsG0280008349.01.T01:CDS | 30.0% | |
TGGTGCAAAATAAATTTCTC+AGG | - | Chr2:29800343-29800362 | MsG0280008349.01.T01:intron | 30.0% | |
TTAGAAATGAGATCATTTGG+TGG | + | Chr2:29801181-29801200 | None:intergenic | 30.0% | |
TTGAACTTTGCAAATCATTG+TGG | - | Chr2:29798605-29798624 | MsG0280008349.01.T01:CDS | 30.0% | |
TTTCTTAACCATCGTAAAGT+TGG | + | Chr2:29801475-29801494 | None:intergenic | 30.0% | |
! | ACAATCTAAGACAACAAAAC+AGG | - | Chr2:29798885-29798904 | MsG0280008349.01.T01:CDS | 30.0% |
! | ACCAAATAATACCGTTTTCA+TGG | - | Chr2:29801111-29801130 | MsG0280008349.01.T01:CDS | 30.0% |
! | ATAGTTGGAAGTTGGTTTAA+TGG | + | Chr2:29801215-29801234 | None:intergenic | 30.0% |
! | ATTGAGCAAACCCTTTTATA+AGG | + | Chr2:29798333-29798352 | None:intergenic | 30.0% |
! | CCAAATAATACCGTTTTCAT+GGG | - | Chr2:29801112-29801131 | MsG0280008349.01.T01:CDS | 30.0% |
! | GGTTGAAATTTTACAATCTC+AGG | - | Chr2:29800396-29800415 | MsG0280008349.01.T01:intron | 30.0% |
! | TGAAATTTTACAATCTCAGG+GGG | - | Chr2:29800399-29800418 | MsG0280008349.01.T01:intron | 30.0% |
! | TGATTTGCAAAGTTCAAACT+TGG | + | Chr2:29798602-29798621 | None:intergenic | 30.0% |
! | TTTGTTGTCTTAGATTGTCA+AGG | + | Chr2:29798883-29798902 | None:intergenic | 30.0% |
!! | GTTGATTTTAACATTGAAGG+AGG | - | Chr2:29798824-29798843 | MsG0280008349.01.T01:CDS | 30.0% |
!! | TATAGTTTCAAGTTGTACAG+CGG | + | Chr2:29798969-29798988 | None:intergenic | 30.0% |
!!! | AGTTTTTAAGGCACATGTTA+AGG | + | Chr2:29800585-29800604 | None:intergenic | 30.0% |
!!! | GGTGTTGATTTTAACATTGA+AGG | - | Chr2:29798821-29798840 | MsG0280008349.01.T01:CDS | 30.0% |
!!! | TTTTAAGACACAAGTTTCTG+AGG | - | Chr2:29801327-29801346 | MsG0280008349.01.T01:CDS | 30.0% |
AAATATGCAAACTGGGAACT+TGG | - | Chr2:29800068-29800087 | MsG0280008349.01.T01:intron | 35.0% | |
AAGCATAATTCCTCCATAGT+TGG | + | Chr2:29801230-29801249 | None:intergenic | 35.0% | |
AAGGTTTACATGAAAACGGA+GGG | + | Chr2:29801553-29801572 | None:intergenic | 35.0% | |
ACATGTTAAGGAACTTAAGG+TGG | - | Chr2:29800473-29800492 | MsG0280008349.01.T01:intron | 35.0% | |
ACTATGGAGGAATTATGCTT+TGG | - | Chr2:29801230-29801249 | MsG0280008349.01.T01:CDS | 35.0% | |
ATGACATGGAGATATCAGAA+AGG | + | Chr2:29799165-29799184 | None:intergenic | 35.0% | |
ATGATCAAGACTTTAGCACA+TGG | + | Chr2:29800094-29800113 | None:intergenic | 35.0% | |
CCCATGAAAACGGTATTATT+TGG | + | Chr2:29801115-29801134 | None:intergenic | 35.0% | |
CCTATCAGAGACCTTATAAA+AGG | - | Chr2:29798319-29798338 | MsG0280008349.01.T01:three_prime_UTR | 35.0% | |
CTATGGAGGAATTATGCTTT+GGG | - | Chr2:29801231-29801250 | MsG0280008349.01.T01:CDS | 35.0% | |
CTTATTCTTTACGCACACAA+AGG | + | Chr2:29799227-29799246 | None:intergenic | 35.0% | |
CTTGACAAAGCTATCAAAAC+TGG | - | Chr2:29800971-29800990 | MsG0280008349.01.T01:CDS | 35.0% | |
CTTTGTGTGCGTAAAGAATA+AGG | - | Chr2:29799225-29799244 | MsG0280008349.01.T01:intron | 35.0% | |
GAAGGTGAGATAAGAATAAC+TGG | - | Chr2:29800287-29800306 | MsG0280008349.01.T01:intron | 35.0% | |
GTCTTCTCTTATGTATGTAC+TGG | - | Chr2:29801585-29801604 | MsG0280008349.01.T01:five_prime_UTR | 35.0% | |
GTTAAATAAAACGTGGTGTC+TGG | + | Chr2:29799298-29799317 | None:intergenic | 35.0% | |
TCCCAAGGTTTACATGAAAA+CGG | + | Chr2:29801557-29801576 | None:intergenic | 35.0% | |
TGGGATAGATTTCATGATGT+TGG | - | Chr2:29801250-29801269 | MsG0280008349.01.T01:CDS | 35.0% | |
TTGATTTATGACAGGTGTAC+CGG | + | Chr2:29800671-29800690 | None:intergenic | 35.0% | |
! | AAGATGAAGAACCCTGTTTT+GGG | + | Chr2:29799110-29799129 | None:intergenic | 35.0% |
! | AAGGAGGTACAAATCTTTAC+TGG | - | Chr2:29798840-29798859 | MsG0280008349.01.T01:CDS | 35.0% |
! | AGGAGGTACAAATCTTTACT+GGG | - | Chr2:29798841-29798860 | MsG0280008349.01.T01:CDS | 35.0% |
! | ATCAAAGCATCATCAAGTGA+TGG | - | Chr2:29798455-29798474 | MsG0280008349.01.T01:exon | 35.0% |
! | ATCAACCTTTTATCTCTTGC+AGG | - | Chr2:29800867-29800886 | MsG0280008349.01.T01:intron | 35.0% |
! | CCTTTTATAAGGTCTCTGAT+AGG | + | Chr2:29798322-29798341 | None:intergenic | 35.0% |
! | TCCGTTTTCATGTAAACCTT+GGG | - | Chr2:29801553-29801572 | MsG0280008349.01.T01:five_prime_UTR | 35.0% |
! | TTGGAAGTTGGTTTAATGGA+AGG | + | Chr2:29801211-29801230 | None:intergenic | 35.0% |
!! | GATGATGCTTTGATAGTGAA+GGG | + | Chr2:29798449-29798468 | None:intergenic | 35.0% |
!! | TGATGATGCTTTGATAGTGA+AGG | + | Chr2:29798450-29798469 | None:intergenic | 35.0% |
!!! | CAGTTTTGATAGCTTTGTCA+AGG | + | Chr2:29800973-29800992 | None:intergenic | 35.0% |
!!! | GAAACAGTTTTAGCTTCTTC+TGG | + | Chr2:29798737-29798756 | None:intergenic | 35.0% |
AAACCAACTTCCAACTATGG+AGG | - | Chr2:29801217-29801236 | MsG0280008349.01.T01:CDS | 40.0% | |
AGGTACCTGCAAGAGATAAA+AGG | + | Chr2:29800875-29800894 | None:intergenic | 40.0% | |
AGTGTCACATGTTGATGTCA+AGG | + | Chr2:29798522-29798541 | None:intergenic | 40.0% | |
ATTCCTCCATAGTTGGAAGT+TGG | + | Chr2:29801223-29801242 | None:intergenic | 40.0% | |
CAAGGTTTACATGAAAACGG+AGG | + | Chr2:29801554-29801573 | None:intergenic | 40.0% | |
CTCAAAGTGAAACAACATGC+TGG | - | Chr2:29800323-29800342 | MsG0280008349.01.T01:intron | 40.0% | |
CTGTCAAGAAAAAGGGTTCA+AGG | - | Chr2:29798673-29798692 | MsG0280008349.01.T01:CDS | 40.0% | |
GAGGGAATCAAAGTGTAACT+AGG | + | Chr2:29801535-29801554 | None:intergenic | 40.0% | |
GCGTAAAGAATAAGGTTGCT+TGG | - | Chr2:29799233-29799252 | MsG0280008349.01.T01:intron | 40.0% | |
GCTTTGTCAAGGTAGTAATC+TGG | + | Chr2:29800962-29800981 | None:intergenic | 40.0% | |
GGCACATGTTAAGGAACTTA+AGG | - | Chr2:29800470-29800489 | MsG0280008349.01.T01:intron | 40.0% | |
GGTGTGCAAGTGCAAATAAA+CGG | - | Chr2:29800365-29800384 | MsG0280008349.01.T01:intron | 40.0% | |
TTGACATCAACATGTGACAC+TGG | - | Chr2:29798521-29798540 | MsG0280008349.01.T01:CDS | 40.0% | |
! | AAAGCATCATCAAGTGATGG+TGG | - | Chr2:29798458-29798477 | MsG0280008349.01.T01:exon | 40.0% |
! | AGGTGCCTTCTTTTACGTTT+TGG | + | Chr2:29798502-29798521 | None:intergenic | 40.0% |
! | CAGGTACTTTTACTTGTCTG+CGG | - | Chr2:29800919-29800938 | MsG0280008349.01.T01:intron | 40.0% |
! | CTCCGTTTTCATGTAAACCT+TGG | - | Chr2:29801552-29801571 | MsG0280008349.01.T01:five_prime_UTR | 40.0% |
! | GAAGATGAAGAACCCTGTTT+TGG | + | Chr2:29799111-29799130 | None:intergenic | 40.0% |
! | TCTAAGGTAACACTTCCAAG+TGG | + | Chr2:29798800-29798819 | None:intergenic | 40.0% |
! | TTACTTTCCCTCAGAGCATT+AGG | - | Chr2:29798698-29798717 | MsG0280008349.01.T01:CDS | 40.0% |
! | TTGGCTTTCCTCAATGTCTT+TGG | - | Chr2:29798563-29798582 | MsG0280008349.01.T01:CDS | 40.0% |
!! | CGGATTCGAGTTTTGTACAA+GGG | + | Chr2:29798643-29798662 | None:intergenic | 40.0% |
!! | CTTGGAAGTGTTACCTTAGA+TGG | - | Chr2:29798800-29798819 | MsG0280008349.01.T01:CDS | 40.0% |
!! | TCGGATTCGAGTTTTGTACA+AGG | + | Chr2:29798644-29798663 | None:intergenic | 40.0% |
!! | TTAACTTGTGCTCTTAGCAG+TGG | - | Chr2:29799471-29799490 | MsG0280008349.01.T01:intron | 40.0% |
AAAGAAACTGGCATCTGGCT+TGG | - | Chr2:29799262-29799281 | MsG0280008349.01.T01:intron | 45.0% | |
AAGCCAGATGCCAGTTTCTT+TGG | + | Chr2:29799263-29799282 | None:intergenic | 45.0% | |
ACACACGTCTAATTCGAGGA+GGG | - | Chr2:29798210-29798229 | MsG0280008349.01.T01:three_prime_UTR | 45.0% | |
AGAAGACGCTTTGATTCCCA+AGG | + | Chr2:29801572-29801591 | None:intergenic | 45.0% | |
AGACCAAAGAAACTGGCATC+TGG | - | Chr2:29799257-29799276 | MsG0280008349.01.T01:intron | 45.0% | |
AGCTTCTTCTGGTGAGCTAA+GGG | + | Chr2:29798726-29798745 | None:intergenic | 45.0% | |
AGTGGTCAATTTGGTCCACT+TGG | - | Chr2:29798782-29798801 | MsG0280008349.01.T01:CDS | 45.0% | |
CTGTACGACCAACTTTACGA+TGG | - | Chr2:29801464-29801483 | MsG0280008349.01.T01:five_prime_UTR | 45.0% | |
CTTGACCACATCCCAAAACA+GGG | - | Chr2:29799096-29799115 | MsG0280008349.01.T01:intron | 45.0% | |
GCTTGGTAGACCAAAGAAAC+TGG | - | Chr2:29799250-29799269 | MsG0280008349.01.T01:intron | 45.0% | |
GCTTTCCTCAATGTCTTTGG+AGG | - | Chr2:29798566-29798585 | MsG0280008349.01.T01:CDS | 45.0% | |
GGCAATAGCTGGATGTATCT+CGG | - | Chr2:29801348-29801367 | MsG0280008349.01.T01:CDS | 45.0% | |
GGTGGTATATAACCACCACT+AGG | + | Chr2:29801163-29801182 | None:intergenic | 45.0% | |
TAGCTTCTTCTGGTGAGCTA+AGG | + | Chr2:29798727-29798746 | None:intergenic | 45.0% | |
TCACCTTCTGACGCATAAAG+AGG | + | Chr2:29800275-29800294 | None:intergenic | 45.0% | |
TCTTGACCACATCCCAAAAC+AGG | - | Chr2:29799095-29799114 | MsG0280008349.01.T01:intron | 45.0% | |
TGCTGGTAGTCCCATGAAAA+CGG | + | Chr2:29801125-29801144 | None:intergenic | 45.0% | |
TGGGGCCAAAACGTAAAAGA+AGG | - | Chr2:29798494-29798513 | MsG0280008349.01.T01:CDS | 45.0% | |
TTACTGGGATGACCTTGCTA+GGG | - | Chr2:29798856-29798875 | MsG0280008349.01.T01:CDS | 45.0% | |
TTCCTCCTCCAAAGACATTG+AGG | + | Chr2:29798574-29798593 | None:intergenic | 45.0% | |
TTTACTGGGATGACCTTGCT+AGG | - | Chr2:29798855-29798874 | MsG0280008349.01.T01:CDS | 45.0% | |
! | AAAACGTGGTGTCTGGTCTT+TGG | + | Chr2:29799291-29799310 | None:intergenic | 45.0% |
! | AAGAAACTGGCATCTGGCTT+GGG | - | Chr2:29799263-29799282 | MsG0280008349.01.T01:intron | 45.0% |
! | CATCGTAAAGTTGGTCGTAC+AGG | + | Chr2:29801466-29801485 | None:intergenic | 45.0% |
! | TTCCTCAATGTCTTTGGAGG+AGG | - | Chr2:29798569-29798588 | MsG0280008349.01.T01:CDS | 45.0% |
!! | CAAGTTTCTGAGGCAATAGC+TGG | - | Chr2:29801337-29801356 | MsG0280008349.01.T01:CDS | 45.0% |
!! | GAGTTTTGTACAAGGGCTCT+CGG | + | Chr2:29798636-29798655 | None:intergenic | 45.0% |
!!! | AAGAACCCTGTTTTGGGATG+TGG | + | Chr2:29799104-29799123 | None:intergenic | 45.0% |
!!! | AAATATCTTTTTTATAAAAT+TGG | + | Chr2:29799067-29799086 | None:intergenic | 5.0% |
!!! | AATATCTTTTTTATAAAATT+GGG | + | Chr2:29799066-29799085 | None:intergenic | 5.0% |
AACATGTGCCCTAAGAGCCA+GGG | + | Chr2:29800460-29800479 | None:intergenic | 50.0% | |
AAGGGCTCCTAATGCTCTGA+GGG | + | Chr2:29798708-29798727 | None:intergenic | 50.0% | |
AGGCACGTGCAACACAGATT+TGG | + | Chr2:29799207-29799226 | None:intergenic | 50.0% | |
GACACACGTCTAATTCGAGG+AGG | - | Chr2:29798209-29798228 | MsG0280008349.01.T01:three_prime_UTR | 50.0% | |
GATTGTCAAGGTCCCTAGCA+AGG | + | Chr2:29798871-29798890 | None:intergenic | 50.0% | |
GCACCTCTTTATGCGTCAGA+AGG | - | Chr2:29800269-29800288 | MsG0280008349.01.T01:intron | 50.0% | |
GGCACGTGCAACACAGATTT+GGG | + | Chr2:29799206-29799225 | None:intergenic | 50.0% | |
GGCTCTTAGGGCACATGTTA+AGG | - | Chr2:29800461-29800480 | MsG0280008349.01.T01:intron | 50.0% | |
TAACATGTGCCCTAAGAGCC+AGG | + | Chr2:29800461-29800480 | None:intergenic | 50.0% | |
TAAGGGCTCCTAATGCTCTG+AGG | + | Chr2:29798709-29798728 | None:intergenic | 50.0% | |
! | TTTACAATCTCAGGGGGTGC+AGG | - | Chr2:29800405-29800424 | MsG0280008349.01.T01:intron | 50.0% |
!! | TACGTTTTGGCCCCAGTAGA+CGG | + | Chr2:29798489-29798508 | None:intergenic | 50.0% |
ACATGTGCCCTAAGAGCCAG+GGG | + | Chr2:29800459-29800478 | None:intergenic | 55.0% | |
AGGTGCACACCCTCACTAAG+AGG | - | Chr2:29800425-29800444 | MsG0280008349.01.T01:intron | 55.0% | |
AGTGGCGTATCCAGAACCCT+GGG | - | Chr2:29799489-29799508 | MsG0280008349.01.T01:intron | 55.0% | |
ATGGTGGCATTGCCGTCTAC+TGG | - | Chr2:29798474-29798493 | MsG0280008349.01.T01:CDS | 55.0% | |
GTATCCAGAACCCTGGGTCA+GGG | - | Chr2:29799495-29799514 | MsG0280008349.01.T01:intron | 55.0% | |
TATCCAGAACCCTGGGTCAG+GGG | - | Chr2:29799496-29799515 | MsG0280008349.01.T01:intron | 55.0% | |
TCACCTGATGCAGCTCCTAG+TGG | - | Chr2:29801145-29801164 | MsG0280008349.01.T01:CDS | 55.0% | |
TGCACACCCTCACTAAGAGG+TGG | - | Chr2:29800428-29800447 | MsG0280008349.01.T01:intron | 55.0% | |
TGGTGGCATTGCCGTCTACT+GGG | - | Chr2:29798475-29798494 | MsG0280008349.01.T01:CDS | 55.0% | |
ATCCAGAACCCTGGGTCAGG+GGG | - | Chr2:29799497-29799516 | MsG0280008349.01.T01:intron | 60.0% | |
CAGTGGCGTATCCAGAACCC+TGG | - | Chr2:29799488-29799507 | MsG0280008349.01.T01:intron | 60.0% | |
CCACCACTAGGAGCTGCATC+AGG | + | Chr2:29801151-29801170 | None:intergenic | 60.0% | |
CCTGATGCAGCTCCTAGTGG+TGG | - | Chr2:29801148-29801167 | MsG0280008349.01.T01:CDS | 60.0% | |
CGTATCCAGAACCCTGGGTC+AGG | - | Chr2:29799494-29799513 | MsG0280008349.01.T01:intron | 60.0% | |
GCGGAGCCACCTCTTAGTGA+GGG | + | Chr2:29800437-29800456 | None:intergenic | 60.0% | |
GGAGCTGCATCAGGTGATGC+TGG | + | Chr2:29801142-29801161 | None:intergenic | 60.0% | |
GGTGGCATTGCCGTCTACTG+GGG | - | Chr2:29798476-29798495 | MsG0280008349.01.T01:CDS | 60.0% | |
!! | GTCAGGGGGTGCGGAGTTTT+TGG | - | Chr2:29799511-29799530 | MsG0280008349.01.T01:intron | 60.0% |
GGCGGAGCCACCTCTTAGTG+AGG | + | Chr2:29800438-29800457 | None:intergenic | 65.0% | |
TGTGCCCTAAGAGCCAGGGG+CGG | + | Chr2:29800456-29800475 | None:intergenic | 65.0% | |
AACTCCGCACCCCCTGACCC+AGG | + | Chr2:29799509-29799528 | None:intergenic | 70.0% | |
ACTCCGCACCCCCTGACCCA+GGG | + | Chr2:29799508-29799527 | None:intergenic | 70.0% | |
CACCCCCTGACCCAGGGTTC+TGG | + | Chr2:29799502-29799521 | None:intergenic | 70.0% | |
CTAAGAGGTGGCTCCGCCCC+TGG | - | Chr2:29800440-29800459 | MsG0280008349.01.T01:intron | 70.0% | |
GAACCCTGGGTCAGGGGGTG+CGG | - | Chr2:29799502-29799521 | MsG0280008349.01.T01:intron | 70.0% | |
! | GGCTCCGCCCCTGGCTCTTA+GGG | - | Chr2:29800449-29800468 | MsG0280008349.01.T01:intron | 70.0% |
! | TGGCTCCGCCCCTGGCTCTT+AGG | - | Chr2:29800448-29800467 | MsG0280008349.01.T01:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 29798209 | 29801649 | 29798209 | ID=MsG0280008349.01;Name=MsG0280008349.01 |
Chr2 | mRNA | 29798209 | 29801649 | 29798209 | ID=MsG0280008349.01.T01;Parent=MsG0280008349.01;Name=MsG0280008349.01.T01;_AED=0.50;_eAED=0.50;_QI=186|1|1|1|1|1|2|250|340 |
Chr2 | exon | 29798209 | 29798969 | 29798209 | ID=MsG0280008349.01.T01:exon:6708;Parent=MsG0280008349.01.T01 |
Chr2 | exon | 29800952 | 29801649 | 29800952 | ID=MsG0280008349.01.T01:exon:6707;Parent=MsG0280008349.01.T01 |
Chr2 | five_prime_UTR | 29801464 | 29801649 | 29801464 | ID=MsG0280008349.01.T01:five_prime_utr;Parent=MsG0280008349.01.T01 |
Chr2 | CDS | 29800952 | 29801463 | 29800952 | ID=MsG0280008349.01.T01:cds;Parent=MsG0280008349.01.T01 |
Chr2 | CDS | 29798459 | 29798969 | 29798459 | ID=MsG0280008349.01.T01:cds;Parent=MsG0280008349.01.T01 |
Chr2 | three_prime_UTR | 29798209 | 29798458 | 29798209 | ID=MsG0280008349.01.T01:three_prime_utr;Parent=MsG0280008349.01.T01 |
Gene Sequence |
Protein sequence |