Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048588.01 | MsG0280010553.01 | 0.807648 | 4.561091e-50 | 2.554292e-47 |
| MsG0080048764.01 | MsG0280010553.01 | 0.810247 | 1.267314e-50 | 7.600924e-48 |
| MsG0180000197.01 | MsG0280010553.01 | 0.800212 | 1.602553e-48 | 7.419159e-46 |
| MsG0180000585.01 | MsG0280010553.01 | 0.813628 | 2.325034e-51 | 1.526187e-48 |
| MsG0180000669.01 | MsG0280010553.01 | 0.802265 | 6.091166e-49 | 2.970617e-46 |
| MsG0180000821.01 | MsG0280010553.01 | 0.802951 | 4.396900e-49 | 2.182101e-46 |
| MsG0180001009.01 | MsG0280010553.01 | 0.803658 | 3.138997e-49 | 1.586294e-46 |
| MsG0180001566.01 | MsG0280010553.01 | 0.801114 | 1.049002e-48 | 4.968987e-46 |
| MsG0180002071.01 | MsG0280010553.01 | 0.807392 | 5.168641e-50 | 2.875505e-47 |
| MsG0180002912.01 | MsG0280010553.01 | 0.806520 | 7.904303e-50 | 4.299239e-47 |
| MsG0180003444.01 | MsG0280010553.01 | 0.841151 | 5.655625e-58 | 8.235657e-55 |
| MsG0180004388.01 | MsG0280010553.01 | 0.830837 | 2.345178e-55 | 2.500046e-52 |
| MsG0180004730.01 | MsG0280010553.01 | 0.816014 | 6.877574e-52 | 4.817333e-49 |
| MsG0180005050.01 | MsG0280010553.01 | 0.808951 | 2.405603e-50 | 1.394093e-47 |
| MsG0180005125.01 | MsG0280010553.01 | 0.815873 | 7.397212e-52 | 5.160875e-49 |
| MsG0180005371.01 | MsG0280010553.01 | 0.824173 | 9.318508e-54 | 8.191828e-51 |
| MsG0180005944.01 | MsG0280010553.01 | 0.807294 | 5.423947e-50 | 3.009778e-47 |
| MsG0180005987.01 | MsG0280010553.01 | 0.831198 | 1.912797e-55 | 2.060879e-52 |
| MsG0180006016.01 | MsG0280010553.01 | 0.826455 | 2.688080e-54 | 2.522174e-51 |
| MsG0180006023.01 | MsG0280010553.01 | 0.853350 | 2.532395e-61 | 5.455706e-58 |
| MsG0280010551.01 | MsG0280010553.01 | 0.875509 | 2.913712e-68 | 1.363826e-64 |
| MsG0280010553.01 | MsG0280010614.01 | 0.817978 | 2.490720e-52 | 1.840862e-49 |
| MsG0280010553.01 | MsG0280010816.01 | 0.810803 | 9.614236e-51 | 5.852041e-48 |
| MsG0280010553.01 | MsG0280011070.01 | 0.831316 | 1.788550e-55 | 1.933864e-52 |
| MsG0280010553.01 | MsG0380011663.01 | 0.802793 | 4.739650e-49 | 2.342921e-46 |
| MsG0280010553.01 | MsG0380011754.01 | 0.824599 | 7.396406e-54 | 6.582712e-51 |
| MsG0280010553.01 | MsG0380012020.01 | 0.803644 | 3.159598e-49 | 1.596172e-46 |
| MsG0280010553.01 | MsG0380012033.01 | 0.802358 | 5.828015e-49 | 2.849164e-46 |
| MsG0280010553.01 | MsG0380012124.01 | 0.822463 | 2.337660e-53 | 1.958018e-50 |
| MsG0280010553.01 | MsG0380012458.01 | 0.822548 | 2.233345e-53 | 1.875311e-50 |
| MsG0280010553.01 | MsG0380014118.01 | 0.807446 | 5.035691e-50 | 2.805393e-47 |
| MsG0280010553.01 | MsG0380014162.01 | -0.837720 | 4.401038e-57 | 5.767241e-54 |
| MsG0280010553.01 | MsG0380014573.01 | 0.803118 | 4.061402e-49 | 2.024148e-46 |
| MsG0280010553.01 | MsG0380015779.01 | 0.832211 | 1.075877e-55 | 1.194394e-52 |
| MsG0280010553.01 | MsG0380015830.01 | 0.806895 | 6.586108e-50 | 3.616931e-47 |
| MsG0280010553.01 | MsG0380016227.01 | 0.805128 | 1.550445e-49 | 8.137686e-47 |
| MsG0280010553.01 | MsG0380016765.01 | 0.811848 | 5.700655e-51 | 3.567157e-48 |
| MsG0280010553.01 | MsG0380016859.01 | 0.812048 | 5.157199e-51 | 3.244448e-48 |
| MsG0280010553.01 | MsG0380017177.01 | 0.810423 | 1.161014e-50 | 6.995467e-48 |
| MsG0280010553.01 | MsG0380017232.01 | 0.810146 | 1.332284e-50 | 7.969467e-48 |
| MsG0280010553.01 | MsG0380017266.01 | -0.842322 | 2.775002e-58 | 4.192403e-55 |
| MsG0280010553.01 | MsG0380017604.01 | 0.801549 | 8.542953e-49 | 4.091195e-46 |
| MsG0280010553.01 | MsG0380018009.01 | 0.814202 | 1.737357e-51 | 1.158270e-48 |
| MsG0280010553.01 | MsG0480018635.01 | 0.814925 | 1.201900e-51 | 8.170738e-49 |
| MsG0280010553.01 | MsG0480018641.01 | 0.816902 | 4.352245e-52 | 3.123342e-49 |
| MsG0280010553.01 | MsG0480018787.01 | 0.822320 | 2.522514e-53 | 2.104339e-50 |
| MsG0280010553.01 | MsG0480018970.01 | 0.818984 | 1.473375e-52 | 1.119778e-49 |
| MsG0280010553.01 | MsG0480019871.01 | 0.815046 | 1.129865e-51 | 7.706542e-49 |
| MsG0280010553.01 | MsG0480020090.01 | 0.802275 | 6.061609e-49 | 2.956992e-46 |
| MsG0280010553.01 | MsG0480020242.01 | 0.844362 | 7.926374e-59 | 1.276515e-55 |
| MsG0280010553.01 | MsG0480020416.01 | 0.804904 | 1.726378e-49 | 9.009927e-47 |
| MsG0280010553.01 | MsG0480020445.01 | 0.837523 | 4.942356e-57 | 6.437326e-54 |
| MsG0280010553.01 | MsG0480020591.01 | 0.830613 | 2.661619e-55 | 2.818629e-52 |
| MsG0280010553.01 | MsG0480020791.01 | 0.804507 | 2.090023e-49 | 1.079484e-46 |
| MsG0280010553.01 | MsG0480021274.01 | 0.825071 | 5.724948e-54 | 5.164150e-51 |
| MsG0280010553.01 | MsG0480021772.01 | 0.809995 | 1.436191e-50 | 8.557709e-48 |
| MsG0280010553.01 | MsG0480021900.01 | 0.815297 | 9.938549e-52 | 6.825463e-49 |
| MsG0280010553.01 | MsG0480022115.01 | 0.822724 | 2.032707e-53 | 1.715302e-50 |
| MsG0280010553.01 | MsG0480022479.01 | 0.804743 | 1.865953e-49 | 9.697648e-47 |
| MsG0280010553.01 | MsG0480022480.01 | 0.849100 | 4.014857e-60 | 7.528971e-57 |
| MsG0280010553.01 | MsG0480022597.01 | 0.843701 | 1.191592e-58 | 1.879812e-55 |
| MsG0280010553.01 | MsG0480022598.01 | 0.803661 | 3.134191e-49 | 1.583999e-46 |
| MsG0280010553.01 | MsG0480023270.01 | 0.819370 | 1.203883e-52 | 9.245850e-50 |
| MsG0280010553.01 | MsG0480023707.01 | 0.807449 | 5.026546e-50 | 2.800606e-47 |
| MsG0280010553.01 | MsG0480023718.01 | 0.827108 | 1.876564e-54 | 1.794206e-51 |
| MsG0280010553.01 | MsG0580024073.01 | 0.817004 | 4.129368e-52 | 2.971826e-49 |
| MsG0280010553.01 | MsG0580024114.01 | 0.835676 | 1.460454e-56 | 1.798774e-53 |
| MsG0280010553.01 | MsG0580024304.01 | 0.801159 | 1.026753e-48 | 4.869186e-46 |
| MsG0280010553.01 | MsG0580024618.01 | 0.809436 | 1.894281e-50 | 1.112125e-47 |
| MsG0280010553.01 | MsG0580024733.01 | 0.843610 | 1.260830e-58 | 1.983558e-55 |
| MsG0280010553.01 | MsG0580025008.01 | 0.801014 | 1.099260e-48 | 5.194214e-46 |
| MsG0280010553.01 | MsG0580026023.01 | 0.807101 | 5.958370e-50 | 3.289601e-47 |
| MsG0280010553.01 | MsG0580027129.01 | 0.814306 | 1.647451e-51 | 1.101543e-48 |
| MsG0280010553.01 | MsG0580027169.01 | 0.805569 | 1.253031e-49 | 6.651382e-47 |
| MsG0280010553.01 | MsG0580027628.01 | 0.811676 | 6.214163e-51 | 3.870533e-48 |
| MsG0280010553.01 | MsG0580027745.01 | 0.809254 | 2.072363e-50 | 1.210803e-47 |
| MsG0280010553.01 | MsG0580027833.01 | 0.802169 | 6.373333e-49 | 3.100649e-46 |
| MsG0280010553.01 | MsG0580028000.01 | 0.805974 | 1.030286e-49 | 5.526420e-47 |
| MsG0280010553.01 | MsG0580028185.01 | 0.813659 | 2.288298e-51 | 1.503357e-48 |
| MsG0280010553.01 | MsG0580028990.01 | 0.821712 | 3.488997e-53 | 2.860519e-50 |
| MsG0280010553.01 | MsG0580029189.01 | 0.825675 | 4.118172e-54 | 3.779109e-51 |
| MsG0280010553.01 | MsG0580029594.01 | 0.808523 | 2.969912e-50 | 1.701947e-47 |
| MsG0280010553.01 | MsG0580029762.01 | 0.807729 | 4.384317e-50 | 2.460605e-47 |
| MsG0280010553.01 | MsG0580030235.01 | 0.849644 | 2.833540e-60 | 5.407437e-57 |
| MsG0280010553.01 | MsG0680030316.01 | 0.826107 | 3.252323e-54 | 3.021487e-51 |
| MsG0280010553.01 | MsG0680030684.01 | 0.820306 | 7.352524e-53 | 5.796452e-50 |
| MsG0280010553.01 | MsG0680030685.01 | 0.835820 | 1.343064e-56 | 1.661242e-53 |
| MsG0280010553.01 | MsG0680030841.01 | 0.814785 | 1.291150e-51 | 8.744754e-49 |
| MsG0280010553.01 | MsG0680031114.01 | 0.822778 | 1.974866e-53 | 1.669070e-50 |
| MsG0280010553.01 | MsG0680031133.01 | 0.803621 | 3.194845e-49 | 1.613045e-46 |
| MsG0280010553.01 | MsG0680031651.01 | 0.813221 | 2.856295e-51 | 1.854157e-48 |
| MsG0280010553.01 | MsG0680033391.01 | 0.808167 | 3.537660e-50 | 2.008462e-47 |
| MsG0280010553.01 | MsG0680035048.01 | 0.805230 | 1.475458e-49 | 7.764344e-47 |
| MsG0280010553.01 | MsG0780036177.01 | -0.816115 | 6.530501e-52 | 4.586824e-49 |
| MsG0280010553.01 | MsG0780036548.01 | 0.803613 | 3.206068e-49 | 1.618411e-46 |
| MsG0280010553.01 | MsG0780037515.01 | 0.817641 | 2.968196e-52 | 2.173616e-49 |
| MsG0280010553.01 | MsG0780037975.01 | 0.832648 | 8.385854e-56 | 9.432058e-53 |
| MsG0280010553.01 | MsG0780038444.01 | 0.810887 | 9.220000e-51 | 5.624974e-48 |
| MsG0280010553.01 | MsG0780038495.01 | 0.839586 | 1.450071e-57 | 2.011558e-54 |
| MsG0280010553.01 | MsG0780039389.01 | 0.803778 | 2.963206e-49 | 1.502149e-46 |
| MsG0280010553.01 | MsG0780039452.01 | 0.807858 | 4.115678e-50 | 2.317481e-47 |
| MsG0280010553.01 | MsG0780040044.01 | 0.825940 | 3.563072e-54 | 3.294670e-51 |
| MsG0280010553.01 | MsG0780040488.01 | 0.819750 | 9.855792e-53 | 7.650910e-50 |
| MsG0280010553.01 | MsG0780040726.01 | 0.818508 | 1.889897e-52 | 1.417400e-49 |
| MsG0280010553.01 | MsG0780040947.01 | 0.848141 | 7.406591e-60 | 1.345987e-56 |
| MsG0280010553.01 | MsG0780041376.01 | 0.834611 | 2.711567e-56 | 3.234593e-53 |
| MsG0280010553.01 | MsG0780041469.01 | 0.812668 | 3.776661e-51 | 2.415843e-48 |
| MsG0280010553.01 | MsG0780041754.01 | 0.818412 | 1.986448e-52 | 1.486015e-49 |
| MsG0280010553.01 | MsG0880042811.01 | 0.831517 | 1.596100e-55 | 1.736180e-52 |
| MsG0280010553.01 | MsG0880043252.01 | 0.812835 | 3.470688e-51 | 2.229757e-48 |
| MsG0280010553.01 | MsG0880044237.01 | 0.818921 | 1.523286e-52 | 1.155660e-49 |
| MsG0280010553.01 | MsG0880045583.01 | 0.820933 | 5.279210e-53 | 4.235147e-50 |
| MsG0280010553.01 | MsG0880045897.01 | -0.807487 | 4.934483e-50 | 2.751993e-47 |
| MsG0280010553.01 | MsG0880046669.01 | 0.844437 | 7.564963e-59 | 1.221204e-55 |
| MsG0280010553.01 | MsG0880046733.01 | 0.821385 | 4.152401e-53 | 3.373232e-50 |
| MsG0280010553.01 | MsG0880046762.01 | 0.824071 | 9.846392e-54 | 8.630731e-51 |
| MsG0280010553.01 | MsG0880047425.01 | 0.816502 | 5.349165e-52 | 3.796835e-49 |
| MsG0280010553.01 | MsG0880047497.01 | 0.824107 | 9.655722e-54 | 8.472002e-51 |
| MsG0280006692.01 | MsG0280010553.01 | 0.804518 | 2.079223e-49 | 1.074200e-46 |
| MsG0280007484.01 | MsG0280010553.01 | 0.802600 | 5.194989e-49 | 2.555297e-46 |
| MsG0280007609.01 | MsG0280010553.01 | 0.874002 | 9.490013e-68 | 4.203018e-64 |
| MsG0280007610.01 | MsG0280010553.01 | 0.812657 | 3.796221e-51 | 2.427679e-48 |
| MsG0280008270.01 | MsG0280010553.01 | 0.817300 | 3.541570e-52 | 2.569378e-49 |
| MsG0280008349.01 | MsG0280010553.01 | 0.818254 | 2.158076e-52 | 1.607117e-49 |
| MsG0280010389.01 | MsG0280010553.01 | 0.862327 | 5.480013e-64 | 1.598589e-60 |
| MsG0280010416.01 | MsG0280010553.01 | 0.805346 | 1.395267e-49 | 7.364361e-47 |
| MsG0280010443.01 | MsG0280010553.01 | 0.805119 | 1.556969e-49 | 8.170098e-47 |
| MsG0280010547.01 | MsG0280010553.01 | 0.848347 | 6.495442e-60 | 1.188478e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 111 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGACCATTTGAGGAATT+TGG | 0.091335 | 2:+71388727 | MsG0280010553.01.T01:CDS |
| CTTATTTGGTTCCTATATAA+TGG | 0.192243 | 2:+71389197 | MsG0280010553.01.T01:three_prime_UTR |
| GGCTAAGTCCATGTATGTTT+TGG | 0.198774 | 2:+71388424 | MsG0280010553.01.T01:CDS |
| GGTATTCTGAAACGCTTATT+TGG | 0.210433 | 2:+71389183 | MsG0280010553.01.T01:three_prime_UTR |
| CTACTATCTGATGGTGTTAT+AGG | 0.221334 | 2:+71389103 | MsG0280010553.01.T01:three_prime_UTR |
| TCCCATTGAATATAACAATT+TGG | 0.226031 | 2:+71389013 | MsG0280010553.01.T01:three_prime_UTR |
| ACGTTGCAAACAAAGCAAAA+AGG | 0.281082 | 2:-71389049 | None:intergenic |
| CACGGTGCTTGATGTAATAA+AGG | 0.314777 | 2:-71387154 | None:intergenic |
| CTCCAAATTGTTATATTCAA+TGG | 0.319398 | 2:-71389015 | None:intergenic |
| AATTCTACAACCCATTATAT+AGG | 0.328823 | 2:-71389208 | None:intergenic |
| TTATTTGGTTCCTATATAAT+GGG | 0.336357 | 2:+71389198 | MsG0280010553.01.T01:three_prime_UTR |
| GATACCTCTGTAGACTATTC+GGG | 0.342734 | 2:+71388500 | MsG0280010553.01.T01:CDS |
| TTGTGTACAGCTGGATAAAA+AGG | 0.352991 | 2:-71387475 | None:intergenic |
| TGATACCTCTGTAGACTATT+CGG | 0.353158 | 2:+71388499 | MsG0280010553.01.T01:CDS |
| ATTGACCATTTGAGGAATTT+GGG | 0.370009 | 2:+71388728 | MsG0280010553.01.T01:CDS |
| ATTGAAATATGAATTATGTT+TGG | 0.374663 | 2:-71387603 | None:intergenic |
| TCCAAATTGTTATATTCAAT+GGG | 0.378237 | 2:-71389014 | None:intergenic |
| TCTCTTTCTTCTTCCTCTGA+TGG | 0.381521 | 2:+71387115 | MsG0280010553.01.T01:five_prime_UTR |
| TTGCTTTGTTTGCAACGTTT+AGG | 0.389107 | 2:+71389054 | MsG0280010553.01.T01:three_prime_UTR |
| ATCATCTTCGTAATCGTAAT+CGG | 0.391487 | 2:-71387685 | None:intergenic |
| ATGGGAAAAGTAAAATCAAA+TGG | 0.394524 | 2:-71388996 | None:intergenic |
| TGAAGATGATTGGGAGGTTA+TGG | 0.396165 | 2:+71388661 | MsG0280010553.01.T01:CDS |
| AAAGGGAGGCTTTAGCGCTT+AGG | 0.397593 | 2:-71387061 | None:intergenic |
| TAACAATTCAACTTTGGTTG+TGG | 0.405054 | 2:-71387219 | None:intergenic |
| TTTGAGGAATTTGGGAAGTT+GGG | 0.409092 | 2:+71388736 | MsG0280010553.01.T01:CDS |
| AGGAGCAGTATGAAGATGAT+TGG | 0.416315 | 2:+71388651 | MsG0280010553.01.T01:CDS |
| GGAGGCATTTGATAACTCTA+AGG | 0.416449 | 2:+71388631 | MsG0280010553.01.T01:CDS |
| ATTTGAGGAATTTGGGAAGT+TGG | 0.417251 | 2:+71388735 | MsG0280010553.01.T01:CDS |
| CTTTAGAGAAATTAATAAGT+AGG | 0.420436 | 2:+71388955 | MsG0280010553.01.T01:three_prime_UTR |
| TTTAGCGCTTAGGGTTATAC+AGG | 0.421646 | 2:-71387051 | None:intergenic |
| AACAATTCAACTTTGGTTGT+GGG | 0.426993 | 2:-71387218 | None:intergenic |
| TAGAATTAACAATTCAACTT+TGG | 0.429073 | 2:-71387225 | None:intergenic |
| TTAGTTTGATCTGACGGCTT+AGG | 0.429144 | 2:+71387452 | MsG0280010553.01.T01:five_prime_UTR |
| CGACGACGATGCTTGGGATA+AGG | 0.434174 | 2:+71388466 | MsG0280010553.01.T01:CDS |
| AAGGGAGGCTTTAGCGCTTA+GGG | 0.435258 | 2:-71387060 | None:intergenic |
| GATTGATCTCCCTCCTCAAA+TGG | 0.443391 | 2:-71388593 | None:intergenic |
| AAAAGCCGACGACGATGCTT+GGG | 0.450005 | 2:+71388460 | MsG0280010553.01.T01:CDS |
| AATTCCTTTGAATGCGCAAA+AGG | 0.451717 | 2:-71388374 | None:intergenic |
| GGAGCAGTATGAAGATGATT+GGG | 0.452002 | 2:+71388652 | MsG0280010553.01.T01:CDS |
| TGATAAGTGCATTGAAGTCT+TGG | 0.459378 | 2:+71388403 | MsG0280010553.01.T01:CDS |
| AACTTCCCAAATTCCTCAAA+TGG | 0.460033 | 2:-71388733 | None:intergenic |
| TGGGAGGTTATGGCTGAGAA+GGG | 0.462561 | 2:+71388671 | MsG0280010553.01.T01:CDS |
| CTCTGGAGAGGAACCATTTG+AGG | 0.464363 | 2:+71388580 | MsG0280010553.01.T01:CDS |
| TGTAGAGGACAAGAAGAAAC+AGG | 0.466429 | 2:+71388906 | MsG0280010553.01.T01:three_prime_UTR |
| GAAAAGTGTTTGAGACGAAA+GGG | 0.470255 | 2:-71387092 | None:intergenic |
| TGATCTACATCTGGTAGATA+AGG | 0.477596 | 2:+71388343 | MsG0280010553.01.T01:CDS |
| AGAAAAGTGTTTGAGACGAA+AGG | 0.485916 | 2:-71387093 | None:intergenic |
| TGCGTTGCATTGACCATTTG+AGG | 0.489610 | 2:+71388720 | MsG0280010553.01.T01:CDS |
| TCATTTCACATGATAGCCAT+TGG | 0.494346 | 2:-71387547 | None:intergenic |
| AAATATGAATTATGTTTGGA+GGG | 0.497454 | 2:-71387599 | None:intergenic |
| ACGTCTTAATGATCTACATC+TGG | 0.497872 | 2:+71388334 | MsG0280010553.01.T01:CDS |
| GAAATATGAATTATGTTTGG+AGG | 0.507205 | 2:-71387600 | None:intergenic |
| TATCTACGGTTGTGTACAGC+TGG | 0.507817 | 2:-71387484 | None:intergenic |
| GGAGGTTATGGCTGAGAAGG+GGG | 0.509261 | 2:+71388673 | MsG0280010553.01.T01:CDS |
| CATTGAATATAACAATTTGG+AGG | 0.509995 | 2:+71389016 | MsG0280010553.01.T01:three_prime_UTR |
| TGGGAAAAGTAAAATCAAAT+GGG | 0.510457 | 2:-71388995 | None:intergenic |
| TGATCTTAACATCCATCATA+AGG | 0.511158 | 2:+71388784 | MsG0280010553.01.T01:CDS |
| ATTGTCCTCATCAAGAGAAA+AGG | 0.511944 | 2:-71388834 | None:intergenic |
| TCTTGTACATCTCCTTATGA+TGG | 0.516604 | 2:-71388796 | None:intergenic |
| AAAAGAAAGTAAAATCCAAT+GGG | 0.521897 | 2:-71389143 | None:intergenic |
| GGGAAGTTGGGACCAACTCA+TGG | 0.526539 | 2:+71388748 | MsG0280010553.01.T01:CDS |
| TAGTTGTTAGTTTGATCTGA+CGG | 0.529078 | 2:+71387446 | MsG0280010553.01.T01:five_prime_UTR |
| TTGGGAGGTTATGGCTGAGA+AGG | 0.529156 | 2:+71388670 | MsG0280010553.01.T01:CDS |
| GGAAGAGGAAAAGAAGAAAG+AGG | 0.532453 | 2:+71388871 | MsG0280010553.01.T01:CDS |
| CAGCCACCCCAAAACATACA+TGG | 0.532878 | 2:-71388432 | None:intergenic |
| CTTTGTTTGCAACGTTTAGG+TGG | 0.533724 | 2:+71389057 | MsG0280010553.01.T01:three_prime_UTR |
| TAAAAGAAAGTAAAATCCAA+TGG | 0.534265 | 2:-71389144 | None:intergenic |
| GGGAGGTTATGGCTGAGAAG+GGG | 0.538227 | 2:+71388672 | MsG0280010553.01.T01:CDS |
| TAAGAAAGCTCCAAAGGAAG+AGG | 0.539537 | 2:+71388856 | MsG0280010553.01.T01:CDS |
| TCACGGGAGACTTAGATCTA+CGG | 0.540098 | 2:-71387728 | None:intergenic |
| ACGGTGCTTGATGTAATAAA+GGG | 0.542087 | 2:-71387153 | None:intergenic |
| CGCTTAGGGTTATACAGGAG+AGG | 0.548084 | 2:-71387046 | None:intergenic |
| CAAGCTTCAACAATCATCAA+TGG | 0.548881 | 2:+71387641 | MsG0280010553.01.T01:exon |
| TCTGATACCTCTGAAGACTC+TGG | 0.550583 | 2:+71388563 | MsG0280010553.01.T01:CDS |
| ATATTGTTAATAATGCCCAT+TGG | 0.552450 | 2:+71389128 | MsG0280010553.01.T01:three_prime_UTR |
| GGACAAGAAGAAACAGGACC+TGG | 0.555173 | 2:+71388912 | MsG0280010553.01.T01:three_prime_UTR |
| CTACGGTGTGAAACACGCTT+AGG | 0.564072 | 2:-71387711 | None:intergenic |
| GATTAAAACATTCATATCTA+CGG | 0.569804 | 2:-71387498 | None:intergenic |
| TCATCCAGTAGTGTCCAAGT+TGG | 0.577872 | 2:+71389269 | MsG0280010553.01.T01:three_prime_UTR |
| AGTCATCATTCTCCATGAGT+TGG | 0.581036 | 2:-71388760 | None:intergenic |
| ACGAAAGGGAAGATAACAAA+GGG | 0.581131 | 2:-71387078 | None:intergenic |
| TCAATCTGAAGTAGATGTTG+AGG | 0.583778 | 2:+71388610 | MsG0280010553.01.T01:CDS |
| AATGGCGTCATCTTCTTCCG+TGG | 0.589408 | 2:+71387659 | MsG0280010553.01.T01:exon |
| CAGATCAAACTAACAACTAA+CGG | 0.595583 | 2:-71387442 | None:intergenic |
| GTGGTAACTGTTGCCATCAG+AGG | 0.599667 | 2:-71387128 | None:intergenic |
| TGGAGAGGAACCATTTGAGG+AGG | 0.600272 | 2:+71388583 | MsG0280010553.01.T01:CDS |
| CTTATCCCAAGCATCGTCGT+CGG | 0.606103 | 2:-71388465 | None:intergenic |
| GGACAATAAGAAAGCTCCAA+AGG | 0.608201 | 2:+71388850 | MsG0280010553.01.T01:CDS |
| TACACTATACTACTATCTGA+TGG | 0.608406 | 2:+71389094 | MsG0280010553.01.T01:three_prime_UTR |
| TAGAATTAAAGACATGATAG+TGG | 0.610779 | 2:+71389224 | MsG0280010553.01.T01:three_prime_UTR |
| ATCTGAAGTAGATGTTGAGG+AGG | 0.613206 | 2:+71388613 | MsG0280010553.01.T01:CDS |
| GATCTCACAGCTAAAACCTA+CGG | 0.616751 | 2:-71387525 | None:intergenic |
| GCAGTATGAAGATGATTGGG+AGG | 0.625808 | 2:+71388655 | MsG0280010553.01.T01:CDS |
| GGAGAGGAACCATTTGAGGA+GGG | 0.635868 | 2:+71388584 | MsG0280010553.01.T01:CDS |
| ATATAAAATGATTAAAGACA+CGG | 0.638078 | 2:-71387172 | None:intergenic |
| AGGACTGAAGAAAACTGTAG+AGG | 0.645554 | 2:+71388891 | MsG0280010553.01.T01:exon |
| TACCTCTGAAGACTCTGGAG+AGG | 0.646793 | 2:+71388568 | MsG0280010553.01.T01:CDS |
| GACAAGAAGAAACAGGACCT+GGG | 0.647578 | 2:+71388913 | MsG0280010553.01.T01:three_prime_UTR |
| GTAATCGTAATCGGTTTCCA+CGG | 0.653333 | 2:-71387676 | None:intergenic |
| ATACCTCTGTAGACTATTCG+GGG | 0.654853 | 2:+71388501 | MsG0280010553.01.T01:CDS |
| CTTGATGTAATAAAGGGTGG+TGG | 0.654928 | 2:-71387147 | None:intergenic |
| GACGAAAGGGAAGATAACAA+AGG | 0.656116 | 2:-71387079 | None:intergenic |
| AGGGTTATACAGGAGAGGAG+AGG | 0.668300 | 2:-71387041 | None:intergenic |
| TTCCTCTCCAGAGTCTTCAG+AGG | 0.678080 | 2:-71388570 | None:intergenic |
| CTCACACTGTGCTATCACCC+AGG | 0.684973 | 2:-71388930 | None:intergenic |
| AGAGGAGAGGAGAAGAGACG+AGG | 0.696297 | 2:-71387028 | None:intergenic |
| AAAGGGAAGATAACAAAGGG+AGG | 0.703136 | 2:-71387075 | None:intergenic |
| TACCTCTGTAGACTATTCGG+GGG | 0.707008 | 2:+71388502 | MsG0280010553.01.T01:CDS |
| ATCAAACTAACAACTAACGG+TGG | 0.712221 | 2:-71387439 | None:intergenic |
| GTGCTTGATGTAATAAAGGG+TGG | 0.740368 | 2:-71387150 | None:intergenic |
| AGAAAAGGTGAGAAACAACA+CGG | 0.759293 | 2:-71388819 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAATGATTAAAGACA+CGG | - | Chr2:71387175-71387194 | None:intergenic | 15.0% |
| !! | ATTGAAATATGAATTATGTT+TGG | - | Chr2:71387606-71387625 | None:intergenic | 15.0% |
| !! | TAAGAGAAAAATTAAGAAAA+AGG | - | Chr2:71388282-71388301 | None:intergenic | 15.0% |
| !!! | GATTTTACTTTCTTTTAATA+AGG | + | Chr2:71389150-71389169 | MsG0280010553.01.T01:three_prime_UTR | 15.0% |
| !!! | TTTTATATGGAAATTTTACA+TGG | + | Chr2:71387187-71387206 | MsG0280010553.01.T01:five_prime_UTR | 15.0% |
| !! | AAAAGAAAGTAAAATCCAAT+GGG | - | Chr2:71389146-71389165 | None:intergenic | 20.0% |
| !! | AAATATGAATTATGTTTGGA+GGG | - | Chr2:71387602-71387621 | None:intergenic | 20.0% |
| !! | AAGAAAAAAATGAAAGATTG+GGG | - | Chr2:71387292-71387311 | None:intergenic | 20.0% |
| !! | ACCTGAAATATTAGAAAAAA+TGG | - | Chr2:71388312-71388331 | None:intergenic | 20.0% |
| !! | AGAAGAAAAAAATGAAAGAT+TGG | - | Chr2:71387294-71387313 | None:intergenic | 20.0% |
| !! | GAAGAAAAAAATGAAAGATT+GGG | - | Chr2:71387293-71387312 | None:intergenic | 20.0% |
| !! | GATTAAAACATTCATATCTA+CGG | - | Chr2:71387501-71387520 | None:intergenic | 20.0% |
| !! | TAAAAGAAAGTAAAATCCAA+TGG | - | Chr2:71389147-71389166 | None:intergenic | 20.0% |
| !! | TAGAATTAACAATTCAACTT+TGG | - | Chr2:71387228-71387247 | None:intergenic | 20.0% |
| !! | TCACAAATGAACATATAAAT+AGG | - | Chr2:71388185-71388204 | None:intergenic | 20.0% |
| !! | TCCAAATTGTTATATTCAAT+GGG | - | Chr2:71389017-71389036 | None:intergenic | 20.0% |
| !!! | CTTTAGAGAAATTAATAAGT+AGG | + | Chr2:71388955-71388974 | MsG0280010553.01.T01:three_prime_UTR | 20.0% |
| !!! | GTGTCTTTAATCATTTTATA+TGG | + | Chr2:71387174-71387193 | MsG0280010553.01.T01:five_prime_UTR | 20.0% |
| !!! | TCCATTTTTTCTAATATTTC+AGG | + | Chr2:71388308-71388327 | MsG0280010553.01.T01:intron | 20.0% |
| !!! | TTATTTGGTTCCTATATAAT+GGG | + | Chr2:71389198-71389217 | MsG0280010553.01.T01:three_prime_UTR | 20.0% |
| !!! | TTTTAATAAGGCATTAGTAT+TGG | + | Chr2:71389162-71389181 | MsG0280010553.01.T01:three_prime_UTR | 20.0% |
| ! | AATTCTACAACCCATTATAT+AGG | - | Chr2:71389211-71389230 | None:intergenic | 25.0% |
| ! | AGAAAAAAATGAAAGATTGG+GGG | - | Chr2:71387291-71387310 | None:intergenic | 25.0% |
| ! | ATATTGTTAATAATGCCCAT+TGG | + | Chr2:71388980-71388999 | MsG0280010553.01.T01:three_prime_UTR | 25.0% |
| ! | ATGGGAAAAGTAAAATCAAA+TGG | - | Chr2:71388999-71389018 | None:intergenic | 25.0% |
| ! | CACGAGAAAAAAAAATACTT+TGG | - | Chr2:71387251-71387270 | None:intergenic | 25.0% |
| ! | CATTGAATATAACAATTTGG+AGG | + | Chr2:71389016-71389035 | MsG0280010553.01.T01:three_prime_UTR | 25.0% |
| ! | CATTTGAAAAATAGTAGATC+TGG | - | Chr2:71387326-71387345 | None:intergenic | 25.0% |
| ! | CTCCAAATTGTTATATTCAA+TGG | - | Chr2:71389018-71389037 | None:intergenic | 25.0% |
| ! | GAAATATGAATTATGTTTGG+AGG | - | Chr2:71387603-71387622 | None:intergenic | 25.0% |
| ! | TAGAATTAAAGACATGATAG+TGG | + | Chr2:71389224-71389243 | MsG0280010553.01.T01:three_prime_UTR | 25.0% |
| ! | TCCCATTGAATATAACAATT+TGG | + | Chr2:71389013-71389032 | MsG0280010553.01.T01:three_prime_UTR | 25.0% |
| ! | TGAAAAAATTAGCTATCGAT+TGG | + | Chr2:71387748-71387767 | MsG0280010553.01.T01:CDS | 25.0% |
| ! | TGGGAAAAGTAAAATCAAAT+GGG | - | Chr2:71388998-71389017 | None:intergenic | 25.0% |
| ! | TTATATGTTCATTTGTGATC+TGG | + | Chr2:71388187-71388206 | MsG0280010553.01.T01:intron | 25.0% |
| !! | AAAAAATTAGCTATCGATTG+GGG | + | Chr2:71387750-71387769 | MsG0280010553.01.T01:CDS | 25.0% |
| !! | CTTATTTGGTTCCTATATAA+TGG | + | Chr2:71389197-71389216 | MsG0280010553.01.T01:three_prime_UTR | 25.0% |
| !! | GAAAAAATTAGCTATCGATT+GGG | + | Chr2:71387749-71387768 | MsG0280010553.01.T01:CDS | 25.0% |
| !! | TGCAAAATATTTTTCCAACT+TGG | - | Chr2:71389286-71389305 | None:intergenic | 25.0% |
| !!! | ATCGATAGCTAATTTTTTCA+CGG | - | Chr2:71387748-71387767 | None:intergenic | 25.0% |
| AACAATTCAACTTTGGTTGT+GGG | - | Chr2:71387221-71387240 | None:intergenic | 30.0% | |
| ATCATCTTCGTAATCGTAAT+CGG | - | Chr2:71387688-71387707 | None:intergenic | 30.0% | |
| ATTGACCATTTGAGGAATTT+GGG | + | Chr2:71388728-71388747 | MsG0280010553.01.T01:CDS | 30.0% | |
| CAGATCAAACTAACAACTAA+CGG | - | Chr2:71387445-71387464 | None:intergenic | 30.0% | |
| TAACAATTCAACTTTGGTTG+TGG | - | Chr2:71387222-71387241 | None:intergenic | 30.0% | |
| TACACTATACTACTATCTGA+TGG | + | Chr2:71389094-71389113 | MsG0280010553.01.T01:three_prime_UTR | 30.0% | |
| TGATCTTAACATCCATCATA+AGG | + | Chr2:71388784-71388803 | MsG0280010553.01.T01:CDS | 30.0% | |
| ! | TAGTTGTTAGTTTGATCTGA+CGG | + | Chr2:71387446-71387465 | MsG0280010553.01.T01:five_prime_UTR | 30.0% |
| ! | TGATTCTATTTGAGATGATC+TGG | + | Chr2:71388093-71388112 | MsG0280010553.01.T01:intron | 30.0% |
| !! | GTGTTCATTTGATTTTCTGA+AGG | + | Chr2:71387902-71387921 | MsG0280010553.01.T01:intron | 30.0% |
| !!! | AATGTTTTAATCGTATCCGT+AGG | + | Chr2:71387509-71387528 | MsG0280010553.01.T01:five_prime_UTR | 30.0% |
| !!! | TCGATAGCTAATTTTTTCAC+GGG | - | Chr2:71387747-71387766 | None:intergenic | 30.0% |
| !!! | TTCTTCTCGTGATTTTTTTC+TGG | + | Chr2:71387362-71387381 | MsG0280010553.01.T01:five_prime_UTR | 30.0% |
| AAAAACCTTCAGATCTCGAA+TGG | - | Chr2:71387827-71387846 | None:intergenic | 35.0% | |
| AACTTCCCAAATTCCTCAAA+TGG | - | Chr2:71388736-71388755 | None:intergenic | 35.0% | |
| AATTCCTTTGAATGCGCAAA+AGG | - | Chr2:71388377-71388396 | None:intergenic | 35.0% | |
| ACGAAAGGGAAGATAACAAA+GGG | - | Chr2:71387081-71387100 | None:intergenic | 35.0% | |
| ACGGTGCTTGATGTAATAAA+GGG | - | Chr2:71387156-71387175 | None:intergenic | 35.0% | |
| ACGTCTTAATGATCTACATC+TGG | + | Chr2:71388334-71388353 | MsG0280010553.01.T01:CDS | 35.0% | |
| ACGTTGCAAACAAAGCAAAA+AGG | - | Chr2:71389052-71389071 | None:intergenic | 35.0% | |
| AGAAAAGGTGAGAAACAACA+CGG | - | Chr2:71388822-71388841 | None:intergenic | 35.0% | |
| ATCAAACTAACAACTAACGG+TGG | - | Chr2:71387442-71387461 | None:intergenic | 35.0% | |
| ATTGTCCTCATCAAGAGAAA+AGG | - | Chr2:71388837-71388856 | None:intergenic | 35.0% | |
| ATTTGAGGAATTTGGGAAGT+TGG | + | Chr2:71388735-71388754 | MsG0280010553.01.T01:CDS | 35.0% | |
| CAAGCTTCAACAATCATCAA+TGG | + | Chr2:71387641-71387660 | MsG0280010553.01.T01:exon | 35.0% | |
| CATTGACCATTTGAGGAATT+TGG | + | Chr2:71388727-71388746 | MsG0280010553.01.T01:CDS | 35.0% | |
| CGTTGCAAACAAAGCAAAAA+GGG | - | Chr2:71389051-71389070 | None:intergenic | 35.0% | |
| GTTGCAAACAAAGCAAAAAG+GGG | - | Chr2:71389050-71389069 | None:intergenic | 35.0% | |
| TCATTTCACATGATAGCCAT+TGG | - | Chr2:71387550-71387569 | None:intergenic | 35.0% | |
| TCTTGTACATCTCCTTATGA+TGG | - | Chr2:71388799-71388818 | None:intergenic | 35.0% | |
| TGATAAGTGCATTGAAGTCT+TGG | + | Chr2:71388403-71388422 | MsG0280010553.01.T01:CDS | 35.0% | |
| TGATACCTCTGTAGACTATT+CGG | + | Chr2:71388499-71388518 | MsG0280010553.01.T01:CDS | 35.0% | |
| TGATCTACATCTGGTAGATA+AGG | + | Chr2:71388343-71388362 | MsG0280010553.01.T01:CDS | 35.0% | |
| TTGTGTACAGCTGGATAAAA+AGG | - | Chr2:71387478-71387497 | None:intergenic | 35.0% | |
| TTTGAGGAATTTGGGAAGTT+GGG | + | Chr2:71388736-71388755 | MsG0280010553.01.T01:CDS | 35.0% | |
| ! | CTAAGTCCATGTATGTTTTG+GGG | + | Chr2:71388426-71388445 | MsG0280010553.01.T01:CDS | 35.0% |
| ! | GCTAAGTCCATGTATGTTTT+GGG | + | Chr2:71388425-71388444 | MsG0280010553.01.T01:CDS | 35.0% |
| ! | TCAATCTGAAGTAGATGTTG+AGG | + | Chr2:71388610-71388629 | MsG0280010553.01.T01:CDS | 35.0% |
| ! | TTCTTCTTTTCCTCTTCCTT+TGG | - | Chr2:71388869-71388888 | None:intergenic | 35.0% |
| !! | AGAAAAGTGTTTGAGACGAA+AGG | - | Chr2:71387096-71387115 | None:intergenic | 35.0% |
| !! | CGTTGATTCGTTATCATATG+CGG | + | Chr2:71387880-71387899 | MsG0280010553.01.T01:intron | 35.0% |
| !! | CTACTATCTGATGGTGTTAT+AGG | + | Chr2:71389103-71389122 | MsG0280010553.01.T01:three_prime_UTR | 35.0% |
| !! | GAAAAGTGTTTGAGACGAAA+GGG | - | Chr2:71387095-71387114 | None:intergenic | 35.0% |
| !! | GGTATTCTGAAACGCTTATT+TGG | + | Chr2:71389183-71389202 | MsG0280010553.01.T01:three_prime_UTR | 35.0% |
| !! | TTGCTTTGTTTGCAACGTTT+AGG | + | Chr2:71389054-71389073 | MsG0280010553.01.T01:three_prime_UTR | 35.0% |
| !! | TTTAGGTGGATTTTGCTTGT+TGG | + | Chr2:71389071-71389090 | MsG0280010553.01.T01:three_prime_UTR | 35.0% |
| AAAGGGAAGATAACAAAGGG+AGG | - | Chr2:71387078-71387097 | None:intergenic | 40.0% | |
| AGGACTGAAGAAAACTGTAG+AGG | + | Chr2:71388891-71388910 | MsG0280010553.01.T01:exon | 40.0% | |
| AGGAGCAGTATGAAGATGAT+TGG | + | Chr2:71388651-71388670 | MsG0280010553.01.T01:CDS | 40.0% | |
| AGTCATCATTCTCCATGAGT+TGG | - | Chr2:71388763-71388782 | None:intergenic | 40.0% | |
| ATACCTCTGTAGACTATTCG+GGG | + | Chr2:71388501-71388520 | MsG0280010553.01.T01:CDS | 40.0% | |
| CACGGTGCTTGATGTAATAA+AGG | - | Chr2:71387157-71387176 | None:intergenic | 40.0% | |
| CTTGATGTAATAAAGGGTGG+TGG | - | Chr2:71387150-71387169 | None:intergenic | 40.0% | |
| GACGAAAGGGAAGATAACAA+AGG | - | Chr2:71387082-71387101 | None:intergenic | 40.0% | |
| GATACCTCTGTAGACTATTC+GGG | + | Chr2:71388500-71388519 | MsG0280010553.01.T01:CDS | 40.0% | |
| GATCTCACAGCTAAAACCTA+CGG | - | Chr2:71387528-71387547 | None:intergenic | 40.0% | |
| GGAAGAGGAAAAGAAGAAAG+AGG | + | Chr2:71388871-71388890 | MsG0280010553.01.T01:CDS | 40.0% | |
| GGACAATAAGAAAGCTCCAA+AGG | + | Chr2:71388850-71388869 | MsG0280010553.01.T01:CDS | 40.0% | |
| GGAGCAGTATGAAGATGATT+GGG | + | Chr2:71388652-71388671 | MsG0280010553.01.T01:CDS | 40.0% | |
| GTGCTTGATGTAATAAAGGG+TGG | - | Chr2:71387153-71387172 | None:intergenic | 40.0% | |
| TAAGAAAGCTCCAAAGGAAG+AGG | + | Chr2:71388856-71388875 | MsG0280010553.01.T01:CDS | 40.0% | |
| TATTCGGGGGAACTTGATTT+GGG | + | Chr2:71388515-71388534 | MsG0280010553.01.T01:CDS | 40.0% | |
| TCTCTTTCTTCTTCCTCTGA+TGG | + | Chr2:71387115-71387134 | MsG0280010553.01.T01:five_prime_UTR | 40.0% | |
| TGAAGATGATTGGGAGGTTA+TGG | + | Chr2:71388661-71388680 | MsG0280010553.01.T01:CDS | 40.0% | |
| TGATTCCATTCGAGATCTGA+AGG | + | Chr2:71387819-71387838 | MsG0280010553.01.T01:intron | 40.0% | |
| TGTAGAGGACAAGAAGAAAC+AGG | + | Chr2:71388906-71388925 | MsG0280010553.01.T01:three_prime_UTR | 40.0% | |
| TTTAGCGCTTAGGGTTATAC+AGG | - | Chr2:71387054-71387073 | None:intergenic | 40.0% | |
| TTTGGGGGAACAATCTGATA+AGG | + | Chr2:71388532-71388551 | MsG0280010553.01.T01:CDS | 40.0% | |
| ! | ACATCCTTTTGCGCATTCAA+AGG | + | Chr2:71388370-71388389 | MsG0280010553.01.T01:CDS | 40.0% |
| ! | ATCTGAAGTAGATGTTGAGG+AGG | + | Chr2:71388613-71388632 | MsG0280010553.01.T01:CDS | 40.0% |
| ! | CTTTGTTTGCAACGTTTAGG+TGG | + | Chr2:71389057-71389076 | MsG0280010553.01.T01:three_prime_UTR | 40.0% |
| ! | GGCTAAGTCCATGTATGTTT+TGG | + | Chr2:71388424-71388443 | MsG0280010553.01.T01:CDS | 40.0% |
| ! | GTAATCGTAATCGGTTTCCA+CGG | - | Chr2:71387679-71387698 | None:intergenic | 40.0% |
| ! | TCTCACCTTTTCTCTTGATG+AGG | + | Chr2:71388829-71388848 | MsG0280010553.01.T01:CDS | 40.0% |
| ! | TTAGTTTGATCTGACGGCTT+AGG | + | Chr2:71387452-71387471 | MsG0280010553.01.T01:five_prime_UTR | 40.0% |
| ! | TTTTCCAACTTGGACACTAC+TGG | - | Chr2:71389276-71389295 | None:intergenic | 40.0% |
| !! | GGAGGCATTTGATAACTCTA+AGG | + | Chr2:71388631-71388650 | MsG0280010553.01.T01:CDS | 40.0% |
| !!! | GTTTTAGCTGTGAGATCCAA+TGG | + | Chr2:71387531-71387550 | MsG0280010553.01.T01:five_prime_UTR | 40.0% |
| CTATTCGGGGGAACTTGATT+TGG | + | Chr2:71388514-71388533 | MsG0280010553.01.T01:CDS | 45.0% | |
| GACAAGAAGAAACAGGACCT+GGG | + | Chr2:71388913-71388932 | MsG0280010553.01.T01:three_prime_UTR | 45.0% | |
| GATTGATCTCCCTCCTCAAA+TGG | - | Chr2:71388596-71388615 | None:intergenic | 45.0% | |
| GCAGTATGAAGATGATTGGG+AGG | + | Chr2:71388655-71388674 | MsG0280010553.01.T01:CDS | 45.0% | |
| TACCTCTGTAGACTATTCGG+GGG | + | Chr2:71388502-71388521 | MsG0280010553.01.T01:CDS | 45.0% | |
| TATCTACGGTTGTGTACAGC+TGG | - | Chr2:71387487-71387506 | None:intergenic | 45.0% | |
| TCACGGGAGACTTAGATCTA+CGG | - | Chr2:71387731-71387750 | None:intergenic | 45.0% | |
| TCATCCAGTAGTGTCCAAGT+TGG | + | Chr2:71389269-71389288 | MsG0280010553.01.T01:three_prime_UTR | 45.0% | |
| ! | ATTCGGGGGAACTTGATTTG+GGG | + | Chr2:71388516-71388535 | MsG0280010553.01.T01:CDS | 45.0% |
| ! | TCTGATACCTCTGAAGACTC+TGG | + | Chr2:71388563-71388582 | MsG0280010553.01.T01:CDS | 45.0% |
| ! | TGCGTTGCATTGACCATTTG+AGG | + | Chr2:71388720-71388739 | MsG0280010553.01.T01:CDS | 45.0% |
| !!! | AGTCCATGTATGTTTTGGGG+TGG | + | Chr2:71388429-71388448 | MsG0280010553.01.T01:CDS | 45.0% |
| AAAAAGCCGACGACGATGCT+TGG | + | Chr2:71388459-71388478 | MsG0280010553.01.T01:CDS | 50.0% | |
| AAAAGCCGACGACGATGCTT+GGG | + | Chr2:71388460-71388479 | MsG0280010553.01.T01:CDS | 50.0% | |
| AATGGCGTCATCTTCTTCCG+TGG | + | Chr2:71387659-71387678 | MsG0280010553.01.T01:exon | 50.0% | |
| AGGGTTATACAGGAGAGGAG+AGG | - | Chr2:71387044-71387063 | None:intergenic | 50.0% | |
| CAGCCACCCCAAAACATACA+TGG | - | Chr2:71388435-71388454 | None:intergenic | 50.0% | |
| CGCTTAGGGTTATACAGGAG+AGG | - | Chr2:71387049-71387068 | None:intergenic | 50.0% | |
| CTACGGTGTGAAACACGCTT+AGG | - | Chr2:71387714-71387733 | None:intergenic | 50.0% | |
| GGACAAGAAGAAACAGGACC+TGG | + | Chr2:71388912-71388931 | MsG0280010553.01.T01:three_prime_UTR | 50.0% | |
| GGAGAGGAACCATTTGAGGA+GGG | + | Chr2:71388584-71388603 | MsG0280010553.01.T01:CDS | 50.0% | |
| GTGGTAACTGTTGCCATCAG+AGG | - | Chr2:71387131-71387150 | None:intergenic | 50.0% | |
| TGGAGAGGAACCATTTGAGG+AGG | + | Chr2:71388583-71388602 | MsG0280010553.01.T01:CDS | 50.0% | |
| TGGGAGGTTATGGCTGAGAA+GGG | + | Chr2:71388671-71388690 | MsG0280010553.01.T01:CDS | 50.0% | |
| TTCCCCCGAATAGTCTACAG+AGG | - | Chr2:71388507-71388526 | None:intergenic | 50.0% | |
| TTCCTCTCCAGAGTCTTCAG+AGG | - | Chr2:71388573-71388592 | None:intergenic | 50.0% | |
| TTGGGAGGTTATGGCTGAGA+AGG | + | Chr2:71388670-71388689 | MsG0280010553.01.T01:CDS | 50.0% | |
| ! | AAAGGGAGGCTTTAGCGCTT+AGG | - | Chr2:71387064-71387083 | None:intergenic | 50.0% |
| ! | AAGGGAGGCTTTAGCGCTTA+GGG | - | Chr2:71387063-71387082 | None:intergenic | 50.0% |
| ! | CTCTGGAGAGGAACCATTTG+AGG | + | Chr2:71388580-71388599 | MsG0280010553.01.T01:CDS | 50.0% |
| ! | CTTATCCCAAGCATCGTCGT+CGG | - | Chr2:71388468-71388487 | None:intergenic | 50.0% |
| ! | TACCTCTGAAGACTCTGGAG+AGG | + | Chr2:71388568-71388587 | MsG0280010553.01.T01:CDS | 50.0% |
| !! | TTCGGGGGAACTTGATTTGG+GGG | + | Chr2:71388517-71388536 | MsG0280010553.01.T01:CDS | 50.0% |
| AGAGGAGAGGAGAAGAGACG+AGG | - | Chr2:71387031-71387050 | None:intergenic | 55.0% | |
| CGACGACGATGCTTGGGATA+AGG | + | Chr2:71388466-71388485 | MsG0280010553.01.T01:CDS | 55.0% | |
| CTCACACTGTGCTATCACCC+AGG | - | Chr2:71388933-71388952 | None:intergenic | 55.0% | |
| GGAGGTTATGGCTGAGAAGG+GGG | + | Chr2:71388673-71388692 | MsG0280010553.01.T01:CDS | 55.0% | |
| GGGAAGTTGGGACCAACTCA+TGG | + | Chr2:71388748-71388767 | MsG0280010553.01.T01:CDS | 55.0% | |
| GGGAGGTTATGGCTGAGAAG+GGG | + | Chr2:71388672-71388691 | MsG0280010553.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 71387028 | 71389311 | 71387028 | ID=MsG0280010553.01;Name=MsG0280010553.01 |
| Chr2 | mRNA | 71387028 | 71389311 | 71387028 | ID=MsG0280010553.01.T01;Parent=MsG0280010553.01;Name=MsG0280010553.01.T01;_AED=0.14;_eAED=0.14;_QI=632|1|1|1|1|1|2|413|226 |
| Chr2 | exon | 71387028 | 71387771 | 71387028 | ID=MsG0280010553.01.T01:exon:19396;Parent=MsG0280010553.01.T01 |
| Chr2 | exon | 71388330 | 71389311 | 71388330 | ID=MsG0280010553.01.T01:exon:19397;Parent=MsG0280010553.01.T01 |
| Chr2 | five_prime_UTR | 71387028 | 71387659 | 71387028 | ID=MsG0280010553.01.T01:five_prime_utr;Parent=MsG0280010553.01.T01 |
| Chr2 | CDS | 71387660 | 71387771 | 71387660 | ID=MsG0280010553.01.T01:cds;Parent=MsG0280010553.01.T01 |
| Chr2 | CDS | 71388330 | 71388898 | 71388330 | ID=MsG0280010553.01.T01:cds;Parent=MsG0280010553.01.T01 |
| Chr2 | three_prime_UTR | 71388899 | 71389311 | 71388899 | ID=MsG0280010553.01.T01:three_prime_utr;Parent=MsG0280010553.01.T01 |
| Gene Sequence |
| Protein sequence |
